FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1726.ptfa, 613 aa vs ./tmplib.26680 library 1768404 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.9512+/-0.00614; mu= 1.8753+/- 0.407 mean_var=208.3552+/-50.083, 0's: 0 Z-trim: 6 B-trim: 161 in 1/35 Lambda= 0.0889 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0323 ( 718 res) mbg03489 ( 718) 514 79 2.2e-15 mKIAA0615 ( 919 res) mid10054 ( 919) 459 72 3.5e-13 mKIAA1305 ( 1161 res) mbp09087 (1161) 395 63 1.2e-10 >>mKIAA0323 ( 718 res) mbg03489 (718 aa) initn: 492 init1: 386 opt: 514 Z-score: 368.6 bits: 78.5 E(): 2.2e-15 Smith-Waterman score: 514; 47.953% identity (50.617% ungapped) in 171 aa overlap (2-172:504-665) 10 20 30 mKIAA1 KLAVDWFLERGHKDITVFVPAWRKEQSRPDA :::..: .:::.::::::: :: . :. mKIAA0 QPDLRHIVIDGSNVAMVHGLQHYFSSRGIALAVQYFWDRGHRDITVFVPQWRFSK---DS 480 490 500 510 520 530 40 50 60 70 80 90 mKIAA1 LITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLAN . ....:.:: . ..: .:::: ..:.:. :::::.:::: :.::::::::..::::. mKIAA0 KVRESHFLQKLYSLSLLSLTPSRVMDGKRISSYDDRFMVKLAEETDGIIVSNDQFRDLAE 540 550 560 570 580 590 100 110 120 130 140 150 mKIAA1 EKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKK :. .: .: :::: ..::.. :: :::::::.::.::.:: :::. .:: .. mKIAA0 ESDKWMAIIRERLLPFTFVGNLFMVPDDPLGRNGPTLDEFL-KKPV----RKQGSSKTQQ 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 CTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTTNEGGLVKSNSVPCSTKADSTSD . : . . . ..:.. .:: mKIAA0 PSKG-STEQANQQQGKDADRSNGGIRKTRETERLRRQLLEVFWGQDHKVDFILQREPYCR 650 660 670 680 690 700 >>mKIAA0615 ( 919 res) mid10054 (919 aa) initn: 488 init1: 372 opt: 459 Z-score: 329.1 bits: 71.6 E(): 3.5e-13 Smith-Waterman score: 459; 48.611% identity (50.360% ungapped) in 144 aa overlap (2-145:668-806) 10 20 30 mKIAA1 KLAVDWFLERGHKDITVFVPAWRKEQSRPDA .::..: . :...:::::: :: .: : mKIAA0 RADLKHIVIDGSNVAITHGLKKFFSCRGIAIAVEYFWKLGNRNITVFVPQWR---TRRDP 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 LITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLAN ::.:..: .:.. :: .::.: : :.:.. .::::...:: .. ::::.:::.:.... mKIAA0 NITEQHFLTQLQELGILSLTPARMVFGERIASHDDRFLLHLADKTGGIIVTNDNFREFVT 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 EKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKK :. :...: .:::.:.::.: :: :::::::.:: :..::::. .. .: :: mKIAA0 ESVSWREIITKRLLQYTFVGDIFMVPDDPLGRNGPRLEEFLRKEAFL-RHM-QPLLNALP 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA1 CTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTTNEGGLVKSNSVPCSTKADSTSD mKIAA0 SVGTFDPGFRSPSTQVANNSHQPPPRIQTSSSPWLPQQSHFTALATLPSMQQNPPLPAQR 820 830 840 850 860 870 >>mKIAA1305 ( 1161 res) mbp09087 (1161 aa) initn: 405 init1: 151 opt: 395 Z-score: 283.5 bits: 63.5 E(): 1.2e-10 Smith-Waterman score: 395; 45.185% identity (47.287% ungapped) in 135 aa overlap (2-136:88-216) 10 20 30 mKIAA1 KLAVDWFLERGHKDITVFVPAWRKEQSRPDA .::..: .:::..::::::.:. ...: mKIAA1 NPGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREITVFVPTWQLKKNRR-- 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 LITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLAN . ....: ::.. :.: .:::. .:.... :: ::.:::: :.::.::.:.. . : : mKIAA1 -VRESHFLTKLHRLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGVIVTNEQIHILMN 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA1 EKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKK .. : .. .::: ..:... :: ::::::: ::.:..:: ::: mKIAA1 NSK--KLMVKDRLLPFTFAGSLFMVPDDPLGRDGPTLEEFL-KKPNRLDMDIGNFLKVWK 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA1 CTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTTNEGGLVKSNSVPCSTKADSTSD mKIAA1 TLPPSSASISELSDDADAEPLEDPQDVEEAGKEEGSLEEEPGIPKPDEEDEQDTNPVSVF 240 250 260 270 280 290 613 residues in 1 query sequences 1768404 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:51:44 2006 done: Mon Mar 27 10:51:45 2006 Scan time: 0.780 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]