FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0403.ptfa, 423 aa vs ./tmplib.26680 library 1768594 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.1839+/-0.00569; mu= 3.1488+/- 0.380 mean_var=163.4247+/-38.687, 0's: 0 Z-trim: 9 B-trim: 0 in 0/36 Lambda= 0.1003 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0902 ( 1058 res) mbg09814 (1058) 596 98 2.7e-21 mKIAA1686 ( 1205 res) mbg21605 (1205) 203 41 0.0004 mKIAA0799 ( 1450 res) mbg04147 (1450) 176 38 0.0068 >>mKIAA0902 ( 1058 res) mbg09814 (1058 aa) initn: 902 init1: 505 opt: 596 Z-score: 474.6 bits: 98.2 E(): 2.7e-21 Smith-Waterman score: 925; 35.776% identity (41.500% ungapped) in 464 aa overlap (15-416:585-1046) 10 20 30 40 mKIAA0 HSPVHATLAGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLS :.:::::::::..::.:::.:::. ...: mKIAA0 VPETTLYHTFQQSSLQHKSKKKNKGAISGKSKRRISCKDLGRGDCEGWLWKKKDAKSYFS 560 570 580 590 600 610 50 60 70 80 90 100 mKIAA0 NKWKKFWVVLKGSSLYWYSNQMAEKADGFVNLSDFTVERASECKKKNAFKINHPQIKAFY .::::.: ::: .::::: :. :::.::..: .: ..:::::.:: ::: ::.::.:: mKIAA0 QKWKKYWFVLKDASLYWYINEEDEKAEGFISLPEFKIDRASECRKKYAFKACHPKIKSFY 620 630 640 650 660 670 110 120 130 140 150 mKIAA0 FAAENLQEMNVWLNKLGF---AVTHQESITKDEECYSESEQEDPEVAV----EAPPPPYA ::::.:..:: :::.... . ...: : .... .:::..:. .. ..::::: mKIAA0 FAAEHLDDMNRWLNRINMLTAGYAERERIKQEQDYWSESDKEEADTPSTPKQDSPPPPYD 680 690 700 710 720 730 160 170 180 190 200 210 mKIAA0 S-------TTSSPVVRVDAAQWASSSSPKRRETSCSFSSLENTVKAPSQFSSSGSKERQS . . .:: :.. .. .:. . . . . : . . .: : . ...:. :.: mKIAA0 TYPRPPSMSCASPYVEAKHSRLSSTETSQSQSSHEEFRQEVTGSSAVSPIRKTASQ-RRS 740 750 760 770 780 790 220 230 240 250 260 mKIAA0 WHNIVNSSPATEDA-----GLPLTFAEQVHTLAFSEASNCQA--PENNC-ITSEGGLLNL :...... : : .. ::: . . :.: :. : ..: . .. : : mKIAA0 WQDLIET-PLTSSGLHYLQTLPLEDSVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPYPL 800 810 820 830 840 850 270 280 mKIAA0 LSSDDTSSLNNN-----------------------------KDHLTVPD----------R :. . ::.: .: . :. . mKIAA0 AESERMQVLNGNGGKPRSFTLPRDSGFNHCCLNTPVSACDPQDDIQPPEVEEEEEEEEEE 860 870 880 890 900 910 290 300 310 320 330 340 mKIAA0 AAGSRMADREEIKSSE-DDEMEKLYKSLEQASLSPLGDRRPSTKKELRKSFVKRCKNPSI ::: .....: . . : .. ::..::.:::::::..: ::: : . ::.:::..: . mKIAA0 AAGENVGEKNENREEKLGDSLQDLYRALEEASLSPLGEHRISTKMEYKLSFIKRCNDPVM 920 930 940 950 960 970 350 360 370 380 390 400 mKIAA0 NEKLHKIRTLNSTLKCKEHDLAMINQLLDDPKLTARKYREWKVMNTLLIQDIYQQQAPQD :::::..: :.:::: .: ..:.:...::.: ::......:: : :. :: :. . .: mKIAA0 NEKLHRLRILKSTLKAREGEVAIIDKVLDNPDLTSKEFQQWKQMYLDLFLDICQSTTSND 980 990 1000 1010 1020 1030 410 420 mKIAA0 PEVTPQEVMNPTSSDCVENSL : .:: ::: mKIAA0 PLSISSEVDVLTSSLTHTHSYIETHV 1040 1050 >>mKIAA1686 ( 1205 res) mbg21605 (1205 aa) initn: 185 init1: 102 opt: 203 Z-score: 166.5 bits: 41.3 E(): 0.0004 Smith-Waterman score: 203; 30.159% identity (32.479% ungapped) in 126 aa overlap (13-132:91-213) 10 20 30 40 mKIAA0 HSPVHATLAGFFNMSRRRISCKDLGHADC--QGWLYKKKEKG :...: : : .: .:::::. : mKIAA1 EASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTG 70 80 90 100 110 120 50 60 70 80 90 mKIAA0 TFLSNKWKKFWVVLKGSSLYWYSNQMAEKADGFVNLSDFTVERAS---ECKKKNAFKINH : ::: : ::. :..: .. : : . : .: . . . ..: ::: : mKIAA1 MKL---WKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTAEDHINRKYAFKAAH 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 PQIKAFYFAAENLQEMNVWLNK-LGFAVTHQESITKDEECYSESEQEDPEVAVEAPPPPY :.....:: ... .::..:.. : :... : . . mKIAA1 PNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITTDSASTKETNNIP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 ASTTSSPVVRVDAAQWASSSSPKRRETSCSFSSLENTVKAPSQFSSSGSKERQSWHNIVN mKIAA1 NHRVLIRPEVQNHQKNKEISKIEEKRALEAERYGFQKDGQDRPLTKINSVKLNSLLSEYE 240 250 260 270 280 290 >>mKIAA0799 ( 1450 res) mbg04147 (1450 aa) initn: 171 init1: 89 opt: 176 Z-score: 144.3 bits: 37.5 E(): 0.0068 Smith-Waterman score: 176; 31.967% identity (34.513% ungapped) in 122 aa overlap (30-149:608-722) 10 20 30 40 50 mKIAA0 HSPVHATLAGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLSNK-WKKFWVVLKGSS ::::.:: .. :: . ::: : ::. :. mKIAA0 GGLMNSWKRRWCVLKDETFLWFRSKQEALKQGWLHKKGGGSSTLSRRNWKKRWFVLRQSK 580 590 600 610 620 630 60 70 80 90 100 110 mKIAA0 LYWYSNQMAEKADGFVNLSDFTVERASECKKKNAFKINHPQIKAFYFAAENLQEMNVWLN :... :. :: : :.. . : .. .:.:.. : . ..:.. ::. .. . : mKIAA0 LMYFENDSEEKLKGTVEVRT-AKEIIDNTSKENGIDIILAD-RTFHLIAESPEDASQW-- 640 650 660 670 680 690 120 130 140 150 160 170 mKIAA0 KLGFAVTHQESITKDEECYS-ESEQEDPEVAVEAPPPPYASTTSSPVVRVDAAQWASSSS :.: : . :.: ..:: .:. :: mKIAA0 ---FSVLSQVHSSTDQEIREMHDEQANPQNAVGTLDVGLIDSVCASDSPDRPNSFVIITA 700 710 720 730 740 750 180 190 200 210 220 230 mKIAA0 PKRRETSCSFSSLENTVKAPSQFSSSGSKERQSWHNIVNSSPATEDAGLPLTFAEQVHTL mKIAA0 NRVLHCNADTPEEMHHWITLLQRSKGDTRVEGQEFIVRGWLHKEVKNSPKMSSLKLKKRW 760 770 780 790 800 810 423 residues in 1 query sequences 1768594 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:19:58 2006 done: Mon Mar 27 10:19:59 2006 Scan time: 0.660 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]