FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1695.ptfa, 1294 aa vs ./tmplib.26680 library 1767723 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.9103+/-0.00774; mu= -2.5840+/- 0.514 mean_var=343.2271+/-83.257, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.0692 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4062 ( 1285 res) mbg09432 (1285) 448 59 4.7e-09 mKIAA2014 ( 1045 res) mpm02193 (1045) 338 48 8.3e-06 >>mKIAA4062 ( 1285 res) mbg09432 (1285 aa) initn: 175 init1: 95 opt: 448 Z-score: 254.9 bits: 59.4 E(): 4.7e-09 Smith-Waterman score: 448; 24.078% identity (26.241% ungapped) in 461 aa overlap (714-1158:748-1186) 690 700 710 720 730 740 mKIAA1 RELRIQDMDFTDLGEEDDIDVLDVDLGHREAPG-PPPPPLLDSVPPPPVPGNLLASPVFN ::: ::::: . :::: .. :.::. mKIAA4 PPLPGSVGVPPPPPLPGGPGLPPPPPPFPGAPGIPPPPPGMGVPPPPPFGFGVPAAPVLP 720 730 740 750 760 770 750 760 770 780 790 mKIAA1 ---TPQGLGWSQVPRGQPAFTK---KKKTIRLFWNEVRPFEWPSKNNRRCREFLWSKLE- ::. . .: .: ..: . . ::..: :..: . :..:: mKIAA4 FGLTPKKVYKPEVQLRRPNWSKFVAEDLSQDCFWTKV-------KEDRFENNELFAKLTL 780 790 800 810 820 830 800 810 820 830 840 850 mKIAA1 --PIKVDTSRLEHLFESKSKELSVTKKTAADGKRQEIIVLDSKRSNAINIGL-TVLPPPR .. ::. . :..: . ::.. : .:. ::::: .. ..: : . : . mKIAA4 AFSAQTKTSKAK-----KDQEGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSFRMPYQ 840 850 860 870 880 860 870 880 890 900 910 mKIAA1 TIKIAILNFDEYALNKEGIEKILTMIPTEEEKQKIQEAQLANPEVPLGSAEQFLLTLSSI :: .::. .: .:.. :.... ..: :. . ..: : . :. .::: ...... mKIAA4 EIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSE--LKEEYDDLAESEQFGVVMGTV 890 900 910 920 930 940 920 930 940 950 960 970 mKIAA1 SELSARLHLWAFKMDYETTEKEVAEPLLDLKEGIDQLENNKTLGFILSTLLAIGNFLN-G .: ::. ::... ... .... . ..:....... .: : .::..: : mKIAA4 PRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAG 950 960 970 980 990 1000 980 990 1000 1010 1020 mKIAA1 T-NAKAF--ELSYLEKVPEVKDTVHKQSLLHHVCTMVVENFPDSSDLYSEIGAITRSAKV . :: :: ..:.: :. ..:.. .:..::: . . .. :. . .:.. . ....: mKIAA4 SRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRV 1010 1020 1030 1040 1050 1060 1030 1040 1050 1060 1070 1080 mKIAA1 DFDQLQDNLCQMERR-CKASWDHLKAIAKHEMKPVLKQRMSEFLKDCAERIIILKIVHRR . ..:: .: ::... . : . : . : . ..:. :.:: :. :...: mKIAA4 SAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSN 1070 1080 1090 1100 1110 1120 1090 1100 1110 1120 1130 1140 mKIAA1 IINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYRTTRERVLQQKQKRANHRERNK . . .. . .. : .......: . .: :. ......::: . .:. . mKIAA4 METLYKELGDYFVFDP---KKLSVEEFFMDLHNF----RNMFLQAVKENQKRRETEEKMR 1130 1140 1150 1160 1170 1150 1160 1170 1180 1190 1200 mKIAA1 TRGKMITDSGKFSGSSPAAPSQPQGLSYAEDAAEHENMKAVLKTSSPALEDATPVLGVRT :.:. .... mKIAA4 -RAKLAKEKAEKERLEKQQKREQLIDMNAEGDETGVMDSLLEALQSGAAFRRKRGPRQVN 1180 1190 1200 1210 1220 1230 >>mKIAA2014 ( 1045 res) mpm02193 (1045 aa) initn: 199 init1: 87 opt: 338 Z-score: 196.7 bits: 48.3 E(): 8.3e-06 Smith-Waterman score: 391; 21.965% identity (24.411% ungapped) in 519 aa overlap (717-1215:545-1031) 690 700 710 720 730 740 mKIAA1 RIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPPPPLLDSVPP-PPVPGNLLASPVFNTPQ :::::: :. :: ::.:: :.: mKIAA2 IPPSDLDLLAPAPPTEETLPLPPPPAPPLPPPPPPLPDKCPPAPPLPG---AAPSVVLTV 520 530 540 550 560 570 750 760 770 780 790 800 mKIAA1 GLGWSQVPRGQPAFTKKKKTIRLFWNEVRPFEWPSKNNRRCREFLWSKLEPIKV----DT ::. .. . : :: . . :.: . . . ..:.:. :. : mKIAA2 GLSAIRIKK--PIKTKFRLPV---------FNWTALKPNQINGTVFSELDDEKILEDLDL 580 590 600 610 620 810 820 830 840 850 mKIAA1 SRLEHLFESKSK----ELSVTKKTAADGKRQEIIVLDSKRSNAINIGLTVLPPPRT---I .:.:.::..:.. .: .:. .:. ... .:...: : :...:. :. : mKIAA2 DRFEELFKTKAQGPALDLICSKNKTAQKAASKVTLLEANR--AKNLAITLRKAGRSAEEI 630 640 650 660 670 860 870 880 890 900 910 mKIAA1 KIAILNFDEYALNKEGIEKILTMIPTEEEKQKI-QEAQLANPEVPLGSAEQFLLTLSSIS :: .:: .: . .: .. ..::: : . . : . .: :.. ..:.: .:.. mKIAA2 CRAIHTFDLQTLPVDFVECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSKVE 680 690 700 710 720 730 920 930 940 950 960 970 mKIAA1 ELSARLHLWAFKMDYETTEKEVAEPLLDLKEGIDQLENNKTLGFILSTLLAIGNFLNGTN .:. :. :: ... . . .. : . . ...... : .: .::.::..:... mKIAA2 RLTQRMAGMAFLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSK 740 750 760 770 780 790 980 990 1000 1010 1020 1030 mKIAA1 AKA---FELSYLEKVPEVKDTVHKQSLLHHVCTMVVENFPDSSDLYSEIGAITRSAKVDF : :.:. :. . ..:.: .:..::: . : :..:. .....:. . ..: :.. mKIAA2 RGAVYGFKLQSLDLLLDTKSTDRKMTLLHFIALTVKEKYPELANFWQELHFVEKAAAVSL 800 810 820 830 840 850 1040 1050 1060 1070 1080 1090 mKIAA1 DQLQDNLCQMERRCKASWDHLKAIAKHEMKPVLKQRMSEFLKDCAERIIILKIVHRRIIN ... .. .. : . . ..: . .. . .::. .. :. . . mKIAA2 ENVLLDVKELGRGME--------LIRRECSIHDNSVLRNFLSTNEGKLDKLQRDAKTAEE 860 870 880 890 900 910 1100 1110 1120 1130 1140 1150 mKIAA1 RFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYRTTRERVLQQKQKRANHRERNKTRG ... . ..:. : . . . : .. .: :. .... .:... ::. mKIAA2 AYNAVVRYFGESP---KTTPPSVFFPVFVRFIRSYKEAEQENEARKKQEEVMREK----- 920 930 940 950 960 1160 1170 1180 1190 1200 mKIAA1 KMITDSGKFSGSSPAAPS--QPQGLSYAEDAAEHENMKAVLKTSSPALEDATPVL-GVRT .. .. :.....:. . : : : . .. . : . .. ..:: :: .: mKIAA2 QLAQEAKKLDAKTPSQRNKWQQQELIAELRRRQAKEHRPVYEGKDGTIEDIITVLKSVPF 970 980 990 1000 1010 1020 1210 1220 1230 1240 1250 1260 mKIAA1 RSR-ASRGSTSSWTMGTEESPSVTDDAADEIMDRIVKSATQVPSQRVVPRERKRSRANRK .: :.::: mKIAA2 TARTAKRGSRFFCDAAHHDESNC 1030 1040 1294 residues in 1 query sequences 1767723 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:51:05 2006 done: Mon Mar 27 10:51:06 2006 Scan time: 1.210 Display time: 0.140 Function used was FASTA [version 3.4t11 Apr 17, 2002]