# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/meg00838.fasta.nr -Q ../query/mKIAA1529.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1529, 322 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920947 sequences Expectation_n fit: rho(ln(x))= 4.3780+/-0.000182; mu= 13.4510+/- 0.010 mean_var=66.6197+/-13.265, 0's: 49 Z-trim: 50 B-trim: 3084 in 1/66 Lambda= 0.157135 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148670439|gb|EDL02386.1| RIKEN cDNA 1300002K09, ( 598) 1887 436.8 5e-120 gi|26340868|dbj|BAC34096.1| unnamed protein produc ( 621) 1887 436.8 5.2e-120 gi|109730283|gb|AAI11890.1| RIKEN cDNA 1300002K09 ( 621) 1887 436.8 5.2e-120 gi|109730191|gb|AAI12409.1| RIKEN cDNA 1300002K09 ( 621) 1887 436.8 5.2e-120 gi|12836354|dbj|BAB23619.1| unnamed protein produc ( 621) 1887 436.8 5.2e-120 gi|67678213|gb|AAH97368.1| Hypothetical LOC298077 ( 621) 1758 407.5 3.3e-111 gi|148744079|gb|AAI42271.1| MGC157266 protein [Bos ( 618) 1604 372.6 1.1e-100 gi|126334124|ref|XP_001372459.1| PREDICTED: hypoth ( 641) 1410 328.7 1.9e-87 gi|149415625|ref|XP_001520426.1| PREDICTED: hypoth ( 385) 1378 321.2 2e-85 gi|221043772|dbj|BAH13563.1| unnamed protein produ ( 220) 1160 271.5 1e-70 gi|169641866|gb|AAI60523.1| LOC100145324 protein [ ( 646) 1057 248.6 2.3e-63 gi|126631988|gb|AAI34163.1| Zgc:162946 protein [Da ( 609) 1033 243.2 9.7e-62 gi|55631939|ref|XP_520132.1| PREDICTED: similar to ( 118) 661 158.1 7.6e-37 gi|55741661|ref|NP_065944.1| hypothetical protein (1646) 658 158.6 7.5e-36 gi|156224853|gb|EDO45675.1| predicted protein [Nem ( 626) 531 129.4 1.8e-27 gi|210094844|gb|EEA43018.1| hypothetical protein B ( 635) 515 125.8 2.2e-26 gi|210099370|gb|EEA47465.1| hypothetical protein B (1212) 514 125.8 4.1e-26 gi|156209702|gb|EDO30950.1| predicted protein [Nem ( 806) 491 120.4 1.1e-24 gi|210099369|gb|EEA47464.1| hypothetical protein B (1054) 490 120.3 1.6e-24 gi|210099368|gb|EEA47463.1| hypothetical protein B ( 558) 478 117.3 6.8e-24 gi|210130815|gb|EEA78485.1| hypothetical protein B ( 711) 477 117.2 9.5e-24 gi|194382720|dbj|BAG64530.1| unnamed protein produ ( 202) 457 112.1 9.2e-23 gi|190586949|gb|EDV27002.1| hypothetical protein T ( 492) 452 111.4 3.7e-22 gi|47220002|emb|CAG11535.1| unnamed protein produc ( 85) 418 102.9 2.3e-20 gi|210114725|gb|EEA62482.1| hypothetical protein B ( 610) 426 105.6 2.6e-20 gi|163774361|gb|EDQ87990.1| predicted protein [Mon (1327) 339 86.2 3.8e-14 gi|190581281|gb|EDV21359.1| hypothetical protein T ( 586) 316 80.6 8e-13 gi|156209703|gb|EDO30951.1| predicted protein [Nem ( 82) 291 74.1 1.1e-11 gi|221112003|ref|XP_002165003.1| PREDICTED: simila ( 301) 288 74.0 4.1e-11 gi|156208694|gb|EDO30124.1| predicted protein [Nem ( 229) 277 71.4 1.9e-10 gi|134025522|gb|AAI35712.1| Stra6 protein [Xenopus ( 642) 256 67.1 1.1e-08 gi|74000982|ref|XP_854286.1| PREDICTED: similar to ( 655) 255 66.8 1.3e-08 gi|149462878|ref|XP_001519239.1| PREDICTED: simila ( 302) 250 65.4 1.6e-08 gi|108742056|gb|AAI17634.1| Zgc:136689 [Danio reri ( 670) 246 64.8 5.3e-08 gi|134025024|gb|AAI35018.1| Zgc:136689 [Danio reri ( 670) 246 64.8 5.3e-08 gi|47225859|emb|CAF98339.1| unnamed protein produc ( 441) 242 63.7 7.4e-08 gi|118095557|ref|XP_413689.2| PREDICTED: similar t ( 663) 234 62.1 3.5e-07 gi|188501610|gb|ACD54733.1| stimulated by retinoic ( 655) 226 60.3 1.2e-06 gi|31873328|emb|CAD97655.1| hypothetical protein [ ( 708) 222 59.4 2.4e-06 gi|193787292|dbj|BAG52498.1| unnamed protein produ ( 476) 219 58.5 2.9e-06 gi|221042454|dbj|BAH12904.1| unnamed protein produ ( 557) 219 58.6 3.2e-06 gi|10434086|dbj|BAB14122.1| unnamed protein produc ( 560) 219 58.6 3.2e-06 gi|193787087|dbj|BAG52293.1| unnamed protein produ ( 599) 219 58.6 3.4e-06 gi|119619760|gb|EAW99354.1| stimulated by retinoic ( 599) 219 58.6 3.4e-06 gi|119619761|gb|EAW99355.1| stimulated by retinoic ( 658) 219 58.7 3.6e-06 gi|193786347|dbj|BAG51630.1| unnamed protein produ ( 667) 219 58.7 3.7e-06 gi|74733466|sp|Q9BX79.1|STRA6_HUMAN RecName: Full= ( 667) 219 58.7 3.7e-06 gi|57638510|gb|AAQ15255.2|AF370419_1 unknown [Homo ( 667) 219 58.7 3.7e-06 gi|221044342|dbj|BAH13848.1| unnamed protein produ ( 695) 219 58.7 3.8e-06 gi|221042452|dbj|BAH12903.1| unnamed protein produ ( 705) 219 58.7 3.8e-06 >>gi|148670439|gb|EDL02386.1| RIKEN cDNA 1300002K09, iso (598 aa) initn: 1887 init1: 1887 opt: 1887 Z-score: 2311.1 bits: 436.8 E(): 5e-120 Smith-Waterman score: 1887; 100.000% identity (100.000% similar) in 276 aa overlap (47-322:323-598) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::::::::::::::::::::::::::::: gi|148 ISVTKGVWVVTILPAALTCVTYLFHILACYRKHMKRLWAGDKHFLPQKFHSPSSAASVVA 300 310 320 330 340 350 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV 360 370 380 390 400 410 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL 420 430 440 450 460 470 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK 480 490 500 510 520 530 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL 540 550 560 570 580 590 320 mKIAA1 LTCSDC :::::: gi|148 LTCSDC >>gi|26340868|dbj|BAC34096.1| unnamed protein product [M (621 aa) initn: 1887 init1: 1887 opt: 1887 Z-score: 2310.9 bits: 436.8 E(): 5.2e-120 Smith-Waterman score: 1887; 100.000% identity (100.000% similar) in 276 aa overlap (47-322:346-621) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::::::::::::::::::::::::::::: gi|263 ISVTKGVWVVTILPAALTCVTYLFHILACYRKHMKRLWAGDKHFLPQKFHSPSSAASVVA 320 330 340 350 360 370 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV 380 390 400 410 420 430 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL 440 450 460 470 480 490 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK 500 510 520 530 540 550 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL 560 570 580 590 600 610 320 mKIAA1 LTCSDC :::::: gi|263 LTCSDC 620 >>gi|109730283|gb|AAI11890.1| RIKEN cDNA 1300002K09 gene (621 aa) initn: 1887 init1: 1887 opt: 1887 Z-score: 2310.9 bits: 436.8 E(): 5.2e-120 Smith-Waterman score: 1887; 100.000% identity (100.000% similar) in 276 aa overlap (47-322:346-621) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::::::::::::::::::::::::::::: gi|109 ISVTKGVWVVTILPAALTCVTYLFHILACYRKHMKRLWAGDKHFLPQKFHSPSSAASVVA 320 330 340 350 360 370 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV 380 390 400 410 420 430 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL 440 450 460 470 480 490 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK 500 510 520 530 540 550 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL 560 570 580 590 600 610 320 mKIAA1 LTCSDC :::::: gi|109 LTCSDC 620 >>gi|109730191|gb|AAI12409.1| RIKEN cDNA 1300002K09 gene (621 aa) initn: 1887 init1: 1887 opt: 1887 Z-score: 2310.9 bits: 436.8 E(): 5.2e-120 Smith-Waterman score: 1887; 100.000% identity (100.000% similar) in 276 aa overlap (47-322:346-621) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::::::::::::::::::::::::::::: gi|109 ISVTKGVWVVTILPAALTCVTYLFHILACYRKHMKRLWAGDKHFLPQKFHSPSSAASVVA 320 330 340 350 360 370 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV 380 390 400 410 420 430 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL 440 450 460 470 480 490 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK 500 510 520 530 540 550 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL 560 570 580 590 600 610 320 mKIAA1 LTCSDC :::::: gi|109 LTCSDC 620 >>gi|12836354|dbj|BAB23619.1| unnamed protein product [M (621 aa) initn: 1887 init1: 1887 opt: 1887 Z-score: 2310.9 bits: 436.8 E(): 5.2e-120 Smith-Waterman score: 1887; 100.000% identity (100.000% similar) in 276 aa overlap (47-322:346-621) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::::::::::::::::::::::::::::: gi|128 ISVTKGVWVVTILPAALTCVTYLFHILACYRKHMKRLWAGDKHFLPQKFHSPSSAASVVA 320 330 340 350 360 370 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV 380 390 400 410 420 430 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL 440 450 460 470 480 490 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK 500 510 520 530 540 550 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL 560 570 580 590 600 610 320 mKIAA1 LTCSDC :::::: gi|128 LTCSDC 620 >>gi|67678213|gb|AAH97368.1| Hypothetical LOC298077 [Rat (621 aa) initn: 1758 init1: 1758 opt: 1758 Z-score: 2152.9 bits: 407.5 E(): 3.3e-111 Smith-Waterman score: 1758; 93.841% identity (97.464% similar) in 276 aa overlap (47-322:346-621) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA ::::::::::::.::::: ::::::::::: gi|676 ISVSKGVWVVTILPAALTCVTYLFHILACYRKHMKRLWAGDKYFLPQKSHSPSSAASVVA 320 330 340 350 360 370 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::::::::::::::::::::::.:::::.:.:::::::::. gi|676 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHQGLEMLRGLGLGVLTLSIA 380 390 400 410 420 430 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL ::::::::::::::::::::: .:::::::::::.::::::::::::::::::::::::: gi|676 VGLIILQVWIAGTFFLQPKLGPADKQKPLALNNRKAFHNFNYFLFFYNVLLGLGACLSRL 440 450 460 470 480 490 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|676 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK 500 510 520 530 540 550 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL : :::::.:. : ::::::::::::::::::::::::::::.:::::::::: :::::: gi|676 DGKLQKTAKHGCPNQSAGPRFSARARTRWFLLQTLINNPRLAMLRKSKSGHSFREFTQIL 560 570 580 590 600 610 320 mKIAA1 LTCSDC :::::: gi|676 LTCSDC 620 >>gi|148744079|gb|AAI42271.1| MGC157266 protein [Bos tau (618 aa) initn: 1630 init1: 1604 opt: 1604 Z-score: 1964.2 bits: 372.6 E(): 1.1e-100 Smith-Waterman score: 1604; 82.182% identity (96.364% similar) in 275 aa overlap (47-321:343-617) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::.:::::::::::: :::.:::. :::: gi|148 INITKEVWVVTILPASLTCVSYLFHILACYRKHIKRLWAGDKHFLPLKFHNPSSSESVVA 320 330 340 350 360 370 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::.:::::. .::.::::.:::..::::.:.:.:.::.::: gi|148 IARYSGWQIAYILWGYLIIHVMQSLCGLAIMYSLVLPVIHHQALEMLRGLGIGILTVSIV 380 390 400 410 420 430 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL .::..:::::: .::::::.::.:::::::::::::::::::::::.::::::::::::: gi|148 LGLMVLQVWIATSFFLQPKMGTDDKQKPLALNNRRAFHNFNYFLFFHNVLLGLGACLSRL 440 450 460 470 480 490 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK .:::.:::::::::::::.::::: :::::.::::::.:::::::::::::::::::::. gi|148 FISCVLGTWLIARIDRTILQSGYERADMGFSAWIGMLYVDHYHTNPVLVSFCHILITSHR 500 510 520 530 540 550 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL .:.::.:.::: ::::::::.:::.::::.:::::::::.:: ::::. : .: :::::: gi|148 ERRLQQTIKYWYLNQSAGPRLSARSRTRWLLLQTLINNPELVRLRKSRPGLGSQEFTQIL 560 570 580 590 600 610 320 mKIAA1 LTCSDC ::::. gi|148 LTCSES >>gi|126334124|ref|XP_001372459.1| PREDICTED: hypothetic (641 aa) initn: 1410 init1: 1410 opt: 1410 Z-score: 1726.4 bits: 328.7 E(): 1.9e-87 Smith-Waterman score: 1410; 76.834% identity (93.050% similar) in 259 aa overlap (47-305:367-625) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::.::::.:.: :.: :::.:::. :::: gi|126 INVAKGVWTLTIFSASLTCISYLFHILACYRKHIKRLWTGEKSFIPVKFHNPSSSNSVVA 340 350 360 370 380 390 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV ::::::::::::::::::::::: : :::.:::::::.::..:::::.:.:.:.::.::: gi|126 IARYSGWQIAYILWGYLIIHVVQCLFGVMIMYGLVLPVIHNQGLEMLKGLGIGMLTISIV 400 410 420 430 440 450 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL :::.:::. ::. ::::::.. .:::::::::::.:::::::::::::::::::::: :: gi|126 VGLMILQLKIAARFFLQPKINPGDKQKPLALNNRKAFHNFNYFLFFYNVLLGLGACLFRL 460 470 480 490 500 510 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK ..::.:::::::::::::::.::::::::: ::::::::::::::::::.:::::. . . gi|126 FVSCILGTWLIARIDRTIMQNGYEGADMGFQAWIGMLFVDHYHTNPVLVGFCHILLLGSN 520 530 540 550 560 570 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL .:::::.. :: ::.:.: :.: ..::::::: ::..::::..::: :: gi|126 ERKLQKSLPYWHLNHSTGSRISIKSRTRWFLLYTLLKNPRLILLRKPKSASGIRVATQTN 580 590 600 610 620 630 320 mKIAA1 LTCSDC gi|126 SVDIL 640 >>gi|149415625|ref|XP_001520426.1| PREDICTED: hypothetic (385 aa) initn: 1378 init1: 1378 opt: 1378 Z-score: 1689.9 bits: 321.2 E(): 2e-85 Smith-Waterman score: 1378; 72.491% identity (88.476% similar) in 269 aa overlap (47-315:114-382) 20 30 40 50 60 70 mKIAA1 QPGVATRDFIELGPYRKHHSYECQRFSLFPRKHMKRLWAGDKHFLPQKFHSPSSAASVVA :::.:::: :.:.::: :::::::. :..: gi|149 IKVTKGVWTWTSFPASLTCISYVFHILACYRKHIKRLWLGEKKFLPLKFHSPSSSESMAA 90 100 110 120 130 140 80 90 100 110 120 130 mKIAA1 IARYSGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHRGLEMLQGFGLGVLTLSIV :::::::::::::::::::::: : :::. :.::::. :..:: ::. .:.:.::.::. gi|149 IARYSGWQIAYILWGYLIIHVVLCLFGVMFTYSLVLPVGHNQGLAMLKDLGIGILTISII 150 160 170 180 190 200 140 150 160 170 180 190 mKIAA1 VGLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRL :::..::.:::: ::::::.: ::::::::::::.::::::::::::::::::::::::: gi|149 VGLMVLQIWIAGRFFLQPKIGPSDKQKPLALNNRKAFHNFNYFLFFYNVLLGLGACLSRL 210 220 230 240 250 260 200 210 220 230 240 250 mKIAA1 LISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHK :.::.::::::::.::::.:.::: ::::. .:::::::::::::::::::::::.:.: gi|149 LFSCILGTWLIARLDRTILQNGYERADMGYISWIGMLFVDHYHTNPVLVSFCHILVTDHA 270 280 290 300 310 320 260 270 280 290 300 310 mKIAA1 DRKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQIL .::.:...:: ::.: ::: : .:: ::::: ::..:::: ::: :. .. :: gi|149 ERKFQSSIKYGYLNHSPGPRVSQKARMRWFLLYTLLQNPRLSSLRKPKAELEFRDLPQIT 330 340 350 360 370 380 320 mKIAA1 LTCSDC gi|149 SS >>gi|221043772|dbj|BAH13563.1| unnamed protein product [ (220 aa) initn: 1149 init1: 1123 opt: 1160 Z-score: 1425.8 bits: 271.5 E(): 1e-70 Smith-Waterman score: 1160; 79.439% identity (92.523% similar) in 214 aa overlap (111-321:7-219) 90 100 110 120 130 mKIAA1 SGWQIAYILWGYLIIHVVQSLCGVMLMYGLVLPIIHHR---GLEMLQGFGLGVLTLSIVV : : :: :::::::.:.:.::.:::: gi|221 MWHGNHVQPGATHRPNQGLEMLQGLGIGILTISIVV 10 20 30 140 150 160 170 180 190 mKIAA1 GLIILQVWIAGTFFLQPKLGTSDKQKPLALNNRRAFHNFNYFLFFYNVLLGLGACLSRLL ::.:::. ::..:::::::::.:::::::::::.:::::::::::::::::::::::::: gi|221 GLMILQMCIAASFFLQPKLGTADKQKPLALNNRKAFHNFNYFLFFYNVLLGLGACLSRLL 40 50 60 70 80 90 200 210 220 230 240 250 mKIAA1 ISCLLGTWLIARIDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHKD :::::: ::::::::::::::::::::::.::::::..:::: :::::::::::::.:.. gi|221 ISCLLGMWLIARIDRTIMQSGYEGADMGFSAWIGMLYTDHYHINPVLVSFCHILITNHRE 100 110 120 130 140 150 260 270 280 290 300 310 mKIAA1 RKLQKTVKYWCLNQSAGPRFSARARTRWFLLQTLINNPRLVMLRKSKSGHSSGEFTQILL .:::...:::::::::::. :::.:::::::::::.::::.: :: : :::: : .:::. gi|221 KKLQQSTKYWCLNQSAGPHVSARSRTRWFLLQTLIDNPRLTMHRKLKLGHSSQE-SQILM 160 170 180 190 200 210 320 mKIAA1 TCSDC .::. gi|221 ACSES 220 322 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 17:37:19 2009 done: Sat Mar 14 17:43:09 2009 Total Scan time: 806.970 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]