# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbp10042.fasta.nr -Q ../query/mKIAA1154.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1154, 488 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914523 sequences Expectation_n fit: rho(ln(x))= 5.7928+/-0.000194; mu= 8.7661+/- 0.011 mean_var=101.7037+/-19.335, 0's: 35 Z-trim: 56 B-trim: 139 in 2/65 Lambda= 0.127176 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|71153322|sp|Q5DU00.2|DCDC2_MOUSE RecName: Full= ( 475) 3094 578.2 1.6e-162 gi|56205629|emb|CAI24561.1| doublecortin domain co ( 475) 3079 575.4 1.1e-161 gi|149031521|gb|EDL86488.1| doublecortin domain co ( 475) 2956 552.9 6.9e-155 gi|109069771|ref|XP_001100219.1| PREDICTED: double ( 476) 2585 484.8 2.1e-134 gi|147744557|sp|Q9UHG0.2|DCDC2_HUMAN RecName: Full ( 476) 2583 484.4 2.8e-134 gi|29791794|gb|AAH50704.1| DCDC2 protein [Homo sap ( 476) 2569 481.8 1.6e-133 gi|149731826|ref|XP_001495221.1| PREDICTED: simila ( 476) 2554 479.1 1.1e-132 gi|194039722|ref|XP_001928023.1| PREDICTED: simila ( 474) 2532 475.1 1.8e-131 gi|74004140|ref|XP_853515.1| PREDICTED: similar to ( 505) 2462 462.2 1.4e-127 gi|114605671|ref|XP_527599.2| PREDICTED: doublecor ( 469) 2340 439.8 7.2e-121 gi|148700516|gb|EDL32463.1| doublecortin domain co ( 371) 2320 436.1 7.7e-120 gi|126321944|ref|XP_001366751.1| PREDICTED: simila ( 468) 2239 421.3 2.7e-115 gi|149031520|gb|EDL86487.1| doublecortin domain co ( 371) 2214 416.6 5.5e-114 gi|149490133|ref|XP_001510300.1| PREDICTED: simila ( 479) 2063 389.0 1.5e-105 gi|28175451|gb|AAH45136.1| Doublecortin domain con ( 368) 2006 378.5 1.7e-102 gi|224045702|ref|XP_002189291.1| PREDICTED: simila ( 446) 1589 302.0 2.1e-79 gi|28302179|gb|AAH46665.1| MGC52970 protein [Xenop ( 486) 1463 278.9 2e-72 gi|47215221|emb|CAF96719.1| unnamed protein produc ( 223) 829 162.3 1.2e-37 gi|55665487|emb|CAH71788.1| doublecortin domain co ( 229) 785 154.2 3.3e-35 gi|6453454|emb|CAB61371.1| hypothetical protein [H ( 236) 772 151.9 1.7e-34 gi|13537216|dbj|BAB40784.1| HrDoublecortin [Halocy ( 803) 709 140.8 1.3e-30 gi|198431881|ref|XP_002130300.1| PREDICTED: simila ( 887) 705 140.1 2.3e-30 gi|148700515|gb|EDL32462.1| doublecortin domain co ( 108) 691 136.7 2.9e-30 gi|189531015|ref|XP_689955.3| PREDICTED: similar t ( 375) 697 138.3 3.4e-30 gi|220678349|emb|CAX13134.1| novel protein similar ( 447) 694 137.8 5.7e-30 gi|79151921|gb|AAI08063.1| Zgc:123267 [Danio rerio ( 448) 693 137.6 6.5e-30 gi|210103823|gb|EEA51854.1| hypothetical protein B ( 408) 666 132.6 1.9e-28 gi|149031519|gb|EDL86486.1| doublecortin domain co ( 108) 615 122.8 4.6e-26 gi|6684527|gb|AAF23610.1|AF181720_1 RU2S [Homo sap ( 97) 596 119.2 4.8e-25 gi|119575845|gb|EAW55441.1| hCG36730, isoform CRA_ ( 98) 596 119.2 4.8e-25 gi|159164249|pdb|2DNF|A Chain A, Solution Structur ( 108) 583 116.9 2.7e-24 gi|194207759|ref|XP_001917349.1| PREDICTED: simila ( 349) 575 115.9 1.8e-23 gi|113412792|ref|XP_001127882.1| PREDICTED: hypoth ( 531) 568 114.8 5.9e-23 gi|169163596|ref|XP_001715955.1| PREDICTED: hypoth ( 652) 568 114.8 6.8e-23 gi|169164176|ref|XP_001719843.1| PREDICTED: hypoth ( 735) 568 114.9 7.5e-23 gi|109479230|ref|XP_001075564.1| PREDICTED: simila ( 362) 563 113.7 8.4e-23 gi|109478096|ref|XP_576011.2| PREDICTED: similar t ( 467) 563 113.8 1e-22 gi|114575937|ref|XP_525678.2| PREDICTED: hypotheti ( 760) 557 112.9 3.1e-22 gi|158706437|sp|A2VCK2.1|DCD2B_HUMAN RecName: Full ( 349) 536 108.7 2.5e-21 gi|47230039|emb|CAG10453.1| unnamed protein produc ( 226) 529 107.3 4.5e-21 gi|210129768|gb|EEA77441.1| hypothetical protein B ( 209) 525 106.5 7e-21 gi|114555357|ref|XP_513279.2| PREDICTED: similar t ( 346) 526 106.9 8.9e-21 gi|55959678|emb|CAI17105.1| doublecortin domain co ( 87) 516 104.5 1.2e-20 gi|156225438|gb|EDO46255.1| predicted protein [Nem ( 404) 521 106.0 1.9e-20 gi|194664363|ref|XP_592329.4| PREDICTED: similar t ( 341) 498 101.7 3.1e-19 gi|220678350|emb|CAX13135.1| novel protein similar ( 153) 471 96.5 5.3e-18 gi|224043293|ref|XP_002193989.1| PREDICTED: simila ( 879) 382 80.8 1.6e-12 gi|126327453|ref|XP_001367866.1| PREDICTED: simila ( 740) 380 80.4 1.8e-12 gi|197245552|gb|AAI68500.1| Unknown (protein for M ( 782) 380 80.4 1.9e-12 gi|221040592|dbj|BAH11973.1| unnamed protein produ ( 619) 376 79.6 2.6e-12 >>gi|71153322|sp|Q5DU00.2|DCDC2_MOUSE RecName: Full=Doub (475 aa) initn: 3094 init1: 3094 opt: 3094 Z-score: 3073.9 bits: 578.2 E(): 1.6e-162 Smith-Waterman score: 3094; 100.000% identity (100.000% similar) in 475 aa overlap (14-488:1-475) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF ::::::::::::::::::::::::::::::::::::::::::::::: gi|711 MNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKP 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 TKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVD 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 EEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 EEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGT 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA1 DEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 DEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEA 410 420 430 440 450 460 mKIAA1 NKASSAVA :::::::: gi|711 NKASSAVA 470 >>gi|56205629|emb|CAI24561.1| doublecortin domain contai (475 aa) initn: 3079 init1: 3079 opt: 3079 Z-score: 3059.0 bits: 575.4 E(): 1.1e-161 Smith-Waterman score: 3079; 99.579% identity (99.789% similar) in 475 aa overlap (14-488:1-475) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF ::::::::::::::::::::::::::::::::::::::::::::::: gi|562 MNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKP 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 TKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVD 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 EEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGT ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|562 EEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKASPSRVNGGT 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA1 DEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEA :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|562 DEENGEELDQVAEELQSTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEA 410 420 430 440 450 460 mKIAA1 NKASSAVA :::::::: gi|562 NKASSAVA 470 >>gi|149031521|gb|EDL86488.1| doublecortin domain contai (475 aa) initn: 2956 init1: 2956 opt: 2956 Z-score: 2937.0 bits: 552.9 E(): 6.9e-155 Smith-Waterman score: 2956; 95.158% identity (98.526% similar) in 475 aa overlap (14-488:1-475) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF ::::: :::::::::::::::::::::::::::::::::::::::.: gi|149 MNGPSPRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDIF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|149 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGQEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD ::::::::::::::::.:::::::::.:::::::::::::::::::::::::.::::::: gi|149 RPMEAVNTEVKPVIHSKINVSARFRKALHEPCTIFLIANGDLISPASRLLIPRKALNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKP 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVD ::::::::::.:::::::: :::::::::::::::::::::::::::::::::::::::: gi|149 TKVKQSVKSKNSHQAIPDNDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVD 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 EEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGT :::::::::::::::.::::::::.:::.:::.: . :.::::::.::::.::::::::: gi|149 EEEDGEKTSKDANQKDDFSAMNGEAEDRAGSKVADAPEEEEGIPDQGEKKASPSRVNGGT 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA1 DEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEA :::::::::::.:::::: :::::::::::.::::::::::::::::::::::::: ::. gi|149 DEENGEELDQVTEELQPTVDEKGKAEGDNSAQDEAGLDAQRPPRPEVTVTSPQENEGNES 410 420 430 440 450 460 mKIAA1 NKASSAVA :::::::: gi|149 NKASSAVA 470 >>gi|109069771|ref|XP_001100219.1| PREDICTED: doublecort (476 aa) initn: 1775 init1: 1723 opt: 2585 Z-score: 2569.2 bits: 484.8 E(): 2.1e-134 Smith-Waterman score: 2585; 83.193% identity (93.697% similar) in 476 aa overlap (14-488:1-476) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF :.: :.::::::::::::::::::::::::::::::::::::::::: gi|109 MSGSSARSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK :::::::::::::::::::::::::::::::::.::::::::: :::::::::::::::: gi|109 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD ::::.::::::::::::::::::::: :.::::::::::::::.::::::::.::::::: gi|109 RPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKALNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::.:.:::::::::::::::::::.::::::.::: gi|109 HVLQMVTEKITLRSGAVHRLYTLEGKLIENGAELENGQFYVAVGRDKFKKLPYSELIFDK 170 180 190 200 210 220 250 260 270 280 290 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEK :.::::.:::::::::.::::::::::: ::::::::::::::::: :::::. : :::: gi|109 STMRRPFGQKASSLPPIVGSRKSKGSGNDRQSKSTIGSSDNSSPQPPKRKGKREDVNSEK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 PTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV ::::.:: :.:...::.. ::::::::::::::::::::::::::::::::::::::: gi|109 LMKVKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 DEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGG ::::::::..:::.::::::.:::. :..:: .:. . :: . : :.:....:.::::: gi|109 DEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVKEILGHSEEQAGPARVNGG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 TDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENE :::::::::::: .::: . ::. :..: .:::::: :: :::::::: .:::.:::.:. gi|109 TDEENGEELDQVNNELQLALDEERKSQGAGSGQDEADLDPQRPPRPEVRITSPEENENNK 410 420 430 440 450 460 480 mKIAA1 ANKASSAVA :: .::: gi|109 QNKDYAAVA 470 >>gi|147744557|sp|Q9UHG0.2|DCDC2_HUMAN RecName: Full=Dou (476 aa) initn: 1770 init1: 1721 opt: 2583 Z-score: 2567.2 bits: 484.4 E(): 2.8e-134 Smith-Waterman score: 2583; 82.983% identity (94.118% similar) in 476 aa overlap (14-488:1-476) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF :.: :.::::::::::::::::::::::.:::::::::::::::.:: gi|147 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK :::::::::::::::::::::::::::::::::.::::::::: :::::::::::::::: gi|147 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD ::::.::::::::::::::::::::: :.::::::::::::::.::::::::.:.::::: gi|147 RPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|147 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSELLFDK 170 180 190 200 210 220 250 260 270 280 290 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEK :.::::.:::::::::.::::::::::: :.::::.::::::::::::::::: : :::: gi|147 STMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 PTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV ::.::.:: :.:...::.. ::::::::::::::::::::::::::::::::::::::: gi|147 LTKLKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 DEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGG ::::::::..:::.::::::.:::. :..:: .:. . :: : : ::.:... :.::::: gi|147 DEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 TDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENE :::::::::.:: .::: . :.. :..: .:::::: .: :::::::: .:::.:::.:. gi|147 TDEENGEELQQVNNELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQ 410 420 430 440 450 460 480 mKIAA1 ANKASSAVA :: .::: gi|147 QNKDYAAVA 470 >>gi|29791794|gb|AAH50704.1| DCDC2 protein [Homo sapiens (476 aa) initn: 1756 init1: 1707 opt: 2569 Z-score: 2553.3 bits: 481.8 E(): 1.6e-133 Smith-Waterman score: 2569; 82.563% identity (93.908% similar) in 476 aa overlap (14-488:1-476) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF :.: :.::::::::::::::::::::::.:::::::::::::::.:: gi|297 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK ::::::::::::::::::::::: :::::::::.::::::::: :::::::::::::::: gi|297 LKEVTGGVQAPFGAVRNIYTPRTDHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD ::::.::::::::::::::::::::: :.::::::::::::::.::::::::.:.::::: gi|297 RPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::::: gi|297 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDK 170 180 190 200 210 220 250 260 270 280 290 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEK :.::::.:::::::::.::::::::::: :.::::.::::::::::::::::: : :::: gi|297 STMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 PTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV ::.::.:: :.:...::.. ::::::::::::::::::::::::::::::::::::::: gi|297 LTKLKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 DEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGG ::::::::..:::.::::::.:::. :..:: .:. . :: : : ::.:... :.::::: gi|297 DEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 TDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENE :::::::::.:: .::: . :.. :..: .:::::: .: :::::::: .:::.:::.:. gi|297 TDEENGEELQQVNNELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQ 410 420 430 440 450 460 480 mKIAA1 ANKASSAVA :: .::: gi|297 QNKDYAAVA 470 >>gi|149731826|ref|XP_001495221.1| PREDICTED: similar to (476 aa) initn: 1728 init1: 1703 opt: 2554 Z-score: 2538.4 bits: 479.1 E(): 1.1e-132 Smith-Waterman score: 2554; 81.933% identity (93.067% similar) in 476 aa overlap (14-488:1-476) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF :.: :.::::::::::::::::::::::::::::::::::::::::: gi|149 MSGTSARSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK ::::::::::::::::::::::::::::::.::.::::::::: :::::::::::::::: gi|149 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLEQIKSGGNYVAGGQEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD ::::.::..::::::::::::::::: :.:::::::::::::.:::::::::.::::::: gi|149 RPMEVVNSQVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLVSPASRLLIPRKALNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK .::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::::: gi|149 RVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDK 170 180 190 200 210 220 250 260 270 280 290 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDS-NSEK :.::: ::::.:::::.::::::::::: ::::::.:::::::::: :::::::. :::: gi|149 STMRRSYGQKTSSLPPIVGSRKSKGSGNDRQSKSTVGSSDNSSPQPAKRKGKKDDVNSEK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 PTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV ::: ::.:: : : : .:.. ::::::: ::::::::::::::::::::.::::::::.: gi|149 PTKEKQNVKLKDSPQPVPNSDEGIFKAGEERSETRGAAEVQEDEDTQVEIPVDQRPAEMV 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 DEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGG :::::::: .:::.::::::..:::.:..::..:. . :: : : : ::....:.::::: gi|149 DEEEDGEKENKDAEQKEDFSGVNGEVEEEGGGEASDAPEQVEEILDLGEEQAGPARVNGG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 TDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENE :::::::::::: .::: . ::. :..: ..::::. :: : :::::: .::::::..:: gi|149 TDEENGEELDQVNNELQEAVDEEIKSQGAGDGQDEVDLDPQGPPRPEVKITSPQENDNNE 410 420 430 440 450 460 480 mKIAA1 ANKASSAVA :: ..:: gi|149 QNKDYAVVA 470 >>gi|194039722|ref|XP_001928023.1| PREDICTED: similar to (474 aa) initn: 1759 init1: 1712 opt: 2532 Z-score: 2516.6 bits: 475.1 E(): 1.8e-131 Smith-Waterman score: 2532; 81.489% identity (92.766% similar) in 470 aa overlap (14-482:1-470) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF :.: :.::::::::::::::::::::::::::::::::::::::::: gi|194 MSGTSARSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK ::::::::::::::::::::::::::::::::.:::::::::: :::::::::::::.:: gi|194 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQLESGGNYVAGGQEAFKKLNYLDIGEMKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD :::.::::::::::::.::::::::: : ::::::::::::::.::::::::.::::::: gi|194 RPMDAVNTEVKPVIHSKINVSARFRKPLLEPCTIFLIANGDLINPASRLLIPRKALNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::::: gi|194 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDK 170 180 190 200 210 220 250 260 270 280 290 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEK :.::: ::::::::::.::::::::::: ::::::.:::::::::: :::::: : :::: gi|194 STMRRSYGQKASSLPPIVGSRKSKGSGNDRQSKSTVGSSDNSSPQPPKRKGKKEDVNSEK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 PTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV ::. ::..: :.: ..:.. ::.:::: :::::::::.::::::::::.:::::::::: gi|194 PTRGKQNAKLKNSPPTVPNSDEGVFKAGEERSETRGAAQVQEDEDTQVEIPVDQRPAEIV 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 DEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGG :::::::: .::..::::: .:::..:..:: .:::: :: : ::: :....:.::.:: gi|194 DEEEDGEKENKDVEQKEDFLGMNGDVEEEGGREAAGTPEQVEETPDHKEEQAGPARVSGG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 TDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENE ::::::::::: .::: . ::. :..: .:::.:. : ::::.::: .:::.::...: gi|194 TDEENGEELDQPNNELQEAVDEEVKSQGAGSGQEEVDSDPQRPPKPEVKITSPEENDNSE 410 420 430 440 450 460 480 mKIAA1 ANKASSAVA :: gi|194 QNKDNLS 470 >>gi|74004140|ref|XP_853515.1| PREDICTED: similar to Dou (505 aa) initn: 1709 init1: 1683 opt: 2462 Z-score: 2446.8 bits: 462.2 E(): 1.4e-127 Smith-Waterman score: 2462; 81.169% identity (91.775% similar) in 462 aa overlap (13-473:44-505) 10 20 30 40 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFF .:. :.::::::::::::::::::::::: gi|740 DHAATSRCAREAASSSGSSPEKPAGRVLTGRMSCTSARSSHLSQPVVKSVLVYRNGDPFF 20 30 40 50 60 70 50 60 70 80 90 100 mKIAA1 AGRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAG ::::::::::::::::::::::::::::::::::::::::::::::::::..:::::::: gi|740 AGRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQLQSGGNYVAG 80 90 100 110 120 130 110 120 130 140 150 160 mKIAA1 GPEAFKKLNYLDIGEIKKRPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDL : :::::::::::::.::::::..:::::::.:::::::::::: :.::::::::::::: gi|740 GQEAFKKLNYLDIGEMKKRPMEVINTEVKPVMHSRINVSARFRKPLQEPCTIFLIANGDL 140 150 160 170 180 190 170 180 190 200 210 220 mKIAA1 ISPASRLLIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVA ::::::::::.:.::::::::::::::::::.:::::::::::: ::::::::::::::: gi|740 ISPASRLLIPRKTLNQWDHVLQMVTEKITLRTGAVHRLYTLEGKPVESGAELENGQFYVA 200 210 220 230 240 250 230 240 250 260 270 280 mKIAA1 VGRDKFKRLPYSELLFDKSAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNS :::::::.:::: ::::::.::: ::::::::::.::::::::::: ::::::.:::::. gi|740 VGRDKFKKLPYSGLLFDKSTMRRSYGQKASSLPPIVGSRKSKGSGNDRQSKSTVGSSDNT 260 270 280 290 300 310 290 300 310 320 330 340 mKIAA1 SPQPLKRKGKKDSNS-EKPTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQE :::: ::::.:. : ::: : ::.:: : : :. :.. ::.:::::::::::::::::: gi|740 SPQPPKRKGRKEEVSLEKPKKGKQNVKLKKSAQTSPNSDEGVFKAGAERSETRGAAEVQE 320 330 340 350 360 370 350 360 370 380 390 400 mKIAA1 DEDTQVEVPVDQRPAEIVDEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEE :::::::.::::::::::::::::::..:::.::::: .::::.:. : .:. .::. : gi|740 DEDTQVEIPVDQRPAEIVDEEEDGEKANKDAEQKEDFLGMNGEVEEGGDLEATEASEEVE 380 390 400 410 420 430 410 420 430 440 450 460 mKIAA1 GIPDHGEKKSSPSRVNGGTDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQR .::: :. ..:.: :::::::::::::::. ::: . :: :..: ..::.:: :: :: gi|740 EVPDHREEPAGPTRGNGGTDEENGEELDQVTTELQEAVDEDVKSQGAGTGQNEADLDHQR 440 450 460 470 480 490 470 480 mKIAA1 PPRPEVTVTSPQENEENEANKASSAVA :::::: .:::: gi|740 PPRPEVKITSPQ 500 >>gi|114605671|ref|XP_527599.2| PREDICTED: doublecortin (469 aa) initn: 1895 init1: 1721 opt: 2340 Z-score: 2326.3 bits: 439.8 E(): 7.2e-121 Smith-Waterman score: 2340; 77.101% identity (89.916% similar) in 476 aa overlap (14-488:1-469) 10 20 30 40 50 60 mKIAA1 PVECLRARRPAEKMNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVF :.: :.::::::::::::::::::::::.:::::::::::::::.:: gi|114 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVF 10 20 30 40 70 80 90 100 110 120 mKIAA1 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKK :::::::::::::::::::::::::::::::::.::::::::: :::::::::::::::: gi|114 LKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWD ::::.::::::::::::::::::::: :.::::::::::::::.::::::::.:.::::: gi|114 RPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDK :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|114 HVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSELLFDK 170 180 190 200 210 220 250 260 270 280 290 mKIAA1 SAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEK :.::::.:::::::::.::::::::::: :.::::.::::::::::::::::: : :::: gi|114 STMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 PTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV ::.::.:: :.:...::.. ::::::::::::::::::::::::::::::::::::::: gi|114 LTKLKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIV 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 DEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGG ::::::::..:::.::::::.:::. :..:: .:. . :. : .. .... ... : gi|114 DEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATXXPEKVETKKEYQDQED--KEICG- 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 TDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENE :: . .. :.. .. .. . : . : .: :::::::: .:::.:::.:. gi|114 ---ENKRTEKVISGEISLFLACSSMSD-PGVGYSSADVDPQRPPRPEVKITSPEENENNQ 410 420 430 440 450 460 480 mKIAA1 ANKASSAVA :: .::: gi|114 QNKDYAAVA 488 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 23:35:21 2009 done: Thu Mar 12 23:42:18 2009 Total Scan time: 937.770 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]