Comparison of KIAA cDNA sequences between mouse and human (KIAA0352)

<<Original sequence data>>

mouse  mKIAA0352 (meh01314)     length:   5738 bp, CDS:     1 -  2061
human   KIAA0352  (hg01642)     length:   6170 bp, CDS:    60 -  2225

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:        -           -        -          -
  CDS:    165 -  2228    1765      295      14.3
3'UTR:   2229 -  6312    2514     1097      30.4

amino acid

  CDS:    165 -  2228     610       77      11.2
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
meh01314     1 .................................................. 1
                                                                 
hg01642      1 GAAGCGGCGGCGGCGATGGTGCTCGGGGCGCCGCAGAGCCGGATTAACTG 50

            51 ----+----*----+----*----+----*----+----*----+----* 100
meh01314     1 .................................................. 1
                                                                 
hg01642     51 TGCTGATAAGGAGGTAATTTCATAGGAGCTGCTAAGATGGGCATGAGGAT 100
                        G  G  N  F  I  G  A  A  K  M  G  M  R  I 

           101 ----+----*----+----*----+----*----+----*----+----* 150
meh01314     1 .................................................. 1
                                                                 
hg01642    101 CAAACTGCAAAGCACCAACCACCCCAACAACCTGCTGAAGGAACTCAACA 150
                K  L  Q  S  T  N  H  P  N  N  L  L  K  E  L  N  K

           151 ----+----*----+----*----+----*----+----*----+----* 200
                             E  T  M  C  D  V  T  I  V  V  G  S  
meh01314     1 ..............GAGACCATGTGCGATGTCACCATCGTGGTGGGGAGC 36
                             |||||||||||||| |||||||| ||||||||||||
hg01642    151 AGTGCCGGCTCTCAGAGACCATGTGCGACGTCACCATTGTGGTGGGGAGC 200
                 C  R  L  S  E  T  M  C  D  V  T  I  V  V  G  S  

           201 ----+----*----+----*----+----*----+----*----+----* 250
               R  S  F  P  A  H  K  A  V  L  A  C  A  A  G  Y  F 
meh01314    37 CGCTCTTTCCCCGCCCACAAAGCCGTGCTGGCGTGCGCAGCTGGCTACTT 86
               ||||| ||||| |||||||| || |||||||| || ||||||||||||||
hg01642    201 CGCTCCTTCCCGGCCCACAAGGCTGTGCTGGCCTGTGCAGCTGGCTACTT 250
               R  S  F  P  A  H  K  A  V  L  A  C  A  A  G  Y  F 

           251 ----+----*----+----*----+----*----+----*----+----* 300
                Q  N  L  F  L  N  T  G  L  D  A  A  R  T  Y  V  V
meh01314    87 CCAGAACCTCTTCTTAAACACTGGGCTAGATGCTGCGCGGACCTACGTGG 136
               ||||||||||||| | || |||||||| ||||||||  ||||||| ||||
hg01642    251 CCAGAACCTCTTCCTGAATACTGGGCTTGATGCTGCCAGGACCTATGTGG 300
                Q  N  L  F  L  N  T  G  L  D  A  A  R  T  Y  V  V

           301 ----+----*----+----*----+----*----+----*----+----* 350
                 D  F  I  T  P  A  N  F  E  K  I  L  S  F  V  Y  
meh01314   137 TGGACTTCATTACCCCTGCCAACTTTGAGAAGATCCTGAGTTTTGTATAT 186
               |||||||||| ||||||||||||||||||||| | ||||| ||||| || 
hg01642    301 TGGACTTCATCACCCCTGCCAACTTTGAGAAGGTTCTGAGCTTTGTCTAC 350
                 D  F  I  T  P  A  N  F  E  K  V  L  S  F  V  Y  

           351 ----+----*----+----*----+----*----+----*----+----* 400
               T  S  E  L  F  T  D  L  I  N  V  G  V  I  Y  E  V 
meh01314   187 ACATCAGAGCTCTTCACAGACCTGATCAACGTTGGGGTCATCTATGAGGT 236
               || ||||| |||||||||||||||||||| |||||||||||||| |||||
hg01642    351 ACTTCAGAACTCTTCACAGACCTGATCAATGTTGGGGTCATCTACGAGGT 400
               T  S  E  L  F  T  D  L  I  N  V  G  V  I  Y  E  V 

           401 ----+----*----+----*----+----*----+----*----+----* 450
                A  E  R  L  G  M  E  D  L  L  R  A  C  H  S  T  F
meh01314   237 CGCTGAACGCCTGGGTATGGAGGATCTGCTGCGAGCCTGCCATTCCACTT 286
                ||||| ||  ||||||||||||| || || |  ||||| || || || |
hg01642    401 AGCTGAGCGTTTGGGTATGGAGGACCTCCTCCAGGCCTGTCACTCTACCT 450
                A  E  R  L  G  M  E  D  L  L  Q  A  C  H  S  T  F

           451 ----+----*----+----*----+----*----+----*----+----* 500
                 P  D  L  E  S  T  A  I  A  K  S  L  T  S  T  S  
meh01314   287 TCCCAGACCTAGAGAGCACTGCAATAGCCAAGTCCTTGACCAGCACCAGC 336
               | || || || ||||||||||| |  |||||| || ||||||||||||| 
hg01642    451 TTCCTGATCTGGAGAGCACTGCCAGGGCCAAGCCCCTGACCAGCACCAGT 500
                 P  D  L  E  S  T  A  R  A  K  P  L  T  S  T  S  

           501 ----+----*----+----*----+----*----+----*----+----* 550
               D  S  Q  C  V  T  L  S  C  P  S  V  D  P  T  H  P 
meh01314   337 GACAGCCAGTGTGTCACTCTCAGTTGTCCCTCAGTAGATCCCACCCACCC 386
               || ||||| | ||  || || |||||||| || | ||| ||  |||| ||
hg01642    501 GAGAGCCACTCTGGTACCCTGAGTTGTCCTTCGGCAGAACCTGCCCATCC 550
               E  S  H  S  G  T  L  S  C  P  S  A  E  P  A  H  P 

           551 ----+----*----+----*----+----*----+----*----+----* 600
                L  G  E  S  R  G  S  G  E  H  F  G  P  D  R  N  Y
meh01314   387 CCTTGGAGAGTCCCGGGGGAGTGGGGAACACTTTGGTCCTGATAGAAACT 436
               |||||||||   ||| ||  |||||||  || ||||| ||||||||||||
hg01642    551 CCTTGGAGAACTCCGAGGTGGTGGGGACTACCTTGGTGCTGATAGAAACT 600
                L  G  E  L  R  G  G  G  D  Y  L  G  A  D  R  N  Y

           601 ----+----*----+----*----+----*----+----*----+----* 650
                 V  L  P  T  D  A  G  G  S  Y  K  E  E  E  R  S  
meh01314   437 ATGTGCTGCCTACTGATGCAGGAGGAAGCTACAAAGAGGAAGAGCGGAGT 486
               ||||| |||| | |||||| ||||| ||||| ||||||||||||  || |
hg01642    601 ATGTGTTGCCCAGTGATGCTGGAGGGAGCTATAAAGAGGAAGAGAAGAAT 650
                 V  L  P  S  D  A  G  G  S  Y  K  E  E  E  K  N  

           651 ----+----*----+----*----+----*----+----*----+----* 700
               V  S  G  D  T  N  H  G  L  P  L  -     Q  L  P  L 
meh01314   487 GTCTCGGGTGACACTAATCATGGCTTGCCCCTGCC...ACAGCTGCCACT 533
               ||  |  ||||| |||| ||| || |||  |||||   || ||  |||| 
hg01642    651 GTTGCCAGTGACGCTAACCATAGCCTGCATCTGCCGCAACCGCCCCCACC 700
               V  A  S  D  A  N  H  S  L  H  L  P  Q  P  P  P  P 

           701 ----+----*----+----*----+----*----+----*----+----* 750
                P  P  K  S  E  D  H  D  T  P  V  P  F  T  S  V  P
meh01314   534 GCCACCAAAGTCGGAAGACCACGACACCCCTGTTCCCTTCACGTCTGTTC 583
                || |||||| | |||||||| |||||||||| ||||||||||||  |||
hg01642    701 ACCGCCAAAGACAGAAGACCATGACACCCCTGCTCCCTTCACGTCCATTC 750
                P  P  K  T  E  D  H  D  T  P  A  P  F  T  S  I  P

           751 ----+----*----+----*----+----*----+----*----+----* 800
                 S  V  A  T  P  P  L     L  G  T  V  S  T  G  I  
meh01314   584 CTAGTGTGGCAACCCCACCACCAGTCCTAGGCACGGTCAGCACAGGCATC 633
               ||||  ||   ||||  ||||   |||||||||| |||||||| ||||||
hg01642    751 CTAGCATGATGACCCAGCCAC...TCCTAGGCACTGTCAGCACGGGCATC 797
                 S  M  M  T  Q  P  L     L  G  T  V  S  T  G  I  

           801 ----+----*----+----*----+----*----+----*----+----* 850
               Q  T  S  T  S  S  C  Q  P  Y  K  V  Q  S  N  G  D 
meh01314   634 CAGACCAGCACAAGTTCTTGCCAGCCATACAAAGTTCAAAGCAACGGAGA 683
               ||||||||||| || || |||||||||||||||||||||||||| |||||
hg01642    798 CAGACCAGCACGAGCTCCTGCCAGCCATACAAAGTTCAAAGCAATGGAGA 847
               Q  T  S  T  S  S  C  Q  P  Y  K  V  Q  S  N  G  D 

           851 ----+----*----+----*----+----*----+----*----+----* 900
                F  S  K  S  T  F  F  A  S  D  N  A  V  D  I  T  T
meh01314   684 CTTCAGTAAAAGCACCTTCTTTGCCTCTGATAACGCGGTAGACATTACAA 733
               ||||||||||| || |||| |  || |||| || || ||||||||||| |
hg01642    848 CTTCAGTAAAAACAGCTTCCTCACCCCTGACAATGCAGTAGACATTACCA 897
                F  S  K  N  S  F  L  T  P  D  N  A  V  D  I  T  T

           901 ----+----*----+----*----+----*----+----*----+----* 950
                 Q  T  N  S  C  L  S  N  S  D  H  S  R  D  P  S  
meh01314   734 CCCAGACCAACTCCTGTTTGAGCAATAGCGACCACTCCAGAGACCCAAGC 783
               |   ||||||||||||| |||||||||| || ||||||| ||| ||  ||
hg01642    898 CTGGGACCAACTCCTGTCTGAGCAATAGTGAGCACTCCAAAGATCCTGGC 947
                 G  T  N  S  C  L  S  N  S  E  H  S  K  D  P  G  

           951 ----+----*----+----*----+----*----+----*----+----* 1000
               F  G  Q  M  D  E  L  Q  L  D  D  L  G  D  E  D  L 
meh01314   784 TTTGGGCAGATGGATGAGCTCCAGCTGGACGACCTGGGGGACGAGGACCT 833
               |||||||||||||||||||||||||| || ||||||||||| || ||| |
hg01642    948 TTTGGGCAGATGGATGAGCTCCAGCTCGAGGACCTGGGGGATGATGACTT 997
               F  G  Q  M  D  E  L  Q  L  E  D  L  G  D  D  D  L 

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
                Q  F  E  D  P  A  E  D  I  G  T  A  E  E  V  I  E
meh01314   834 GCAGTTTGAGGACCCGGCCGAAGACATCGGGACCGCAGAGGAGGTGATTG 883
               ||||||||| ||||| || || || || || ||  | |||||||||||||
hg01642    998 GCAGTTTGAAGACCCTGCTGAGGATATAGGCACAACTGAGGAGGTGATTG 1047
                Q  F  E  D  P  A  E  D  I  G  T  T  E  E  V  I  E

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                 L  S  D  D  S  E  D  D  L  A  F  G  D  S  D  N  
meh01314   884 AGTTGAGCGACGACAGCGAGGACGACCTGGCTTTCGGTGACAGTGACAAC 933
               || |||| || ||||| ||||| ||  ||||||| || || | |||||| 
hg01642   1048 AGCTGAGTGATGACAGTGAGGATGAGTTGGCTTTTGGAGAGAATGACAAT 1097
                 L  S  D  D  S  E  D  E  L  A  F  G  E  N  D  N  

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
               R  E  N  K  A  M  P  C  Q  V  C  K  K  V  L  E  P 
meh01314   934 CGGGAGAATAAGGCCATGCCCTGCCAGGTGTGCAAGAAAGTTCTAGAGCC 983
               ||||||||||||||||||||||||||||||||||||||||||||||||||
hg01642   1098 CGGGAGAATAAGGCCATGCCCTGCCAGGTGTGCAAGAAAGTTCTAGAGCC 1147
               R  E  N  K  A  M  P  C  Q  V  C  K  K  V  L  E  P 

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                N  I  Q  L  I  R  Q  H  A  R  D  H  V  D  L  L  T
meh01314   984 CAACATTCAGCTGATACGGCAGCATGCGCGGGACCACGTAGACTTGCTCA 1033
               ||||||||| ||||| ||||||||||| |||||||| || ||| |||| |
hg01642   1148 CAACATTCAACTGATCCGGCAGCATGCTCGGGACCATGTGGACCTGCTGA 1197
                N  I  Q  L  I  R  Q  H  A  R  D  H  V  D  L  L  T

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                 G  N  C  K  V  C  E  T  H  F  Q  D  R  N  S  R  
meh01314  1034 CAGGCAACTGCAAGGTCTGTGAGACCCACTTCCAGGACCGAAACTCCCGG 1083
               | ||||||||||||||||| ||||||||||||||||||||||||||||||
hg01642   1198 CGGGCAACTGCAAGGTCTGCGAGACCCACTTCCAGGACCGAAACTCCCGG 1247
                 G  N  C  K  V  C  E  T  H  F  Q  D  R  N  S  R  

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
               V  T  H  V  L  S  H  I  G  I  F  L  F  S  C  D  M 
meh01314  1084 GTGACCCATGTCCTGTCTCACATCGGCATCTTCCTGTTTTCCTGCGATAT 1133
               || || ||||||||||| ||||| || || ||||| || |||||||| ||
hg01642   1248 GTAACTCATGTCCTGTCCCACATTGGTATTTTCCTTTTCTCCTGCGACAT 1297
               V  T  H  V  L  S  H  I  G  I  F  L  F  S  C  D  M 

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
                C  E  T  K  F  F  T  Q  W  Q  L  T  L  H  R  R  D
meh01314  1134 GTGTGAGACAAAGTTCTTCACCCAGTGGCAGCTGACCCTGCACCGGCGGG 1183
               |||||| || |||||||| |||||||||||||||||||| ||||| ||||
hg01642   1298 GTGTGAAACTAAGTTCTTTACCCAGTGGCAGCTGACCCTTCACCGACGGG 1347
                C  E  T  K  F  F  T  Q  W  Q  L  T  L  H  R  R  D

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
                 G  I  F  D  N  N  V  I  V  H  P  S  E  P  L  S  
meh01314  1184 ATGGGATATTTGATAACAACGTCATTGTCCACCCCAGTGAACCCCTGTCT 1233
               |||| |||||||| |||||| |||||||||||||||  || |||||| | 
hg01642   1348 ATGGAATATTTGAGAACAACATCATTGTCCACCCCAACGATCCCCTGCCA 1397
                 G  I  F  E  N  N  I  I  V  H  P  N  D  P  L  P  

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
               G  K  L  G  L  F  P  G  A  A  S  P  E  L  K  C  A 
meh01314  1234 GGGAAACTGGGTCTCTTTCCAGGGGCAGCCTCCCCGGAGTTGAAATGTGC 1283
               ||||| |||||||||||| |||||||||||||||| ||| ||||||| ||
hg01642   1398 GGGAAGCTGGGTCTCTTTTCAGGGGCAGCCTCCCCAGAGCTGAAATGCGC 1447
               G  K  L  G  L  F  S  G  A  A  S  P  E  L  K  C  A 

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
                V  C  G  K  A  L  A  K  D  F  H  V  V  R  C  H  I
meh01314  1284 TGTCTGTGGGAAAGCATTGGCCAAAGATTTCCACGTGGTCCGTTGCCACA 1333
               || ||||||||||| |||||||||||||||||| ||||||||  ||||||
hg01642   1448 TGCCTGTGGGAAAGTATTGGCCAAAGATTTCCATGTGGTCCGGGGCCACA 1497
                A  C  G  K  V  L  A  K  D  F  H  V  V  R  G  H  I

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
                 L  E  H  V  N  L  K  G  Q  A  C  S  I  C  D  Q  
meh01314  1334 TCCTCGAGCACGTGAACTTGAAGGGCCAGGCCTGCAGCATCTGCGATCAG 1383
               |||| || ||  | |||||||||||||||||||||||  ||||||| |||
hg01642   1498 TCCTTGACCATCTAAACTTGAAGGGCCAGGCCTGCAGTGTCTGCGACCAG 1547
                 L  D  H  L  N  L  K  G  Q  A  C  S  V  C  D  Q  

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
               R  H  L  N  L  C  S  L  M  W  H  M  L  S  H  L  G 
meh01314  1384 CGCCACCTCAACCTCTGCAGCCTCATGTGGCACATGCTCTCCCATCTGGG 1433
               || ||||| ||||||||||||||||||||||||| ||| |||||||| ||
hg01642   1548 CGTCACCTTAACCTCTGCAGCCTCATGTGGCACACGCTGTCCCATCTCGG 1597
               R  H  L  N  L  C  S  L  M  W  H  T  L  S  H  L  G 

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
                I  S  V  F  S  C  S  V  C  A  S  S  F  V  D  W  H
meh01314  1434 CATCTCAGTCTTCTCCTGTTCGGTCTGTGCCAGCAGCTTTGTGGACTGGC 1483
               ||||||||||||||||||||| |||||||| | |||||||||||||||||
hg01642   1598 CATCTCAGTCTTCTCCTGTTCTGTCTGTGCGAACAGCTTTGTGGACTGGC 1647
                I  S  V  F  S  C  S  V  C  A  N  S  F  V  D  W  H

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
                 L  L  E  K  H  M  V  V  H  Q  G  L  E  D  V  L  
meh01314  1484 ACCTTCTAGAGAAACACATGGTTGTTCACCAGGGCCTGGAGGATGTCCTC 1533
               | ||||||||||| ||||||| ||| |||||  | ||||| || | ||||
hg01642   1648 ATCTTCTAGAGAAGCACATGGCTGTGCACCAAAGTCTGGAAGACGCCCTC 1697
                 L  L  E  K  H  M  A  V  H  Q  S  L  E  D  A  L  

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
               F  R  C  H  L  C  S  Q  S  F  R  S  E  A  A  Y  R 
meh01314  1534 TTCCGTTGCCACTTGTGCAGCCAGAGCTTCCGGTCAGAGGCAGCCTACCG 1583
               ||||  |||| |||||||||||||||||||  ||||||||| ||||| ||
hg01642   1698 TTCCACTGCCGCTTGTGCAGCCAGAGCTTCAAGTCAGAGGCTGCCTATCG 1747
               F  H  C  R  L  C  S  Q  S  F  K  S  E  A  A  Y  R 

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
                Y  H  V  S  Q  H  K  C  S  S  G  L  D  A  R  P  G
meh01314  1584 CTACCACGTCAGCCAGCACAAGTGCAGCAGCGGCCTGGACGCGCGGCCTG 1633
               ||||||||||||||||||||| |||| ||| ||||| || || |||||||
hg01642   1748 CTACCACGTCAGCCAGCACAAATGCAACAGTGGCCTTGATGCACGGCCTG 1797
                Y  H  V  S  Q  H  K  C  N  S  G  L  D  A  R  P  G

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
                 L  G  L  P  H  L  A  L  Q  K  R  K  L  P  A  E  
meh01314  1634 GTCTGGGACTACCACACCTAGCCCTCCAGAAGCGGAAGCTGCCCGCCGAG 1683
               || | || || |  |||| ||| |||||||||||||||||||| || |||
hg01642   1798 GTTTTGGGCTGCAGCACCCAGCTCTCCAGAAGCGGAAGCTGCCAGCAGAG 1847
                 F  G  L  Q  H  P  A  L  Q  K  R  K  L  P  A  E  

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
               E  F  L  S  E  E  L  A  L  Q  G  Q  P  G  N  S  K 
meh01314  1684 GAGTTTCTGAGCGAAGAGCTGGCTCTGCAGGGCCAGCCTGGGAATAGTAA 1733
               ||||||||| | ||||||||||| ||||||||||| |||||||| || ||
hg01642   1848 GAGTTTCTGGGTGAAGAGCTGGCGCTGCAGGGCCAACCTGGGAACAGCAA 1897
               E  F  L  G  E  E  L  A  L  Q  G  Q  P  G  N  S  K 

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
                Y  S  C  K  V  C  G  K  R  F  A  H  T  S  E  F  N
meh01314  1734 GTACAGTTGTAAGGTCTGTGGCAAAAGGTTTGCCCACACAAGCGAGTTCA 1783
               ||| || || ||||||||||||||||| ||||||||||||||||| ||||
hg01642   1898 GTATAGCTGCAAGGTCTGTGGCAAAAGATTTGCCCACACAAGCGAATTCA 1947
                Y  S  C  K  V  C  G  K  R  F  A  H  T  S  E  F  N

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
                 Y  H  R  R  I  H  T  G  E  K  P  Y  Q  C  K  V  
meh01314  1784 ACTACCACCGGCGGATCCACACAGGCGAGAAACCTTATCAGTGCAAGGTT 1833
               |||||||||||||||||||||| || ||||| || || || || ||||| 
hg01642   1948 ACTACCACCGGCGGATCCACACGGGGGAGAAGCCATACCAATGTAAGGTG 1997
                 Y  H  R  R  I  H  T  G  E  K  P  Y  Q  C  K  V  

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
               C  H  K  F  F  R  G  R  S  T  I  K  C  H  L  K  T 
meh01314  1834 TGTCACAAATTCTTCCGAGGTCGCTCGACCATCAAGTGCCACCTCAAGAC 1883
               || ||||| ||||| ||||| ||||||||||||||||||||||| |||||
hg01642   1998 TGCCACAAGTTCTTTCGAGGCCGCTCGACCATCAAGTGCCACCTAAAGAC 2047
               C  H  K  F  F  R  G  R  S  T  I  K  C  H  L  K  T 

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
                H  S  G  A  L  M  Y  R  C  T  V  C  G  H  Y  S  S
meh01314  1884 GCATTCAGGGGCGCTCATGTACCGCTGCACAGTCTGCGGCCACTACAGTT 1933
                || || ||||| ||||||||||||||||||||||| || ||||||||||
hg01642   2048 ACACTCGGGGGCCCTCATGTACCGCTGCACAGTCTGTGGGCACTACAGTT 2097
                H  S  G  A  L  M  Y  R  C  T  V  C  G  H  Y  S  S

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
                 T  L  N  L  M  S  K  H  V  G  V  H  K  G  S  L  
meh01314  1934 CCACCCTTAACCTCATGAGTAAACACGTCGGGGTGCACAAAGGCAGCCTT 1983
               ||||||||||||||||||| ||||| || || ||||||||||||||||| 
hg01642   2098 CCACCCTTAACCTCATGAGCAAACATGTTGGTGTGCACAAAGGCAGCCTC 2147
                 T  L  N  L  M  S  K  H  V  G  V  H  K  G  S  L  

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
               P  P  D  F  T  I  E  Q  T  F  M  Y  I  I  H  S  K 
meh01314  1984 CCCCCTGACTTCACCATCGAGCAGACCTTCATGTACATTATACATTCCAA 2033
               |||||||||||||||||||||||||||||||||||||| || ||||||||
hg01642   2148 CCCCCTGACTTCACCATCGAGCAGACCTTCATGTACATCATCCATTCCAA 2197
               P  P  D  F  T  I  E  Q  T  F  M  Y  I  I  H  S  K 

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
                E  A  E  K  N  P  D  S  *                        
meh01314  2034 AGAGGCTGAGAAGAACCCGGACAGCTGACTGGGTCCCAGCAGAGTCAGAG 2083
               |||||| || |||||||||||||| |||||||||||| |||||| ||  |
hg01642   2198 AGAGGCGGATAAGAACCCGGACAGTTGACTGGGTCCCGGCAGAGCCACGG 2247
                E  A  D  K  N  P  D  S  *                        

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
meh01314  2084 GGAGCTCCCAGGTGGCAGCCGGGATAGTGACTTTGTAAAGGCCGTTGGTC 2133
               |||||||||| |  |||||| ||||  ||| | | |||  |  |||||||
hg01642   2248 GGAGCTCCCAAGCAGCAGCCAGGATGCTGA.TATCTAAGAGGTGTTGGTC 2296

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
meh01314  2134 CTCCCCCCGCTGACGCTA.CAGCTTGCCTTG.............TGTGTG 2169
               |  |||| ||||| | ||  |  ||||||||             | ||||
hg01642   2297 CCTCCCCAGCTGAAGTTATAATTTTGCCTTGGTAGGAATTCTGTTCTGTG 2346

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
meh01314  2170 TTGTGTTGA...........GAGAAGAAATGGCACACAAGCTGTTACTGT 2208
               ||||||| |            ||||||||| ||||| |||||||||||||
hg01642   2347 TTGTGTTTAAAGAAGAAAAGAAGAAGAAATAGCACATAAGCTGTTACTGT 2396

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
meh01314  2209 TCTTGAGAGGCGGCACCGCTGTTACATTTACCTCCGTACCTGTTGTTGCC 2258
               | |||||| ||  || | || | |||||||||||| |||||||| |||||
hg01642   2397 TGTTGAGAAGCAACAGCCCTATCACATTTACCTCCATACCTGTTCTTGCC 2446

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
meh01314  2259 CGCAGAGGGCTGCGTCTTGGATGATTTCGAGGCTGGCTTTAGGATCTAGT 2308
               |    ||||||  || ||  ||  ||| |||||||| ||| |||||||||
hg01642   2447 CATGCAGGGCTATGTTTTTCATTCTTTTGAGGCTGGTTTTGGGATCTAGT 2496

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
meh01314  2309 CAAG.TGGCCGTGTTAACTAGGTCCCCTTTGCCGGTTTCTCTAGTTTTAG 2357
               ||||  |   ||||  |||||  ||||||  || |  |||||||||||||
hg01642   2497 CAAGCAGTTGGTGTCCACTAGACCCCCTTCCCCAGCCTCTCTAGTTTTAG 2546

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
meh01314  2358 TTTACTGATAGGTTTTATGCTGCTAAGAGTCCGACCAACAGCCTCGCTCG 2407
               |||||||||||||||||||||||||||| ||| |||||||||||| ||  
hg01642   2547 TTTACTGATAGGTTTTATGCTGCTAAGAATCCAACCAACAGCCTCACTTA 2596

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
meh01314  2408 A..............TGGGGTCTTCACTGTGGCTGCAACCGCCAGTCT.. 2441
               |               | ||| |||||||||| ||  || ||  | ||  
hg01642   2597 ACAGAGGAGGTAAAGGGAGGTTTTCACTGTGGGTGTTACTGCAGGCCTCC 2646

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
meh01314  2442 ............CAGCTGTGAG.AAGGTTTGGGATATGTGGTCATTCATA 2478
                           ||||  |||| ||| ||| ||  ||||| ||||||| |
hg01642   2647 AACTGGGATGACCAGCAATGAGAAAGATTTTGGGAATGTGATCATTCAGA 2696

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
meh01314  2479 AGGGTCTAGT.AGCAAGGCAGTTCGTTC....CCATACCCTCAGCAGGGG 2523
               |  | |  || |||| |||||| |  ||     |   |||||||||||| 
hg01642   2697 AAAGACAGGTCAGCAGGGCAGTCCCCTCAGGTTCCAGCCCTCAGCAGGGA 2746

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
meh01314  2524 CAAGGTGTCAGGAGCGGAGGGCACTCCTTGCTACACAGCTCAGATCGCCT 2573
               ||||   |||||   |  ||   || |||  |  ||||| |  |||  ||
hg01642   2747 CAAGACATCAGGGATGTTGGTGTCTGCTT.ATCTACAGCCCTAATCTGCT 2795

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
meh01314  2574 GATTGGATCGTGAAAGTCCCTTGGCAGCTAGATCCAAATTGGGGACCGAG 2623
               ||||| |  |||||| ||  |||||||||||||||| | | || || |||
hg01642   2796 GATTGAACAGTGAAAATCTTTTGGCAGCTAGATCCATACTAGGCACAGAG 2845

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
meh01314  2624 CTTTCTGTTTAGGTTGGAAAGCTTT......................... 2648
               |||||| |||||||  |||||||||                         
hg01642   2846 CTTTCTATTTAGGTCAGAAAGCTTTGGGATGAACCCCTGCCAGCCAGAAG 2895

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
meh01314  2649 GGGTATCCCCTGGTGCCACCAGACGGGGCAGCCTGGATGGATGGAAGAAG 2698
               |||| |||    ||||||||||| | |||||||||||||||  | |||  
hg01642   2896 GGGTGTCCTGCAGTGCCACCAGAAGTGGCAGCCTGGATGGACAGGAGA.. 2943

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
meh01314  2699 GGCTCCACCTTTCTCCTCATTTCCAAAGAAACACGGTTTTGTAGAGTGAG 2748
               || | | | |||||||||||||||||||||||| | |||| | |||||| 
hg01642   2944 GGTTTCTCTTTTCTCCTCATTTCCAAAGAAACAGGATTTTATGGAGTGAT 2993

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
meh01314  2749 AACCCTTGATGTCAAACCTTCTGTCAAGAGCAGGGAGGACAGAGAGCCAC 2798
                 |||  || |||   ||||||||   | |||| ||||| || || ||||
hg01642   2994 GGCCCGGGACGTCCGGCCTTCTGT..GGGGCAGAGAGGATAGGGAACCAC 3041

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
meh01314  2799 CTCAGTGTAGCCGTCTGCCATCTGGCTACCTC.CTTAACCTTGCGTCTCC 2847
                |   | ||| | ||||   | |||| || ||  ||  || || || || 
hg01642   3042 TTTGATATAGTCATCTG..TTTTGGCCACTTCTGTTGGCCATGAGTGTCT 3089

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
meh01314  2848 CTGT...CACGGAGAGGTGTCTCAGACAGCAGCAGTCTTGCCTTAATTTA 2894
                 ||    | |  | | ||| || ||||||||||| ||||||||||||||
hg01642   3090 TGGTGGAGAGGTGGGGATGTATCTGACAGCAGCAGCCTTGCCTTAATTTA 3139

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
meh01314  2895 CACCGAGTCTCCCACTCAGGATGGTTTGACCTACAGTGCAGATGAGAAGA 2944
                | |  |||||||   ||| |  ||||| ||    ||| |||||||  ||
hg01642   3140 TATCTGGTCTCCCGTCCAGAAGTGTTTGGCCCGTGGTGTAGATGAGCTGA 3189

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
meh01314  2945 CCATGTGAGTTTGTGGTG.....GATCACAAGCCCTTCTGGATTAAAGGA 2989
               |    |||  | |||| |     || | | |||||||| |||||||||| 
hg01642   3190 CTCCATGAAGTGGTGGAGTGGCAGACCGCGAGCCCTTCAGGATTAAAGGG 3239

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
meh01314  2990 ACCCAAGTAACTTGGTGGTACATAGCAGGGTGTGCATTCTGA....CTGT 3035
               |||  |||||| |||||||   ||||||||||||| ||||||    ||||
hg01642   3240 ACCTGAGTAAC.TGGTGGTGTGTAGCAGGGTGTGCGTTCTGACTGTCTGT 3288

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
meh01314  3036 CCTAGTTGGGTGACTTGTTTACT...TGGTAACAGTGTGGGAG.TTTGGC 3081
               |||||| |||| || ||||||||   || ||||||||  |||| |||| |
hg01642   3289 CCTAGTCGGGTAACCTGTTTACTTTGTGCTAACAGTGCCGGAGCTTTGTC 3338

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
meh01314  3082 AGTTCACCTTTGACCTGCTGGAA.TTATCCTGATCTGTCATTG.CATCAC 3129
               || |||||||||||||||||||| ||||||||||||||| ||| ||||||
hg01642   3339 AGCTCACCTTTGACCTGCTGGAATTTATCCTGATCTGTCGTTGCCATCAC 3388

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
meh01314  3130 CCCCAGGGGGCGCTCTTGGATGGTAGCTGGCTTAGGCC............ 3167
               | |||||||||||| |||||||| |||||| | |||||            
hg01642   3389 CTCCAGGGGGCGCTATTGGATGGCAGCTGGTTCAGGCCCTCCGTGGGTGG 3438

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
meh01314  3168 ....................TCCCACGCAGCTGTTTGGCTCCATTCTTA. 3196
                                    |||||||||||| || |||||| ||||| 
hg01642   3439 CTGCAGAGTGTGCCGGCACAGCCCACGCAGCTGGTTAGCTCCACTCTTAC 3488

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
meh01314  3197 ...GTCTATGAAAGGGTCTTACCCAGAAAAGGCT....GGAGAGGACCCT 3239
                  || |   || |||  || |||| | ||| ||    ||| ||| ||||
hg01642   3489 TTGGTTTTCTAAGGGGCTTTGCCCAAAGAAGTCTTGAGGGATAGGGCCCT 3538

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
meh01314  3240 TAATCTTGCATACTTATAAGGCGGCACTCCAGTAGCTCATACTACCTCAC 3289
                 ||||||||||||| | ||| | |||  |||||||||||||||||||||
hg01642   3539 CGATCTTGCATACTTGTGAGGTGCCACCTCAGTAGCTCATACTACCTCAC 3588

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
meh01314  3290 CCTGCTCAGGTGAGCTCTAAGAGTCCCTAATTTTGGGCCCAGCCACTGCC 3339
               ||||||||||||||||||  ||||||||     |  |||| | |||||| 
hg01642   3589 CCTGCTCAGGTGAGCTCTGGGAGTCCCT.GGCCTCAGCCCTGGCACTGC. 3636

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
meh01314  3340 CCCTGGTGGGACTCAGCAGCGCTCTGGGCTGTTTCATAAGCAAGTGGTTT 3389
               ||||||||||| |||||| | | | ||||||||||| |||||||||||||
hg01642   3637 CCCTGGTGGGATTCAGCAACACCCCGGGCTGTTTCACAAGCAAGTGGTTT 3686

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
meh01314  3390 TAATTAACTCACAAAGCCTTTCTAGACATTAATATTTATTTTATTATTAT 3439
               | ||||||||||||||||||| | ||||||||||||||            
hg01642   3687 TCATTAACTCACAAAGCCTTTTTGGACATTAATATTTA............ 3724

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
meh01314  3440 TTTTTTGTTTTGTTTGGTATACATACTACCCAGCATCTCTTTTCAATAAG 3489
                ||| | |||  ||| ||||||| | |||||||||||||||||  |||||
hg01642   3725 .TTTATTTTTGTTTTTGTATACACATTACCCAGCATCTCTTTTGTATAAG 3773

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
meh01314  3490 TGACTTTAGGAAAATTAGTTTCTCTCAAGCAAGGAGCCACATTCCAACGA 3539
                |||||||||||||| |||||||| | |||||| ||||| ||||||  ||
hg01642   3774 AGACTTTAGGAAAATGAGTTTCTCCCCAGCAAGTAGCCATATTCCAGAGA 3823

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
meh01314  3540 AGGGTTACGTCTGAGGAGAGGAAGA..CAGGGGTGTAAGCAGGAGAGAGT 3587
               |  |    | |    ||   | |||  ||||||| |||  | | ||    
hg01642   3824 ACAGCCTTGACCAGAGATGTGGAGAACCAGGGGTATAACTAAGGGAAGAC 3873

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
meh01314  3588 ATGCCAGGCCTTTTAAGCAGCAGTTTCTCCCAGTGTACTCTCTAGCAGAA 3637
               ||| || ||| || |   |    ||  || |    |  ||||||||| ||
hg01642   3874 ATGTCAAGCCCTTAAGCAAATTCTTCTTCTCCAGATTGTCTCTAGCATAA 3923

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
meh01314  3638 CAAACCCAGG.......TCAGTCACAGGAAGAAGGTTTTTGCACAGTTTT 3680
                |||||||||       | || |   ||  | | ||| |   |   |   
hg01642   3924 TAAACCCAGGGAACACTTTAGGCCATGGGTGTATGTTCTATAAAGTTCGG 3973

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
meh01314  3681 ATCCTTCTGACACAAGGAGCCTCCTATACATATATATATGTGTGTGTGTG 3730
                 |  |   |  | |||    || |   | |   |   ||||   | || 
hg01642   3974 GACAGTTAAATTCCAGGCCTTTCATCCCCCTTCCTTCCTGTGATGGAGTA 4023

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
meh01314  3731 TATACATACATATATGTATGTATACATATATATATATATGTGTGTGTGTA 3780
                ||           |  | |   |||                   |||  
hg01642   4024 GATTGGGGACAGGGTTGAGGGGAACA..................AGTGAC 4055

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
meh01314  3781 TATATATATATACACACACACACACACATATACATATACATATATATAAA 3830
                  |   |  ||    ||||       |    | | |   ||| ||||  
hg01642   4056 ATGAATGACCTATTTGCACAGTTTGGAAGCCTCCTGTCTTTATTTATATT 4105

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
meh01314  3831 GACAT.AGAGGCAGACCAAAGCAGTACACAGTTGAGCCGGTCAGCGGCCT 3879
               || ||   || || ||||||||   |  |   |  | |   | ||     
hg01642   4106 GAGATGTCAGACAAACCAAAGCTCCATCCTTGTTGGACCTGCTGCTTGTC 4155

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
meh01314  3880 CTTTCCCC............GGCTGTGAGTCGGTGTGCAGGGCCTTCCCA 3917
               |    |||            | ||  |||| || ||||  |||  ||   
hg01642   4156 CCCAGCCCTGAACTGATAAAGCCTCAGAGTTGGAGTGCCTGGCTCTCTGG 4205

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
meh01314  3918 AGGG...............CCCGAATGGTGTAG.CTCGAGTAGTTGAGGA 3951
                |||                  || | ||  ||   | |||      |  
hg01642   4206 TGGGGTGACCATTAGATGAAGGGACTTGTACAGTGGCCAGTTTAAAGGTC 4255

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
meh01314  3952 TACCCCTCACCATCTAAACGAGGCATTTTCAGGG................ 3985
                |||  | |||||||||||    | | ||||| |                
hg01642   4256 CACCTTTGACCATCTAAACCCACCTTGTTCAGTGTCCTCTGAGGACATCC 4305

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
meh01314  3986 ....AAGTCAGTCGTTGCTGTAGCTTTTAGTGTCTGACTCG......... 4022
                    ||  |  |  || ||   || ||  |  |||||| |         
hg01642   4306 TCATCAGGAAAGCAGTGTTGAGACTCTTCATTGCTGACTGGCTTCTCCCT 4355

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
meh01314  4023 ......................GAGTCTACACTGGGGATGTGTAGCACAC 4050
                                     || | ||    ||  ||||||| || ||
hg01642   4356 TTCTTACTCACACTGACCATTAGAATTTAAGAAGGAAATGTGTAACAGAC 4405

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
meh01314  4051 TACAGTTCCAGGTCTGCTGAGTTTTCTATC....CCCGCCCTCCCTCTGC 4096
               ||||||     |||||||   ||||| | |     |   ||  ||    |
hg01642   4406 TACAGTCAAGTGTCTGCTACATTTTCAAGCATGAGCAATCCCTCCCAGAC 4455

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
meh01314  4097 TGCTGCCGAGGAGTGAGCATTGACTGGTTGACTTGAGACAGGTCGCTGAG 4146
               || ||  ||||| |||   ||||   | ||   ||||| |||| |     
hg01642   4456 TGTTGGTGAGGACTGATTTTTGAAATGCTGGTGTGAGAGAGGTGGTAATT 4505

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
meh01314  4147 AGTGGA...................................GAAACCCCC 4161
               |  |||                                   || |  || 
hg01642   4506 ACAGGAACCAGCCGAGTGGCTGAGAGCAGATAAATGTGCTGGAGAAACCT 4555

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
meh01314  4162 TTGTCCTTAGCGTAAGGCATCTCGGATGCTGGGTAGTCTGTGTACTTAAC 4211
               || |||||| |  | ||||||  ||||||||||| |||||||||||||||
hg01642   4556 TTTTCCTTAACAGAGGGCATCATGGATGCTGGGTGGTCTGTGTACTTAAC 4605

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
meh01314  4212 CTGAAACTGTGAAGTTTTCCCTTTTTGCCA.TAAACCAAAAGGCAGATCT 4260
               |||||||||||||||||||||||||||||| |||||||||| ||||||| 
hg01642   4606 CTGAAACTGTGAAGTTTTCCCTTTTTGCCAGTAAACCAAAAAGCAGATCC 4655

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
meh01314  4261 TTGAGGTTTTGCCCTTGAAACATTAAAACACAAACTGTATTTTCTGATCC 4310
               ||||   || ||||||||||||  |||    |||||| ||   |||||||
hg01642   4656 TTGAAACTTGGCCCTTGAAACACGAAACAGAAAACTGCATCCCCTGATCC 4705

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
meh01314  4311 CTTCAGG......TTAATTGATCAGGGAGGTCCAGTTGGTCCCAGTCAGA 4354
               |    ||         ||||||||||| ||  ||||||||||||||||||
hg01642   4706 CCCGGGGGCTGATCAGATTGATCAGGGTGGCTCAGTTGGTCCCAGTCAGA 4755

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
meh01314  4355 CATGTAGCAATTGGGACCAGTAGCTCACAAGGCTTGTTGCCCAAACCATA 4404
                | ||      | ||| ||||||||||  ||  |||||| ||||||| | 
hg01642   4756 TACGT....CATAGGATCAGTAGCTCATGAGATTTGTTGACCAAACCCTC 4801

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
meh01314  4405 TCTCTTCCGGTAGCCCCATGTTTCCTCTCTG................... 4435
               || ||   |||  ||||    |||    |||                   
hg01642   4802 TCCCTGTTGGTGACCCCTGTATTCACACCTGAACTTCCCGTTTCCCCCCA 4851

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
meh01314  4436 ......TGAAGTTGTATTTGCTTCC.CTGCAGTTAGTTCCTCCT...... 4472
                       ||||  | | ||||||| ||||    || ||  |||      
hg01642   4852 CCCCACCAAAGTCATGTCTGCTTCCTCTGCCTCCAGCTCACCCTCTTCTG 4901

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
meh01314  4473 ................................GAGGGCACTCCGGGACAC 4490
                                               |||||||| | |||| ||
hg01642   4902 AATGGTTTTGCTTGAAACACTATATTGTGGCAGAGGGCACCCTGGGATAC 4951

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
meh01314  4491 CTGGTGGGAGGAGTTAACTTTATTTTGCATTTTTA.........ACTTTA 4531
               ||||| | |||  || | |||||||||||||||||         ||||| 
hg01642   4952 CTGGTAGAAGGTATTCATTTTATTTTGCATTTTTAATTGTTTTGACTTTC 5001

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
meh01314  4532 CACCCATTTGAGTTCATCCCCACCCCCACCCTTGGATTCCCGTTTGGCAC 4581
                   ||||||| ||  |   | ||| | | | ||||  |  ||||   ||
hg01642   5002 TGTTCATTTGATTTTGT.TGCTCCCTCTCTCCTGGAACCTAGTTTACTAC 5050

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
meh01314  4582 TATCCCCTGTTGTATTGCTGTAGAGCTCT.....CCTTGACCTTCATCTT 4626
               | ||  ||||  || | ||| ||  || |     |||||| | || ||||
hg01642   5051 TCTCTTCTGTGTTACT.CTGAAGTTCTGTTTAAGCCTTGAACATCCTCTT 5099

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
meh01314  4627 TGCCTGCCCCCCCCCCCCACTCCCACCCCCACCCCCGCCACTACCGCTCC 4676
                 ||                                              
hg01642   5100 CTCC.............................................. 5103

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
meh01314  4677 CTATTTTTGTTTTTGTTTTTGTTTTTTTTTGGTCTACACTTAGAGCCAGC 4726
                                      |||| ||||| |  ||| ||  |||||
hg01642   5104 .....................CATTTTCTTGGTATGTACTCAGGACCAGC 5132

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
meh01314  4727 T..GTACAGTGTTCAGAACTTTTGTTCAGCAATTCTTAGGATTGTCCAGT 4774
               |   |    |||  ||  || || ||||  |||| |||  | | || || 
hg01642   5133 TACATCATTTGTGGAGCCCTCTTATTCATAAATTATTAAAAATTTCAAGG 5182

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
meh01314  4775 TGGCTATTTGCAGAACATTAAGCCAGACTCGGGGACATCCCTAGCTTGTT 4824
               ||| |  |   ||| |||||| ||| |   | || ||| || | ||||||
hg01642   5183 TGG.TGGTCATAGAGCATTAAACCAAATATGAGGCCATTCCCAACTTGTT 5231

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
meh01314  4825 TCCTAAGGGGAAACT.GTAATGTTGATGTGGCACACTGGCATTAACAGCC 4873
               | |  |||||||| | |||||  |  |||||||| | ||  | |||||| 
hg01642   5232 TTCCGAGGGGAAAATGGTAATACTTGTGTGGCACCCGGGGTTAAACAGCA 5281

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
meh01314  4874 TGTGCTGCTTGTGGCCAGAGGATAAGATGTGTCCACATGTGCTGGTGTCC 4923
                  ||| | ||||||||||||   ||||  ||   |  |  ||   ||  
hg01642   5282 GAGGCTCCATGTGGCCAGAGGCAGAGATTAGTATCCTGGCACTCCAGTGA 5331

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
meh01314  4924 CTGACAG.....CTCCGTGACGCCACGG...ACGTCAGATAGCCCTACTC 4965
               |  || |     |||  ||| ||||| |    ||  ||  ||| || |  
hg01642   5332 CCCACTGGGTGACTCACTGATGCCACAGCACCCGCTAGGAAGCTCTGC.. 5379

          5501 ----+----*----+----*----+----*----+----*----+----* 5550
meh01314  4966 AATGAACCCCAGGATTTGGTTCTAAATTTTAAGGTTCTGTGGAGCTCCCA 5015
                 ||||||  || ||||||| |||||||||| |  ||  ||||| |||| 
hg01642   5380 ..TGAACCTTAGTATTTGGTCCTAAATTTTATGACTCCATGGAGTTCCCG 5427

          5551 ----+----*----+----*----+----*----+----*----+----* 5600
meh01314  5016 CAGTTTAT.GCTAGTCGGGGAATAAAGAGGTATTGGTGGGGTCAGG.... 5060
                |||  || ||||||  || |  || |||||       ||||||||    
hg01642   5428 TAGTCCATGGCTAGTTAGGAAGAAAGGAGGTGGGATAAGGGTCAGGCCCA 5477

          5601 ----+----*----+----*----+----*----+----*----+----* 5650
meh01314  5061 ...TGACCCTAAGAACAAGG.CATGGGTGAGAATTTCTCTTACT...... 5100
                     |||||||||| |||  |||||| | | ||| | ||  |      
hg01642   5478 GGTGACCCCTAAGAACCAGGAGATGGGTAAAAGTTTTTTTTTATATTCTG 5527

          5651 ----+----*----+----*----+----*----+----*----+----* 5700
meh01314  5101 TTATTGTGACCTATCCCCAGCCCCGTGTGTACCGGGCAAACCTGTAAACC 5150
                | || ||| || |    | |    ||| | | || ||||||| |   | 
hg01642   5528 CTTTTCTGATCTGTGAGTACCTGTTTGTCTCCAGGCCAAACCTTTGGGCT 5577

          5701 ----+----*----+----*----+----*----+----*----+----* 5750
meh01314  5151 CCAGAGCTTTTCGCCCAGGCAGGGCTTTGCTACTG....ATTATCTTCCT 5196
                 |     |||  || || ||||  ||||||| ||    ||| ||||| |
hg01642   5578 TAAATATCTTTTTCCTAGACAGGTTTTTGCTAGTGTTGAATTTTCTTCTT 5627

          5751 ----+----*----+----*----+----*----+----*----+----* 5800
meh01314  5197 TTTCTGGCTTCCTGCTGTGCTTTCTCCACCAGACCCGAGACCACTCAACT 5246
                 |||||| |||| ||||||    | | |||  ||| ||||  || ||||
hg01642   5628 CCTCTGGCCTCCTTCTGTGCCCCTTTCCCCAAGCCCAAGACTGCTTAACT 5677

          5801 ----+----*----+----*----+----*----+----*----+----* 5850
meh01314  5247 CTGAAAGTGAATTTAAATCCCTTTACAGATGGACAGTGAATTTGTTGGCA 5296
                  ||||  ||           ||  |||| |||| || |||| |||| |
hg01642   5678 TCCAAAGCAAA...........TTCTAGATAGACACTGTATTTATTGGTA 5716

          5851 ----+----*----+----*----+----*----+----*----+----* 5900
meh01314  5297 TGGGAACGAGCCCTATGGAGTGGTCTCTGTCTGTCTGTCTGGGAGTGTGT 5346
               |||||  | || |||||| ||||||    |    |  ||||||| | | |
hg01642   5717 TGGGAGTGGGCTCTATGGGGTGGTC....TGCACCCATCTGGGACTCTTT 5762

          5901 ----+----*----+----*----+----*----+----*----+----* 5950
meh01314  5347 TC...ACGTCCCAGTCCCATTGGGTGAGTCAGAAATCGGGTGCACAGCAT 5393
               ||   |  |||    || | || || ||   ||    |||||||||||||
hg01642   5763 TCCCTAAATCCTGCACCAAATGAGTCAG...GAGGCAGGGTGCACAGCAT 5809

          5951 ----+----*----+----*----+----*----+----*----+----* 6000
meh01314  5394 CCATCTCGGTGTGATGACGCGTCACA..GTCAATGTCAAGAGGAAGATGG 5441
                  | ||  |||| | | || ||| |   | ||  |||  | ||| ||| 
hg01642   5810 TAGTTTCAATGTGGTTATGCATCATAAGCTTAACATCAGAATGAAAATGA 5859

          6001 ----+----*----+----*----+----*----+----*----+----* 6050
meh01314  5442 CACCTGTGGCAGCGATCCTGATATTTTCCTTCTGCCGGTC......CCCA 5485
                ||  |     |   |     ||    |||||  | |  |      | | 
hg01642   5860 AACTCGATTTTGATGTTTCTTTAAAACCCTTCCCCTGTCCAATCCACTCG 5909

          6051 ----+----*----+----*----+----*----+----*----+----* 6100
meh01314  5486 CCCACCCTGCCCGGAGTAGCTCAAGTCTCTTCTGAAGCAGAGAAACGTTG 5535
               ||  |||  ||  || ||||| ||||||||| |||| |||||||  ||||
hg01642   5910 CCGCCCCCACCTTGAATAGCTAAAGTCTCTTATGAAACAGAGAAGAGTTG 5959

          6101 ----+----*----+----*----+----*----+----*----+----* 6150
meh01314  5536 CT...GTCTAACTCCTTCCATTAAATTAAGAAGTACTGACCTCCTAATAT 5582
                |   |||||||||||||||||||||||| ||||||||||||||||||||
hg01642   5960 TTGACGTCTAACTCCTTCCATTAAATTAATAAGTACTGACCTCCTAATAT 6009

          6151 ----+----*----+----*----+----*----+----*----+----* 6200
meh01314  5583 TTAAGTGTTTACTATC...TGCTGTAAAGTTTTGTATATTTTGTAAACCT 5629
               ||||||||||||||||   ||||||||||||||||||||||||||||| |
hg01642   6010 TTAAGTGTTTACTATCTATTGCTGTAAAGTTTTGTATATTTTGTAAACTT 6059

          6201 ----+----*----+----*----+----*----+----*----+----* 6250
meh01314  5630 TTTTCCCCAAAACAGTAGACATCTAAAATC...GTACATCTGATTCTTTT 5676
               |||||||| ||| ||||||  |||||||||   |||||||||||||||||
hg01642   6060 TTTTCCCC.AAATAGTAGATGTCTAAAATCATTGTACATCTGATTCTTTT 6108

          6251 ----+----*----+----*----+----*----+----*----+----* 6300
meh01314  5677 ATATTCCATTGTTCAGCACAAAGTGTGGTTTTTATTTAGAATAAAAAAAG 5726
               ||||||||||||||||||||||||||||||||||||||||||||||||||
hg01642   6109 ATATTCCATTGTTCAGCACAAAGTGTGGTTTTTATTTAGAATAAAAAAAG 6158

          6301 ----+----*-- 6312
meh01314  5727 AAACAGACAGAG 5738
               |||     |  |
hg01642   6159 AAATTTGAAATG 6170