# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbr07151.fasta.nr -Q ../query/mKIAA1393.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1393, 410 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920681 sequences Expectation_n fit: rho(ln(x))= 5.2299+/-0.00018; mu= 10.1013+/- 0.010 mean_var=68.7490+/-13.497, 0's: 31 Z-trim: 35 B-trim: 0 in 0/67 Lambda= 0.154683 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148704564|gb|EDL36511.1| TRM5 tRNA methyltransf ( 449) 2609 591.2 1.6e-166 gi|81904625|sp|Q9D0C4.1|TRMT5_MOUSE RecName: Full= ( 501) 2609 591.2 1.8e-166 gi|148704565|gb|EDL36512.1| TRM5 tRNA methyltransf ( 509) 2609 591.2 1.8e-166 gi|149051437|gb|EDM03610.1| TRM5 tRNA methyltransf ( 449) 2491 564.8 1.4e-158 gi|149051438|gb|EDM03611.1| TRM5 tRNA methyltransf ( 500) 2491 564.9 1.5e-158 gi|194225071|ref|XP_001492987.2| PREDICTED: simila ( 559) 2279 517.6 2.8e-144 gi|194034229|ref|XP_001924855.1| PREDICTED: simila ( 440) 2276 516.8 3.7e-144 gi|55640897|ref|XP_522871.1| PREDICTED: tRNA-(N1G3 ( 537) 2261 513.6 4.4e-143 gi|80478626|gb|AAI08285.1| TRM5 tRNA methyltransfe ( 509) 2255 512.2 1.1e-142 gi|145559536|sp|Q32P41.2|TRMT5_HUMAN RecName: Full ( 509) 2244 509.7 5.9e-142 gi|57090201|ref|XP_537470.1| PREDICTED: similar to ( 541) 2244 509.8 6.2e-142 gi|119371016|sp|Q3MHN8.1|TRMT5_BOVIN RecName: Full ( 497) 2242 509.3 7.9e-142 gi|109083855|ref|XP_001097647.1| PREDICTED: simila ( 509) 2238 508.4 1.5e-141 gi|109083857|ref|XP_001097447.1| PREDICTED: simila ( 536) 2238 508.4 1.6e-141 gi|109083853|ref|XP_001097545.1| PREDICTED: simila ( 537) 2238 508.4 1.6e-141 gi|75048562|sp|Q95KJ2.1|TRMT5_MACFA RecName: Full= ( 509) 2229 506.4 6e-141 gi|118092135|ref|XP_421419.2| PREDICTED: similar t ( 442) 1944 442.8 7.5e-122 gi|224051859|ref|XP_002200401.1| PREDICTED: TRM5 t ( 554) 1834 418.3 2.2e-114 gi|189527007|ref|XP_001922937.1| PREDICTED: simila ( 430) 1621 370.7 3.6e-100 gi|126631509|gb|AAI33896.1| LOC564078 protein [Dan ( 475) 1621 370.7 4e-100 gi|220678649|emb|CAX14731.1| novel protein similar ( 480) 1621 370.7 4e-100 gi|152012722|gb|AAI50348.1| LOC564078 protein [Dan ( 481) 1612 368.7 1.6e-99 gi|47230129|emb|CAG10543.1| unnamed protein produc ( 404) 1591 364.0 3.6e-98 gi|210090145|gb|EEA38430.1| hypothetical protein B ( 411) 1349 310.0 6.6e-82 gi|210117955|gb|EEA65689.1| hypothetical protein B ( 411) 1345 309.1 1.2e-81 gi|67678454|gb|AAH97924.1| MGC132022 protein [Xeno ( 294) 1341 308.1 1.7e-81 gi|194034233|ref|XP_001924297.1| PREDICTED: simila ( 235) 1263 290.6 2.5e-76 gi|115715496|ref|XP_001179975.1| PREDICTED: simila ( 453) 1217 280.5 5.2e-73 gi|115715498|ref|XP_784079.2| PREDICTED: similar t ( 456) 1217 280.5 5.3e-73 gi|193919781|gb|EDW18648.1| GI13347 [Drosophila mo ( 435) 1156 266.9 6.4e-69 gi|76780162|gb|AAI06606.1| MGC132022 protein [Xeno ( 315) 1151 265.7 1.1e-68 gi|156215816|gb|EDO36767.1| predicted protein [Nem ( 398) 1151 265.8 1.3e-68 gi|194164377|gb|EDW79278.1| GK19130 [Drosophila wi ( 449) 1140 263.3 7.8e-68 gi|194179607|gb|EDW93218.1| GE21330 [Drosophila ya ( 457) 1130 261.1 3.7e-67 gi|194154128|gb|EDW69312.1| GJ13175 [Drosophila vi ( 438) 1129 260.9 4.2e-67 gi|45445776|gb|AAN11538.2| CG32281 [Drosophila mel ( 457) 1126 260.2 6.9e-67 gi|194118401|gb|EDW40444.1| GL24890 [Drosophila pe ( 440) 1122 259.3 1.2e-66 gi|198149995|gb|EDY73530.1| GA23546 [Drosophila ps ( 440) 1121 259.1 1.4e-66 gi|193897474|gb|EDV96340.1| GH16197 [Drosophila gr ( 436) 1118 258.4 2.3e-66 gi|194195450|gb|EDX09026.1| GD13733 [Drosophila si ( 457) 1117 258.2 2.8e-66 gi|194128241|gb|EDW50284.1| GM14540 [Drosophila se ( 457) 1117 258.2 2.8e-66 gi|190653485|gb|EDV50728.1| GG15106 [Drosophila er ( 457) 1115 257.8 3.8e-66 gi|190624305|gb|EDV39829.1| GF20072 [Drosophila an ( 435) 1107 256.0 1.2e-65 gi|198432399|ref|XP_002124503.1| PREDICTED: simila ( 456) 1097 253.8 6.1e-65 gi|157016010|gb|EAA10891.4| AGAP006124-PA [Anophel ( 556) 1065 246.7 1e-62 gi|158273064|gb|EDO98857.1| tRNA-(N1G37) methyltra ( 400) 1050 243.2 7.9e-62 gi|108874288|gb|EAT38513.1| conserved hypothetical ( 562) 1038 240.6 6.6e-61 gi|217927670|gb|ACK57236.1| CG32281-like protein [ ( 359) 1021 236.7 6.4e-60 gi|212511352|gb|EEB14356.1| conserved hypothetical ( 463) 1008 233.9 5.9e-59 gi|156537822|ref|XP_001608078.1| PREDICTED: simila ( 396) 995 231.0 3.9e-58 >>gi|148704564|gb|EDL36511.1| TRM5 tRNA methyltransferas (449 aa) initn: 2657 init1: 2609 opt: 2609 Z-score: 3145.9 bits: 591.2 E(): 1.6e-166 Smith-Waterman score: 2609; 99.497% identity (100.000% similar) in 398 aa overlap (1-398:26-423) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALRRVALQ ::::::::::::::::::::::::::::::::::: gi|148 MPEIEASVRDSELFSPPSDVRGMRELDRTAFKKTVSIPVLKARKEVVNRLMRALRRVALQ 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 RPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLELTYEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLELTYEN 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 FKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGITSAVNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGITSAVNK 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 TSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITELLNPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITELLNPG 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 DVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNMDGKDF :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|148 DVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCKLNKVDQKVKVFNMDGKDF 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 IQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLPTVHCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLPTVHCY 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 CFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLYRNQSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLYRNQSL 370 380 390 400 410 420 400 410 mKIAA1 SLREFFTMKCGVYYP ::. gi|148 SLQNDQEPPLKRQKTGDPFSGEPQIASDS 430 440 >>gi|81904625|sp|Q9D0C4.1|TRMT5_MOUSE RecName: Full=tRNA (501 aa) initn: 2657 init1: 2609 opt: 2609 Z-score: 3145.2 bits: 591.2 E(): 1.8e-166 Smith-Waterman score: 2609; 99.497% identity (100.000% similar) in 398 aa overlap (1-398:78-475) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALR :::::::::::::::::::::::::::::: gi|819 QGLSTMPEIEASVRDSELFSPPSDVRGMRELDRTAFKKTVSIPVLKARKEVVNRLMRALR 50 60 70 80 90 100 40 50 60 70 80 90 mKIAA1 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE 110 120 130 140 150 160 100 110 120 130 140 150 mKIAA1 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT 170 180 190 200 210 220 160 170 180 190 200 210 mKIAA1 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE 230 240 250 260 270 280 220 230 240 250 260 270 mKIAA1 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNM ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|819 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCKLNKVDQKVKVFNM 290 300 310 320 330 340 280 290 300 310 320 330 mKIAA1 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP 350 360 370 380 390 400 340 350 360 370 380 390 mKIAA1 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY 410 420 430 440 450 460 400 410 mKIAA1 RNQSLSLREFFTMKCGVYYP :::::::. gi|819 RNQSLSLQNDQEPPLKRQKTGDPFSGEPQIASDS 470 480 490 500 >>gi|148704565|gb|EDL36512.1| TRM5 tRNA methyltransferas (509 aa) initn: 2657 init1: 2609 opt: 2609 Z-score: 3145.1 bits: 591.2 E(): 1.8e-166 Smith-Waterman score: 2609; 99.497% identity (100.000% similar) in 398 aa overlap (1-398:86-483) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALR :::::::::::::::::::::::::::::: gi|148 QGLSTMPEIEASVRDSELFSPPSDVRGMRELDRTAFKKTVSIPVLKARKEVVNRLMRALR 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA1 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA1 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA1 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNM ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|148 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCKLNKVDQKVKVFNM 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA1 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA1 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY 420 430 440 450 460 470 400 410 mKIAA1 RNQSLSLREFFTMKCGVYYP :::::::. gi|148 RNQSLSLQNDQEPPLKRQKTGDPFSGEPQIASDS 480 490 500 >>gi|149051437|gb|EDM03610.1| TRM5 tRNA methyltransferas (449 aa) initn: 2531 init1: 2491 opt: 2491 Z-score: 3003.6 bits: 564.8 E(): 1.4e-158 Smith-Waterman score: 2491; 93.719% identity (98.744% similar) in 398 aa overlap (1-398:26-423) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALRRVALQ :::::::::: :::::::::::.:::::::::::: gi|149 MPEAEASVRDRELFSPPSDVRGMTKLDRTAFKKTVPIPVLKARKEVVSRLMRALRRVALQ 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 RPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLELTYEN ::::::::::::::::::::::::::::.:::.: ::..::::::.:::::::::::::: gi|149 RPGIKRVIEDPKDEDSRLIMLDPYRMLTSDSFEKPELSALKELDVNPQLSQYNLELTYEN 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 FKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGITSAVNK :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FKSEEILRAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGITSAVNK 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 TSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITELLNPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITELLNPG 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 DVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNMDGKDF ::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::::: gi|149 DVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHRWLLHNCKLNKVDQKVKVFNMDGKDF 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 IQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLPTVHCY .:::::::::::::::.:.:::.::::::::::::::::::::::::::::: :: :::: gi|149 LQGPVREELMLRLGLSTEGKPSLHIVMNLPAKAIEFLSVFRSLLDGQPCSTERLPIVHCY 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 CFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLYRNQSL :::::::::::.::.::::::: ::.::::::::::::::::::::::::::::::.:.: gi|149 CFSKDSDPAKDARQRAEAVLGVCLEASSSVHLVRNVAPNKEMLCITFQIPTATLYRDQAL 370 380 390 400 410 420 400 410 mKIAA1 SLREFFTMKCGVYYP .:. gi|149 GLQNDQEPPLKRQKTGEPFSGEPQSASDS 430 440 >>gi|149051438|gb|EDM03611.1| TRM5 tRNA methyltransferas (500 aa) initn: 2531 init1: 2491 opt: 2491 Z-score: 3002.9 bits: 564.9 E(): 1.5e-158 Smith-Waterman score: 2491; 93.719% identity (98.744% similar) in 398 aa overlap (1-398:77-474) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALR :::::::::: :::::::::::.::::::: gi|149 QGFSTMPEAEASVRDRELFSPPSDVRGMTKLDRTAFKKTVPIPVLKARKEVVSRLMRALR 50 60 70 80 90 100 40 50 60 70 80 90 mKIAA1 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE :::::::::::::::::::::::::::::::::.:::.: ::..::::::.::::::::: gi|149 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTSDSFEKPELSALKELDVNPQLSQYNLE 110 120 130 140 150 160 100 110 120 130 140 150 mKIAA1 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LTYENFKSEEILRAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT 170 180 190 200 210 220 160 170 180 190 200 210 mKIAA1 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE 230 240 250 260 270 280 220 230 240 250 260 270 mKIAA1 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNM :::::::::::::::::::::::::::::::::::::::.::::::.::::::::::::: gi|149 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHRWLLHNCKLNKVDQKVKVFNM 290 300 310 320 330 340 280 290 300 310 320 330 mKIAA1 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP :::::.:::::::::::::::.:.:::.::::::::::::::::::::::::::::: :: gi|149 DGKDFLQGPVREELMLRLGLSTEGKPSLHIVMNLPAKAIEFLSVFRSLLDGQPCSTERLP 350 360 370 380 390 400 340 350 360 370 380 390 mKIAA1 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY :::::::::::::::.::.::::::: ::.::::::::::::::::::::::::::::: gi|149 IVHCYCFSKDSDPAKDARQRAEAVLGVCLEASSSVHLVRNVAPNKEMLCITFQIPTATLY 410 420 430 440 450 460 400 410 mKIAA1 RNQSLSLREFFTMKCGVYYP :.:.:.:. gi|149 RDQALGLQNDQEPPLKRQKTGEPFSGEPQSASDS 470 480 490 500 >>gi|194225071|ref|XP_001492987.2| PREDICTED: similar to (559 aa) initn: 2321 init1: 1737 opt: 2279 Z-score: 2746.5 bits: 517.6 E(): 2.8e-144 Smith-Waterman score: 2279; 84.810% identity (96.456% similar) in 395 aa overlap (1-394:134-528) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALR ::::::::::.:::::.:::.:..:::.:. gi|194 KRFSTMPETETNQRDSELFAPPSDVRGMTKLDRTAFKKTVTIPVLKVRKEIVSKLMRSLK 110 120 130 140 150 160 40 50 60 70 80 90 mKIAA1 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE :.::::::::::::::.::.:::::::::.:.: :::.:::: .:..:.:.::.:.:::: gi|194 RAALQRPGIKRVIEDPEDEESRLIMLDPYKMFTNDSFEKAELDILRQLNVNPQISKYNLE 170 180 190 200 210 220 100 110 120 130 140 150 mKIAA1 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT ::::::::::::.:::::::::::::::::::::::::::::::::::::::.::::::: gi|194 LTYENFKSEEILRAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMIDKNPGIT 230 240 250 260 270 280 160 170 180 190 200 210 mKIAA1 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE ::::: .:::::::::::::: :::::.:::::::::::::::::::::::::::.:::: gi|194 SAVNKINNIDNTYRNFQMEVLSGEENMMTKVRENNYTYEFDFSKVYWNPRLSTEHSRITE 290 300 310 320 330 340 220 230 240 250 260 270 mKIAA1 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNM ::.::::::::::::::::::.:.::::::::::::::::::::::.::::::::::::. gi|194 LLKPGDVLFDVFAGVGPFAIPVAKKNCTVFANDLNPESHKWLLHNCKLNKVDQKVKVFNL 350 360 370 380 390 400 280 290 300 310 320 mKIAA1 DGKDFIQGPVREELMLRLG-LSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELL :::::.::::::::: .:: :: : : :::::::::::::::::.:. :::::::..::: gi|194 DGKDFLQGPVREELMQQLGPLSKERKHSVHIVMNLPAKAIEFLSAFKLLLDGQPCGSELL 410 420 430 440 450 460 330 340 350 360 370 380 mKIAA1 PTVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATL : :::: ::::..:::::.:.: ::::.:::. :::::::::::::::::::::::.:.: gi|194 PIVHCYSFSKDANPAKDVQQRAGAVLGISLEACSSVHLVRNVAPNKEMLCITFQIPAAVL 470 480 490 500 510 520 390 400 410 mKIAA1 YRNQSLSLREFFTMKCGVYYP :.::. gi|194 YKNQTPNPENYEDPPFKRRRTDKAFSEEKTQIASVT 530 540 550 >>gi|194034229|ref|XP_001924855.1| PREDICTED: similar to (440 aa) initn: 2323 init1: 1732 opt: 2276 Z-score: 2744.4 bits: 516.8 E(): 3.7e-144 Smith-Waterman score: 2276; 84.557% identity (96.456% similar) in 395 aa overlap (1-394:26-420) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALRRVALQ :::.::::::.:::::.:::.::.:::.:...::: gi|194 MPEIETNQRDSELFSPPSDVRGMTKLDRAAFKKTVTIPVLKVRKEIVNKLMRSLKKAALQ 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 RPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLELTYEN :::::::::::.::.:::::::::...:.:::.: ::..::.:.::::.:.::::::::: gi|194 RPGIKRVIEDPEDEESRLIMLDPYKIFTSDSFEKEELSILKQLNVSPQISKYNLELTYEN 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 FKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGITSAVNK :::::::.::::::::::::::::::::::::::::::.::::::: .:::::::::::: gi|194 FKSEEILRAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPYKHLIGQVTIDKNPGITSAVNK 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 TSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITELLNPG .:::::::::::::: :::::.:::::::::::::::::::::::::::.::::::.:: gi|194 INNIDNTYRNFQMEVLSGEENMMTKVRENNYTYEFDFSKVYWNPRLSTEHSRITELLKPG 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 DVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNMDGKDF ::::::::::::::::::.::::::::::::::::::::::.::::::::::::.::::: gi|194 DVLFDVFAGVGPFAIPAAKKNCTVFANDLNPESHKWLLHNCKLNKVDQKVKVFNLDGKDF 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 IQGPVREELMLRLGL-SAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLPTVHC .::::::::: .::: : : : ::::::::::::.::: .:.:::::::::.:::: ::: gi|194 LQGPVREELMQQLGLLSKERKHSVHIVMNLPAKAVEFLCAFKSLLDGQPCSSELLPIVHC 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 YCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLYRNQS : ::::..:::::.::: .:::::::. :::::::::::::::::::::::.:.::.::. gi|194 YSFSKDANPAKDVQQQAGTVLGVSLEACSSVHLVRNVAPNKEMLCITFQIPAAVLYKNQT 370 380 390 400 410 420 400 410 mKIAA1 LSLREFFTMKCGVYYP gi|194 ENQETHDDPPLKRQRTDRDF 430 440 >>gi|55640897|ref|XP_522871.1| PREDICTED: tRNA-(N1G37) m (537 aa) initn: 2309 init1: 2261 opt: 2261 Z-score: 2725.1 bits: 513.6 E(): 4.4e-143 Smith-Waterman score: 2261; 83.249% identity (96.701% similar) in 394 aa overlap (1-394:113-506) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALR ::::::::::.:::::.:::.:..:::.:. gi|556 KRFSTMPEIETHERETELFSPPSDVRGMTKLDRTAFKKTVNIPVLKVRKEIVSKLMRSLK 90 100 110 120 130 140 40 50 60 70 80 90 mKIAA1 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE :.:::::::.::::::.:..:::::::::...: :::.::::.::..:.::::.:.:::: gi|556 RAALQRPGIRRVIEDPEDKESRLIMLDPYKIFTHDSFEKAELSVLEQLNVSPQISKYNLE 150 160 170 180 190 200 100 110 120 130 140 150 mKIAA1 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT ::::::::::::.:::::::::::::::.:::::::::::::::::::::::.::::::: gi|556 LTYENFKSEEILRAVLPEGQDVTSGFSRIGHIAHLNLRDHQLPFKHLIGQVMIDKNPGIT 210 220 230 240 250 260 160 170 180 190 200 210 mKIAA1 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE ::::: .:::: ::::::::: ::.::.:::::::::::::::::::::::::::.:::: gi|556 SAVNKINNIDNMYRNFQMEVLSGEQNMMTKVRENNYTYEFDFSKVYWNPRLSTEHSRITE 270 280 290 300 310 320 220 230 240 250 260 270 mKIAA1 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNM ::.::::::::::::::::::.:.:::::::::::::::::::.::.::::::::::::. gi|556 LLKPGDVLFDVFAGVGPFAIPVAKKNCTVFANDLNPESHKWLLYNCKLNKVDQKVKVFNL 330 340 350 360 370 380 280 290 300 310 320 330 mKIAA1 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP :::::.::::.:::: :::: : :::::.:::::::::::::.:. ::::::::.:.:: gi|556 DGKDFLQGPVKEELMQLLGLSKERKPSVHVVMNLPAKAIEFLSAFKWLLDGQPCSSEFLP 390 400 410 420 430 440 340 350 360 370 380 390 mKIAA1 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY :::: ::::..::.::::.: ::::.:::. :::::::::::::::::::::::...:: gi|556 IVHCYSFSKDANPAEDVRQRAGAVLGISLEACSSVHLVRNVAPNKEMLCITFQIPASVLY 450 460 470 480 490 500 400 410 mKIAA1 RNQSLSLREFFTMKCGVYYP .::. gi|556 KNQTRNPENHEDPPLKRQRTAEAFSDEKTQIASNT 510 520 530 >>gi|80478626|gb|AAI08285.1| TRM5 tRNA methyltransferase (509 aa) initn: 2303 init1: 2255 opt: 2255 Z-score: 2718.2 bits: 512.2 E(): 1.1e-142 Smith-Waterman score: 2255; 82.995% identity (96.701% similar) in 394 aa overlap (1-394:85-478) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALR ::::::::::.:::::.:::.:..:::.:. gi|804 KRFSTMPETETHERETELFSPPSDVRGMTKLDRTAFKKTVNIPVLKVRKEIVSKLMRSLK 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE :.:::::::.::::::.:..:::::::::...: :::.::::.::..:.::::.:.:::: gi|804 RAALQRPGIRRVIEDPEDKESRLIMLDPYKIFTHDSFEKAELSVLEQLNVSPQISKYNLE 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA1 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT ::::.:::::::.:::::::::::::::.:::::::::::::::::::::::.::::::: gi|804 LTYEHFKSEEILRAVLPEGQDVTSGFSRIGHIAHLNLRDHQLPFKHLIGQVMIDKNPGIT 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA1 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE ::::: .:::: ::::::::: ::.::.:::::::::::::::::::::::::::.:::: gi|804 SAVNKINNIDNMYRNFQMEVLSGEQNMMTKVRENNYTYEFDFSKVYWNPRLSTEHSRITE 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA1 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNM ::.::::::::::::::::::.:.:::::::::::::::::::.::.::::::::::::. gi|804 LLKPGDVLFDVFAGVGPFAIPVAKKNCTVFANDLNPESHKWLLYNCKLNKVDQKVKVFNL 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA1 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP :::::.::::.:::: :::: : :::::.:::::::::::::.:. ::::::::.:.:: gi|804 DGKDFLQGPVKEELMQLLGLSKERKPSVHVVMNLPAKAIEFLSAFKWLLDGQPCSSEFLP 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA1 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY :::: ::::..::.::::.: ::::.:::. :::::::::::::::::::::::...:: gi|804 IVHCYSFSKDANPAEDVRQRAGAVLGISLEACSSVHLVRNVAPNKEMLCITFQIPASVLY 420 430 440 450 460 470 400 410 mKIAA1 RNQSLSLREFFTMKCGVYYP .::. gi|804 KNQTRNPENHEDPPLKRQRTAEAFSDEKTQIVSNT 480 490 500 >>gi|145559536|sp|Q32P41.2|TRMT5_HUMAN RecName: Full=tRN (509 aa) initn: 2292 init1: 2244 opt: 2244 Z-score: 2704.9 bits: 509.7 E(): 5.9e-142 Smith-Waterman score: 2244; 82.741% identity (96.447% similar) in 394 aa overlap (1-394:85-478) 10 20 30 mKIAA1 LDRTAFKKTVSIPVLKARKEVVNRLMRALR ::::::::::.:::::.:::.:..:::.:. gi|145 KRFSTMPETETHERETELFSPPSDVRGMTKLDRTAFKKTVNIPVLKVRKEIVSKLMRSLK 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 RVALQRPGIKRVIEDPKDEDSRLIMLDPYRMLTADSFDKAELGVLKELDVSPQLSQYNLE :.:::::::.::::::.:..:::::::::...: :::.::::.::..:.::::.:.:::: gi|145 RAALQRPGIRRVIEDPEDKESRLIMLDPYKIFTHDSFEKAELSVLEQLNVSPQISKYNLE 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA1 LTYENFKSEEILKAVLPEGQDVTSGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGIT ::::.:::::::.:::::::::::::::.::::::::::::: :::::::::.::::::: gi|145 LTYEHFKSEEILRAVLPEGQDVTSGFSRIGHIAHLNLRDHQLSFKHLIGQVMIDKNPGIT 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA1 SAVNKTSNIDNTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE ::::: .:::: ::::::::: ::.::.:::::::::::::::::::::::::::.:::: gi|145 SAVNKINNIDNMYRNFQMEVLSGEQNMMTKVRENNYTYEFDFSKVYWNPRLSTEHSRITE 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA1 LLNPGDVLFDVFAGVGPFAIPAARKNCTVFANDLNPESHKWLLHNCQLNKVDQKVKVFNM ::.::::::::::::::::::.:.:::::::::::::::::::.::.::::::::::::. gi|145 LLKPGDVLFDVFAGVGPFAIPVAKKNCTVFANDLNPESHKWLLYNCKLNKVDQKVKVFNL 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA1 DGKDFIQGPVREELMLRLGLSAEAKPSVHIVMNLPAKAIEFLSVFRSLLDGQPCSTELLP :::::.::::.:::: :::: : :::::.:::::::::::::.:. ::::::::.:.:: gi|145 DGKDFLQGPVKEELMQLLGLSKERKPSVHVVMNLPAKAIEFLSAFKWLLDGQPCSSEFLP 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA1 TVHCYCFSKDSDPAKDVRQQAEAVLGVSLETSSSVHLVRNVAPNKEMLCITFQIPTATLY :::: ::::..::.::::.: ::::.:::. :::::::::::::::::::::::...:: gi|145 IVHCYSFSKDANPAEDVRQRAGAVLGISLEACSSVHLVRNVAPNKEMLCITFQIPASVLY 420 430 440 450 460 470 400 410 mKIAA1 RNQSLSLREFFTMKCGVYYP .::. gi|145 KNQTRNPENHEDPPLKRQRTAEAFSDEKTQIVSNT 480 490 500 410 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 01:58:38 2009 done: Sat Mar 14 02:05:07 2009 Total Scan time: 883.730 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]