# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbp09156.fasta.nr -Q ../query/mKIAA0986.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0986, 921 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920768 sequences Expectation_n fit: rho(ln(x))= 5.4145+/-0.000184; mu= 12.4774+/- 0.010 mean_var=77.8014+/-15.248, 0's: 37 Z-trim: 43 B-trim: 0 in 0/66 Lambda= 0.145405 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26325584|dbj|BAC26546.1| unnamed protein produc ( 921) 6005 1269.9 0 gi|38566098|gb|AAH62130.1| Vps13a protein [Mus mus (1186) 5991 1267.0 0 gi|81888996|sp|Q5H8C4.1|VP13A_MOUSE RecName: Full= (3166) 5991 1267.3 0 gi|219275534|ref|NP_001094445.2| vacuolar protein (3167) 5796 1226.4 0 gi|42454404|emb|CAF25186.1| chorein 1D [Homo sapie (3069) 5540 1172.7 0 gi|114625101|ref|XP_001147843.1| PREDICTED: vacuol (3069) 5537 1172.1 0 gi|27697156|gb|AAH41852.1| VPS13A protein [Homo sa (1246) 5508 1165.7 0 gi|14289183|dbj|BAB59128.1| chorein [Homo sapiens] (3095) 5509 1166.2 0 gi|42406423|emb|CAE75581.1| chorein 2A [Homo sapie (3135) 5509 1166.2 0 gi|14388939|gb|AAK61861.1|AF337532_1 chorea-acanth (3174) 5509 1166.2 0 gi|71152975|sp|Q96RL7.2|VP13A_HUMAN RecName: Full= (3174) 5509 1166.2 0 gi|114625099|ref|XP_520084.2| PREDICTED: vacuolar (3094) 5506 1165.6 0 gi|114625097|ref|XP_001148476.1| PREDICTED: vacuol (3135) 5506 1165.6 0 gi|114625095|ref|XP_001148547.1| PREDICTED: vacuol (3174) 5506 1165.6 0 gi|73946751|ref|XP_533522.2| PREDICTED: similar to (3194) 5483 1160.7 0 gi|194669382|ref|XP_001787725.1| PREDICTED: simila (1560) 5404 1143.9 0 gi|10434665|dbj|BAB14337.1| unnamed protein produc ( 975) 5202 1101.4 0 gi|194224739|ref|XP_001916904.1| PREDICTED: vacuol (3126) 5194 1100.1 0 gi|119583002|gb|EAW62598.1| vacuolar protein sorti (2956) 5024 1064.4 0 gi|119583001|gb|EAW62597.1| vacuolar protein sorti (2995) 5024 1064.4 0 gi|119583003|gb|EAW62599.1| vacuolar protein sorti (2986) 4912 1040.9 0 gi|149635322|ref|XP_001511611.1| PREDICTED: simila (3012) 4821 1021.8 0 gi|224090857|ref|XP_002187102.1| PREDICTED: simila (3176) 4582 971.7 0 gi|74193594|dbj|BAE22761.1| unnamed protein produc ( 914) 4445 942.6 0 gi|169646798|ref|NP_001112365.1| vacuolar protein (3194) 4018 853.4 0 gi|169154014|emb|CAQ13645.1| vacuolar protein sort (2140) 3991 847.6 0 gi|190340261|gb|AAI63680.1| Vps13a protein [Danio (3216) 3991 847.8 0 gi|47226408|emb|CAG08424.1| unnamed protein produc (2972) 3834 814.8 0 gi|29747836|gb|AAH50055.1| Vps13a protein [Mus mus ( 690) 3721 790.6 0 gi|20137927|sp|Q9BGZ0.1|VP13A_MACFA RecName: Full= ( 619) 3522 748.9 1.7e-213 gi|148709596|gb|EDL41542.1| mCG13987, isoform CRA_ (1307) 3019 643.6 1.8e-181 gi|224062293|ref|XP_002194061.1| PREDICTED: vacuol (3733) 2959 631.3 2.5e-177 gi|74000345|ref|XP_864651.1| PREDICTED: similar to (3586) 2921 623.3 6e-175 gi|74000343|ref|XP_864640.1| PREDICTED: similar to (3599) 2921 623.3 6e-175 gi|74000341|ref|XP_851912.1| PREDICTED: similar to (3629) 2921 623.3 6e-175 gi|149062543|gb|EDM12966.1| rCG47395, isoform CRA_ (1110) 2905 619.6 2.4e-174 gi|118574242|sp|Q8BX70.2|VP13C_MOUSE RecName: Full (3748) 2904 619.8 7.3e-174 gi|114657348|ref|XP_510458.2| PREDICTED: vacuolar (3836) 2904 619.8 7.5e-174 gi|55726320|emb|CAH89931.1| hypothetical protein [ (1573) 2897 618.0 1e-173 gi|119598012|gb|EAW77606.1| vacuolar protein sorti (3585) 2901 619.1 1.1e-173 gi|119598009|gb|EAW77603.1| vacuolar protein sorti (3597) 2901 619.1 1.1e-173 gi|119598011|gb|EAW77605.1| vacuolar protein sorti (3628) 2901 619.1 1.1e-173 gi|119598005|gb|EAW77599.1| vacuolar protein sorti (3679) 2901 619.1 1.1e-173 gi|119598007|gb|EAW77601.1| vacuolar protein sorti (3710) 2901 619.1 1.1e-173 gi|119598008|gb|EAW77602.1| vacuolar protein sorti (3722) 2901 619.1 1.1e-173 gi|119598013|gb|EAW77607.1| vacuolar protein sorti (3753) 2901 619.1 1.1e-173 gi|109483673|ref|XP_343419.3| PREDICTED: similar t (3574) 2900 618.9 1.3e-173 gi|194206590|ref|XP_001918170.1| PREDICTED: simila (4053) 2899 618.8 1.6e-173 gi|149410857|ref|XP_001511058.1| PREDICTED: simila (3801) 2898 618.5 1.8e-173 gi|42454406|emb|CAF25187.1| VPS13C-1B protein [Hom (3585) 2895 617.9 2.6e-173 >>gi|26325584|dbj|BAC26546.1| unnamed protein product [M (921 aa) initn: 6005 init1: 6005 opt: 6005 Z-score: 6802.0 bits: 1269.9 E(): 0 Smith-Waterman score: 6005; 99.674% identity (100.000% similar) in 921 aa overlap (1-921:1-921) 10 20 30 40 50 60 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQDINFINFTCLTEMEKSDLDIAIHMTYNTGQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQDINFINFTCLTEMEKSDLDIAIHMTYNTGQT 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 VVAFHSPYWMVNKTNRMLQYKADGIHRKHPPNYTKPVLFSFQPNHFFNNNKVQLMVTDSE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|263 VVAFHSPYWMVNKTTRMLQYKADGIHRKHPPNYTKPVLFSFQPNHFFNNNKVQLMVTDSE 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 LSDQFSIDTVGSHGAIRCKGLKMEYQVGVTINLSSFNITRIVTFIPFYMIKNKSKYHISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LSDQFSIDTVGSHGAIRCKGLKMEYQVGVTINLSSFNITRIVTFIPFYMIKNKSKYHISV 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 AEEGSDKWLSLDLEQSIPFWPENASNILLIQVERSEDPPKRIYFNKQDNCILLRLNNELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AEEGSDKWLSLDLEQSIPFWPENASNILLIQVERSEDPPKRIYFNKQDNCILLRLNNELG 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA0 GIIAEVNLAEHSTVITFSDYHDGAATFLLINHTKSDPVQYNQSSLGEIEDSLPPGKAVYY ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|263 GIIAEVNLAEHSTVITFSDYHDGAATFLLINHTKSDPVQYNQSSLGKIEDSLPPGKAVYY 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA0 TWADPVGSRKLKWSCGQSYGEVTHKDDMMTPISVGKKTIYLVSFFEGLQRIILFTEDPRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TWADPVGSRKLKWSCGQSYGEVTHKDDMMTPISVGKKTIYLVSFFEGLQRIILFTEDPRV 310 320 330 340 350 360 370 380 390 400 410 420 mKIAA0 FKVTYESEKAELAELEVVLALQDVGISLVNNYTKQEVAYIGITSSDVVWEAKPKKKARWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FKVTYESEKAELAELEVVLALQDVGISLVNNYTKQEVAYIGITSSDVVWEAKPKKKARWK 370 380 390 400 410 420 430 440 450 460 470 480 mKIAA0 PMSVKHTEKLEKEFREYTEASPLEDKVVELDNIPVRLTPSGNDMKILQPHVIPVRRNYLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PMSVKHTEKLEKEFREYTEASPLEDKVVELDNIPVRLTPSGNDMKILQPHVIPVRRNYLP 430 440 450 460 470 480 490 500 510 520 530 540 mKIAA0 ALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAIFPFVFYPIKPPRSVTMDSAPKPFTDVSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAIFPFVFYPIKPPRSVTMDSAPKPFTDVSI 490 500 510 520 530 540 550 560 570 580 590 600 mKIAA0 VMRSAGHSQISRIKYFKVLIQEMDLSLDLGFVYALADLVTKAEVTEKTEVEHFHKDVEAF :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|263 VMRSAGHSQISRIKYFKVLIQEMDLSLDLGFVYVLADLVTKAEVTEKTEVEHFHKDVEAF 550 560 570 580 590 600 610 620 630 640 650 660 mKIAA0 EQEYEVVSSVDQSQVNLFEYFHISPIKLHLSVSLSSGRDEAKDSEQHGGLIPVHSLNLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EQEYEVVSSVDQSQVNLFEYFHISPIKLHLSVSLSSGRDEAKDSEQHGGLIPVHSLNLLL 610 620 630 640 650 660 670 680 690 700 710 720 mKIAA0 KSIGATLTDVQDVVFKLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KSIGATLTDVQDVVFKLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGN 670 680 690 700 710 720 730 740 750 760 770 780 mKIAA0 PFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAM 730 740 750 760 770 780 790 800 810 820 830 840 mKIAA0 AKGVAAMTMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AKGVAAMTMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQK 790 800 810 820 830 840 850 860 870 880 890 900 mKIAA0 EGAAGFFKGVGKGLVGAVTRPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EGAAGFFKGVGKGLVGAVTRPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVI 850 860 870 880 890 900 910 920 mKIAA0 RPYRLRDGSGNQMLQASKSLI ::::::::::::::::::::: gi|263 RPYRLRDGSGNQMLQASKSLI 910 920 >>gi|38566098|gb|AAH62130.1| Vps13a protein [Mus musculu (1186 aa) initn: 5991 init1: 5991 opt: 5991 Z-score: 6784.5 bits: 1267.0 E(): 0 Smith-Waterman score: 5991; 100.000% identity (100.000% similar) in 915 aa overlap (1-915:161-1075) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD :::::::::::::::::::::::::::::: gi|385 PYKVAYYIEGIENTVVTLSEGHSSQIYNVEMDQAKLHLKLLDYLNHDWKSEFYIRSSQQD 140 150 160 170 180 190 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP 200 210 220 230 240 250 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT 260 270 280 290 300 310 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI 320 330 340 350 360 370 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI 380 390 400 410 420 430 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT 440 450 460 470 480 490 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN 500 510 520 530 540 550 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL 560 570 580 590 600 610 460 470 480 490 500 510 mKIAA0 DNIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 DNIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHG 620 630 640 650 660 670 520 530 540 550 560 570 mKIAA0 AIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 AIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDLG 680 690 700 710 720 730 580 590 600 610 620 630 mKIAA0 FVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 FVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLHL 740 750 760 770 780 790 640 650 660 670 680 690 mKIAA0 SVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 SVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTS 800 810 820 830 840 850 700 710 720 730 740 750 mKIAA0 ELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 ELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEF 860 870 880 890 900 910 760 770 780 790 800 810 mKIAA0 VEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 VEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLRE 920 930 940 950 960 970 820 830 840 850 860 870 mKIAA0 GITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 GITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMAS 980 990 1000 1010 1020 1030 880 890 900 910 920 mKIAA0 STFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI ::::::::::::::::::::::::::::::::::::::::::::: gi|385 STFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQVMENGRFAKYKYFTH 1040 1050 1060 1070 1080 1090 gi|385 VMINKTDMFMITRRGVLFVTKGTFGQLTCEWQYTFDEFTKEPFIVHGRRLRIEAKERVKS 1100 1110 1120 1130 1140 1150 >>gi|81888996|sp|Q5H8C4.1|VP13A_MOUSE RecName: Full=Vacu (3166 aa) initn: 5991 init1: 5991 opt: 5991 Z-score: 6778.5 bits: 1267.3 E(): 0 Smith-Waterman score: 5991; 100.000% identity (100.000% similar) in 915 aa overlap (1-915:2141-3055) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD :::::::::::::::::::::::::::::: gi|818 PYKVAYYIEGIENTVVTLSEGHSSQIYNVEMDQAKLHLKLLDYLNHDWKSEFYIRSSQQD 2120 2130 2140 2150 2160 2170 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP 2180 2190 2200 2210 2220 2230 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT 2240 2250 2260 2270 2280 2290 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI 2300 2310 2320 2330 2340 2350 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI 2360 2370 2380 2390 2400 2410 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT 2420 2430 2440 2450 2460 2470 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN 2480 2490 2500 2510 2520 2530 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL 2540 2550 2560 2570 2580 2590 460 470 480 490 500 510 mKIAA0 DNIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 DNIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHG 2600 2610 2620 2630 2640 2650 520 530 540 550 560 570 mKIAA0 AIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 AIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDLG 2660 2670 2680 2690 2700 2710 580 590 600 610 620 630 mKIAA0 FVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 FVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLHL 2720 2730 2740 2750 2760 2770 640 650 660 670 680 690 mKIAA0 SVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTS 2780 2790 2800 2810 2820 2830 700 710 720 730 740 750 mKIAA0 ELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 ELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEF 2840 2850 2860 2870 2880 2890 760 770 780 790 800 810 mKIAA0 VEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLRE 2900 2910 2920 2930 2940 2950 820 830 840 850 860 870 mKIAA0 GITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMAS 2960 2970 2980 2990 3000 3010 880 890 900 910 920 mKIAA0 STFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI ::::::::::::::::::::::::::::::::::::::::::::: gi|818 STFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQVMENGRFAKYKYFTH 3020 3030 3040 3050 3060 3070 gi|818 VMINKTDMFMITRRGVLFVTKGTFGQLTCEWQYTFDEFTKEPFIVHGRRLRIEAKERVKS 3080 3090 3100 3110 3120 3130 >>gi|219275534|ref|NP_001094445.2| vacuolar protein sort (3167 aa) initn: 2921 init1: 2921 opt: 5796 Z-score: 6557.4 bits: 1226.4 E(): 0 Smith-Waterman score: 5796; 96.288% identity (98.799% similar) in 916 aa overlap (1-915:2141-3056) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD :::::::::::::::::::::: : .::: gi|219 PYKIAYYLEGIENTVCTLSEGHSSQIYNVEMDQAKLHLKLLDYLNHDWKSEFQIDPNQQD 2120 2130 2140 2150 2160 2170 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP 2180 2190 2200 2210 2220 2230 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT ::: ::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|219 PNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIKCKGLKMEYQVGVT 2240 2250 2260 2270 2280 2290 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :.::::::::::::::::::::::.:::::.:::::::::::::: :::::::::.:::: gi|219 IDLSSFNITRIVTFIPFYMIKNKSRYHISVTEEGSDKWLSLDLEQCIPFWPENASDILLI 2300 2310 2320 2330 2340 2350 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::: :::::::::::.::::::.:::::.:::::::::::::::::::.:::::::: gi|219 QVERSEGPPKRIYFNKQDSCILLRLDNELGGVIAEVNLAEHSTVITFSDYHEGAATFLLI 2360 2370 2380 2390 2400 2410 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|219 NHTKSDPVQYNQSSLSEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT 2420 2430 2440 2450 2460 2470 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN 2480 2490 2500 2510 2520 2530 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL ::::::::::::::::::::.:::::.::::::::::::::::::::::.:::::::::: gi|219 NYTKQEVAYIGITSSDVVWETKPKKKSRWKPMSVKHTEKLEKEFREYTESSPLEDKVVEL 2540 2550 2560 2570 2580 2590 460 470 480 490 500 mKIAA0 DN-IPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH :: ::: :::::::::::.:::: :::::::::::::::::::::::::::::::::::: gi|219 DNSIPVLLTPSGNDMKILEPHVIAVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH 2600 2610 2620 2630 2640 2650 510 520 530 540 550 560 mKIAA0 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|219 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL 2660 2670 2680 2690 2700 2710 570 580 590 600 610 620 mKIAA0 GFVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLH :::::::::: :.:::::::::.::.::::::::.::::::::::::::::::::::::: gi|219 GFVYALADLVPKTEVTEKTEVEYFHRDVEAFEQEFEVVSSVDQSQVNLFEYFHISPIKLH 2720 2730 2740 2750 2760 2770 630 640 650 660 670 680 mKIAA0 LSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT ::::::::::::::.::::::::::::::::::::::::::::::::::::.:::::::: gi|219 LSVSLSSGRDEAKDTEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFQLNYQFHTT 2780 2790 2800 2810 2820 2830 690 700 710 720 730 740 mKIAA0 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE 2840 2850 2860 2870 2880 2890 750 760 770 780 790 800 mKIAA0 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR 2900 2910 2920 2930 2940 2950 810 820 830 840 850 860 mKIAA0 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMA :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|219 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMA 2960 2970 2980 2990 3000 3010 870 880 890 900 910 920 mKIAA0 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI :::::::::::::::::::::::::::::::::::::::.:::::: gi|219 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFT 3020 3030 3040 3050 3060 3070 gi|219 HVMVNKTDMFMITRCGVLFVTKGTFGQLTCEWQYTFDEFTKEPFIVHGRRLRIEAKERVK 3080 3090 3100 3110 3120 3130 >>gi|42454404|emb|CAF25186.1| chorein 1D [Homo sapiens] (3069 aa) initn: 5538 init1: 2858 opt: 5540 Z-score: 6267.4 bits: 1172.7 E(): 0 Smith-Waterman score: 5540; 90.022% identity (97.831% similar) in 922 aa overlap (1-921:2148-3069) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD . .:.::::::::::::::::..:. .::: gi|424 PYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQD 2120 2130 2140 2150 2160 2170 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :.:..:::.:::::.:::::.:::::::::::::::::::::::.::::::::::::::: gi|424 ISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHP 2180 2190 2200 2210 2220 2230 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT ::: ::::::::::::::::::::::::::::.::::::::::::..::::::.:::::: gi|424 PNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVT 2240 2250 2260 2270 2280 2290 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :.:::::::::::: :::::::::::::::::::.:::::::::: :::::: ::. ::: gi|424 IDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLI 2300 2310 2320 2330 2340 2350 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::.:::::::.::::::::::::::::::::: :::::::::::: gi|424 QVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLI 2360 2370 2380 2390 2400 2410 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT ::::.. ::::::::.::::::::::::.::::::::::.::: : .:.::::.::::: gi|424 NHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMM 2420 2430 2440 2450 2460 2470 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN ::..:.:::::::::::::::::::::::::::::::::::::: :...::::::::::: gi|424 PIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVN 2480 2490 2500 2510 2520 2530 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL ::::::::::::::::::::.::::::::::::::::::::.::.::::.:: ::::..: gi|424 NYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQL 2540 2550 2560 2570 2580 2590 460 470 480 490 500 mKIAA0 D-NIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH : :.::::::.:..::::::::: .::::::::::::::::::::::::::::::::::: gi|424 DTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH 2600 2610 2620 2630 2640 2650 510 520 530 540 550 560 mKIAA0 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDL ::.:::::::.:::.::::::::::::::::::::::::::::::::::::::::: ::: gi|424 GAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL 2660 2670 2680 2690 2700 2710 570 580 590 600 610 620 mKIAA0 GFVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLH ::.:::.::.:.:::::.:::: ::::.:::..::...: ::::::.:.::::::::::: gi|424 GFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLH 2720 2730 2740 2750 2760 2770 630 640 650 660 670 680 mKIAA0 LSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT :::::::::.:::::.:.:::::::::::::::::::::::::::::::::::::::::: gi|424 LSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT 2780 2790 2800 2810 2820 2830 690 700 710 720 730 740 mKIAA0 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 SDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE 2840 2850 2860 2870 2880 2890 750 760 770 780 790 800 mKIAA0 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::.: gi|424 FVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFR 2900 2910 2920 2930 2940 2950 810 820 830 840 850 860 mKIAA0 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMA ::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::::: gi|424 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMA 2960 2970 2980 2990 3000 3010 870 880 890 900 910 920 mKIAA0 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI :::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|424 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQASKSLI 3020 3030 3040 3050 3060 >>gi|114625101|ref|XP_001147843.1| PREDICTED: vacuolar p (3069 aa) initn: 5535 init1: 2857 opt: 5537 Z-score: 6264.0 bits: 1172.1 E(): 0 Smith-Waterman score: 5537; 89.913% identity (97.831% similar) in 922 aa overlap (1-921:2148-3069) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD . .:.::::::::::::::::..:. .::: gi|114 PYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQD 2120 2130 2140 2150 2160 2170 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :.:..:::.:::::.:::::.:::::::::::::::::::::::.::::::::::::::: gi|114 ISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHP 2180 2190 2200 2210 2220 2230 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT ::: ::::::::::::::::::::::::::::.::::::::::::..::::::.:::::: gi|114 PNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVT 2240 2250 2260 2270 2280 2290 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :.:::::::::::: :::::::::::::::::::.:::::::::: :::::: ::. ::: gi|114 IDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGDDKWLSLDLEQCIPFWPEYASSKLLI 2300 2310 2320 2330 2340 2350 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::.:::::::.::::::::::::::::::::: :::::::::::: gi|114 QVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLI 2360 2370 2380 2390 2400 2410 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT ::::.. ::::::::.::::::::::::.::::::::::.::: : .:.::::.::::: gi|114 NHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMM 2420 2430 2440 2450 2460 2470 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN ::..:.:::::::::::::::::::::::::::.:::::::::: :...::::::::::: gi|114 PIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVAYESEKAELAEQEIAVALQDVGISLVN 2480 2490 2500 2510 2520 2530 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL ::::::::::::::::::::.::::::::::::::::::::.::.::::.:: ::::.:: gi|114 NYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIEL 2540 2550 2560 2570 2580 2590 460 470 480 490 500 mKIAA0 D-NIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH : :.::::::.:..::::::::: .:::::::::::::::::::::::::::::.::::: gi|114 DTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQVQNQIH 2600 2610 2620 2630 2640 2650 510 520 530 540 550 560 mKIAA0 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDL ::.:::::::.:::.::::::::::::::::::::::::::::::::::::::::: ::: gi|114 GAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL 2660 2670 2680 2690 2700 2710 570 580 590 600 610 620 mKIAA0 GFVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLH ::.:::.::.:.:::::.:::: ::::.:::..::...: ::::::.:.::::::::::: gi|114 GFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLH 2720 2730 2740 2750 2760 2770 630 640 650 660 670 680 mKIAA0 LSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT :::::::::.:::::.:.:::::::::::::::::::::::::::::::::::::::::: gi|114 LSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT 2780 2790 2800 2810 2820 2830 690 700 710 720 730 740 mKIAA0 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE 2840 2850 2860 2870 2880 2890 750 760 770 780 790 800 mKIAA0 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::.: gi|114 FVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFR 2900 2910 2920 2930 2940 2950 810 820 830 840 850 860 mKIAA0 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMA ::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::::: gi|114 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMA 2960 2970 2980 2990 3000 3010 870 880 890 900 910 920 mKIAA0 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI :::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|114 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQASKSLI 3020 3030 3040 3050 3060 >>gi|27697156|gb|AAH41852.1| VPS13A protein [Homo sapien (1246 aa) initn: 5506 init1: 2827 opt: 5508 Z-score: 6236.6 bits: 1165.7 E(): 0 Smith-Waterman score: 5508; 89.956% identity (97.817% similar) in 916 aa overlap (1-915:299-1214) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD . .:.::::::::::::::::..:. .::: gi|276 PYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQD 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :.:..:::.:::::.:::::.:::::::::::::::::::::::.::::::::::::::: gi|276 ISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHP 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT ::: ::::::::::::::::::::::::::::.::::::::::::..::::::.:::::: gi|276 PNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVT 390 400 410 420 430 440 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :.:::::::::::: :::::::::::::::::::.:::::::::: :::::: ::. ::: gi|276 IDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSRLLI 450 460 470 480 490 500 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::.:::::::.::::::::::::::::::::: :::::::::::: gi|276 QVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLI 510 520 530 540 550 560 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT ::::.. ::::::::.::::::::::::.::::::::::.::: : .:.::::.::::: gi|276 NHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMM 570 580 590 600 610 620 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN ::..:.:::::::::::::::::::::::::::::::::::::: :...::::::::::: gi|276 PIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVN 630 640 650 660 670 680 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL ::::::::::::::::::::.::::::::::::::::::::.::.::::.:: ::::..: gi|276 NYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQL 690 700 710 720 730 740 460 470 480 490 500 mKIAA0 D-NIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH : :.::::::.:..::::::::: .::::::::::::::::::::::::::::::::::: gi|276 DTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH 750 760 770 780 790 800 510 520 530 540 550 560 mKIAA0 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDL ::.:::::::.:::.::::::::::::::::::::::::::::::::::::::::: ::: gi|276 GAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL 810 820 830 840 850 860 570 580 590 600 610 620 mKIAA0 GFVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLH ::.:::.::.:.:::::.:::: ::::.:::..::...: ::::::.:.::::::::::: gi|276 GFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLH 870 880 890 900 910 920 630 640 650 660 670 680 mKIAA0 LSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT :::::::::.:::::.:.:::::::::::::::::::::::::::::::::::::::::: gi|276 LSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT 930 940 950 960 970 980 690 700 710 720 730 740 mKIAA0 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 SDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE 990 1000 1010 1020 1030 1040 750 760 770 780 790 800 mKIAA0 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::.: gi|276 FVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFR 1050 1060 1070 1080 1090 1100 810 820 830 840 850 860 mKIAA0 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMA ::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::::: gi|276 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMA 1110 1120 1130 1140 1150 1160 870 880 890 900 910 920 mKIAA0 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI :::::::::::::::::::::::::::::::::::::::.:::::: gi|276 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQKIQFYREWIMTHSS 1170 1180 1190 1200 1210 1220 gi|276 SSDDDDDDDDDDESDLNH 1230 1240 >>gi|14289183|dbj|BAB59128.1| chorein [Homo sapiens] (3095 aa) initn: 5507 init1: 2827 opt: 5509 Z-score: 6232.2 bits: 1166.2 E(): 0 Smith-Waterman score: 5509; 89.956% identity (97.817% similar) in 916 aa overlap (1-915:2148-3063) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD . .:.::::::::::::::::..:. .::: gi|142 PYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQD 2120 2130 2140 2150 2160 2170 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :.:..:::.:::::.:::::.:::::::::::::::::::::::.::::::::::::::: gi|142 ISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHP 2180 2190 2200 2210 2220 2230 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT ::: ::::::::::::::::::::::::::::.::::::::::::..::::::.:::::: gi|142 PNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVT 2240 2250 2260 2270 2280 2290 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :.:::::::::::: :::::::::::::::::::.:::::::::: :::::: ::. ::: gi|142 IDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLI 2300 2310 2320 2330 2340 2350 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::.:::::::.::::::::::::::::::::: :::::::::::: gi|142 QVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLI 2360 2370 2380 2390 2400 2410 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT ::::.. ::::::::.::::::::::::.::::::::::.::: : .:.::::.::::: gi|142 NHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMM 2420 2430 2440 2450 2460 2470 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN ::..:.:::::::::::::::::::::::::::::::::::::: :...::::::::::: gi|142 PIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVN 2480 2490 2500 2510 2520 2530 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL ::::::::::::::::::::.::::::::::::::::::::.::.::::.:: ::::..: gi|142 NYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQL 2540 2550 2560 2570 2580 2590 460 470 480 490 500 mKIAA0 D-NIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH : :.::::::.:..::::::::: .::::::::::::::::::::::::::::::::::: gi|142 DTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH 2600 2610 2620 2630 2640 2650 510 520 530 540 550 560 mKIAA0 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDL ::.:::::::.:::.::::::::::::::::::::::::::::::::::::::::: ::: gi|142 GAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL 2660 2670 2680 2690 2700 2710 570 580 590 600 610 620 mKIAA0 GFVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLH ::.:::.::.:.:::::.:::: ::::.:::..::...: ::::::.:.::::::::::: gi|142 GFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLH 2720 2730 2740 2750 2760 2770 630 640 650 660 670 680 mKIAA0 LSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT :::::::::.:::::.:.:::::::::::::::::::::::::::::::::::::::::: gi|142 LSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT 2780 2790 2800 2810 2820 2830 690 700 710 720 730 740 mKIAA0 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|142 SDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE 2840 2850 2860 2870 2880 2890 750 760 770 780 790 800 mKIAA0 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::.: gi|142 FVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFR 2900 2910 2920 2930 2940 2950 810 820 830 840 850 860 mKIAA0 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMA ::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::::: gi|142 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMA 2960 2970 2980 2990 3000 3010 870 880 890 900 910 920 mKIAA0 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI :::::::::::::::::::::::::::::::::::::::.:::::: gi|142 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQKIQFYREWIMTHSS 3020 3030 3040 3050 3060 3070 gi|142 SSDDDDDDDDDDESDLNH 3080 3090 >>gi|42406423|emb|CAE75581.1| chorein 2A [Homo sapiens] (3135 aa) initn: 5507 init1: 2827 opt: 5509 Z-score: 6232.1 bits: 1166.2 E(): 0 Smith-Waterman score: 5509; 89.956% identity (97.817% similar) in 916 aa overlap (1-915:2109-3024) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD . .:.::::::::::::::::..:. .::: gi|424 PYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQD 2080 2090 2100 2110 2120 2130 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :.:..:::.:::::.:::::.:::::::::::::::::::::::.::::::::::::::: gi|424 ISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHP 2140 2150 2160 2170 2180 2190 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT ::: ::::::::::::::::::::::::::::.::::::::::::..::::::.:::::: gi|424 PNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVT 2200 2210 2220 2230 2240 2250 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :.:::::::::::: :::::::::::::::::::.:::::::::: :::::: ::. ::: gi|424 IDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLI 2260 2270 2280 2290 2300 2310 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::.:::::::.::::::::::::::::::::: :::::::::::: gi|424 QVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLI 2320 2330 2340 2350 2360 2370 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT ::::.. ::::::::.::::::::::::.::::::::::.::: : .:.::::.::::: gi|424 NHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMM 2380 2390 2400 2410 2420 2430 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN ::..:.:::::::::::::::::::::::::::::::::::::: :...::::::::::: gi|424 PIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVN 2440 2450 2460 2470 2480 2490 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL ::::::::::::::::::::.::::::::::::::::::::.::.::::.:: ::::..: gi|424 NYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQL 2500 2510 2520 2530 2540 2550 460 470 480 490 500 mKIAA0 D-NIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH : :.::::::.:..::::::::: .::::::::::::::::::::::::::::::::::: gi|424 DTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH 2560 2570 2580 2590 2600 2610 510 520 530 540 550 560 mKIAA0 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDL ::.:::::::.:::.::::::::::::::::::::::::::::::::::::::::: ::: gi|424 GAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL 2620 2630 2640 2650 2660 2670 570 580 590 600 610 620 mKIAA0 GFVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLH ::.:::.::.:.:::::.:::: ::::.:::..::...: ::::::.:.::::::::::: gi|424 GFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLH 2680 2690 2700 2710 2720 2730 630 640 650 660 670 680 mKIAA0 LSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT :::::::::.:::::.:.:::::::::::::::::::::::::::::::::::::::::: gi|424 LSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT 2740 2750 2760 2770 2780 2790 690 700 710 720 730 740 mKIAA0 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|424 SDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE 2800 2810 2820 2830 2840 2850 750 760 770 780 790 800 mKIAA0 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::.: gi|424 FVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFR 2860 2870 2880 2890 2900 2910 810 820 830 840 850 860 mKIAA0 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMA ::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::::: gi|424 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMA 2920 2930 2940 2950 2960 2970 870 880 890 900 910 920 mKIAA0 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI :::::::::::::::::::::::::::::::::::::::.:::::: gi|424 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFT 2980 2990 3000 3010 3020 3030 gi|424 HVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVHGRRLRIEAKERVK 3040 3050 3060 3070 3080 3090 >>gi|14388939|gb|AAK61861.1|AF337532_1 chorea-acanthocyt (3174 aa) initn: 5507 init1: 2827 opt: 5509 Z-score: 6232.0 bits: 1166.2 E(): 0 Smith-Waterman score: 5509; 89.956% identity (97.817% similar) in 916 aa overlap (1-915:2148-3063) 10 20 30 mKIAA0 MDQAKLHLKLLDYLNHDWKSEFYIRSSQQD . .:.::::::::::::::::..:. .::: gi|143 PYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQD 2120 2130 2140 2150 2160 2170 40 50 60 70 80 90 mKIAA0 INFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKADGIHRKHP :.:..:::.:::::.:::::.:::::::::::::::::::::::.::::::::::::::: gi|143 ISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHP 2180 2190 2200 2210 2220 2230 100 110 120 130 140 150 mKIAA0 PNYTKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVT ::: ::::::::::::::::::::::::::::.::::::::::::..::::::.:::::: gi|143 PNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVT 2240 2250 2260 2270 2280 2290 160 170 180 190 200 210 mKIAA0 INLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQSIPFWPENASNILLI :.:::::::::::: :::::::::::::::::::.:::::::::: :::::: ::. ::: gi|143 IDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLI 2300 2310 2320 2330 2340 2350 220 230 240 250 260 270 mKIAA0 QVERSEDPPKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI :::::::::::::::::.:::::::.::::::::::::::::::::: :::::::::::: gi|143 QVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLI 2360 2370 2380 2390 2400 2410 280 290 300 310 320 330 mKIAA0 NHTKSDPVQYNQSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMT ::::.. ::::::::.::::::::::::.::::::::::.::: : .:.::::.::::: gi|143 NHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMM 2420 2430 2440 2450 2460 2470 340 350 360 370 380 390 mKIAA0 PISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVN ::..:.:::::::::::::::::::::::::::::::::::::: :...::::::::::: gi|143 PIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVN 2480 2490 2500 2510 2520 2530 400 410 420 430 440 450 mKIAA0 NYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKVVEL ::::::::::::::::::::.::::::::::::::::::::.::.::::.:: ::::..: gi|143 NYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQL 2540 2550 2560 2570 2580 2590 460 470 480 490 500 mKIAA0 D-NIPVRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH : :.::::::.:..::::::::: .::::::::::::::::::::::::::::::::::: gi|143 DTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIH 2600 2610 2620 2630 2640 2650 510 520 530 540 550 560 mKIAA0 GAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLSLDL ::.:::::::.:::.::::::::::::::::::::::::::::::::::::::::: ::: gi|143 GAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL 2660 2670 2680 2690 2700 2710 570 580 590 600 610 620 mKIAA0 GFVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVDQSQVNLFEYFHISPIKLH ::.:::.::.:.:::::.:::: ::::.:::..::...: ::::::.:.::::::::::: gi|143 GFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLH 2720 2730 2740 2750 2760 2770 630 640 650 660 670 680 mKIAA0 LSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT :::::::::.:::::.:.:::::::::::::::::::::::::::::::::::::::::: gi|143 LSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT 2780 2790 2800 2810 2820 2830 690 700 710 720 730 740 mKIAA0 SELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|143 SDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE 2840 2850 2860 2870 2880 2890 750 760 770 780 790 800 mKIAA0 FVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLR ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::.: gi|143 FVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFR 2900 2910 2920 2930 2940 2950 810 820 830 840 850 860 mKIAA0 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMA ::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::::: gi|143 EGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMA 2960 2970 2980 2990 3000 3010 870 880 890 900 910 920 mKIAA0 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGSGNQMLQASKSLI :::::::::::::::::::::::::::::::::::::::.:::::: gi|143 SSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFT 3020 3030 3040 3050 3060 3070 gi|143 HVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVHGRRLRIEAKERVK 3080 3090 3100 3110 3120 3130 921 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 10:26:59 2009 done: Tue Mar 17 10:35:43 2009 Total Scan time: 1144.280 Total Display time: 0.760 Function used was FASTA [version 34.26.5 April 26, 2007]