FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1536.ptfa, 703 aa vs ./tmplib.26680 library 1768314 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.8976+/-0.00745; mu= -7.2689+/- 0.491 mean_var=393.8130+/-94.435, 0's: 0 Z-trim: 28 B-trim: 0 in 0/36 Lambda= 0.0646 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00279 ( 1335 res) mpg01084 (1335) 289 42 0.00059 mKIAA4150 ( 1022 res) mfj20071 (1022) 248 38 0.007 mKIAA1074 ( 1043 res) mfj11296 (1043) 247 38 0.0076 >>mFLJ00279 ( 1335 res) mpg01084 (1335 aa) initn: 235 init1: 128 opt: 289 Z-score: 163.4 bits: 41.7 E(): 0.00059 Smith-Waterman score: 301; 25.170% identity (28.101% ungapped) in 441 aa overlap (134-538:217-647) 110 120 130 140 150 160 mKIAA1 KPGAQLYQFRYVNRQGRVCGQSPPFQFREPRPMDELVTLEEADGGSDILLVVPKATVLQN : :::.. : ... : : . .: mFLJ00 LQRNCAAYLRLRNWQWWRLFTKVKPLLNSIRHEDELLAKE-----AELTKVREKHLAAEN 190 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 QLDESQQERNDLMQLKLQLEDQV---TELRSRVQELEAALATARQEHSELTEQYKGLSRS .: : . ...:: ::::..:. ::: ....::.: :.. .:: :. .. .. . mFLJ00 RLTEMETMQSQLMAEKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHDLEARVEE 250 260 270 280 290 300 230 240 250 260 mKIAA1 HGE----LSEERDILSQQQGDHVARILELEDD------IQTMSDKVLMKEVELDRV--RD . : :. :. . ::. ... . :: :.. .. .. .. .:..: :.. .: mFLJ00 EEERCQYLQAEKKKM-QQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEDQIIMED 310 320 330 340 350 360 270 280 290 300 310 320 mKIAA1 TVKALTREQEKLLRQLKEFQAD---KEQSEAELQTVREENCCLNTELQEAKSRQEEQGAQ :..:.. : .. :: .. .:.. : ..... . :.:.: :.:.: . mFLJ00 QNCKLAKEKKLLEDRVAEFTTNLMEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQE 370 380 390 400 410 420 330 340 350 360 370 380 mKIAA1 VQRLKDKL----AHMKDTLGQAQQKVAELE-PLKEQLRGVQELAASSQQKAALLGEELAS ... . :: . ..: ... : ..:::. : .. . .: : ...:: . : . mFLJ00 LEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALKK 430 440 450 460 470 480 390 400 410 420 430 mKIAA1 AAGARDRTIAELHRSRLEVAEVNGRLAE-LSLHMKEEKCQWSKERTGLLQSMEAEKDKIL . :.::... :: ... :: . . :: . : :.: :... mFLJ00 IR-ELETQISELQED-LESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRS 490 500 510 520 530 440 450 460 470 480 490 mKIAA1 KLSAEILRLEKTVQEERTQSHVFKTELAREKDSSLV-----QLSESKRELTELRSALRVL : :. :.::...: ...: . . :.: :. : :: ..:: . :..: ..: mFLJ00 KREQEVSILKKTLEDE-AKTHEAQIQEMRQKHSQAVEELADQLEQTKRVKATLEKAKQTL 540 550 560 570 580 590 500 510 520 530 540 mKIAA1 QKEKEQLQTEKQELL------EYMRK-LEARLEKVADEKWTEDAATEDEEATAGLSCPAS ..:. .: .: . :: :. :: .::.:... . :..: .. : : mFLJ00 ENERGELANEVKALLQGKGDSEHKRKKVEAQLQEL-QVKFSEGERVRTELADKVTKLQVE 600 610 620 630 640 650 550 560 570 580 590 600 mKIAA1 LTDSEDESPEDMRLPSYGLCESGNTSSSPPGPREPSSLVVINQPAPIAPQFSGPGEASSS mFLJ00 LDSVTGLLSQSDSKSSKLTKDFSALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSF 660 670 680 690 700 710 >>mKIAA4150 ( 1022 res) mfj20071 (1022 aa) initn: 135 init1: 86 opt: 248 Z-score: 144.1 bits: 37.7 E(): 0.007 Smith-Waterman score: 257; 25.700% identity (27.978% ungapped) in 393 aa overlap (152-525:248-627) 130 140 150 160 170 180 mKIAA1 CGQSPPFQFREPRPMDELVTLEEADGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQ .:: :: ::. : ..:: . . . mKIAA4 EKEKKDYQQKLAKEQGSLREQLQVHIQTIGILVSEKAE-LQTALAHTQQAARQKAGESED 220 230 240 250 260 270 190 200 210 220 230 240 mKIAA1 LEDQVTELRSRVQELEAALATARQEHSELTEQYKGLSRSHGELSEERDILSQQQGDHVAR : ... :.:: ::: .:.: .. : : .: . .:..::: :. . . mKIAA4 LASRLQSSRQRVGELERTLST-------VSTQQKQADRYNKDLTKERDALKLELYKNSKS 280 290 300 310 320 250 260 270 280 290 mKIAA1 ILELEDDIQTMSDKVLMKEVELDRVRDTVKALTR--EQEKLLRQLKEFQADKEQSEAELQ .:... . . .:. . .: .. :. : . :. .:: : :.. .. .:: mKIAA4 NEDLRQQNSELEEKLRVLVAEKAAAQLGVEELQKKLEMSELLLQQFSSQSSAAGGNEQLQ 330 340 350 360 370 380 300 310 320 330 340 350 mKIAA1 TVREENCCLNT---ELQEA-KSRQEEQGAQVQRLKDKLAHMKDTLGQAQQKVAELEPLKE . :: :.: .:.:. :. : :. .. :: . : .. . : ..: :. :: mKIAA4 HAMEERAQLETHVSQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHTLKEEKE 390 400 410 420 430 440 360 370 380 390 400 mKIAA1 QL-RGVQELAAS-----SQQKAALLGEELASAAGARDRTIAELHRSRLEVAEVNGRLAEL . : :::: .: ::.. : :. . :... .:... . :. ...:.: . mKIAA4 HRERQVQELETSLAALRSQMEEPPPPEPPAGPSEAEEQLQGEVEQLHKELERLTGQL-RA 450 460 470 480 490 500 410 420 430 440 450 460 mKIAA1 SLHMKEEKCQWSKERTGLLQSMEAEKDKILKLSAEILRLEKTVQEERT-------QSHVF ... .: . ..:. : : .: : .. . . : .. ...: .:: :.. . mKIAA4 QVQDNESLSHLNREQEGRLLELEREAQRWSEQAEERKQILESMQSDRTTISRALSQNREL 510 520 530 540 550 560 470 480 490 500 510 520 mKIAA1 KTELAREKDSSLVQLSESKRELTELRSALRVLQKEKEQLQTEKQELLEYMRKLEARLEKV : .:: : ....:.:.. . :.: :::. :. :..: . :: : . .:. .: mKIAA4 KEQLA-ELQNGFVRLTNENMEIT---SALQSEQHVKKELARKLGELQERLGELKETVELK 570 580 590 600 610 620 530 540 550 560 570 580 mKIAA1 ADEKWTEDAATEDEEATAGLSCPASLTDSEDESPEDMRLPSYGLCESGNTSSSPPGPREP ..: mKIAA4 SQEAQGLQEQRDQCLSHLQQYAAAYQQHLAAYEQLTSEKEAIHKQLLLQTQLMDQLQHEE 630 640 650 660 670 680 >>mKIAA1074 ( 1043 res) mfj11296 (1043 aa) initn: 90 init1: 90 opt: 247 Z-score: 143.5 bits: 37.6 E(): 0.0076 Smith-Waterman score: 258; 22.917% identity (26.330% ungapped) in 432 aa overlap (129-521:370-784) 100 110 120 130 140 150 mKIAA1 ASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFREPRPMDELVTLEEADGGSDILLVVPKA : .: : .... .: . : : . : mKIAA1 KEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKN---DNLQRMVKL 340 350 360 370 380 390 160 170 180 190 200 210 mKIAA1 TVLQNQLDESQQERN----DLMQLKLQLEDQV---TELRSRVQELEAALATARQEHSELT ..:...::. .:... :. ... .: . . .:... ..:: :. ::.: .. mKIAA1 NMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVK 400 410 420 430 440 450 220 230 240 250 260 mKIAA1 EQYKGLSRSHGELSEERDILSQQQGDHVARILELEDDIQTMSDKVLMKEVELDRV-RDT- .. .. . ..: .. ..:::: . .. :: ... .:.. : . : .. :: mKIAA1 DK---MNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLS 460 470 480 490 500 510 270 280 290 300 310 320 mKIAA1 -VKALTREQEKLLR----QLKEFQADKEQSEAELQTVREENCCLNTELQEAKSRQEEQGA .. .: :.... ....:.. .:. : .: .. :: : .:..: .. : . mKIAA1 QTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDK 520 530 540 550 560 570 330 340 350 360 370 mKIAA1 QVQRLKDKLAHM---------KDTL---GQAQQKVAELEPLKEQLRGVQELAASSQQKAA . ..:.. . . .: . :. :.: :.:.: .. : . . mKIAA1 TIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVR 580 590 600 610 620 630 380 390 400 410 420 mKIAA1 LLGEELASAAGARDRTIAEL-----HRSRLE--VAEVNGRLAELSLHMKEEKCQWSKERT : .:::.. .. . : : .:: :: . ... .:..: ...: . : .: . mKIAA1 QLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQ-HREAV 640 650 660 670 680 690 430 440 450 460 470 480 mKIAA1 GLLQSMEAEKDKILKLSAEILRLEKTVQEERTQSHVFKTELAREKDSSLVQLSESKRE-- ..:: :.. :: : ..: :.... . .. .:.: :.::: .: mKIAA1 HHAEKME---DHLQKLELEKSKFEITIKKQSEEIDQLQENLSR------VNLSEEDKEKL 700 710 720 730 740 490 500 510 520 530 mKIAA1 --LTELRSALR--VLQKEKEQLQTEKQELLEYMRKLEARLEKVADEKWTEDAATEDEEAT ::::. .:. : :..:.. :: ::.. ..: ..::: mKIAA1 QKLTELKESLECTVDQEQKRSSALEK-ELMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEK 750 760 770 780 790 800 540 550 560 570 580 590 mKIAA1 AGLSCPASLTDSEDESPEDMRLPSYGLCESGNTSSSPPGPREPSSLVVINQPAPIAPQFS mKIAA1 NMVEHSQAQQYAREVEERARQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQME 810 820 830 840 850 860 703 residues in 1 query sequences 1768314 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:47:33 2006 done: Mon Mar 27 10:47:34 2006 Scan time: 0.890 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]