FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0480.ptfa, 1937 aa vs ./tmplib.26680 library 1767080 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 10.4743+/-0.00769; mu= -7.4803+/- 0.510 mean_var=328.5512+/-78.943, 0's: 0 Z-trim: 9 B-trim: 0 in 0/36 Lambda= 0.0708 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 42, opt: 30, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4046 ( 1319 res) mpm06238 (1319) 342 50 4.6e-06 mKIAA0291 ( 993 res) mfj01134 ( 993) 265 42 0.00086 >>mKIAA4046 ( 1319 res) mpm06238 (1319 aa) initn: 285 init1: 285 opt: 342 Z-score: 201.3 bits: 50.1 E(): 4.6e-06 Smith-Waterman score: 348; 22.779% identity (25.543% ungapped) in 619 aa overlap (1325-1930:214-778) 1300 1310 1320 1330 1340 1350 mKIAA0 ELMKSKERSDVGHEQGGTEPLPLAATEELLDFHIGDRVLIGSVQPGTLRFKGETDFAKGF ....:::::.:... :..:: :::::::: mKIAA4 ATPQISNLTKTASESISNLSEAGSVKKGERELKVGDRVLVGGTKAGVVRFLGETDFAKGE 190 200 210 220 230 240 1360 1370 1380 1390 1400 1410 mKIAA0 WAGVELDKPEGNNNGTYDGIVYFVCKDKHGIFAPPQKISHLLENFDDTDINEDEESYSDE : :::::.: :.:.:. : :: :. :.:.::: .:.... .: .: . . . . mKIAA4 WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKI--GFPSTTPAKAKAAAVRR 250 260 270 280 290 300 1420 1430 1440 1450 1460 1470 mKIAA0 QYQ--PYNQEQKDIKCLKDRENNIAEYFCEKSLPSMHNTDASVDKDRSLNIETDTSEVLE . : . ... . ...: : . :..: :... : .:.:. mKIAA4 VMAATPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALK 310 320 330 340 350 360 1480 1490 1500 1510 1520 mKIAA0 VHGHQQPSVDPLISYKE-NKVLVSDATESVPAAAGAATSDNTFSGESKQQQLAE---KEE ..: .. :.. .. ... :. :: : : .. ... ....:.. : : . mKIAA4 ---EKQQHIEQLLAERDLERAEVAKATSHV----GEIEQELALARDGHDQHVLELEAKMD 370 380 390 400 410 1530 1540 1550 1560 1570 1580 mKIAA0 NFYSQV--LEKPSTPLLDLLTREKNQLEAQLKSSISEEKKSKQQLETVSLLTDSLLQVFV .. ..: .. .. ::. : .:: ..: .:. . ::. .: .::.... : .. . mKIAA4 QLRTMVEAADREKVELLNQLEEEKRKVE-DLQFRVEEESITKGDLEVATVSEKSRIMELE 420 430 440 450 460 470 1590 1600 1610 1620 1630 1640 mKIAA0 KDTVSQLQQVKKARNEKIQLSNQEFLDQKKVPPQDLPQN-TEEQSPSVPSCFLRSELEDE :: . . :.: . : . :...: :: :. .. . : :. . :.. :. mKIAA4 KDLALRAQEVAELRRR---------LESSK-PPGDVDMSLSLLQEISALQEKLEAIHTDH 480 490 500 510 520 1650 1660 1670 1680 1690 1700 mKIAA0 KEEISSPDMCPRPESPVFGASGQEELAKRLAELEISREFLSALDDQDWFDEDFGLSSSHK . :..: . ::: .: . :.. :. . : :: :. .: :. mKIAA4 QGEMTS-------LKEHFGAR-EEAFQKEIKALHTATEKLSK--------ENESLRSKLD 530 540 550 560 1710 1720 1730 1740 1750 1760 mKIAA0 IQKNKAEETIVPLMAEPKRAPQKPCETLLAVPHTA-EEVE-SLVHNAAEELWKWKELGQD . :: . .. : .. :: .: . : ::.. :. .. . . .. :: . mKIAA4 -HANKENSDVIALW-------KSKLETAIASHQQAMEELKVSFSKGIGTDSAEFAELKTQ 570 580 590 600 610 1770 1780 1790 1800 1810 1820 mKIAA0 LHGLSLPTTFLGGASKGLDIGSTSRRVYKQAVFDLTKEIFEEIFAEDPNVNQPVWMKPCR .. : : ..:. . :.: . .. . . .:. : . . : : mKIAA4 IERLRLDYQH---EIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAV---KAR 620 630 640 650 660 670 1830 1840 1850 1860 1870 1880 mKIAA0 INSSYFRR-VKNPNNLDEIKHFITTEVLKLLSLKKEPNHKTDWQKMMKFGRKKRDRVDHI ..:. .. :. ..:..... .:. : :. :: ..: .. . .. ..: . mKIAA4 LDSAEDQHLVEMEDTLNKLQE---AEI-KANSITKELQEKELVLTGLQDSLNQVNQVKET 680 690 700 710 720 1890 1900 1910 1920 1930 mKIAA0 LVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDT-IDVLNQISEKQGRMLLV : .::. . .... .:. . .. .. : . . :. ..::.. :: mKIAA4 LEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAK 730 740 750 760 770 780 mKIAA4 FKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKA 790 800 810 820 830 840 >>mKIAA0291 ( 993 res) mfj01134 (993 aa) initn: 291 init1: 244 opt: 265 Z-score: 160.4 bits: 42.1 E(): 0.00086 Smith-Waterman score: 278; 25.091% identity (30.000% ungapped) in 550 aa overlap (1248-1767:157-646) 1220 1230 1240 1250 1260 1270 mKIAA0 GISADEISKDDSEGSSPSSLRKDSQSHRDRSQLTRSSRSRATGSGSDEEISECLGEKSLS :.::: . : ::::: . : : ..:: mKIAA0 LDDPVGKNDGAVGGVRYFECPALQGIFTRPSKLTR--QPTAEGSGSDTHSVESLTAQNLS 130 140 150 160 170 180 1280 1290 1300 1310 1320 1330 mKIAA0 VHSGVHSE----RLLELRSPTELMKSKERSDVGHEQGGTEPLPLAATEELLDFHIGDRVL .:::. . :.. :: ...:. .. :.:.:.. .. . :.:.::::: mKIAA0 LHSGTATPPLTGRVIPLRES--VLNSSVKT--GNESGSNLSDSGSVKRGDKDLHLGDRVL 190 200 210 220 230 240 1340 1350 1360 1370 1380 1390 mKIAA0 IGSVQPGTLRFKGETDFAKGFWAGVELDKPEGNNNGTYDGIVYFVCKDKHGIFAPPQKIS .:... :..:. :::::::: : :::::. . : .: . :: mKIAA0 VGGTKTGVVRYVGETDFAKGEWCGVELDETQ----------VRSLCTN-------PQGHP 250 260 270 280 1400 1410 1420 1430 1440 1450 mKIAA0 HLLENFDDTDINEDE-ESYSDEQYQPYNQEQKDIKCLKDRENNIAEYFCEKSLPSMHNTD . : .... .::. .... ...: : :. :. : .:: :. mKIAA0 NWLPIHQSSQGQEDQTHGHGCLRFDP--QPQQHIEQL------LAERDLER--------- 290 300 310 320 1460 1470 1480 1490 1500 1510 mKIAA0 ASVDKDRSLNIETDTSEVLEVHGHQQPSVDPLISYKENKVLVSDAT-ESVPAAAGAATSD : : : : :.. .: :.: .. . .. ..:: .. :.: mKIAA0 AEVAKATSHICEVEKEIALLKAQHEQYVAEAEEKLQRARLLVENVRKEKVD--------- 330 340 350 360 370 1520 1530 1540 1550 1560 mKIAA0 NTFSGESKQQQLAEKEENFYSQVLEKPSTPLLDLLTREKNQLE----AQLKSSISEEKKS .:.. .... .: :.. .: :. : :: : ..::: ..:..:. :: . mKIAA0 --LSNQLEEER--RKVEDLQFRV-EEESITKGDLET--QTQLEHARIGELEQSLLLEKAQ 380 390 400 410 420 430 1570 1580 1590 1600 1610 1620 mKIAA0 KQQLETVSLLTDSLLQVFVKDTVSQLQQVKKARNEKIQLSNQEFLDQKKVPPQDLPQNTE ..: : . : : :. : ::.. . : .:. :. : :. :: : :. .: mKIAA0 AERLLR-ELADNRLTTVAEKSRVLQLEEELSLRRGEIE-ELQHCLLQSGPPPADHPEAAE 440 450 460 470 480 1630 1640 1650 1660 1670 mKIAA0 -----EQSPSVPSCFLR--SELEDEKEEISSPDMCPRPESPVFGASGQEELAKRLAELE- :. :. . : . :.:. :.. . . . . . . .:.: :... mKIAA0 TLRLRERLLSASKEHQRDSTLLQDKYEHMLKTYQTEVDKLRAANEKYAQEVADLKAKVQQ 490 500 510 520 530 540 1680 1690 1700 1710 1720 1730 mKIAA0 ISREFLSALDDQDWFDEDFGLSSSHK--IQKNKAEETIVPLMAEPKRAPQKPCETLLAVP . : .. .:. : .. .:.:.:. .. :: . : . . . : . . mKIAA0 ATTENMGLMDN--WKSKLDSLASDHQKSLEDLKATLNSGPGAQQKEIGELKALVEGIKME 550 560 570 580 590 600 1740 1750 1760 1770 1780 mKIAA0 HTAE--------EVESLVHNAAEELWKWK--ELGQDLHGLSLPTTFLGGASKGLDIGSTS : : ..:. .:. .: . : :. ..: ::. mKIAA0 HQLELGNLQAKHDLETAMHGKEKEGLRQKLQEVQEELAGLQQHWREQLEEQASQHRLELQ 610 620 630 640 650 660 1790 1800 1810 1820 1830 1840 mKIAA0 RRVYKQAVFDLTKEIFEEIFAEDPNVNQPVWMKPCRINSSYFRRVKNPNNLDEIKHFITT mKIAA0 EAQDQCRDAQLRAQELEGLDVEYRGQAQAIEFLKEQISLAEKKMLDYEMLQRAEAQSRQE 670 680 690 700 710 720 1937 residues in 1 query sequences 1767080 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:21:48 2006 done: Mon Mar 27 10:21:50 2006 Scan time: 1.460 Display time: 0.210 Function used was FASTA [version 3.4t11 Apr 17, 2002]