FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1320.ptfa, 150 aa vs ./tmplib.26680 library 1768867 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.5464+/-0.00388; mu= 15.6758+/- 0.260 mean_var=64.3168+/-14.615, 0's: 0 Z-trim: 15 B-trim: 55 in 1/35 Lambda= 0.1599 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0312 ( 2934 res) mbf01960 (2934) 488 122 1.8e-28 mKIAA4011 ( 876 res) mpm01139 ( 876) 481 120 2.7e-28 mKIAA1301 ( 1455 res) mbg18866 (1455) 481 120 3.6e-28 mKIAA0322 ( 1177 res) mbg19003 (1177) 465 116 4.2e-27 mKIAA0093 ( 904 res) mbg10506 ( 904) 464 116 4.2e-27 mKIAA1625 ( 222 res) mbh04778 ( 222) 417 104 3.5e-24 mKIAA0317 ( 826 res) mbg01653 ( 826) 326 84 1.5e-17 mKIAA4216 ( 906 res) mfj70377 ( 906) 315 81 9.4e-17 mKIAA0010 ( 1086 res) mbg01752 (1086) 314 81 1.2e-16 mKIAA1131 ( 1571 res) mth00654 (1571) 264 70 4.5e-13 mKIAA0393 ( 1871 res) mbg13346 (1871) 254 68 2.4e-12 mKIAA1593 ( 1058 res) mpm02342 (1058) 247 66 5.4e-12 mKIAA0032 ( 938 res) mbg05393 ( 938) 222 60 2.8e-10 mKIAA0896 ( 1765 res) mbg01966 (1765) 186 52 1.3e-07 mKIAA0614 ( 1159 res) mbg10347 (1159) 168 48 1.8e-06 >>mKIAA0312 ( 2934 res) mbf01960 (2934 aa) initn: 485 init1: 398 opt: 488 Z-score: 603.6 bits: 122.0 E(): 1.8e-28 Smith-Waterman score: 488; 51.007% identity (51.351% ungapped) in 149 aa overlap (1-149:2715-2862) 10 20 30 mKIAA1 KNLQWILDNDISDLGLELTFSVETDVFGAM ..: ..:.::.: :: .::::.:.. ::. mKIAA0 ECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVC 2690 2700 2710 2720 2730 2740 40 50 60 70 80 90 mKIAA1 EEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDE : :::.:..::::..:: :::.:: ..::: ::. :. :::.::. .:: ::..: : mKIAA0 EVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTE 2750 2760 2770 2780 2790 2800 100 110 120 130 140 150 mKIAA1 YELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR :::::.::.: ::..: .:::: . :. .. :::::...... : .:. .:::::: mKIAA0 QELELLISGLPTIDIDDLKSNTEYHK-YQSNSIQIQWFWRALRSFDQADRAKFLQFVTGT 2810 2820 2830 2840 2850 2860 mKIAA0 SKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLA 2870 2880 2890 2900 2910 2920 >>mKIAA4011 ( 876 res) mpm01139 (876 aa) initn: 472 init1: 375 opt: 481 Z-score: 600.3 bits: 119.7 E(): 2.7e-28 Smith-Waterman score: 481; 45.946% identity (46.259% ungapped) in 148 aa overlap (2-149:660-806) 10 20 30 mKIAA1 KNLQWILDNDISDLGLELTFSVETDVFGAME .: :. .:.: . :::. :::. ...: .. mKIAA4 TGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECGLEMYFSVDKEILGEIK 630 640 650 660 670 680 40 50 60 70 80 90 mKIAA1 EVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEY :::.::.::::..:: ::...:.: :..:... : .::..::. ..: . .: :: mKIAA4 SHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAK 690 700 710 720 730 740 100 110 120 130 140 150 mKIAA1 ELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR :::.:: :: :::.::: ... : : : . :.:::. :..: .:.:. ::::::: mKIAA4 ELEVLLCGMQEIDLNDWQRHAIYRH-YTRTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTC 750 760 770 780 790 800 mKIAA4 RLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIE 810 820 830 840 850 860 >>mKIAA1301 ( 1455 res) mbg18866 (1455 aa) initn: 476 init1: 427 opt: 481 Z-score: 598.0 bits: 120.0 E(): 3.6e-28 Smith-Waterman score: 481; 46.980% identity (47.297% ungapped) in 149 aa overlap (1-149:1238-1385) 10 20 30 mKIAA1 KNLQWILDNDISDLGLELTFSVETDVFGAM ..:::. :::: :. :.:::.:. .::: . mKIAA1 DAFFTRPFYKALLRILCDLSDLEYLDEEFHQSLQWMKDNDIHDI-LDLTFTVNEEVFGQI 1210 1220 1230 1240 1250 1260 40 50 60 70 80 90 mKIAA1 EEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDE : :::::..: ::..:: ::.. ... :. :.. : .....::. . :...:: mKIAA1 TERELKPGGANIPVTEKNKKEYIERMVKWRIERGVVQQTESLVRGFYEVVDARLVSVFDA 1270 1280 1290 1300 1310 1320 100 110 120 130 140 150 mKIAA1 YELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR ::::...: :::.::: .:::: .::. . ::.::: .:: ...:.:. ::::::: mKIAA1 RELELVIAGTAEIDLNDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFVTGT 1330 1340 1350 1360 1370 1380 mKIAA1 SSIPYEGFASLRGSNGPRRFCVEKWGKITALPRAHTCFNRLDLPPYPSFSMLYEKLLTAV 1390 1400 1410 1420 1430 1440 >>mKIAA0322 ( 1177 res) mbg19003 (1177 aa) initn: 460 init1: 414 opt: 465 Z-score: 579.0 bits: 116.1 E(): 4.2e-27 Smith-Waterman score: 465; 46.309% identity (46.622% ungapped) in 149 aa overlap (1-149:960-1107) 10 20 30 mKIAA1 KNLQWILDNDISDLGLELTFSVETDVFGAM ..:::. ::.:.:. :.:::.:. .::: . mKIAA0 DAFFTRPFYKGLLKLPCDLSDLEYLDEEFHQSLQWMKDNNITDI-LDLTFTVNEEVFGQV 930 940 950 960 970 980 40 50 60 70 80 90 mKIAA1 EEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDE : :: ::.. ::..:: ::.. ... :. :.. : .:.:.::. . :...:: mKIAA0 TERELKSGGANTQVTEKNKKEYIERMVKWRVERGVVQQTEALLRGFYEVVDSRLVSVFDA 990 1000 1010 1020 1030 1040 100 110 120 130 140 150 mKIAA1 YELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR ::::...: :::.::: .:::: .::. ::.::: .:: ...:.:. ::::::: mKIAA0 RELELVIAGTAEIDLNDWRNNTEYRGGYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGT 1050 1060 1070 1080 1090 1100 mKIAA0 SSVPYEGFAALRGSNGLRRFCIEKWGKITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAV 1110 1120 1130 1140 1150 1160 >>mKIAA0093 ( 904 res) mbg10506 (904 aa) initn: 428 init1: 428 opt: 464 Z-score: 578.9 bits: 115.7 E(): 4.2e-27 Smith-Waterman score: 464; 46.622% identity (47.260% ungapped) in 148 aa overlap (2-149:688-833) 10 20 30 mKIAA1 KNLQWILDNDISDLGLELTFSVETDVFGAME .:.:::.:: ..: .: : .. ..:: . mKIAA0 GFFIRPFYKMMLQKLITLHDMESVDSEYYSSLRWILENDPTEL--DLRFIIDEELFGQTH 660 670 680 690 700 710 40 50 60 70 80 90 mKIAA1 EVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEY . :: ::. :.::..:: ::. :: . :.. :: :. :: .:: .:: .::..::: mKIAA0 QHELKTGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDEN 720 730 740 750 760 770 100 110 120 130 140 150 mKIAA1 ELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR :::::. :. ..::::: ..:.: .:: . ::.:::..: . .:.:. ::::::: mKIAA0 ELELLMCGLGDVDVNDWREHTKYKNGYSMNHQVIHWFWKAVWMMDSEKRIRLLQFVTGTS 780 790 800 810 820 830 mKIAA0 RVPMNGFAELYGSNGPQSFTVEQWGTPDKLPRAHTCFNRLDLPPYESFDELWDKLQMAIE 840 850 860 870 880 890 >>mKIAA1625 ( 222 res) mbh04778 (222 aa) initn: 412 init1: 278 opt: 417 Z-score: 526.5 bits: 104.0 E(): 3.5e-24 Smith-Waterman score: 417; 43.624% identity (44.218% ungapped) in 149 aa overlap (1-149:61-207) 10 20 30 mKIAA1 KNLQWILDNDISDLGLELTFSVETDVFGAM :.: :::.:::. . :. :: :: ..:: . mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPV-LDHTFCVEHNAFGRI 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 EEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDE . :::.: .. ::..:: :::.: .. :. :.:. :. :. .::. .:: :.. ::. mKIAA1 LQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQ 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 YELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR ::::...:. .::.::: .::. .. ...:::..:: . .:.:. ::::::: mKIAA1 KELELIIGGLDKIDLNDWKSNTRLKHCVA-DSNIVRWFWQAVETFDEERRARLLQFVTGS 150 160 170 180 190 200 mKIAA1 TRVPLQGFKALQGD 210 220 >>mKIAA0317 ( 826 res) mbg01653 (826 aa) initn: 303 init1: 204 opt: 326 Z-score: 407.2 bits: 83.9 E(): 1.5e-17 Smith-Waterman score: 326; 37.162% identity (38.462% ungapped) in 148 aa overlap (5-149:615-760) 10 20 30 mKIAA1 KNLQWILDNDISDLGLELTFSVET-DVFGAMEE- .::.::.:.. ::.:. : . : ... mKIAA0 RSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEM--ELVFAEEKYNKSGQLDKI 590 600 610 620 630 640 40 50 60 70 80 90 mKIAA1 VPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYE : : ::.. ::. :: :..:... :.. .. ... ::.:.. ..: .:. .::: : mKIAA0 VELMTGGAQTPVTNANKIFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENE 650 660 670 680 690 700 100 110 120 130 140 150 mKIAA1 LELLLSGMPEIDVNDWIKNTEYTSG-YEREDPVIQWFWEVVEDITQEERVLLLQFVTGR ::::. : .:.:.:. .. ..: .. .. :..::: :: ..:::: . ::::.:: mKIAA0 LELLMCGTGDINVSDFKAHAVVVGGSWHFREKVMRWFWAVVSSLTQEELARLLQFTTGSS 710 720 730 740 750 760 mKIAA0 QLPPGGFAALCPSFQIIAAPTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEG 770 780 790 800 810 820 >>mKIAA4216 ( 906 res) mfj70377 (906 aa) initn: 305 init1: 180 opt: 315 Z-score: 393.1 bits: 81.4 E(): 9.4e-17 Smith-Waterman score: 315; 38.971% identity (39.552% ungapped) in 136 aa overlap (16-149:707-842) 10 20 30 40 mKIAA1 KNLQWILDNDISDLGLELTFSV-ETDVFGAMEEVPLKPGGGSILV . .::.. .::.:: :: .: .: . mKIAA4 GTFRDLGDSHPVLYQSLKDLLEYEGSVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPI 680 690 700 710 720 730 50 60 70 80 90 100 mKIAA1 TQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPS-LIQLFDEYELELLLSGMPEI :..:. :.:.: .. ...... :..:: .:::: : : :: :.:::. : .. mKIAA4 TNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNL 740 750 760 770 780 790 110 120 130 140 150 mKIAA1 DVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR : . ..::: .:: ::. ::. :::.:...:.:.. :.:::.:: mKIAA4 DFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKM 800 810 820 830 840 850 mKIAA4 IIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGFGML 860 870 880 890 900 >>mKIAA0010 ( 1086 res) mbg01752 (1086 aa) initn: 281 init1: 165 opt: 314 Z-score: 391.1 bits: 81.3 E(): 1.2e-16 Smith-Waterman score: 314; 36.424% identity (37.671% ungapped) in 151 aa overlap (1-148:871-1019) 10 20 mKIAA1 KNLQWI--LDNDISDLGLELTFSVETDVFG .:: .. ..:. .:::. :.: .. .: mKIAA0 PFAGFFLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEEDVEELGLN--FTVVNNDLG 850 860 870 880 890 30 40 50 60 70 80 mKIAA1 AMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLF . : :: :: .: :: :. :..::.. :... :.:. :: ::. . ...: mKIAA0 EAQVVELKFGGKDIPVTGANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMF 900 910 920 930 940 950 90 100 110 120 130 140 mKIAA1 DEYELELLLSGMP-EIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFV :. :...:.:: ....: . :.:..:: . :::. ::.::: .:.::. ::.:: mKIAA0 DQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFWRVVEGFTDEEKRKLLKFV 960 970 980 990 1000 1010 150 mKIAA1 TGR :. mKIAA0 TSCSRPPLLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFYDEALLRSKLLYAIE 1020 1030 1040 1050 1060 1070 >>mKIAA1131 ( 1571 res) mth00654 (1571 aa) initn: 232 init1: 121 opt: 264 Z-score: 327.1 bits: 70.0 E(): 4.5e-13 Smith-Waterman score: 264; 34.752% identity (35.507% ungapped) in 141 aa overlap (11-149:1366-1505) 10 20 30 40 mKIAA1 KNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGG : ::::.. : . ..: . : :::.: mKIAA1 GNKSLSEDEKNTKLQELVLRNPSGSGPPLSIEDLGLNFQFCPSSRIYG-FTAVDLKPSGE 1340 1350 1360 1370 1380 1390 50 60 70 80 90 100 mKIAA1 SILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGM . ..:..: :::.:. .. : .:: :..:: .::. .: .. :.. :....: : mKIAA1 DEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGN 1400 1410 1420 1430 1440 1450 110 120 130 140 150 mKIAA1 --PEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGR : ..: :. :: :: :..: . : .:. ....:: .:::.:: mKIAA1 QSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGL 1460 1470 1480 1490 1500 1510 mKIAA1 ANLHPRLTVVRKVDATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATMEKGFHLN 1520 1530 1540 1550 1560 1570 150 residues in 1 query sequences 1768867 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:40:55 2006 done: Mon Mar 27 10:40:56 2006 Scan time: 0.330 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]