Comparison of KIAA cDNA sequences between mouse and human (FLJ00139)
<<Original sequence data>>
mouse mFLJ00139 (mbp09110) length: 2994 bp, CDS: 2 - 2980
human (sh03241) length: 5250 bp, CDS: 1 - 1758
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 90 - 90 1 0 0.0
CDS: 91 - 1785 890 376 29.7
3'UTR: 1786 - 5021 1126 596 34.6
amino acid
CDS: 91 - 1785 267 289 52.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mbp09110 1 .................................................. 1
sh03241 1 CGGAGGGCGGTTCCGCCGCGCGGCGGGCGCGCCGCCCACATGGCGGCCAT 50
R R A V P P R G G R A A H M A A I
51 ----+----*----+----*----+----*----+----*----+----* 100
Y R D V
mbp09110 1 .......................................CTACCGGGACG 11
|||||| ||||
sh03241 51 CAGGGCGCTGCAACAGTGGTGCCGGCAGCAGTGCGAGGGCTACCGCGACG 100
R A L Q Q W C R Q Q C E G Y R D V
101 ----+----*----+----*----+----*----+----*----+----* 150
S I T N M T T S F R D G L A F C
mbp09110 12 TGAGCATCACCAACATGACCACCTCGTTCCGCGATGGCCTGGCCTTCTGC 61
||| ||| |||||||||||| ||||||||||| |||||||| ||||||
sh03241 101 TGAATATCTGCAACATGACCACGTCGTTCCGCGACGGCCTGGCTTTCTGC 150
N I C N M T T S F R D G L A F C
151 ----+----*----+----*----+----*----+----*----+----* 200
A I L H R H R P D L I N F S A L R
mbp09110 62 GCTATCTTGCACCGACACCGGCCTGACCTTATAAACTTCAGTGCCCTCCG 111
|| ||| ||||||| |||||||| ||||| |||||||||||||| |||
sh03241 151 GCCATCCTGCACCGCCACCGGCCCGACCTCATAAACTTCAGTGCTCTCAA 200
A I L H R H R P D L I N F S A L K
201 ----+----*----+----*----+----*----+----*----+----* 250
K E N I Y E N N K L A F Q V A E E
mbp09110 112 GAAGGAAAACATTTACGAGAACAACAAGTTGGCCTTCCAAGTGGCTGAGG 161
||||||||| ||||| || ||||| || ||||||||| ||||| ||||
sh03241 201 GAAGGAAAATATTTATGAAAACAATAAACTGGCCTTCCGCGTGGCCGAGG 250
K E N I Y E N N K L A F R V A E E
251 ----+----*----+----*----+----*----+----*----+----* 300
Q L G I P A L L D A E D M V A L
mbp09110 162 AACAGCTGGGCATCCCAGCCCTGCTAGACGCTGAGGACATGGTGGCCTTG 211
| || |||||||||||||| |||| || || ||||||||||||||||||
sh03241 251 AGCACTTGGGCATCCCAGCCTTGCTGGATGCCGAGGACATGGTGGCCTTG 300
H L G I P A L L D A E D M V A L
301 ----+----*----+----*----+----*----+----*----+----* 350
K V P D R L S I L T Y V S Q Y Y N
mbp09110 212 AAGGTTCCAGACCGGCTGAGCATTCTCACCTATGTGTCACAATACTACAA 261
||||| || |||||||||||||| | ||||| ||||| || || |||||
sh03241 301 AAGGTGCCTGACCGGCTGAGCATCTTGACCTACGTGTCCCAGTATTACAA 350
K V P D R L S I L T Y V S Q Y Y N
351 ----+----*----+----*----+----*----+----*----+----* 400
Y F H G R S P I G G M A G I K R P
mbp09110 262 CTACTTCCATGGCCGGTCCCCAATTGGGGGCATGGCTGGCATAAAGAGAC 311
||||||||| ||||| ||||| |||||||||||||| ||| | |||||
sh03241 351 CTACTTCCACGGCCGCTCCCCCATTGGGGGCATGGCAGGCGTGAAGAGGG 400
Y F H G R S P I G G M A G V K R A
401 ----+----*----+----*----+----*----+----*----+----* 450
S S D S T E E L S G K K G L S Q
mbp09110 312 CCTCATCCGATTCGACCGAAGAACTTTCTGGAAAGAAGGGCCTGTCCCAG 361
|||| || || || || | || || ||||||| | ||||
sh03241 401 CCTCGGAGGACTCTGAGGAGGAGCCGTCAGGGAAGAAGGCTCCAGTCCAG 450
S E D S E E E P S G K K A P V Q
451 ----+----*----+----*----+----*----+----*----+----* 500
P A K L P S P A Q T Q R S P L S P
mbp09110 362 CCTGCCAAGTTGCCCTCGCCGGCTCAAACCCAGAGGTCACCACTGTCCCC 411
| |||||| |||||||||| || | | ||| || | | ||||| || ||
sh03241 451 GCGGCCAAGCTGCCCTCGCCCGCCCCAGCCCGGAAGCCTCCACTATCTCC 500
A A K L P S P A P A R K P P L S P
501 ----+----*----+----*----+----*----+----*----+----* 550
A R T N P V V Q R N E G G S Q R P
mbp09110 412 AGCTCGGACAAACCCTGTGGTTCAGAGGAATGAAGGTGGCTCACAAAGAC 461
||| | ||||||||||||||| ||||||| | | || || | |
sh03241 501 AGCCCAGACAAACCCTGTGGTCCAGAGGAGGAATGAGGGTGCAGGGGGCC 550
A Q T N P V V Q R R N E G A G G P
551 ----+----*----+----*----+----*----+----*----+----* 600
S P K A A P G T A G S S V S S I
mbp09110 462 CATCCCCAAAGGCTGCTCCGGGGACCGCGGGAAGCTCTGTCAGCAGTATC 511
| |||| ||| ||| | || ||||| |||| |||||||| | |
sh03241 551 CGCCCCCCAAGACTGACCAGGCATTGGCGGGCAGCTTGGTCAGCAGCACC 600
P P K T D Q A L A G S L V S S T
601 ----+----*----+----*----+----*----+----*----+----* 650
C G V C G K H V H L V Q R H L A D
mbp09110 512 TGTGGGGTCTGTGGCAAACATGTTCACCTTGTGCAGCGGCACCTGGCTGA 561
|| |||||||| ||||| || || ||||| || |||||||||||||| ||
sh03241 601 TGCGGGGTCTGCGGCAAGCACGTGCACCTGGTACAGCGGCACCTGGCCGA 650
C G V C G K H V H L V Q R H L A D
651 ----+----*----+----*----+----*----+----*----+----* 700
G R L Y H R S C F R C K Q C S S T
mbp09110 562 CGGGCGCCTCTACCACCGAAGCTGCTTCAGGTGTAAACAGTGCTCCAGCA 611
|||| | || |||||||| ||||||||||||||||| ||||||||| |||
sh03241 651 CGGGAGGCTTTACCACCGGAGCTGCTTCAGGTGTAAGCAGTGCTCCTGCA 700
G R L Y H R S C F R C K Q C S C T
701 ----+----*----+----*----+----*----+----*----+----* 750
L H S G A Y R A T G E P G V F V
mbp09110 612 CGCTGCACTCGGGGGCCTACCGTGCCACGGGAGAGCCCGGAGTCTTCGTC 661
|||||||||||||||||||| ||||| |||||||| || |||||||
sh03241 701 CGCTGCACTCGGGGGCCTACAAGGCCACAGGAGAGCCGGGCACCTTCGTC 750
L H S G A Y K A T G E P G T F V
751 ----+----*----+----*----+----*----+----*----+----* 800
C T H H S S E V T S V S P K S S N
mbp09110 662 TGTACCCACCACAGCTCAGAAGTCACCTCTGTGAGCCCCAAGTCATCAAA 711
|| ||| |||| | | | || | |||||| |||||||||| |
sh03241 751 TGCACCAGCCACCTCCCCGCAGCCGCCTCTGCAAGCCCCAAGTTGACGGG 800
C T S H L P A A A S A S P K L T G
801 ----+----*----+----*----+----*----+----*----+----* 850
L A S R K P G G V T A D T R S V G
mbp09110 712 CCTGGCCTCCAGGAAACCAGGGGGTGTCACTGCAGACACCAGGTCAGTCG 761
|||| | || | | ||||||| | || || ||||| | |
sh03241 801 TCTGGTCCCCCGACAGCCAGGGGCCATGGGTGTGGATTCCAGGACCTCCT 850
L V P R Q P G A M G V D S R T S C
851 ----+----*----+----*----+----*----+----*----+----* 900
V S W T V Q E A K R
mbp09110 762 GCGTCTCATGGACGGTTCAGGAGGCAAATGGAGAGGGGACACCACTGAGG 811
| | || || || ||||||||||| | |
sh03241 851 GTTCCCCACAGAAGGCCCAGGAGGCAAA..................CAAG 882
S P Q K A Q E A N K
901 ----+----*----+----*----+----*----+----*----+----* 950
V R T A A W E H A G G N T T A K G
mbp09110 812 GTCAGGACAGCAGCATGGGAACACGCTGGAGGAAACACAACCGCCAAAGG 861
| ||| | | || ||||| | |||| || ||| | | |||| |
sh03241 883 GCCAGACCGTCGGCCTGGGAGCCTGCTGCGGGCAACTCGCCTGCCAGGGC 932
A R P S A W E P A A G N S P A R A
951 ----+----*----+----*----+----*----+----*----+----* 1000
F V Q T E L K P P S - S Q V H
mbp09110 862 TTTTGTCCAGACGGAACTTAAGCCACCATCTA......CCTCCCAAGTCC 905
|| || | | | || || || || | | || | ||||
sh03241 933 TTCCGTTCCAGCTGCACCCAACCCTGCAGCCACCAGCGCCACGTCCGTCC 982
S V P A A P N P A A T S A T S V H
1001 ----+----*----+----*----+----*----+----*----+----* 1050
V G S S A G P P T S T V T T
mbp09110 906 ACGTGGGGAGCTCTGCGGGGCCCAAGCTACCCACGAGCACAGTGACTACT 955
||||| ||||| | || ||||| | |||| || | |
sh03241 983 ACGTGAGGAGCCCAGCCAGGCCC......TCTGAGAGCCGCCTGGCCCCC 1026
V R S P A R P S E S R L A P
1051 ----+----*----+----*----+----*----+----*----+----* 1100
T S V T S K A L T H V T N S S P T
mbp09110 956 ACTTCTGTGACTAGCAAAGCTCTCACCCATGTGACGAATAGCTCCCCAAC 1005
||| | | | |||| | | | | |||||| ||||||||||| |
sh03241 1027 ACTCCCACGGAGGGGAAAGTCCGCCCTCGTGTGACCAATAGCTCCCCGAT 1076
T P T E G K V R P R V T N S S P M
1101 ----+----*----+----*----+----*----+----*----+----* 1150
G W S S P A Q S S P A F N S R P
mbp09110 1006 AGGATGGTCATCGCCTGCCCAGAGCAGCCCAGCGAACTTCAACTCCCGCC 1055
|| ||||| || |||||| | ||| ||||| ||||| |
sh03241 1077 GGGCTGGTCGTCAGCTGCCCCGTGCACAGCAGCG...GCTGCCTCCCATC 1123
G W S S A A P C T A A A A S H P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
V V S P S A R N T H L P G S Q G
mbp09110 1056 CAGTTGTATCCCCAAGTGCTCGGAACACTCACCTACCTGGGTCCCAAGGG 1105
| | || |||| ||||| | || ||| || | |||| ||
sh03241 1124 CCGCCGTGCCCCCGAGTGCCCCAGACCCTCGCCCGGCCACACCCCAGGGT 1173
A V P P S A P D P R P A T P Q G
1201 ----+----*----+----*----+----*----+----*----+----* 1250
Q T A - K G V K T Q L N L N S
mbp09110 1106 CAGACAGCCTC......AAAAGGTGTTAAGACTCAGCTCAACTTGAACTC 1149
| |||| | || | | | || |||| | | |||
sh03241 1174 GGGGGAGCCCCCCGAGTGGCAGCTCCTCAAACCACACTCAGTTCAAGCTC 1223
G G A P R V A A P Q T T L S S S S
1251 ----+----*----+----*----+----*----+----*----+----* 1300
E S S N T A V T P A W T S S A S K
mbp09110 1150 AGAGTCTTCAAACACAGCGGTCACCCCAGCCTGGACTTCCTCAGCCTCTA 1199
||| || ||| | || | ||||||||||||| | || ||||| |
sh03241 1224 CACATCTGCAGCCACGGTGGACCCCCCAGCCTGGACCCCGTCCGCCTCCA 1273
T S A A T V D P P A W T P S A S R
1301 ----+----*----+----*----+----*----+----*----+----* 1350
T Q Q A R E K F F Q T P P S A P
mbp09110 1200 AGACCCAGCAGGCCCGAGAGAAATTTTTCCAGACCCCTCCCTCGGCCCCA 1249
||||||||||||||| | || |||||||| || | | | ||||
sh03241 1274 GGACCCAGCAGGCCCGGAATAAGTTTTTCCAAACATCAGCAGTGCCCCCC 1323
T Q Q A R N K F F Q T S A V P P
1351 ----+----*----+----*----+----*----+----*----+----* 1400
-
mbp09110 1250 G................................................. 1250
|
sh03241 1324 GGCACCAGCCTTTCTGGCAGAGGTCCCACCCCGTCACTTGTTCTATCCAA 1373
G T S L S G R G P T P S L V L S K
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mbp09110 1251 .................................................. 1251
sh03241 1374 GGACAGCAGCAAGGAGCAGGCGCGGAACTTCCTCAAGCAGGCCCTCTCAG 1423
D S S K E Q A R N F L K Q A L S A
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mbp09110 1251 .................................................. 1251
sh03241 1424 CGCTGGAAGAGGCTGGCGCTCCGGCGCCTGGCAGGCCCTCCCCAGCCACT 1473
L E E A G A P A P G R P S P A T
1501 ----+----*----+----*----+----*----+----*----+----* 1550
P Q P Q P Q P Q P P P A -
mbp09110 1251 .........CCCCAGCCTCAGCCCCAGCCCCAGCCCCCACCAGCAA.... 1287
||| |||||||| | | | | |||| |||||
sh03241 1474 GCCGCTGTTCCCAGTTCTCAGCCCAAAACTGAAGCACCACAAGCAAGTCC 1523
A A V P S S Q P K T E A P Q A S P
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mbp09110 1288 .................................................. 1288
sh03241 1524 CTTAGCCAAGCCGTTACAGTCCTCGTCTCCCCGGGTGCTTGGCCTCCCTT 1573
L A K P L Q S S S P R V L G L P S
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mbp09110 1288 .................................................. 1288
sh03241 1574 CGAGGATGGAACCGCCAGCCCCGCTGAGCACGAGCAGTACCTCTCAGGCA 1623
R M E P P A P L S T S S T S Q A
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mbp09110 1288 .................................................. 1288
sh03241 1624 TCCGCGTTGCCCCCGGCAGGCAGGAGGAACTTGGCTGAATCCTCAGGGGT 1673
S A L P P A G R R N L A E S S G V
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mbp09110 1288 .................................................. 1288
sh03241 1674 CGGCAGGGTGGGTGCTGGCTCCAGGCCGAAGCCAGAGGCCCCGATGGCAA 1723
G R V G A G S R P K P E A P M A K
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbp09110 1288 .................................................. 1288
sh03241 1724 AGGGTAAAAGCACCACCTTAACGCAGGGTGAGTAAGGGGCTGGGAGGCAG 1773
G K S T T L T Q G E *
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mbp09110 1288 ...........GGTCCCCACTGTAGTGACTGTCCCC........ACCAGC 1318
|| || || | |||| ||||| | ||
sh03241 1774 GAGGCCCCGGGGGCCCGCAGCTCTGGGACTCTCCCCTGGCCGCACTCTGC 1823
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mbp09110 1319 AAGGTCCCCAATGTGGTGACTGCCCCCACCAGCAAGGTCCCCACTGTAGT 1368
| || | | | | | |||| || || | | | | |
sh03241 1824 AGTGTGTGCGGTTTCATCATCAGCCCCGCCCGCCTTCCTCTCCGTCTCAT 1873
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mbp09110 1369 GACTGTCCCC............................ACCAGCAAGGTC 1390
|||||| | || | |
sh03241 1874 CTCTGTCCTCCGTGACACCTGCTCGCAGCCTCCTGGGGTCCTGGTGCGCT 1923
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mbp09110 1391 CCCACTGTGGTGTCTGC................................. 1407
| | ||||||| ||||
sh03241 1924 CTCTGTGTGGTGGCTGCAAATGTCCTCAGGGCTATGCTGTTTGCCGGCAC 1973
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mbp09110 1408 ........CCCCACCAGCAAGGTCCCTACTGTGGTGTCTGCCCCCACCAG 1449
||||| | || | |||| ||| | |||| || |
sh03241 1974 CCAGCCCACCCCATCCGC.ACGTCCTGCAGGTGCCTGCAGCCCAGCCCTG 2022
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbp09110 1450 CAAGGTCC.......................................... 1457
|| ||||
sh03241 2023 CAGCGTCCCGCTCAGCTCGGTCTGGCAGTTACATCCTGTGGCTAGCAGTG 2072
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbp09110 1458 ...................................CCACTGTGGTGAATT 1472
| | |||||| ||
sh03241 2073 GCCTGGCTTGGCCGTGGTCTGTGGGGCCTCCTGTTCTCCCGTGGTGTTTT 2122
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbp09110 1473 CCACTAATAG.......................................C 1483
| || | |
sh03241 2123 GCGCTTCCTGCCTGTCGCTTTGACAACGTCGCGCTGTTGCTGTGGCACCC 2172
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mbp09110 1484 AGGGTCACCAC.GGTAGTAAATGCCCCCACCAGCAAGGTCCCCACTGTAG 1532
| |||||||| | | ||| || || |||||| |||| |
sh03241 2173 TGTGTCACCACATACCGGAGATGGTGCCCTATGCCCCGTCCCCCCTGTGG 2222
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mbp09110 1533 TG.....................................AGTGCCACAAA 1545
|| ||| | ||
sh03241 2223 TGTCCCGGTGACGGTGCCCTATGCCCCGTCCCCTCCGCTGGTGTCCCAGT 2272
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mbp09110 1546 TGGCAGGGTGCCCACTGTGGTG......................ACTGCC 1573
|| || ||| |||||| | | |
sh03241 2273 ATGCCCTGTCCCCCTGGTGGTGTCCAGGTGAGAGCGCCCTGTGCTCCGTC 2322
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mbp09110 1574 CACACTGGTAGGGTCCCTGCTGTGATGAATACCTCTGCCAGCAAAGTCTC 1623
| | | ||| | | | | |||| || |
sh03241 2323 CCCCCCGGTGGTGGTCTGGTGACGATGCCCTATGACCTGAGGGCTCTGGT 2372
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mbp09110 1624 TCCTGTTGTGGATGCCCCTGCCCAGGAGAGCAGCCGGGAGCAAGCATTAA 1673
||| | | | || | | | || || ||| || ||
sh03241 2373 GCCTCCTAGGCTGGGAGCTCTTCCTGGGGGCTCCCTGGACCACACA.... 2418
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mbp09110 1674 GTGTCCTTAGGAAGGCCCTTCCGGCGCTGACAGGATCTGGTACCCAGGCT 1723
||||| | | ||| | | | | | ||| | || | | || |
sh03241 2419 ..GTCCTGTTTTATGGCCT.CACGTGTTTTCGGGAACAGGGAGCGAGCTT 2465
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mbp09110 1724 CCAAACAGGTCCTTCCCAGCCACTTCC....................... 1750
| ||| | | | ||| |
sh03241 2466 TCTTCTAGGCAACTGGCTGTCACCCACCAGGGGTTAGCCCCCTGGGTGAT 2515
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mbp09110 1751 .................................TCTGTCCTGGTAACCCT 1767
||| | ||||||
sh03241 2516 CATGGCCAGGCTGGGCAGGACGTGGGCTTAGGGCTTGTGAGGCCAACCCT 2565
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mbp09110 1768 TCCCAAGAATGAAGTGCCA...CAAAAAGTTCCCTCAGACAAGCTCTCAG 1814
| || | || ||| || | | | | | || | ||
sh03241 2566 GTGCCAGCTGGGAGGCCCAGGGCACTGGGATGGCCAGGCTACGCAGTGAG 2615
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mbp09110 1815 CTTTAA............................................ 1820
|| | |
sh03241 2616 CTGTCAGCTGTGCCAGGACAGACCCCAGGCTCCTGGCGGCCCTGCTTTGA 2665
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mbp09110 1821 ......................................CCACCCAGACTC 1832
|| || | |
sh03241 2666 TGCACGGCTCTGTCTCCCAACCTGGGGGCAGCCGAGTCCCCCCGCCTCGC 2715
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbp09110 1833 CTAATTTCACTATAAAGCTAGAGCCTTCAGCCCCAGTGAATGTGGGCAA. 1881
| | | || | | | | ||| | || ||| ||| | ||
sh03241 2716 CCCACTGCAGGAAACTGGCTGTCCCTGCCACCTGGGTGTGTGTAGAAAAA 2765
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbp09110 1882 .........TACCGCTGTATTTCTCCAGGCTGGCAAAAAGA......... 1913
| || || ||| || || ||| | ||
sh03241 2766 AGCTAGAGGTTCCCATGGCTTTATCGAGCTGGGCTCAGGGAACAAGCTGG 2815
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbp09110 1914 .................................................. 1914
sh03241 2816 GCTGCAAAGGGTTTTTCCAGATCCTTCTCTTTGGCTGAGTTCTCATTGTT 2865
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbp09110 1914 ........................GCCCGAGTATTTCTCCAAGGGTTGGT 1939
| || || | ||| |
sh03241 2866 AAAGCCACGCGCTGGATCCTGCAGGACCCAGGAGCCAAGAAAGCCTGCAG 2915
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbp09110 1940 AAGACCAGCGTTGGCTCCAG...GCCACAAGCAGAGGTGG.CAGGAGTAA 1985
| | |||| |||||| | || | ||| |||||| ||| |
sh03241 2916 ACGGGCAGCCGTGGCTCAGGTGTTCCCCTTGCACAGGTGGACAGAGGATC 2965
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbp09110 1986 AGGGTCCA.......................................... 1993
||||||||
sh03241 2966 AGGGTCCACGGGGCTCACCCTGCCACGTCCCCACCCATTCGGCAGAAGGG 3015
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbp09110 1994 .................................................. 1994
sh03241 3016 GAAGTTGAGGCCCAGAGGCAGGGAGAGCTTCCCCCAGGGACACACAGCAC 3065
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbp09110 1994 .................................................. 1994
sh03241 3066 AGGAGAGCCAGCTGGGAGCCCCTCCCCTGACTCCCTGCCCGGTGCTCCTG 3115
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbp09110 1994 .................................................. 1994
sh03241 3116 ATGCCCCCCGGCCGGCTGGCTGTGGGGGTGTCTGAGGGTGGAGTGGCTAT 3165
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbp09110 1994 .................................................. 1994
sh03241 3166 GGGAAGATGGGAGGGGGAGGCACAGCCACCCTTGCAGACACCCCATTCCC 3215
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbp09110 1994 ...............................................GGT 1996
|
sh03241 3216 AGCACTCCTTCCTCACACCCAGACCCCTTGCCTCCCACCCAGACATGAGC 3265
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbp09110 1997 CCCATCTCTCAGGAAGGCCAAGAGGAGGGACCAGAAGGATGGAGGGCCCG 2046
||| | ||||||||||| ||||| || || | ||||||||| ||
sh03241 3266 ACCAGCCTCCAGGAAGGCCAGGAGGACGGGCCGGCAGGATGGAGAGCGAA 3315
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbp09110 2047 GCTGAAGCCTGTGGATAAGAAAACCCCTGCTGGGAGGTCTCTGGAGCAAA 2096
|||||||| ||||| | || || ||| |||| |||| ||||| ||| |
sh03241 3316 TCTGAAGCCCGTGGACAGGAGAAGCCCAGCTGAGAGGACTCTGAAGCCCA 3365
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mbp09110 2097 AAGAGCCA...GTCCTGGCAGAGCCAAGGATAGGTGACACTTCCAGGAAA 2143
| || ||| | |||||||||||| ||| || || | |||||||
sh03241 3366 AGGAACCACGGGCCCTGGCAGAGCCGAGGGCGGGGGAGGCCCCCAGGAAG 3415
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mbp09110 2144 GCCTCTAGTAGCTCTGACTCCAGCGTCCATAT..CACCTTGACTTCTATT 2191
| ||| | |||| || || ||||| || |||| |||| | |
sh03241 3416 GTCTCAGGCAGCTTTGCTGGGAGTGTCCACATCACACCCTGACCCCCGTG 3465
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbp09110 2192 CAGCACAAGAGGAAACCATGCCCTGCTGGTTCCGGGCCCAGTCCTGCAGC 2241
|| | |||| ||| |||| || | | || ||||| | ||||
sh03241 3466 AGGCCTGACAGGACCCCACGCCCAGCCAGCCCAGGACCCAGCCTCCCAGC 3515
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbp09110 2242 CCTCTCTCCTTCTCCATCACACCGCAAGAAACTAGCTGTCCCTCCCAGCC 2291
| || || || ||| | | ||||| || ||| || |||||| ||||||
sh03241 3516 CAGGTCCCCCTCCCCACCCCGCCGCAGGAGACTGGCCGTCCCTGCCAGCC 3565
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbp09110 2292 TTGATGTTTCAGCTGATTGGCTCCAGCCAGAGCCCAAGAAGCAGGAAGAT 2341
| || |||| | | ||||| | ||| |||||| |||||||
sh03241 3566 TCGACGTTTGTGACAACTGGCTTCGGCCGGAGCCCCCTGGCCAGGAAGCC 3615
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbp09110 2342 GGGACCAGGAGCTGTAAGGAGGAGAAG........TCACCCACCAGGTGG 2383
| |||||| ||||||||| || ||||| | ||
sh03241 3616 CGAGTGCAGAGCTGGAAGGAGGAGGAGAAGAAACCTCACCTTCAGGGCAA 3665
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbp09110 2384 TCAAGAGAGAGGTCTGCAGTCCTGGACAGTGGCCTTGCTCCACCTGGTGA 2433
| || |||| || || || || || || ||||| ||||| ||
sh03241 3666 ACCAGGGAGACCCTTG..TCCCCGGCCAATGTCCCTGCTCTGCCTGGCGA 3713
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbp09110 2434 AGCTGTCACTTCCCCAGTCAGGCTCCACCCCGACTATATTCCCCAGGAGG 2483
| || || |||||||||||||| ||||||||||| | ||| |||||
sh03241 3714 GACGGTGACCTCCCCAGTCAGGCTGCACCCCGACTACCTCTCCCCGGAGG 3763
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbp09110 2484 AGCTGCAGAGGCAGCTGCAGGACATTGAGAGCCAACTGGACGCCCTGGAG 2533
|| | |||||||||||||||||||| ||||| | |||||||||||||||
sh03241 3764 AGATACAGAGGCAGCTGCAGGACATCGAGAGGCGGCTGGACGCCCTGGAG 3813
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbp09110 2534 CTCAGGGGTGTTGAGTTGGAGAAGCGGCTGCGGGCAGCTGAGGGAGATGC 2583
||| | || || ||| |||||||||| |||||||| || ||||||||||
sh03241 3814 CTCCGCGGCGTGGAGCTGGAGAAGCGACTGCGGGCGGCCGAGGGAGATGA 3863
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbp09110 2584 TTCTGAGGATAGCCTCATGGTGGACTGGTTCCGGCTTATTCATGAGAAGC 2633
||||||||||||||||||||||||||||| |||| ||||| |||||||
sh03241 3864 CGCTGAGGATAGCCTCATGGTGGACTGGTTCTGGCTCATTCACGAGAAGC 3913
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbp09110 2634 AGCTACTGTTGAGGCTGGAATCGGAACTCATGTACAAGTCCAAGGACCAG 2683
|||| ||| |||| | ||| || || || |||||||||||||||| ||||
sh03241 3914 AGCTTCTGCTGAGACAGGAGTCAGAGCTGATGTACAAGTCCAAGGCCCAG 3963
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbp09110 2684 CGCCTGGAGGAGCAGCAGCTGGACCTCCAGGGTGAGCTGCGCAGGCTGAT 2733
|| ||||||||||||||||||||| || |||| ||||||||| |||| ||
sh03241 3964 CGTCTGGAGGAGCAGCAGCTGGACATCGAGGGCGAGCTGCGCCGGCTCAT 4013
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbp09110 2734 GGACAAGCCAGAGGGTCTGAAGTCCCCCCAGGACCGCCAGCGGGAGCAGG 2783
|| |||||| |||| ||||||||| | ||||| || | |||||||||||
sh03241 4014 GGCCAAGCCCGAGGCTCTGAAGTCACTGCAGGAGCGGCGGCGGGAGCAGG 4063
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbp09110 2784 AGCTGCTGAGCCAATACGTGAACACCGTGAATGACCGAAGTGACATCGTT 2833
|||||||| || ||||||| ||||||||| ||||| |||||||||||
sh03241 4064 AGCTGCTGGAGCAGTACGTGAGCACCGTGAACGACCGCAGTGACATCGTG 4113
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbp09110 2834 GACTTCCTGGATGAGGATCGGCTCCGGGAACAGGAAGAGGACCAAATGCT 2883
|||| ||||| ||||| |||||||||||||| || ||||| || |||||
sh03241 4114 GACTCGCTGGACGAGGACCGGCTCCGGGAACAAGAGGAGGATCAGATGCT 4163
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mbp09110 2884 GGAGAATATGATCCAGAA................................ 2901
| | | ||||| ||||
sh03241 4164 GCGGGACATGATTGAGAAGCTGGGTGACTGGGCCGGGGATGCTGAGGGCT 4213
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mbp09110 2902 .................................................. 2902
sh03241 4214 GGGCTGGCTGGCTGGGTGGGCCGGGGATGCTGAGTGCTGGGCTGGCTGGC 4263
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mbp09110 2902 .................................................. 2902
sh03241 4264 TGGGTGGACCGGGCCTCCAGCTGGGGGTGGGGGGGGGGCGGGTATCGGGT 4313
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mbp09110 2902 .................................................. 2902
sh03241 4314 CCCCCCCTCAGCCTTGGTGACAGGACAGGCAGGTTCACCCTGAGGGTGAG 4363
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mbp09110 2902 .................................................. 2902
sh03241 4364 AGCTCCCTCCCGCCCCTAAGAGAGCCAGGGGCAGCTGGTGACCGTGTGGT 4413
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mbp09110 2902 .................................................. 2902
sh03241 4414 CATGGTGGGGACCAGCCCTCCGGGGCACCCAGTCGGGGCAGGTTCTCACG 4463
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mbp09110 2902 .................................................. 2902
sh03241 4464 TGGGAGGGCACAGGGCTTCCTGCAGGCTCGGAGGCCCAGGGCGGATTGTG 4513
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mbp09110 2902 .................................................. 2902
sh03241 4514 GCCAGTGGAAGGGAAGGATGTTTCTGGCAGGGGGACTTGTGTGGGCCACG 4563
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mbp09110 2902 ..............................................CCTG 2905
|||
sh03241 4564 GCTGTGCGGCTGCGGCGTTGAGCACGGCCTCACTGTCCACCTGTCCCCTA 4613
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mbp09110 2906 GGCCTCCAGAGAAAGAAGTCCAAGTCCTTCTTGTCCAAGATCTGGTCCTC 2955
||||||||||| ||||||||||||| | |||||||||||||||||| |
sh03241 4614 GGCCTCCAGAGGAAGAAGTCCAAGTTCCGCTTGTCCAAGATCTGGTCACC 4663
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mbp09110 2956 GAAGAGCAAAAGCGG................................... 2970
|| ||||||||| |
sh03241 4664 AAAAAGCAAAAGCAGCCCCTCCCAGTAGTAGCCAGTAGGGCCGTGGGCTC 4713
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mbp09110 2971 .................................................. 2971
sh03241 4714 GGCCCGGACCTGGCATCCGGACTTGGACTCGGGGCCATGGGCTTGGCCCG 4763
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mbp09110 2971 .................................................. 2971
sh03241 4764 GACCCGGAACCCGGACTTGTACTCGGGGCCGTGGGCTCGGCCCGGACCCG 4813
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mbp09110 2971 .................................................. 2971
sh03241 4814 GCATTCGGACTTGGACTCGGGAAGGGCCTCCTGTCCCTACAAGGGGCATG 4863
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mbp09110 2971 .................................................. 2971
sh03241 4864 TGGACAGCAGGGACCTGCGCTACCGTCTGTGGTCTCAATAAAGAAACCGA 4913
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mbp09110 2971 ...............................................GCA 2973
|
sh03241 4914 CCACATGGCCCCGGACTCCTACGTGCCTCCGTGTTTGCCTCGGTGCCCCT 4963
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mbp09110 2974 GGCCTGAGCTGCACGTGGCTG............................. 2994
|| | | | |||| || |||
sh03241 4964 GGGCGGCCCCGCACCTGCCTGGGGTCTCGCCTGCCTCCCAGCTCTTGCCT 5013
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mbp09110 2995 .................................................. 2995
sh03241 5014 GCAGGACGGACGTGCTCTGTGGCCTCGGGCAGGAGCCGACCCTCTCAGGG 5063
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mbp09110 2995 .................................................. 2995
sh03241 5064 CCTGGCCCTCGAAGGTGTTTCCCCCCGGGCCGGCCTGCCGTGACGATCAC 5113
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mbp09110 2995 .................................................. 2995
sh03241 5114 AGCCCTGCCGTCTCAGGTCACGGTTTTGGATTCTGCGCTAACGAGGTCTC 5163
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mbp09110 2995 .................................................. 2995
sh03241 5164 CCAGGTGGGCTGGAAACACTGATGAAGACGGATAGAAAAAACACCAGCCC 5213
5251 ----+----*----+----*----+----*----+-- 5287
mbp09110 2995 ..................................... 2995
sh03241 5214 ACCGGATTATTAATAAAGATAATCACACACACCCCTT 5250