FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0852.ptfa, 1035 aa vs ./tmplib.26680 library 1767982 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 10.2105+/-0.00875; mu= -5.9406+/- 0.581 mean_var=416.7862+/-100.645, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.0628 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0136 ( 984 res) mng12175 ( 984) 439 55 7.3e-08 >>mKIAA0136 ( 984 res) mng12175 (984 aa) initn: 777 init1: 248 opt: 439 Z-score: 233.5 bits: 54.7 E(): 7.3e-08 Smith-Waterman score: 854; 26.022% identity (31.567% ungapped) in 1076 aa overlap (6-1033:43-977) 10 20 30 mKIAA0 RLIAVMAFTNYSSLNRAQLTFEYLHTNSTTHEFLF :: ... . : ..::::::.: . : mKIAA0 SGRGVEARGGLVASQSGCGRGRSWLCSSLKMAAQPPTGIRLSALCPKFLHTNSTSHTWPF 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA0 GALAELVDNARDADATRIDIYAERREDLRGGFMLCFLDDGAGMDPSDAASVIQFGKSAKR .:.:::.::: : :.. .:. .. . . : : :.: :: . ....:: : : mKIAA0 SAVAELIDNAYDPDVNAKQIWIDKTV-ISDHICLTFTDNGNGMTADKLHKMLSFGFSDKV 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA0 TPES-TQIGQYGNGLKSGSMRIGKDFILFTKKEDTMTCLFLSRTFHEEEGIDEVIVPLPT : .. . .: ::::.::::::.::: ..:::. .::. :::.:. : ..:.::. : mKIAA0 TMNGHVPVGLYGNGFKSGSMRLGKDAMVFTKNGETMSVGFLSQTYLEVIKAEHVVVPIVT 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA0 WNARTREPITDNVEKFAIETELVYKYSPFHTEEQVMNQFMKIPGNSGTLVIIFNLKLMDN .: . :. : :. . . ..: : ::.... .. : :..:: .::.::. . : mKIAA0 FN-KHRQMI--NLTESKASLAAILEHSLFSTEQKLLAELNAIMGKKGTRIIIWNLRSYKN 200 210 220 230 240 220 230 240 250 mKIAA0 GEPELDIISNPKDIQMAETSPE-----GTKPERR----------SFRAYAAVLYIDPRMR . :.:. .. ::.. : : : : ..: :.::: ..::. :::. mKIAA0 AT-EFDFEKDKYDIRIPEDLDETAGRKGYKKQERMDQIAPESDYSLRAYCSILYLKPRMQ 250 260 270 280 290 300 260 270 280 290 300 310 mKIAA0 IFIHGHKVQTKRLSCCLYKPRMYKYTSSRFKTRAEQEVKKAEHVARIAEEKAREAESKAR :.:.:.::.:. .: : . :..: . . mKIAA0 IIIRGQKVKTQLVSKSL--------------AYIERDVYRPKF----------------- 310 320 330 320 330 340 350 360 370 mKIAA0 TLEVRMGGDLTRDSRVMLRQVQNTAITLRREADVKKRIKDAKQRALKEPKELNFVFGVNI ::: :. .:: : mKIAA0 ---------LTRTVRI--------------------------------------TFGFNC 340 380 390 400 410 420 430 mKIAA0 EHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACGGVVGVVDVPYLVLEPTHNKQDFADAK ...: :...:. .:::: ::::: ::... ::::... .: .:::::::: .. mKIAA0 RNKDHYGIMMYHKNRLIKAYEKVGCQLKANNMGVGVVGIIECNFL--KPTHNKQDFDYTN 350 360 370 380 390 400 440 450 460 470 480 490 mKIAA0 EYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSELRFKRRRAMEIP ::: . :.::.: .::... . . : . : . .. ..: . mKIAA0 EYRLTILALGEKLNDYWNEMKVKK---------------NAEYPVNLPVEDIQKRPDQ-- 410 420 430 440 450 500 510 520 530 540 550 mKIAA0 TTIQCDLCLKWRTLPFQLSSVETDYPDTWVCSMNPDPEQDRCEASEQKQKVPLGTLKKDP : .::: ::::: :: .... :. : :: ::::. ::. :. . : : mKIAA0 TWVQCDACLKWRKLPDGIDQL----PEKWYCSNNPDPQFRNCEVPEEPEDEDL----VHP 460 470 480 490 500 560 570 580 590 600 610 mKIAA0 KTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTT-RPIEEPVRRPQRPR .. .: :..: .: : : . : . : . . . :..: : ::. . mKIAA0 TYEKTYKKTSKERFRIRQP--EILPRILPQINPELLYQTSVSSQSFSPVKESVPRPHLSE 510 520 530 540 550 560 620 630 640 650 660 mKIAA0 -SPPLPAVIKNAPSRPPSIQTPRPSTQLRKTSVIS---------LPKPPTTAARGETSTS . :. : : : :. . :. :.. :: .: : : .::. :.:. mKIAA0 VTSPFAARIINLNLASPASE-PENSSMKRKLGVHSSILNAKTRRLSNPPV-----ENSSY 570 580 590 600 610 670 680 690 700 710 720 mKIAA0 RLLQPTEAPRKPANPPIKTVPRPTPPVHTPPLSLIPSSKSLREVPAQKAIKTPVVKKPEP . . .. : ..:.:. ... . : .: : :..:.. .:..:.: mKIAA0 KNDDDEDVIILEEN----STPKPAVDLEVKSDIEVKSEQSHTE---QSGIHVDLVSSPKP 620 630 640 650 660 730 740 750 760 770 mKIAA0 PVKQSVATSGRKRS---LAVSDEEEA------EEEAEKRRERCKRGKLAVKEEKKEANEL :. : .... .:: ..:: . .: .::. .. . : ... :: .. mKIAA0 CVQASSTSTSTSRSDPGITVSTQTDAPGLTVKKEESMEEDMGVRNGTATLSCVGTEA-KV 670 680 690 700 710 720 780 790 800 810 820 830 mKIAA0 SDSAGEDHPAELRKAQKDKGLHVEVRVNREWYTGRVTAVEVGKNAVRWKVKFDYVPTDTT .....:. : .. :. .. . : .:. : : . . . : . ... .: mKIAA0 QETSAESVDATSHQLQELRSELLVVTQERDDYK-RQCQMFTDQIQVLQQRLLEM--NDKC 730 740 750 760 770 780 840 850 860 870 880 890 mKIAA0 PRDRWVEKGSED--VRLMKPPSPEHQSPD---TQQEGGEEEEAMVARQAVALPEPSTSDG . . ....: : :. . . .: : .: . . .: . :: :: . .. mKIAA0 VKKEKCHQSTETDAVFLLDSVNGQAESLDHLGSQYQQALQEIERLKRQCSALQQVKS--- 790 800 810 820 830 840 900 910 920 930 940 950 mKIAA0 LPIEPDTTATSPSHETIDLLVQILRNCLRYFLPPSFPIS--KKELSVMNSEELISFPLKE : . .. . :. .: .. : . .: . .. . :.:..... :. : mKIAA0 ---ECSQASCTESKSEVDEMAVQLDDVFRQLDKCTIERDQYKNEVQLLEIEKSHIHSQCE 850 860 870 880 890 960 970 980 990 1000 1010 mKIAA0 YFKQYEVGLQNLCHSYQSRAD-SRAKASEESLRTSEKKLRETEEKLQKLRTNIVALLQKV . : :: : . :. :: : :. .:: . . . ::..::.:. :: . mKIAA0 EL-QTEVE-QLKSTGQQAAADGSTASNAEEPVSYVDGE----SLKLRSLRVNVGQLLAMI 900 910 920 930 940 950 1020 1030 mKIAA0 QEDID---INTD-DELDAYIEDLITKGD :.: .: : : .: . ... . mKIAA0 VPDLDLQQVNYDVDVVDEILGQVVEQMSEISST 960 970 980 1035 residues in 1 query sequences 1767982 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:30:18 2006 done: Mon Mar 27 10:30:20 2006 Scan time: 1.070 Display time: 0.100 Function used was FASTA [version 3.4t11 Apr 17, 2002]