FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0865.ptfa, 1183 aa vs ./tmplib.26680 library 1767834 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 13.6924+/-0.0106; mu= -23.3246+/- 0.696 mean_var=695.9924+/-167.972, 0's: 0 Z-trim: 20 B-trim: 0 in 0/36 Lambda= 0.0486 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1486 ( 492 res) mbg14657 ( 492) 512 52 3.8e-07 mKIAA4211 ( 314 res) mfj31105 ( 314) 329 39 0.002 mFLJ00293 ( 1022 res) msh04332 (1022) 324 39 0.0057 >>mKIAA1486 ( 492 res) mbg14657 (492 aa) initn: 482 init1: 362 opt: 512 Z-score: 220.7 bits: 51.6 E(): 3.8e-07 Smith-Waterman score: 624; 31.646% identity (39.238% ungapped) in 553 aa overlap (668-1183:10-492) 640 650 660 670 680 690 mKIAA0 HQAPGTLSVQWARPDSVPQCTPQLPLHLPLPQGDYDDDAEPVYIEMVGNAARAGGSETDS : .: ... :::::::::: : .: : mKIAA1 DSSLSQVCSPAADPEEE-EPVYIEMVGNILRDFRKEED- 10 20 30 700 710 720 730 740 750 mKIAA0 PDQGESVYEEMKY-ILPEEG----CGLGMLTFLPASPPLFLETRKAIILEAAEGNCQPSK ::.:.::::::: :. . : : . . : : . . . : : :. mKIAA1 -DQSEAVYEEMKYPIFDDLGHDSKCDFDHHS---CSSQCATPTVPDLDFVKSSGPCTPKG 40 50 60 70 80 90 760 770 780 790 800 810 mKIAA0 DTCDIPPPFPNLLPHRPPLLVFPPTPVTRSPASDESPLTPLEVKKLPVLETNLKYPVQSE ::::::::::: ::::::::::.:: :: ::::::::::: :::::: :..: : mKIAA1 LLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLE-NVSYMKQPP 100 110 120 130 140 150 820 830 840 850 860 870 mKIAA0 GSSPLS-PQYSKAQKGDNDQLASPGFPVFNGPSRISPPATPPPPPGPPPAPCGPPPAPCG :. : : :...... .:: .. : : :: .::: mKIAA1 GACPSSLPSHGSSHA--KDQTGALG-----------------PAPGASILSSSPPP---- 160 170 180 880 890 900 910 920 930 mKIAA0 PPPAPCGPPPAPCGPPPA-PCGPPPAPCGAASASCGVAPAPCRPPTHFAFPPESVLVTAA :. .: : : . .: :. : . ..: . : :: ... ... mKIAA1 --PSTLYRTQSPHGYPKSHSTSPSPVSMGRS-----LTPLSLKRP-----PPYDAVHSGS 190 200 210 220 230 940 950 960 970 980 990 mKIAA0 KALTNSDLPRTQPKPSSAPVPGPCSSFVKAPYSPGKTARADLRKTSSTFSPPSPYSPPNS . ..:..:.: :.: : : ...:.: . ..:.. : : mKIAA1 LSRSSSSVPHTTPRPVSQD--G--AKMVNAAVNTYSAAQSGSR----------------S 240 250 260 270 1000 1010 1020 1030 1040 mKIAA0 RPLSSPLDELASLFNSGRSVLRRSAVGRRIRE-AEGFETNMNLSSRDEPSSSEMASETQD : .:::.::.:::.::::.::.:. ::: .: :: .... :. :.: . .. mKIAA1 RTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKSTEELKVRSH----STEPLPKLDS 280 290 300 310 320 330 1050 1060 1070 1080 1090 1100 mKIAA0 RNANNHGTQLSSSLSSDVTAEN-----GNPVTNGLAEDDGCSRLCLSGMGTS----SFQR .. ...: ::: : :.. : ::... . : :.: .: : . mKIAA1 KERGHYG---SSSSREPVKAQEWDGTPGPPVVTSRMGRCSVSPTLLAGNHSSEPKVSCKL 340 350 360 370 380 390 1110 1120 1130 1140 mKIAA0 NRESHTTQV----IHQLR----LSENESVALQ---------ELLDWRRKLCE---AREGW .: . :. : . :: :.... . .: :... .: ::. ::. mKIAA1 GRSASTSGVPPPSVTPLRQASDLQQSQVACMQWFHGDHTMLEMIEKKRCLCKEIKARQKT 400 410 420 430 440 450 1150 1160 1170 1180 mKIAA0 QEALQHPEPRAPPPPPCKKPTLLKKPEGGSCTRLPSQLWDSSM ...: . . : : :: . :: .. . .::... mKIAA1 EKGLCKQDS-MPILPSWKKNAGAKKYSPPPYSKQQTVFWDTAI 460 470 480 490 >>mKIAA4211 ( 314 res) mfj31105 (314 aa) initn: 255 init1: 175 opt: 329 Z-score: 153.7 bits: 38.5 E(): 0.002 Smith-Waterman score: 329; 31.797% identity (34.500% ungapped) in 217 aa overlap (1-214:64-266) 10 20 30 mKIAA0 VNLLAKSLYSRLFGFLINTVNCCLQNQDEY :. :::..: ..: .... .: :. : mKIAA4 DLLKALCYPRVKVGNEYVTKGQTVQQVYNAVGALAKAVYEKMFLWMVTRIN---QQLDTK 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA0 KSLQTLDIGILDIFGFEEFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAME . : . ::.::: ::: :. : .::::.:.::::....... .:. :: : .::. mKIAA4 QPRQYF-IGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWT 100 110 120 130 140 100 110 120 130 140 mKIAA0 TACSPGNQAGVLDFFFQKPSGFFSLLDEESQVIWSGEPNLPRKL--QGLLESSNTNAVYS . :. .... .:: :.::.:.:: . . . .. :: : : .:.: .. mKIAA4 FIDFGMDLAACIELI-EKPLGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNN----FQ 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA0 PVKDGNGNVAFKGQGAAFTVMHYAGRVMYEMGGAVE-NKDSLSQNLLFVMKTSENVVISH : ..:.. : :...:::: : :.. : .. ::: :..... ... : ... mKIAA4 KPKPAKGKAE-----AHFSLVHYAGTVDYNITGWLDKNKDPLNDTVVGLYQKSAMKTLAS 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 LFQSKLSQTGSLISSYPSFKFGGHKSTLLSKRTASSMVGVNKNYLELSKLLKKKGTSTFL ::.. : mKIAA4 LFSTYASAEADGGAKKGAKKKGSSFQTVSALFRVKYKFRLGKKVYSVSMYYICAI 260 270 280 290 300 310 >>mFLJ00293 ( 1022 res) msh04332 (1022 aa) initn: 389 init1: 184 opt: 324 Z-score: 145.7 bits: 38.7 E(): 0.0057 Smith-Waterman score: 412; 26.620% identity (31.421% ungapped) in 432 aa overlap (5-428:360-733) 10 20 30 mKIAA0 VNLLAKSLYSRLFGFLINTVNCCLQ--NQDEYKS ::..:.::: ...: .: .. :.: . mFLJ00 LLARTVASGGREVIEKSHTVAEASYARDACAKAMYQRLFEWVVNKINSIMEPRNRDPRCD 330 340 350 360 370 380 40 50 60 70 80 90 mKIAA0 LQTLDIGILDIFGFEEFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETA . ::.:::.::: : : :::.:.: :::... . .... ::: : .::.: .: mFLJ00 GKDTVIGVLDIYGFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGIAWQTI 390 400 410 420 430 440 100 110 120 130 140 150 mKIAA0 CSPGNQAGVLDFFFQKPSGFFSLLDEESQVIWSGEPNLPRKLQGLLESSNTNAVYSPVKD :.: .... : :....::: .. .: : : . :.. . . . .. mFLJ00 -EYFNNATIVELVEQPRRGILAVLDEACST--AG-PITDRIFLQTLDTHHRHHPHYSSRQ 450 460 470 480 490 500 160 170 180 190 200 210 mKIAA0 GNGNVAFKGQGAAFTVMHYAGRVMYEMGGAVE-NKDSLSQNLLFVMKTSENVVISHLFQS . : : . :::: : : . : .. :.::: :.. ..:. . mFLJ00 LCPTDKTMEFGRDFQIKHYAGDVTYSVEGFIDKNRDSLFQDF------------KRLLYN 510 520 530 540 550 220 230 240 250 260 270 mKIAA0 KLSQTGSLISSYPSFKFGGHKSTLLSKRTASSMVGVNKNYLELSKLLKKKGTSTFLQRLE ... : : . .:. : . : ..:: mFLJ00 SVDPT--LRAMWPD---GQQDITEVTKR-------------------------------- 560 570 280 290 300 310 320 330 mKIAA0 RGEPATAASQLTKSLADITAKLQRGSPHFILCIKPNTSQLPGVFDHFYVSAQLQYLGVLG : ::.. . .:.. .. .: : .. ::::: ... : .:. . :..:::.: mFLJ00 ---PLTAGTLFKNSMVALVENLASKEPFYVRCIKPNEDKVAGRLDEAHCRHQVEYLGLLE 580 590 600 610 620 630 340 350 360 370 380 390 mKIAA0 LVRLFRSGYPVRPSFEDFLSRYEPLASVLLGETKGQAAEERCRLVLQRCKLQG-WQIGVH ::. :.:. : . :: ::. . . .. .:.. ::: .: mFLJ00 NVRVRRAGFASRQPYPRFLLRYKMTCEYTWPNHLLGSDRDAVSALLEQHGLQGDVAFGHS 640 650 660 670 680 690 400 410 420 430 440 mKIAA0 KVFLKYWHVDQLSDLWLQLQRKI----VTCQKVIRGFLARQHLLQRMSIKQQEVTSIKSF :.:.. .. : : . : : . ::. :: ::: : mFLJ00 KLFIRSPRT--LVTLEQSRARLIPIIVLLLQKAWRGTLARWHCRRLRAIYTIMRWFRRHK 700 710 720 730 740 750 450 460 470 480 490 500 mKIAA0 LQSTEDMALKTYDALVIQNASDIAREHDRLRKEVHTAYHRNRQEEGTKRAEDQGGCRHVH mFLJ00 VRAHLIELQRRFQAARQPPLYGRDLVWPTPPAVLQPFQDTCRVLFSRWRARQLVKNIPPS 760 770 780 790 800 810 1183 residues in 1 query sequences 1767834 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:30:36 2006 done: Mon Mar 27 10:30:38 2006 Scan time: 1.150 Display time: 0.100 Function used was FASTA [version 3.4t11 Apr 17, 2002]