FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1492.ptfa, 717 aa vs ./tmplib.26680 library 1768300 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.5097+/-0.00391; mu= 22.4024+/- 0.262 mean_var=67.5503+/-15.312, 0's: 0 Z-trim: 2 B-trim: 136 in 1/35 Lambda= 0.1560 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00334 ( 835 res) mth00885 ( 835) 249 66 2.1e-11 >>mFLJ00334 ( 835 res) mth00885 (835 aa) initn: 332 init1: 148 opt: 249 Z-score: 297.0 bits: 65.7 E(): 2.1e-11 Smith-Waterman score: 464; 24.203% identity (29.663% ungapped) in 690 aa overlap (132-702:154-835) 110 120 130 140 150 mKIAA1 QYAAWGVQGQQLIYIFENNIYYQPDIKSSSLRLTSSGKEGIIFN----GIADWLYEEELL : . .:. :.. : :.: .. .::. mFLJ00 KICPADPAFFSFINNSDLWVANIETGEERRLTFCHQGSAGVLDNPKSAGVATFVIQEEF- 130 140 150 160 170 180 160 170 180 190 200 mKIAA1 HSHIAHWWSP----DGE------RLAFLMINDSLVPNMIIPRFTGALYP-KAKQYPYPKA . :: : .: :. . ...: : . .: . :: :. .: ::.. mFLJ00 DRFTGCWWCPTASWEGSEGLKTLRILYEEVDESEVEVIHVP--SPALEERKTDSYRYPRT 190 200 210 220 230 240 210 220 230 240 250 mKIAA1 GQANPSVKLYVVNLYGPTH-------TLELMPP--DIFKSREYYITMVKWVSNTRTV-VR :. ::.. : ...: . ::. : ..: . :: :. . :. . . . . mFLJ00 GSKNPKIALKLAELQTDHQGKIVSSCEKELVQPFSSLFPKVEY-IARAGWTRDGKYAWAM 250 260 270 280 290 260 270 280 290 mKIAA1 WLNRPQNISILTL-----------CESTTGACSRK----------YEMTSDTWLSKQN-E .:.:::. :.: :. : .: :: ....:.. .. mFLJ00 FLDRPQQRLQLVLLPPALFIPAVESEAQRQAAARAVPKNVQPFVIYEEVTNVWINVHDIF 300 310 320 330 340 350 300 310 320 330 mKIAA1 EPVFSRDGSKFFMTVPVKQGGRGEFHHIAMFLVQSKSE---------------QITVRH- .: . .:.. : . ... : : :. :. :.. . ... mFLJ00 HPFPQAEGQQDFCFLRANECKTG-FCHLYRVTVELKTKDYDWTEPLSPTEDEFKCPIKEE 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA1 --LTSGNWEVIR----ILAYDETTQKIYFLSTESSPQGRQLYSASTE--GLLNRDCISCN ::::.:::. . .: :. .:: .:...: ..:: .: : : . : . . mFLJ00 VALTSGEWEVLSRHGSKIWVNEQTKLVYFQGTKDTPLEHHLYVVSYESAGEIVR-LTTLG 420 430 440 450 460 470 400 410 420 430 440 mKIAA1 FMKEDCTYFDASFSPMNQHFLLFCEGPKVPVVSLH-ITDNPSRYFLLENNSVMKETIQKK :.. .:.. . ::. . .:. : : : .: :.: . :.:. . mFLJ00 FFH-SCSM-SQSFDMFVSHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAANCPP 480 490 500 510 520 530 450 460 470 480 490 500 mKIAA1 KLAKRETRILHID-DYELPLQLSFPKDFMEKNQYALLLIMDEEPGGQMVTDKFH-VDWDS . : .: : .: .. :. .. .. .:.. : :.:...:. . . mFLJ00 DYVPPEIFHFHTRADVQLYGMIYKPHTLQPGRKHPTVLFVYGGPQVQLVNNSFKGIKYLR 540 550 560 570 580 590 510 520 530 540 550 560 mKIAA1 V-LIDTDNVIVARFDGRGSGFQGLKVLQEIHRRIGSVEAKDQVAAVKYLL-KQPYIDSKR . . . . :. .::::: .::. .. ..:.:: .::: ...:. : .:: .: mFLJ00 LNTLASLGYAVVVIDGRGSCQRGLHFEGALKNQMGQVEIEDQVEGLQYVAEKYGFIDLSR 600 610 620 630 640 650 570 580 590 mKIAA1 LSIFGKGYGGYIASM-------ILKSDEK-----FFKC---------------------- ..: : .:::... : .... . .. : mFLJ00 VAIHGWSYGGFLSLMGLIHKPQVVQAAPRGRVPLLIACHHRPQDGIRQQLYVGGQARDPR 660 670 680 690 700 710 600 610 620 630 640 mKIAA1 --GAVVA----PISDMKLYASAFSERYLGMPSKEESTYQASSVLHNIHGLKEE--NLLII :: :: :.. : ....:::. .: .... :.:.:: ... : .: :::. mFLJ00 LGGAEVAIAGAPVTVWMAYDTGYTERYMDVPENNQQGYEAGSVALHVEKLPNEPNRLLIL 720 730 740 750 760 770 650 660 670 680 690 700 mKIAA1 HGTADTKVHFQHSAELIKHLIKAGVNYTLQVYPDEGYHIS-DKSKHHFYSTILRFFSDCL :: : .::: :. :...::.:: : ::.::.: . : .: .:. :.:.:... : mFLJ00 HGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCRESGEHYEVTLLHFLQEHL 780 790 800 810 820 830 710 mKIAA1 KEEVSVLPQEPEEDE 717 residues in 1 query sequences 1768300 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:46:32 2006 done: Mon Mar 27 10:46:33 2006 Scan time: 0.800 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]