# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbr06207.fasta.nr -Q ../query/mKIAA0072.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0072, 497 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921251 sequences Expectation_n fit: rho(ln(x))= 5.2596+/-0.000181; mu= 10.5615+/- 0.010 mean_var=69.1967+/-13.806, 0's: 27 Z-trim: 28 B-trim: 2986 in 1/65 Lambda= 0.154181 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|52783230|sp|Q8BJY1.4|PSMD5_MOUSE RecName: Full= ( 504) 3142 708.0 1.4e-201 gi|26347233|dbj|BAC37265.1| unnamed protein produc ( 504) 3130 705.4 9.2e-201 gi|149038941|gb|EDL93161.1| proteasome (prosome, m ( 504) 3066 691.1 1.8e-196 gi|3122657|sp|Q16401.3|PSMD5_HUMAN RecName: Full=2 ( 504) 2899 654.0 2.7e-185 gi|158255538|dbj|BAF83740.1| unnamed protein produ ( 504) 2897 653.5 3.7e-185 gi|114626391|ref|XP_520224.2| PREDICTED: proteasom ( 504) 2893 652.6 6.8e-185 gi|66773843|sp|Q5IFJ8.3|PSMD5_MACFA RecName: Full= ( 504) 2887 651.3 1.7e-184 gi|194225690|ref|XP_001501707.2| PREDICTED: simila ( 504) 2873 648.2 1.5e-183 gi|122143228|sp|Q0P5A6.1|PSMD5_BOVIN RecName: Full ( 503) 2870 647.5 2.3e-183 gi|73972029|ref|XP_531929.2| PREDICTED: similar to ( 523) 2804 632.9 6.4e-179 gi|126294022|ref|XP_001364758.1| PREDICTED: simila ( 504) 2672 603.5 4.3e-170 gi|148676681|gb|EDL08628.1| proteasome (prosome, m ( 439) 2606 588.8 1e-165 gi|60098827|emb|CAH65244.1| hypothetical protein [ ( 504) 2416 546.5 5.9e-153 gi|170284974|gb|AAI61160.1| Proteasome (prosome, m ( 505) 2208 500.3 5e-139 gi|56789608|gb|AAH88711.1| LOC496243 protein [Xeno ( 502) 2153 488.0 2.4e-135 gi|148676680|gb|EDL08627.1| proteasome (prosome, m ( 330) 2124 481.5 1.5e-133 gi|149038942|gb|EDL93162.1| proteasome (prosome, m ( 330) 2075 470.6 2.9e-130 gi|210147423|ref|NP_001017573.2| proteasome 26S no ( 505) 1967 446.7 6.9e-123 gi|50369289|gb|AAH76043.1| Zgc:110116 protein [Dan ( 494) 1958 444.7 2.7e-122 gi|194381144|dbj|BAG64140.1| unnamed protein produ ( 461) 1912 434.4 3.1e-119 gi|224073857|ref|XP_002187706.1| PREDICTED: protea ( 375) 1871 425.2 1.4e-116 gi|73971550|ref|XP_853353.1| PREDICTED: similar to ( 509) 1790 407.3 4.9e-111 gi|14714982|gb|AAH10650.1| Psmd5 protein [Mus musc ( 217) 1399 320.1 3.7e-85 gi|210101679|gb|EEA49741.1| hypothetical protein B ( 503) 1349 309.2 1.6e-81 gi|210108393|gb|EEA56294.1| hypothetical protein B ( 503) 1338 306.8 9e-81 gi|47215138|emb|CAG12429.1| unnamed protein produc ( 466) 1306 299.6 1.2e-78 gi|148676682|gb|EDL08629.1| proteasome (prosome, m ( 222) 1216 279.4 6.8e-73 gi|198420667|ref|XP_002129100.1| PREDICTED: simila ( 509) 1088 251.2 5e-64 gi|156545726|ref|XP_001605001.1| PREDICTED: hypoth ( 504) 978 226.7 1.1e-56 gi|156213543|gb|EDO34558.1| predicted protein [Nem ( 505) 968 224.5 5.4e-56 gi|91091868|ref|XP_969098.1| PREDICTED: similar to ( 499) 954 221.3 4.6e-55 gi|62531331|gb|AAH92738.1| Zgc:110116 [Danio rerio ( 291) 944 219.0 1.4e-54 gi|194033945|ref|XP_001925536.1| PREDICTED: simila ( 408) 924 214.6 4e-53 gi|110764926|ref|XP_001120302.1| PREDICTED: simila ( 443) 901 209.5 1.5e-51 gi|115754834|ref|XP_793127.2| PREDICTED: similar t ( 358) 879 204.6 3.7e-50 gi|149038943|gb|EDL93163.1| proteasome (prosome, m ( 133) 835 194.5 1.5e-47 gi|215492598|gb|EEC02239.1| 26S proteasome regulat ( 319) 732 171.8 2.3e-40 gi|212514786|gb|EEB17036.1| 26S proteasome non-ATP ( 492) 724 170.2 1.1e-39 gi|66347407|emb|CAI95117.1| proteasome (prosome, m ( 157) 677 159.4 6.4e-37 gi|108870463|gb|EAT34688.1| conserved hypothetical ( 414) 654 154.6 4.8e-35 gi|108872668|gb|EAT36893.1| conserved hypothetical ( 489) 647 153.0 1.6e-34 gi|167879030|gb|EDS42413.1| conserved hypothetical ( 487) 625 148.2 4.8e-33 gi|194163663|gb|EDW78564.1| GK16123 [Drosophila wi ( 499) 567 135.3 3.8e-29 gi|194146611|gb|EDW62330.1| GJ16670 [Drosophila vi ( 501) 559 133.5 1.3e-28 gi|193907108|gb|EDW05975.1| GI16181 [Drosophila mo ( 499) 558 133.3 1.5e-28 gi|190618920|gb|EDV34444.1| GF21324 [Drosophila an ( 507) 555 132.6 2.4e-28 gi|168984440|emb|CAQ11712.1| proteasome (prosome, ( 139) 543 129.6 5.4e-28 gi|198146983|gb|EDY73010.1| GA23967 [Drosophila ps ( 506) 547 130.8 8.3e-28 gi|190649952|gb|EDV47230.1| GG17761 [Drosophila er ( 504) 542 129.7 1.8e-27 gi|194187956|gb|EDX01540.1| GE17050 [Drosophila ya ( 504) 537 128.6 3.9e-27 >>gi|52783230|sp|Q8BJY1.4|PSMD5_MOUSE RecName: Full=26S (504 aa) initn: 3142 init1: 3142 opt: 3142 Z-score: 3775.1 bits: 708.0 E(): 1.4e-201 Smith-Waterman score: 3142; 99.799% identity (99.799% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|527 MAAQAVSLLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|527 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|527 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|527 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|527 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|527 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|527 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|527 IADQPWAQRLMFNSPGFVEFVMDRSVEHDKASKDAKYELVKALANSKTVAEIFGNSNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD :::::::::::::::::::::::: gi|527 LRAYLSEGPYYVKPVATTAVEGAD 490 500 >>gi|26347233|dbj|BAC37265.1| unnamed protein product [M (504 aa) initn: 3130 init1: 3130 opt: 3130 Z-score: 3760.7 bits: 705.4 E(): 9.2e-201 Smith-Waterman score: 3130; 99.598% identity (99.598% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MAAQAVSLLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|263 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAVLEALFESNLLDDLKNVMKTNDV 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|263 IADQPWAQRLMFNSPGFVEFVMDRSVEHDKASKDAKYELVKALANSKTVAEIFGNSNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD :::::::::::::::::::::::: gi|263 LRAYLSEGPYYVKPVATTAVEGAD 490 500 >>gi|149038941|gb|EDL93161.1| proteasome (prosome, macro (504 aa) initn: 3066 init1: 3066 opt: 3066 Z-score: 3683.7 bits: 691.1 E(): 1.8e-196 Smith-Waterman score: 3066; 96.579% identity (99.195% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MAAQAVSLLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::. gi|149 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVEDSEAVTEV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV :.:::::.:.: :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LSNAELLRQVVCCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|149 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR : :::::::::::::::::::::::::::::::::::::::.: :.:::::::::::::: gi|149 FAMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERLLTRIGYQAKNASTELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSVSRDSLELFRGISNQPFPELHCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::.:::::.:::::::::::::::::: ::.::::::::::::::::::::::::::::: gi|149 IANQPWAQKLMFNSPGFVEFVMDRSVEHDKTSKDAKYELVKALANSKTVAEIFGNSNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD ::.::::::::::::::::::::: gi|149 LRTYLSEGPYYVKPVATTAVEGAD 490 500 >>gi|3122657|sp|Q16401.3|PSMD5_HUMAN RecName: Full=26S p (504 aa) initn: 2957 init1: 2899 opt: 2899 Z-score: 3483.0 bits: 654.0 E(): 2.7e-185 Smith-Waterman score: 2899; 89.940% identity (97.787% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ ::::::::::::::::::.::.:::::.:::.::::::: :::::::.:.::. gi|312 MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI :.::::::::::::.::.:.:::::.:::::: ::::::: :::::::::::::.::::: gi|312 TTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::. gi|312 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG ::::::::::.::::: ::::::::::::::::.:::::::::::::::::::::::::: gi|312 VRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV ::::::::::::::::::::::::::.:::::::::::::::::::::::::::.:.::: gi|312 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPIFVEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR ::: .:::::::::::::::::::.::::::::::::::::.:::.:.:.::: .::::: gi|312 FEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGTRFERLLMRIGHQSKNAPVELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA ::::.:::::: :::::::.: ::::::::.::: ::::::::.:::::::::::::::: gi|312 CLDAISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::.:::::.::::::::::.:.::::: ::::::::::::::::::::.:::::: :::: gi|312 IANQPWAQKLMFNSPGFVEYVVDRSVEHDKASKDAKYELVKALANSKTIAEIFGNPNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD ::.::::::::::::.:::::::. gi|312 LRTYLSEGPYYVKPVSTTAVEGAE 490 500 >>gi|158255538|dbj|BAF83740.1| unnamed protein product [ (504 aa) initn: 2954 init1: 2897 opt: 2897 Z-score: 3480.6 bits: 653.5 E(): 3.7e-185 Smith-Waterman score: 2897; 89.940% identity (97.787% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ ::::::::::::::::::.::.:::::.:::.::::::: :::::::.:.::. gi|158 MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELRRQAAELRLGPLFSLLNENHREK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI :.::::::::::::.::.:.:::::.:::::: ::::::: :::::::::::::.::::: gi|158 TTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::. gi|158 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG ::::::::::.::::: ::::::::::::::::.:::::::::::::::::::::::::: gi|158 VRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV ::::::::::::::::::::::::::.:::::::::::::::::::::::::::.:.::: gi|158 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPIFVEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR ::: .:::::::::::::::::::.::::::::::::::::.:::.:.:.::: .::::: gi|158 FEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGTRFERLLMRIGHQSKNAPVELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA ::::.:::::: :::::::.: ::::::::.::: ::::::::.:::::::::::::::: gi|158 CLDAISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::.:::::.::::::::::.:.::::: ::::::::::::::::::::.:::::: :::: gi|158 IANQPWAQKLMFNSPGFVEYVVDRSVEHDKASKDAKYELVKALANSKTIAEIFGNPNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD ::.::::::::::::.:::::::. gi|158 LRTYLSEGPYYVKPVSTTAVEGAE 490 500 >>gi|114626391|ref|XP_520224.2| PREDICTED: proteasome 26 (504 aa) initn: 2951 init1: 2893 opt: 2893 Z-score: 3475.8 bits: 652.6 E(): 6.8e-185 Smith-Waterman score: 2893; 89.738% identity (97.787% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ ::::::::::::::::::.::.:::::.:::.::::::: :::::::.:.::. gi|114 MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI :.::::::::::::.::.:.:::::.:::::: ::::::: :::::::::::::.::::: gi|114 TTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::. gi|114 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG ::::::::::.::::: ::::::::::::::::.:::::::::::::::::::::::::: gi|114 VRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV ::::::::::::::::::::::::::.:::::::::::::::::::::::::::.:.::: gi|114 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPIFVEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR ::: .:::::::::::::::::::.::::::::::::::::.:::.:.:.::: .::::: gi|114 FEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGTRFERLLMRIGHQSKNAPVELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA ::::.:::::: :::::::.: ::::::::.::: ::::::::.:::::::::::::::: gi|114 CLDAISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::.:::::.::::::::::.:.::::: ::::::::::::::::.:::.:::::: :::: gi|114 IANQPWAQKLMFNSPGFVEYVVDRSVEHDKASKDAKYELVKALASSKTIAEIFGNPNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD ::.::::::::::::.:::::::. gi|114 LRTYLSEGPYYVKPVSTTAVEGAE 490 500 >>gi|66773843|sp|Q5IFJ8.3|PSMD5_MACFA RecName: Full=26S (504 aa) initn: 2945 init1: 2887 opt: 2887 Z-score: 3468.6 bits: 651.3 E(): 1.7e-184 Smith-Waterman score: 2887; 89.336% identity (97.586% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ ::::::::::::::::::.::.:::::.::::::::::: :::::::.:.::. gi|667 MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELREQAAELRLGPLFSLLNENHREK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI ::::::::::::::.::.:.:::::.:::::: ::::::: :::::::::::::.::::: gi|667 TALCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::. gi|667 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG :::::::::..::::: ::::::::::::::::.:::::::::::::::::::::::::: gi|667 VRYRVYELIVEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV ::::::::::::::::::::::::::.:::::::::::::::::::::::::::.:.::: gi|667 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPIFVEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR :::..:::::: ::::::::::::.::::::::::::::::.:::.:.:.::: .::::: gi|667 FEMTESQDPTMTGVAVDTVGILGSNVEGKQVLQKTGTRFERLLMRIGHQSKNAPVELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA ::::.:::::: :::::::.: :::::::..::: ::::::::.:::::::::::::::: gi|667 CLDAISSLLYLPPEQQTDDLLRMTESWFSALSRDPLELFRGISSQPFPELHCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::.:::::.:::: :::::.:.::::: ::.:::::::::::::::::.:::::: :::: gi|667 IANQPWAQKLMFNIPGFVEYVVDRSVEQDKSSKDAKYELVKALANSKTIAEIFGNPNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD ::.::::::::::::.:::::::. gi|667 LRTYLSEGPYYVKPVSTTAVEGAE 490 500 >>gi|194225690|ref|XP_001501707.2| PREDICTED: similar to (504 aa) initn: 2932 init1: 2873 opt: 2873 Z-score: 3451.7 bits: 648.2 E(): 1.5e-183 Smith-Waterman score: 2873; 88.531% identity (97.586% similar) in 497 aa overlap (1-497:8-504) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ :::::.:::::::::::::::.:.::: :::::::::.: ::::::..:.::: gi|194 MAAQALALLREVSRLEAPLEELRALQSVLQSVPLSELREQAAELHLGPLFSLLHENHREQ 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI :::::::::::::::::.:.::::. :::::::::.:::: :::::.:::::::.::::: gi|194 TALCVSILERLLQAVEPVHVARNLKGDLQRGLTHPSDSVKILTLSQVGRIVENSDAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::. gi|194 LNNAELLKQVVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDI 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG :::::::::..::::: ::::::.:::::::::.::::::::::::::: ::::: :::: gi|194 VRYRVYELIVEISSVSPESLNYCATSGLVTQLLRELTGEDVLVRATCIETVTSLASTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV ::::::::::::::::::::::::::.::::::::::::::.::::::.:::::.:.::: gi|194 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAIMDSPQQVCERYPAFVEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR :::..::::::.::::::.:::::.::::::::::::::::.:...:::::::::::::: gi|194 FEMTESQDPTMVGVAVDTIGILGSNVEGKQVLQKTGTRFERLLVKIGYQAKNASTELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA ::::.:::::: :::::::.: ::::::::.::: :::::::::::::.:.::::::::: gi|194 CLDALSSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISNQPFPDLRCAALKVFTA 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::::::::.::::::::::.::::::: ::::::::::::::::::::.:::::: :::: gi|194 IADQPWAQKLMFNSPGFVEYVMDRSVERDKASKDAKYELVKALANSKTIAEIFGNPNYLR 430 440 450 460 470 480 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD ::.:::::::::::..:::::::. gi|194 LRTYLSEGPYYVKPISTTAVEGAE 490 500 >>gi|122143228|sp|Q0P5A6.1|PSMD5_BOVIN RecName: Full=26S (503 aa) initn: 2914 init1: 2122 opt: 2870 Z-score: 3448.1 bits: 647.5 E(): 2.3e-183 Smith-Waterman score: 2870; 88.732% identity (97.586% similar) in 497 aa overlap (1-497:8-503) 10 20 30 40 50 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQ :::::.::::::::::::::..:.::: ::::::::::: :::::::.:.::: gi|122 MAAQALALLREVSRLEAPLEELRALQSLLQSVPLSELREQAAELRLGPLFSLLNENHREQ 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSEAVTEI :.::::::::::::.::.:.:::::.:::::::::.:::: :::::.:::::::.::::: gi|122 TTLCVSILERLLQALEPVHVARNLRVDLQRGLTHPNDSVKILTLSQVGRIVENSDAVTEI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKNVMKTNDV :::::::::::::::::::::::.::::::::::::::::::::::::::::.::::::. gi|122 LNNAELLKQIVYCIGGENLSVAKTAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 VRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVRATCIEMVTSLAYTHHG :::::::::..::::: :::: :::::::::::.::::::::::::::::::::: :::: gi|122 VRYRVYELIVEISSVSPESLNCCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLACTHHG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 RQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKV :::::::::::::::::::::.::::.::::::::::::::.::::::::::::.:.::: gi|122 RQYLAQEGVIDQISNIIVGADADPFSSFYLPGFVKFFGNLAIMDSPQQICERYPIFMEKV 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAKNASTELKIR :::..:::::::::::::.:::::.::::::::::::::::.::..:::::::::::::: gi|122 FEMTESQDPTMIGVAVDTIGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNASTELKIR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 CLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISNQPFPELHCAALKVFTA ::::.:::.:: ::: :::.: ::::::::.::: ::::::::::::::::::::::::: gi|122 CLDALSSLFYLPPEQ-TDDLLRMTESWFSSLSRDPLELFRGISNQPFPELHCAALKVFTA 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 IADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALANSKTVAEIFGNSNYLR ::.:::::.::::::::::.::::::: ::::::::::::::::::::.:::::: :::: gi|122 IANQPWAQKLMFNSPGFVEYVMDRSVEHDKASKDAKYELVKALANSKTIAEIFGNPNYLR 420 430 440 450 460 470 480 490 mKIAA0 LRAYLSEGPYYVKPVATTAVEGAD ::.:::::::::::..:::::::. gi|122 LRTYLSEGPYYVKPISTTAVEGAE 480 490 500 >>gi|73972029|ref|XP_531929.2| PREDICTED: similar to 26S (523 aa) initn: 2869 init1: 2804 opt: 2804 Z-score: 3368.5 bits: 632.9 E(): 6.4e-179 Smith-Waterman score: 2804; 87.347% identity (97.143% similar) in 490 aa overlap (8-497:34-523) 10 20 30 mKIAA0 LLREVARLEAPLEELRALQSVVQAVPLHELREQAAEL ::.::::::::.::.:.::: ::: :::: gi|739 RRRFTRVWPGSRRPTASAPPGAGAAAGAVALEVPLEELRALHSVLQTVPLGELRAPAAEL 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA0 RLRPLFSLLNQNNREQTALCVSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTL :: ::::::....::::.::::::::::::.::.:.:::: :::.:::::::::: ::: gi|739 RLGPLFSLLHEDHREQTTLCVSILERLLQAMEPVHIARNLGADLQKGLTHPDDSVKILTL 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA0 SQIGRIVENSEAVTEILNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFE ::.:::::::.::::::::.::::::::::::.:::::::::::::.::::::::::::: gi|739 SQVGRIVENSDAVTEILNNGELLKQIVYCIGGDNLSVAKAAIKSLSKISLTQAGLEALFE 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA0 SNLLDDLKNVMKTNDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGEDVLVR :::::::: ::::::.:::::::::..::::: :::.::::::::::::.:::::::::: gi|739 SNLLDDLKRVMKTNDIVRYRVYELIVEISSVSPESLTYCTTSGLVTQLLRELTGEDVLVR 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA0 ATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMD ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::.:: gi|739 ATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAIMD 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA0 SPQQICERYPVFLEKVFEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLM ::::::::::::.::::::..:::::::::::::::::::..:::::::::::::::.:: gi|739 SPQQICERYPVFVEKVFEMTESQDPTMIGVAVDTVGILGSNIEGKQVLQKTGTRFERLLM 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA0 RVGYQAKNASTELKIRCLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELFRGISN ..::::::::::::::::::.::..:. :::::.:.: :::::::..::: ::::::::: gi|739 KIGYQAKNASTELKIRCLDAISSIFYIPPEQQTEDLLRMTESWFSALSRDPLELFRGISN 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA0 QPFPELHCAALKVFTAIADQPWAQRLMFNSPGFVEFVMDRSVELDKASKDAKYELVKALA ::::::::::::::::::.:::::.::::::::::.::::::: :::::::::::::::: gi|739 QPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDKASKDAKYELVKALA 430 440 450 460 470 480 460 470 480 490 mKIAA0 NSKTVAEIFGNSNYLRLRAYLSEGPYYVKPVATTAVEGAD ::::::::::: ::::::.:::::::::::..:::::::. gi|739 NSKTVAEIFGNPNYLRLRTYLSEGPYYVKPISTTAVEGAE 490 500 510 520 497 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 18:01:39 2009 done: Thu Mar 12 18:08:43 2009 Total Scan time: 950.700 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]