# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbx00001.fasta.nr -Q ../query/mKIAA0946.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0946, 465 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7905971 sequences Expectation_n fit: rho(ln(x))= 5.1719+/-0.000185; mu= 11.5422+/- 0.010 mean_var=74.3378+/-14.506, 0's: 26 Z-trim: 122 B-trim: 28 in 1/65 Lambda= 0.148754 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|114645966|ref|XP_509231.2| PREDICTED: huntingti ( 763) 2968 646.4 7.4e-183 gi|109097854|ref|XP_001082309.1| PREDICTED: huntin ( 771) 2968 646.4 7.5e-183 gi|46395762|sp|Q80TN5.2|ZDH17_MOUSE RecName: Full= ( 632) 2903 632.4 1e-178 gi|46395885|sp|Q8IUH5.2|ZDH17_HUMAN RecName: Full= ( 632) 2879 627.2 3.6e-177 gi|119891843|ref|XP_614891.3| PREDICTED: similar t ( 632) 2879 627.2 3.6e-177 gi|149067010|gb|EDM16743.1| rCG48691, isoform CRA_ ( 632) 2875 626.4 6.5e-177 gi|24298794|dbj|BAC22089.1| huntingtin interacting ( 633) 2863 623.8 3.9e-176 gi|119617740|gb|EAW97334.1| zinc finger, DHHC-type ( 633) 2858 622.7 8.2e-176 gi|126339381|ref|XP_001363809.1| PREDICTED: simila ( 632) 2840 618.8 1.2e-174 gi|111599401|gb|AAI17789.1| Zinc finger, DHHC doma ( 622) 2836 618.0 2.1e-174 gi|26338482|dbj|BAC32912.1| unnamed protein produc ( 622) 2829 616.5 6e-174 gi|37590143|gb|AAH58772.1| Zdhhc17 protein [Mus mu ( 413) 2826 615.7 6.9e-174 gi|31455481|dbj|BAC77366.1| putative NFkB activati ( 622) 2812 612.8 7.6e-173 gi|62184167|gb|AAX73395.1| membrane-associated DHH ( 622) 2808 612.0 1.4e-172 gi|74197324|dbj|BAC30090.2| unnamed protein produc ( 406) 2794 608.8 7.9e-172 gi|53135405|emb|CAG32422.1| hypothetical protein [ ( 622) 2729 595.0 1.7e-167 gi|73978129|ref|XP_539691.2| PREDICTED: similar to ( 637) 2675 583.4 5.5e-164 gi|194226601|ref|XP_001491957.2| PREDICTED: zinc f ( 626) 2669 582.1 1.3e-163 gi|119617737|gb|EAW97331.1| zinc finger, DHHC-type ( 428) 2620 571.5 1.4e-160 gi|148726357|emb|CAN88113.1| novel protein similar ( 620) 2593 565.8 1.1e-158 gi|47209007|emb|CAF93429.1| unnamed protein produc ( 662) 2138 468.2 2.8e-129 gi|224094109|ref|XP_002193655.1| PREDICTED: huntin ( 494) 1909 419.0 1.4e-114 gi|74197325|dbj|BAC30097.2| unnamed protein produc ( 255) 1733 381.0 1.9e-103 gi|74187974|dbj|BAE37117.1| unnamed protein produc ( 256) 1686 370.9 2.1e-100 gi|210085036|gb|EEA33525.1| hypothetical protein B ( 583) 1551 342.2 2.1e-91 gi|215494499|gb|EEC04140.1| zinc finger protein, p ( 589) 1312 290.9 5.8e-76 gi|149720081|ref|XP_001501856.1| PREDICTED: zinc f ( 620) 1310 290.5 8.2e-76 gi|75061486|sp|Q5NVB9.1|ZDH13_PONAB RecName: Full= ( 622) 1303 289.0 2.3e-75 gi|31455483|dbj|BAC77367.1| putative NFkB activati ( 622) 1302 288.8 2.7e-75 gi|114636522|ref|XP_508324.2| PREDICTED: hypotheti ( 622) 1301 288.6 3.1e-75 gi|7023147|dbj|BAA91856.1| unnamed protein product ( 481) 1299 288.0 3.4e-75 gi|73988915|ref|XP_854853.1| PREDICTED: similar to ( 673) 1300 288.4 3.8e-75 gi|46395884|sp|Q8IUH4.2|ZDH13_HUMAN RecName: Full= ( 622) 1299 288.1 4.2e-75 gi|24298796|dbj|BAC22090.1| huntingtin interacting ( 622) 1299 288.1 4.2e-75 gi|119918920|ref|XP_869882.2| PREDICTED: zinc fing ( 706) 1299 288.2 4.6e-75 gi|119588764|gb|EAW68358.1| zinc finger, DHHC-type ( 622) 1298 287.9 4.9e-75 gi|223648380|gb|ACN10948.1| Probable palmitoyltran ( 646) 1293 286.9 1.1e-74 gi|158256132|dbj|BAF84037.1| unnamed protein produ ( 622) 1288 285.8 2.2e-74 gi|126332500|ref|XP_001379963.1| PREDICTED: hypoth ( 640) 1286 285.4 3e-74 gi|75076294|sp|Q4R690.1|ZDH13_MACFA RecName: Full= ( 622) 1285 285.1 3.4e-74 gi|194386682|dbj|BAG61151.1| unnamed protein produ ( 216) 1274 282.4 7.7e-74 gi|27693740|gb|AAH30990.1| ZDHHC17 protein [Homo s ( 276) 1274 282.5 9.3e-74 gi|148691019|gb|EDL22966.1| zinc finger, DHHC doma ( 622) 1269 281.7 3.6e-73 gi|92081582|dbj|BAE93338.1| zinc finger protein [C ( 591) 1267 281.2 4.7e-73 gi|46395968|sp|Q9CWU2.2|ZDH13_MOUSE RecName: Full= ( 622) 1267 281.3 4.9e-73 gi|56269606|gb|AAH86723.1| Zinc finger, DHHC-type ( 645) 1267 281.3 5e-73 gi|189521047|ref|XP_001918491.1| PREDICTED: hypoth ( 645) 1265 280.8 6.8e-73 gi|74219119|dbj|BAE26700.1| unnamed protein produc ( 622) 1258 279.3 1.9e-72 gi|221119205|ref|XP_002162876.1| PREDICTED: simila ( 644) 1251 277.8 5.4e-72 gi|149055801|gb|EDM07232.1| rCG53699 [Rattus norve ( 622) 1248 277.2 8.3e-72 >>gi|114645966|ref|XP_509231.2| PREDICTED: huntingtin in (763 aa) initn: 3058 init1: 2968 opt: 2968 Z-score: 3439.2 bits: 646.4 E(): 7.4e-183 Smith-Waterman score: 2968; 95.595% identity (98.018% similar) in 454 aa overlap (8-461:103-556) 10 20 30 mKIAA0 GGGGGGAASPSSGLALALALALRLAEPREAETLSPSM ::: .::::: ::::.:::::.: gi|114 PRTRGETRALRGGRGQRGRHGGRRRRRRRPASPPAGLALAPRSPSASPEPREGETLSPGM 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA0 QREEGFNTKMADGPDEYETETGCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWDI :::::::::::::::::.::.::::::::::::::::::::::::::::::::::::::: gi|114 QREEGFNTKMADGPDEYDTEAGCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWDI 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA0 VKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG 200 210 220 230 240 250 160 170 180 190 200 210 mKIAA0 DLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ 260 270 280 290 300 310 220 230 240 250 260 270 mKIAA0 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVI 320 330 340 350 360 370 280 290 300 310 320 330 mKIAA0 SLLLEAGGNVDAQNVKGESALDLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKEF :::::::.::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKEF 380 390 400 410 420 430 340 350 360 370 380 390 mKIAA0 RQKVMLGTPFLVIWLVGFIADLDIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPLG ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|114 RQKVMLGTPFLVIWLVGFIADLNIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPLG 440 450 460 470 480 490 400 410 420 430 440 450 mKIAA0 IYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQKK 500 510 520 530 540 550 460 mKIAA0 KVVMYPAN :... gi|114 KTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRY 560 570 580 590 600 610 >>gi|109097854|ref|XP_001082309.1| PREDICTED: huntingtin (771 aa) initn: 3058 init1: 2968 opt: 2968 Z-score: 3439.1 bits: 646.4 E(): 7.5e-183 Smith-Waterman score: 2968; 95.595% identity (98.018% similar) in 454 aa overlap (8-461:111-564) 10 20 30 mKIAA0 GGGGGGAASPSSGLALALALALRLAEPREAETLSPSM ::: .::::: ::::.:::::.: gi|109 LSRTRGETRALRGGRGQRGRHGGRRKRRRPASPPAGLALAPRSPSASPEPREGETLSPGM 90 100 110 120 130 140 40 50 60 70 80 90 mKIAA0 QREEGFNTKMADGPDEYETETGCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWDI :::::::::::::::::.::.::::::::::::::::::::::::::::::::::::::: gi|109 QREEGFNTKMADGPDEYDTEAGCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWDI 150 160 170 180 190 200 100 110 120 130 140 150 mKIAA0 VKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG 210 220 230 240 250 260 160 170 180 190 200 210 mKIAA0 DLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ 270 280 290 300 310 320 220 230 240 250 260 270 mKIAA0 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVI 330 340 350 360 370 380 280 290 300 310 320 330 mKIAA0 SLLLEAGGNVDAQNVKGESALDLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKEF :::::::.::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|109 SLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKEF 390 400 410 420 430 440 340 350 360 370 380 390 mKIAA0 RQKVMLGTPFLVIWLVGFIADLDIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPLG ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|109 RQKVMLGTPFLVIWLVGFIADLNIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPLG 450 460 470 480 490 500 400 410 420 430 440 450 mKIAA0 IYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQKK 510 520 530 540 550 560 460 mKIAA0 KVVMYPAN :... gi|109 KTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRY 570 580 590 600 610 620 >>gi|46395762|sp|Q80TN5.2|ZDH17_MOUSE RecName: Full=Palm (632 aa) initn: 3038 init1: 2903 opt: 2903 Z-score: 3364.9 bits: 632.4 E(): 1e-178 Smith-Waterman score: 2903; 99.294% identity (100.000% similar) in 425 aa overlap (37-461:1-425) 10 20 30 40 50 60 mKIAA0 AASPSSGLALALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHP :::::::::::::::::::::::::::::: gi|463 MQREEGFNTKMADGPDEYETETGCVPLLHP 10 20 30 70 80 90 100 110 120 mKIAA0 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP 340 350 360 370 380 390 430 440 450 460 mKIAA0 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKVVMYPAN ::::::::::::::::::::::::::::::::... gi|463 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRS 400 410 420 430 440 450 gi|463 KHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCET 460 470 480 490 500 510 >>gi|46395885|sp|Q8IUH5.2|ZDH17_HUMAN RecName: Full=Palm (632 aa) initn: 2969 init1: 2879 opt: 2879 Z-score: 3337.1 bits: 627.2 E(): 3.6e-177 Smith-Waterman score: 2879; 98.118% identity (100.000% similar) in 425 aa overlap (37-461:1-425) 10 20 30 40 50 60 mKIAA0 AASPSSGLALALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHP ::::::::::::::::::.::.:::::::: gi|463 MQREEGFNTKMADGPDEYDTEAGCVPLLHP 10 20 30 70 80 90 100 110 120 mKIAA0 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN ::::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|463 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|463 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWLI 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP 340 350 360 370 380 390 430 440 450 460 mKIAA0 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKVVMYPAN ::::::::::::::::::::::::::::::::... gi|463 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRS 400 410 420 430 440 450 gi|463 KHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCET 460 470 480 490 500 510 >>gi|119891843|ref|XP_614891.3| PREDICTED: similar to hu (632 aa) initn: 2969 init1: 2879 opt: 2879 Z-score: 3337.1 bits: 627.2 E(): 3.6e-177 Smith-Waterman score: 2879; 97.882% identity (100.000% similar) in 425 aa overlap (37-461:1-425) 10 20 30 40 50 60 mKIAA0 AASPSSGLALALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHP :::::::::::::::::::.:.:::::::: gi|119 MQREEGFNTKMADGPDEYESEAGCVPLLHP 10 20 30 70 80 90 100 110 120 mKIAA0 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN ::::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|119 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|119 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWLI 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP 340 350 360 370 380 390 430 440 450 460 mKIAA0 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKVVMYPAN :::::.::::::::::::::::::::::::::... gi|119 FLANSIALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRS 400 410 420 430 440 450 gi|119 KHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCET 460 470 480 490 500 510 >>gi|149067010|gb|EDM16743.1| rCG48691, isoform CRA_b [R (632 aa) initn: 3010 init1: 2875 opt: 2875 Z-score: 3332.4 bits: 626.4 E(): 6.5e-177 Smith-Waterman score: 2875; 98.118% identity (99.765% similar) in 425 aa overlap (37-461:1-425) 10 20 30 40 50 60 mKIAA0 AASPSSGLALALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHP ::::::::::::::::::.::::::::::: gi|149 MQREEGFNTKMADGPDEYDTETGCVPLLHP 10 20 30 70 80 90 100 110 120 mKIAA0 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|149 EEIKPQSHYNHGYGEPLGRKTHVDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|149 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWLI 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP ::::::::::::::::::::::::::::::::::::::::::::::::::::.:: :::: gi|149 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLSFLSIHLP 340 350 360 370 380 390 430 440 450 460 mKIAA0 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKVVMYPAN ::::::::::::::::::::::::::::::::... gi|149 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRS 400 410 420 430 440 450 gi|149 KHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCET 460 470 480 490 500 510 >>gi|24298794|dbj|BAC22089.1| huntingtin interacting pro (633 aa) initn: 2866 init1: 1690 opt: 2863 Z-score: 3318.5 bits: 623.8 E(): 3.9e-176 Smith-Waterman score: 2863; 97.653% identity (99.765% similar) in 426 aa overlap (37-461:1-426) 10 20 30 40 50 60 mKIAA0 AASPSSGLALALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHP ::::::::::::::::::.::.:::::::: gi|242 MQREEGFNTKMADGPDEYDTEAGCVPLLHP 10 20 30 70 80 90 100 110 120 mKIAA0 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|242 EEIKPQSHFNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|242 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SLIDGEGCSCIHLAAQFGHTSIV-AYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRL ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|242 SLIDGEGCSCIHLAAQFGHTSIVVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRK :::::::::::::::::::::::::::::::::::::::.::::::.::::::::::::: gi|242 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 NVWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWL ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|242 NVWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 IKGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|242 IKGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHL 340 350 360 370 380 390 430 440 450 460 mKIAA0 PFLANSVALFYNFGKSWKSDPGIIKATEEQKKKVVMYPAN :::::::::::::::::::::::::::::::::... gi|242 PFLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVR 400 410 420 430 440 450 gi|242 SKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCE 460 470 480 490 500 510 >>gi|119617740|gb|EAW97334.1| zinc finger, DHHC-type con (633 aa) initn: 2857 init1: 2593 opt: 2858 Z-score: 3312.7 bits: 622.7 E(): 8.2e-176 Smith-Waterman score: 2858; 97.653% identity (99.531% similar) in 426 aa overlap (37-461:1-426) 10 20 30 40 50 60 mKIAA0 AASPSSGLALALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHP ::::::::::::::::::.::.:::::::: gi|119 MQREEGFNTKMADGPDEYDTEAGCVPLLHP 10 20 30 70 80 90 100 110 120 mKIAA0 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN ::::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|119 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|119 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWLI 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWN-DLNFLFIHL :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|119 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNAHLNFLFIHL 340 350 360 370 380 390 430 440 450 460 mKIAA0 PFLANSVALFYNFGKSWKSDPGIIKATEEQKKKVVMYPAN :::::::::::::::::::::::::::::::::... gi|119 PFLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVR 400 410 420 430 440 450 gi|119 SKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCE 460 470 480 490 500 510 >>gi|126339381|ref|XP_001363809.1| PREDICTED: similar to (632 aa) initn: 2931 init1: 2840 opt: 2840 Z-score: 3291.9 bits: 618.8 E(): 1.2e-174 Smith-Waterman score: 2840; 96.471% identity (99.059% similar) in 425 aa overlap (37-461:1-425) 10 20 30 40 50 60 mKIAA0 AASPSSGLALALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHP ::: :::::::::.::::: :.::::.::: gi|126 MQRGEGFNTKMADSPDEYEKEAGCVPILHP 10 20 30 70 80 90 100 110 120 mKIAA0 EEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|126 EEIKPQSHYNHGYGEPLGRKSHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKN :::::::::::::::::::::::::::::::::::.::.::::::.:::: ::::::::: gi|126 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLDAGANVDAQNIKGESPLDLAKQRKN 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|126 VWMINHLQEARQAKGYDNPSFLKKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLI 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KGLMYGGVWAMVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLP 340 350 360 370 380 390 430 440 450 460 mKIAA0 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKVVMYPAN ::::::::::::::::::::::::::::::::... gi|126 FLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRS 400 410 420 430 440 450 gi|126 KHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGIHCET 460 470 480 490 500 510 >>gi|111599401|gb|AAI17789.1| Zinc finger, DHHC domain c (622 aa) initn: 2971 init1: 2836 opt: 2836 Z-score: 3287.3 bits: 618.0 E(): 2.1e-174 Smith-Waterman score: 2836; 99.277% identity (100.000% similar) in 415 aa overlap (47-461:1-415) 20 30 40 50 60 70 mKIAA0 ALALALRLAEPREAETLSPSMQREEGFNTKMADGPDEYETETGCVPLLHPEEIKPQSHYN :::::::::::::::::::::::::::::: gi|111 MADGPDEYETETGCVPLLHPEEIKPQSHYN 10 20 30 80 90 100 110 120 130 mKIAA0 HGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 HGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAIN 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 NRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 NRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSC 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 IHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 IHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLG 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA0 DKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKNVWMINHLQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 DKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKNVWMINHLQEA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA0 RQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLIKGLMYGGVWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 RQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDIDSWLIKGLMYGGVWA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA0 TVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 TVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFY 340 350 360 370 380 390 440 450 460 mKIAA0 NFGKSWKSDPGIIKATEEQKKKVVMYPAN ::::::::::::::::::::::... gi|111 NFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCI 400 410 420 430 440 450 465 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 05:47:54 2009 done: Tue Mar 17 05:54:39 2009 Total Scan time: 915.290 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]