# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbr03055.fasta.nr -Q ../query/mKIAA0130.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0130, 318 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921246 sequences Expectation_n fit: rho(ln(x))= 5.0017+/-0.00018; mu= 10.3545+/- 0.010 mean_var=65.5268+/-12.766, 0's: 32 Z-trim: 34 B-trim: 0 in 0/67 Lambda= 0.158440 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81880096|sp|Q99K74.1|MED24_MOUSE RecName: Full= ( 987) 2093 487.3 5.2e-135 gi|148684214|gb|EDL16161.1| thyroid hormone recept (1001) 2093 487.3 5.2e-135 gi|151358015|emb|CAO77992.1| mediator complex subu (1006) 2093 487.3 5.3e-135 gi|5359714|gb|AAD42776.1|AF126543_1 100 kDa thyroi ( 956) 2066 481.1 3.6e-133 gi|81907913|sp|Q4V8B3.1|MED24_RAT RecName: Full=Me ( 987) 2066 481.1 3.7e-133 gi|149054127|gb|EDM05944.1| thyroid hormone recept (1006) 2066 481.1 3.8e-133 gi|149723866|ref|XP_001500771.1| PREDICTED: mediat ( 976) 2035 474.0 5e-131 gi|149723864|ref|XP_001500748.1| PREDICTED: mediat ( 989) 2035 474.0 5.1e-131 gi|73966040|ref|XP_863358.1| PREDICTED: similar to ( 962) 2025 471.7 2.4e-130 gi|73966042|ref|XP_863384.1| PREDICTED: similar to ( 969) 2025 471.7 2.4e-130 gi|73966038|ref|XP_851230.1| PREDICTED: similar to ( 989) 2025 471.7 2.5e-130 gi|73966044|ref|XP_537650.2| PREDICTED: similar to (1008) 2025 471.7 2.5e-130 gi|114667599|ref|XP_001170889.1| PREDICTED: thyroi ( 889) 2016 469.6 9.5e-130 gi|194383492|dbj|BAG64717.1| unnamed protein produ ( 899) 2016 469.6 9.6e-130 gi|194389514|dbj|BAG61718.1| unnamed protein produ ( 930) 2016 469.6 9.8e-130 gi|114667597|ref|XP_001170942.1| PREDICTED: thyroi ( 935) 2016 469.6 9.9e-130 gi|158255516|dbj|BAF83729.1| unnamed protein produ ( 976) 2016 469.7 1e-129 gi|168278517|dbj|BAG11138.1| thyroid hormone recep ( 989) 2016 469.7 1e-129 gi|21617826|sp|O75448.1|MED24_HUMAN RecName: Full= ( 989) 2016 469.7 1e-129 gi|8699628|gb|AAF78764.1|AF277379_1 vitamin D rece ( 989) 2016 469.7 1e-129 gi|114667587|ref|XP_001170905.1| PREDICTED: thyroi (1001) 2016 469.7 1e-129 gi|114667589|ref|XP_001171125.1| PREDICTED: thyroi (1008) 2016 469.7 1e-129 gi|119581033|gb|EAW60629.1| thyroid hormone recept (1014) 2016 469.7 1.1e-129 gi|114667581|ref|XP_511466.2| PREDICTED: thyroid h (1015) 2016 469.7 1.1e-129 gi|119581035|gb|EAW60631.1| thyroid hormone recept (1016) 2016 469.7 1.1e-129 gi|114667579|ref|XP_001170999.1| PREDICTED: thyroi (1035) 2016 469.7 1.1e-129 gi|109114988|ref|XP_001087996.1| PREDICTED: thyroi (1063) 2011 468.5 2.4e-129 gi|194382730|dbj|BAG64535.1| unnamed protein produ ( 566) 2005 467.0 3.8e-129 gi|193785646|dbj|BAG51081.1| unnamed protein produ ( 976) 1997 465.3 2.1e-128 gi|126308172|ref|XP_001370359.1| PREDICTED: simila (1033) 1978 461.0 4.4e-127 gi|82075180|sp|Q5F3M0.1|MED24_CHICK RecName: Full= ( 986) 1861 434.2 4.8e-119 gi|73966046|ref|XP_863425.1| PREDICTED: similar to ( 936) 1646 385.1 2.8e-104 gi|82187375|sp|Q6PI53.1|MED24_XENLA RecName: Full= ( 988) 1568 367.3 6.9e-99 gi|46329689|gb|AAH68408.1| Med24 protein [Danio re ( 984) 1561 365.7 2.1e-98 gi|158706144|sp|Q2PW47.2|MED24_DANRE RecName: Full ( 989) 1561 365.7 2.1e-98 gi|83375896|gb|ABC17786.1| 100 kDa thyroid hormone ( 989) 1561 365.7 2.1e-98 gi|47226019|emb|CAG04393.1| unnamed protein produc ( 960) 1536 359.9 1.1e-96 gi|117306556|gb|AAI26719.1| MED24 protein [Bos tau ( 257) 1482 347.2 2e-93 gi|114667593|ref|XP_001171103.1| PREDICTED: thyroi (1032) 1323 311.3 5.2e-82 gi|194374997|dbj|BAG62611.1| unnamed protein produ ( 821) 1156 273.0 1.3e-70 gi|182627791|gb|ACB88915.1| mediator complex subun ( 292) 863 205.7 8.5e-51 gi|182627799|gb|ACB88919.1| mediator complex subun ( 112) 726 174.1 1.1e-41 gi|182627809|gb|ACB88924.1| mediator complex subun ( 232) 723 173.7 3.1e-41 gi|182627813|gb|ACB88926.1| mediator complex subun ( 139) 695 167.1 1.7e-39 gi|182627805|gb|ACB88922.1| mediator complex subun ( 322) 682 164.4 2.6e-38 gi|182627801|gb|ACB88920.1| mediator complex subun ( 97) 639 154.2 9.2e-36 gi|149535270|ref|XP_001512944.1| PREDICTED: simila ( 587) 508 124.8 4e-26 gi|156546964|ref|XP_001599475.1| PREDICTED: simila ( 985) 482 119.0 3.7e-24 gi|66523978|ref|XP_392006.2| PREDICTED: similar to ( 991) 452 112.2 4.3e-22 gi|215502571|gb|EEC12065.1| mediator of RNA polyme (1007) 452 112.2 4.4e-22 >>gi|81880096|sp|Q99K74.1|MED24_MOUSE RecName: Full=Medi (987 aa) initn: 2093 init1: 2093 opt: 2093 Z-score: 2580.2 bits: 487.3 E(): 5.2e-135 Smith-Waterman score: 2093; 100.000% identity (100.000% similar) in 318 aa overlap (1-318:670-987) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|818 MIRQLAGPLYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS 820 830 840 850 860 870 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG 880 890 900 910 920 930 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL 940 950 960 970 980 >>gi|148684214|gb|EDL16161.1| thyroid hormone receptor a (1001 aa) initn: 2093 init1: 2093 opt: 2093 Z-score: 2580.1 bits: 487.3 E(): 5.2e-135 Smith-Waterman score: 2093; 100.000% identity (100.000% similar) in 318 aa overlap (1-318:684-1001) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|148 MIRQLAGPLYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 660 670 680 690 700 710 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT 720 730 740 750 760 770 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 780 790 800 810 820 830 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS 840 850 860 870 880 890 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG 900 910 920 930 940 950 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL 960 970 980 990 1000 >>gi|151358015|emb|CAO77992.1| mediator complex subunit (1006 aa) initn: 2093 init1: 2093 opt: 2093 Z-score: 2580.1 bits: 487.3 E(): 5.3e-135 Smith-Waterman score: 2093; 100.000% identity (100.000% similar) in 318 aa overlap (1-318:689-1006) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|151 MIRQLAGPLYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 660 670 680 690 700 710 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT 720 730 740 750 760 770 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 780 790 800 810 820 830 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS 840 850 860 870 880 890 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG 900 910 920 930 940 950 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::::::::::::::::: gi|151 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL 960 970 980 990 1000 >>gi|5359714|gb|AAD42776.1|AF126543_1 100 kDa thyroid ho (956 aa) initn: 2066 init1: 2066 opt: 2066 Z-score: 2547.0 bits: 481.1 E(): 3.6e-133 Smith-Waterman score: 2066; 98.428% identity (99.371% similar) in 318 aa overlap (1-318:639-956) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::. gi|535 MIRQLAGPLYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLF 610 620 630 640 650 660 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|535 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT 670 680 690 700 710 720 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|535 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 730 740 750 760 770 780 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|535 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS 790 800 810 820 830 840 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|535 SLSASQLHRVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG 850 860 870 880 890 900 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL .::::::::::::::::::::::.:::::: ::::::::::::::::: gi|535 TILQFMPFTTVSELVKVSAMSSPEVVLAITHLSLPLGRQVAAKAIAAL 910 920 930 940 950 >>gi|81907913|sp|Q4V8B3.1|MED24_RAT RecName: Full=Mediat (987 aa) initn: 2066 init1: 2066 opt: 2066 Z-score: 2546.8 bits: 481.1 E(): 3.7e-133 Smith-Waterman score: 2066; 98.113% identity (99.686% similar) in 318 aa overlap (1-318:670-987) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|819 MIRQLAGPLYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS ::::::::::::::::::::::.:::::::::::::::::::..:::.:::::::::::: gi|819 SSHKGQASSRQKKRHREDIEDYISLFPVEDMQPSKLMRLLSSNEDDASILSSPTDRSMNS 820 830 840 850 860 870 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG :::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::: gi|819 SLSASQLHTVNMRDPLNRVLANLFLLISSVLGSRTAGPHTQFVQWFMEECVDCLEQDSRG 880 890 900 910 920 930 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL 940 950 960 970 980 >>gi|149054127|gb|EDM05944.1| thyroid hormone receptor a (1006 aa) initn: 2066 init1: 2066 opt: 2066 Z-score: 2546.7 bits: 481.1 E(): 3.8e-133 Smith-Waterman score: 2066; 98.113% identity (99.686% similar) in 318 aa overlap (1-318:689-1006) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|149 MIRQLAGPLYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 660 670 680 690 700 710 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT 720 730 740 750 760 770 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 780 790 800 810 820 830 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS ::::::::::::::::::::::.:::::::::::::::::::..:::.:::::::::::: gi|149 SSHKGQASSRQKKRHREDIEDYISLFPVEDMQPSKLMRLLSSNEDDASILSSPTDRSMNS 840 850 860 870 880 890 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG :::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::: gi|149 SLSASQLHTVNMRDPLNRVLANLFLLISSVLGSRTAGPHTQFVQWFMEECVDCLEQDSRG 900 910 920 930 940 950 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL 960 970 980 990 1000 >>gi|149723866|ref|XP_001500771.1| PREDICTED: mediator c (976 aa) initn: 2035 init1: 2035 opt: 2035 Z-score: 2508.6 bits: 474.0 E(): 5e-131 Smith-Waterman score: 2035; 96.541% identity (99.371% similar) in 318 aa overlap (1-318:659-976) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|149 MIRQLAGPLYSENTLQFYNERVVIMSSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 630 640 650 660 670 680 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHIFDTLLHMGGVYWFCNNLIKELLKETRKEHT 690 700 710 720 730 740 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LRAVELLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 750 760 770 780 790 800 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS ::::::::::::::::::::::.::::..:::::::::::::...:::::::::::::.: gi|149 SSHKGQASSRQKKRHREDIEDYISLFPLDDMQPSKLMRLLSSNEEDANILSSPTDRSMSS 810 820 830 840 850 860 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG ::::::::::::::::::::::::::::::::::::::::::::::::::: :::: ::: gi|149 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVDCLEQGSRG 870 880 890 900 910 920 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL 930 940 950 960 970 >>gi|149723864|ref|XP_001500748.1| PREDICTED: mediator c (989 aa) initn: 2035 init1: 2035 opt: 2035 Z-score: 2508.5 bits: 474.0 E(): 5.1e-131 Smith-Waterman score: 2035; 96.541% identity (99.371% similar) in 318 aa overlap (1-318:672-989) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|149 MIRQLAGPLYSENTLQFYNERVVIMSSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 650 660 670 680 690 700 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHIFDTLLHMGGVYWFCNNLIKELLKETRKEHT 710 720 730 740 750 760 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LRAVELLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 770 780 790 800 810 820 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS ::::::::::::::::::::::.::::..:::::::::::::...:::::::::::::.: gi|149 SSHKGQASSRQKKRHREDIEDYISLFPLDDMQPSKLMRLLSSNEEDANILSSPTDRSMSS 830 840 850 860 870 880 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG ::::::::::::::::::::::::::::::::::::::::::::::::::: :::: ::: gi|149 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVDCLEQGSRG 890 900 910 920 930 940 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL 950 960 970 980 >>gi|73966040|ref|XP_863358.1| PREDICTED: similar to Thy (962 aa) initn: 2025 init1: 2025 opt: 2025 Z-score: 2496.4 bits: 471.7 E(): 2.4e-130 Smith-Waterman score: 2025; 96.541% identity (99.057% similar) in 318 aa overlap (1-318:645-962) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|739 MIRQLAGPLYSENTLQFYNERVVIMSSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 620 630 640 650 660 670 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|739 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHIFDTLLHMGGVYWFCNNLIKELLKETRKEHT 680 690 700 710 720 730 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LRAVELLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 740 750 760 770 780 790 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS :::::::::::::::::::::::::::..:::::::::::::...:::::::::::::.: gi|739 SSHKGQASSRQKKRHREDIEDYVSLFPLDDMQPSKLMRLLSSNEEDANILSSPTDRSMSS 800 810 820 830 840 850 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG ::::::::::::::::::::::::::::::::::::::::::::::::::: :::: ::: gi|739 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVDCLEQGSRG 860 870 880 890 900 910 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::: ::::::::::::: gi|739 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLSLGRQVAAKAIAAL 920 930 940 950 960 >>gi|73966042|ref|XP_863384.1| PREDICTED: similar to Thy (969 aa) initn: 2025 init1: 2025 opt: 2025 Z-score: 2496.3 bits: 471.7 E(): 2.4e-130 Smith-Waterman score: 2025; 96.541% identity (99.057% similar) in 318 aa overlap (1-318:652-969) 10 20 30 mKIAA0 HMCADVLQQTATQIKFPSTGVDTMPYWNLL :::::::::::::::::::::::::::::: gi|739 MIRQLAGPLYSENTLQFYNERVVIMSSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLL 630 640 650 660 670 680 40 50 60 70 80 90 mKIAA0 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHT ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|739 PPKRPIKEVLTDIFAKVLEKGWVDSRSIHIFDTLLHMGGVYWFCNNLIKELLKETRKEHT 690 700 710 720 730 740 100 110 120 130 140 150 mKIAA0 LRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LRAVELLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSY 750 760 770 780 790 800 160 170 180 190 200 210 mKIAA0 SSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNS :::::::::::::::::::::::::::..:::::::::::::...:::::::::::::.: gi|739 SSHKGQASSRQKKRHREDIEDYVSLFPLDDMQPSKLMRLLSSNEEDANILSSPTDRSMSS 810 820 830 840 850 860 220 230 240 250 260 270 mKIAA0 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRG ::::::::::::::::::::::::::::::::::::::::::::::::::: :::: ::: gi|739 SLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVDCLEQGSRG 870 880 890 900 910 920 280 290 300 310 mKIAA0 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL :::::::::::::::::::::::::::::::::: ::::::::::::: gi|739 SILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLSLGRQVAAKAIAAL 930 940 950 960 318 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 23:53:30 2009 done: Thu Mar 12 23:59:22 2009 Total Scan time: 810.830 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]