# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbp04321.fasta.nr -Q ../query/mKIAA1051.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1051, 549 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915388 sequences Expectation_n fit: rho(ln(x))= 6.2334+/-0.000204; mu= 8.5298+/- 0.011 mean_var=130.8248+/-25.360, 0's: 38 Z-trim: 49 B-trim: 423 in 2/65 Lambda= 0.112132 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|31376257|dbj|BAC77244.1| paternally expressed 1 ( 376) 2518 418.5 1.7e-114 gi|172045711|sp|Q7TN75.2|PEG10_MOUSE RecName: Full ( 958) 2518 418.9 3.4e-114 gi|98985814|ref|NP_570947.2| paternally expressed (1006) 2518 418.9 3.5e-114 gi|109473089|ref|XP_001053454.1| PREDICTED: simila ( 364) 1787 300.2 6.8e-79 gi|148682032|gb|EDL13979.1| mCG64208 [Mus musculus ( 444) 1731 291.2 4.1e-76 gi|11692745|gb|AAG39979.1|AF302691_1 myelin expres ( 231) 1464 247.8 2.6e-63 gi|111117522|gb|ABH05669.1| paternal expression 10 ( 403) 1334 227.0 8.3e-57 gi|157954422|ref|NP_001103285.1| paternally expres ( 405) 1334 227.0 8.4e-57 gi|119597187|gb|EAW76781.1| hCG1642748, isoform CR ( 401) 1331 226.5 1.2e-56 gi|187829058|ref|NP_001120696.1| paternally expres ( 758) 1334 227.2 1.3e-56 gi|187761320|ref|NP_001120682.1| paternally expres ( 788) 1334 227.3 1.3e-56 gi|108885167|gb|ABC54572.3| paternally expressed 1 ( 367) 1329 226.1 1.4e-56 gi|73976337|ref|XP_539424.2| PREDICTED: similar to ( 379) 1321 224.8 3.4e-56 gi|109069256|ref|XP_001085478.1| PREDICTED: simila ( 325) 1307 222.5 1.5e-55 gi|13810537|dbj|BAB43951.1| paternally expressed g ( 325) 1297 220.9 4.5e-55 gi|194209640|ref|XP_001915670.1| PREDICTED: patern ( 765) 1302 222.1 4.7e-55 gi|172046699|sp|Q86TG7.2|PEG10_HUMAN RecName: Full ( 708) 1295 220.9 9.8e-55 gi|7513731|pir||JE0163 myelin expression factor-3 ( 232) 1204 205.7 1.2e-50 gi|146134321|dbj|BAF57230.1| paternally expressed ( 317) 801 140.6 6.4e-31 gi|189516817|ref|XP_001922351.1| PREDICTED: simila (1357) 557 101.8 1.3e-18 gi|189533151|ref|XP_001921906.1| PREDICTED: simila (1165) 555 101.4 1.5e-18 gi|149064934|gb|EDM15010.1| rCG28175, isoform CRA_ ( 111) 536 97.3 2.5e-18 gi|149064935|gb|EDM15011.1| rCG28175, isoform CRA_ ( 279) 515 94.3 4.9e-17 gi|189532457|ref|XP_001332984.2| PREDICTED: simila ( 611) 480 89.0 4.3e-15 gi|189545900|ref|XP_001336376.2| PREDICTED: simila ( 367) 470 87.2 9.3e-15 gi|189532422|ref|XP_001346300.2| PREDICTED: simila ( 442) 471 87.4 9.5e-15 gi|189524151|ref|XP_001334879.2| PREDICTED: simila ( 368) 469 87.0 1e-14 gi|189533038|ref|XP_001342474.2| PREDICTED: simila ( 537) 471 87.5 1.1e-14 gi|189525825|ref|XP_001339792.2| PREDICTED: simila ( 548) 471 87.5 1.1e-14 gi|189528220|ref|XP_001339028.2| PREDICTED: simila ( 584) 471 87.5 1.1e-14 gi|189528143|ref|XP_001337455.2| PREDICTED: simila ( 626) 471 87.5 1.2e-14 gi|189514531|ref|XP_001345035.2| PREDICTED: simila ( 684) 471 87.6 1.3e-14 gi|125835515|ref|XP_001344921.1| PREDICTED: simila ( 375) 467 86.7 1.3e-14 gi|125847255|ref|XP_001334123.1| PREDICTED: simila ( 424) 467 86.7 1.4e-14 gi|189541209|ref|XP_001922417.1| PREDICTED: simila ( 998) 471 87.7 1.7e-14 gi|189526091|ref|XP_001920647.1| PREDICTED: simila ( 898) 470 87.5 1.7e-14 gi|189520578|ref|XP_001919397.1| PREDICTED: simila ( 363) 464 86.2 1.8e-14 gi|189526001|ref|XP_001922148.1| PREDICTED: simila ( 390) 464 86.2 1.9e-14 gi|189538030|ref|XP_001920659.1| PREDICTED: simila ( 476) 465 86.5 2e-14 gi|189521594|ref|XP_001333878.2| PREDICTED: simila (1425) 468 87.4 3e-14 gi|125843323|ref|XP_001336430.1| PREDICTED: simila ( 344) 455 84.7 4.8e-14 gi|189520130|ref|XP_001344996.2| PREDICTED: simila ( 949) 459 85.8 6.2e-14 gi|189523890|ref|XP_001345592.2| PREDICTED: simila (1244) 444 83.5 4e-13 gi|189514831|ref|XP_001345975.2| PREDICTED: simila (1074) 441 82.9 5.1e-13 gi|189521439|ref|XP_001344457.2| PREDICTED: simila (1375) 442 83.2 5.4e-13 gi|189514909|ref|XP_001337048.2| PREDICTED: simila ( 351) 433 81.1 5.7e-13 gi|189534109|ref|XP_001338771.2| PREDICTED: simila ( 310) 427 80.1 1e-12 gi|189535466|ref|XP_001921691.1| PREDICTED: simila (1454) 435 82.1 1.2e-12 gi|189518459|ref|XP_001345935.2| PREDICTED: simila ( 500) 424 79.8 2e-12 gi|189532532|ref|XP_001921242.1| PREDICTED: simila (1401) 429 81.1 2.4e-12 >>gi|31376257|dbj|BAC77244.1| paternally expressed 10 [M (376 aa) initn: 2510 init1: 2510 opt: 2518 Z-score: 2211.7 bits: 418.5 E(): 1.7e-114 Smith-Waterman score: 2518; 96.524% identity (97.861% similar) in 374 aa overlap (91-464:1-372) 70 80 90 100 110 120 mKIAA1 RVLRTKRRQPRGSQDPGLPPQGSEAPLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKS :::::::::::::::::::::::::::::: gi|313 MAAAGGSSNCPPPPPPPPPNNNNNNNTPKS 10 20 30 130 140 150 160 170 180 mKIAA1 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDD 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 DEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 DEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 RLSKEEKERRRKMNLCLYCGNGGHFADGPSATGPERIRSPPSEASTQHLQVMLQIHMPGR ::::::::::::::::::::::::::: : . . :::... gi|313 RLSKEEKERRRKMNLCLYCGNGGHFADTCPAKASKN--SPPGNSPAPL 340 350 360 370 490 500 510 520 530 540 mKIAA1 PTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMVEAIDGHPIASGPIILETHHLI >>gi|172045711|sp|Q7TN75.2|PEG10_MOUSE RecName: Full=Ret (958 aa) initn: 3190 init1: 2510 opt: 2518 Z-score: 2206.6 bits: 418.9 E(): 3.4e-114 Smith-Waterman score: 3152; 95.625% identity (95.625% similar) in 480 aa overlap (91-549:1-480) 70 80 90 100 110 120 mKIAA1 RVLRTKRRQPRGSQDPGLPPQGSEAPLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKS :::::::::::::::::::::::::::::: gi|172 MAAAGGSSNCPPPPPPPPPNNNNNNNTPKS 10 20 30 130 140 150 160 170 180 mKIAA1 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDD 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 DEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 DEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM 280 290 300 310 320 330 430 440 450 mKIAA1 RLSKEEKERRRKMNLCLYCGNGGHFAD---------------------GPSATGPERIRS ::::::::::::::::::::::::::: :::::::::::: gi|172 RLSKEEKERRRKMNLCLYCGNGGHFADTCPAKASKNSPPGKLPGPAVGGPSATGPERIRS 340 350 360 370 380 390 460 470 480 490 500 510 mKIAA1 PPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 PPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMV 400 410 420 430 440 450 520 530 540 mKIAA1 EAIDGHPIASGPIILETHHLIVDLGDHREI :::::::::::::::::::::::::::::: gi|172 EAIDGHPIASGPIILETHHLIVDLGDHREILSFDVTQSPFFPIVLGIRWLSTHDPHITWS 460 470 480 490 500 510 >>gi|98985814|ref|NP_570947.2| paternally expressed 10 i (1006 aa) initn: 3190 init1: 2510 opt: 2518 Z-score: 2206.3 bits: 418.9 E(): 3.5e-114 Smith-Waterman score: 3152; 95.625% identity (95.625% similar) in 480 aa overlap (91-549:1-480) 70 80 90 100 110 120 mKIAA1 RVLRTKRRQPRGSQDPGLPPQGSEAPLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKS :::::::::::::::::::::::::::::: gi|989 MAAAGGSSNCPPPPPPPPPNNNNNNNTPKS 10 20 30 130 140 150 160 170 180 mKIAA1 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|989 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDD 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 DEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|989 DEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|989 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|989 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|989 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM 280 290 300 310 320 330 430 440 450 mKIAA1 RLSKEEKERRRKMNLCLYCGNGGHFAD---------------------GPSATGPERIRS ::::::::::::::::::::::::::: :::::::::::: gi|989 RLSKEEKERRRKMNLCLYCGNGGHFADTCPAKASKNSPPGKLPGPAVGGPSATGPERIRS 340 350 360 370 380 390 460 470 480 490 500 510 mKIAA1 PPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|989 PPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMV 400 410 420 430 440 450 520 530 540 mKIAA1 EAIDGHPIASGPIILETHHLIVDLGDHREI :::::::::::::::::::::::::::::: gi|989 EAIDGHPIASGPIILETHHLIVDLGDHREILSFDVTQSPFFPIVLGIRWLSTHDPHITWS 460 470 480 490 500 510 >>gi|109473089|ref|XP_001053454.1| PREDICTED: similar to (364 aa) initn: 1571 init1: 1394 opt: 1787 Z-score: 1572.8 bits: 300.2 E(): 6.8e-79 Smith-Waterman score: 1913; 74.211% identity (87.105% similar) in 380 aa overlap (93-469:2-364) 70 80 90 100 110 120 mKIAA1 LRTKRRQPRGSQDPGLPPQGSEAPLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKSPG :.::::.:::::::::::.:::::.:.: gi|109 MASGGSSDCPPPPPPPPPNDNNNNNAPES-- 10 20 130 140 150 160 170 180 mKIAA1 VPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDDDE ::..:. ..:.::.:. :.:.:::::::..:::::::::::::.::::::.:::. gi|109 VPNVEE-----QEEFPEEID-FEEQMNRQFENISLLDQVELLAQSYSFLDHLDDYDDDE- 30 40 50 60 70 80 190 200 210 220 230 240 mKIAA1 DDDFDPEPDQDEL--PEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP ..:::.: .. :: :::::::::::::: : ...::: :::::::::::::.::: gi|109 ---IEPEPEQVQISVPEDSDDDDLELQGAAAAAAPALYTDDD-LEDLPEKFDGNPDLLGP 90 100 110 120 130 250 260 270 280 290 300 mKIAA1 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK :.::::.:::.:::::::::.::::::::: :::::::.:::.::.:::::::::::::: gi|109 FIYQCQMFMERSTRDFSVDRVRVCFVTSMLTGRAARWASAKLERCNYLMHNYTAFMMELK 140 150 160 170 180 190 310 320 330 340 350 360 mKIAA1 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR :::::::::::::::::::::::. .:::::::::::::::::::::.:::::::: ::: gi|109 HVFEDPQRREAAKRKIRRLRQGPSSIVDYSNAFQMIAQDLDWTEPALIDQFQEGLNDDIR 200 210 220 230 240 250 370 380 390 400 410 420 mKIAA1 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM ::::::: ::::. ::: ::::::::.:. :: : : : :. :: ..::::::::::: gi|109 AELSRQEDPKTLTDLITLCIHIERRLTRERAAPPPPPPLPLLPPPPPEADPTEPVGGARM 260 270 280 290 300 310 430 440 450 460 470 mKIAA1 RLSKEEKERRRKMNLCLYCGNGGHFADGPSATGPERI-RSPPSEASTQHLQVMLQIHMPG :::.::::::::::::::::::::::: : : . .. :: : : gi|109 RLSQEEKERRRKMNLCLYCGNGGHFAD----TCPAKASKNSPSGNSPAPL 320 330 340 350 360 480 490 500 510 520 530 mKIAA1 RPTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMVEAIDGHPIASGPIILETHHL >>gi|148682032|gb|EDL13979.1| mCG64208 [Mus musculus] (444 aa) initn: 1685 init1: 1685 opt: 1731 Z-score: 1522.7 bits: 291.2 E(): 4.1e-76 Smith-Waterman score: 2854; 90.302% identity (92.457% similar) in 464 aa overlap (1-464:1-440) 10 20 30 40 50 60 mKIAA1 PDQLRPGESSQPRRSTEPRLGLLRGLRSGAFSGPRSPSGPGRRGTPHPSWHRRGILVWNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PDQLRPGESSQPRRSTEPRLGLLRGLRSGAFSGPRSPSGPGRRGTPHPSWHRRGILVWNR 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 RVLRTKRRQPRGSQDPGLPPQGSEAPLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RVLRTKRRQPRGSQDPGLPPQGSEAPLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKS 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDD :::::::::::::::::::::::::::::::::::::::::::::::: . . gi|148 PGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQVELLAQSY---------NKN 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP .:. : : :: :.::::::::::::::::::::::::::::::::::: gi|148 QENID-------------SLDDPLQLQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGP 180 190 200 210 250 260 270 280 290 300 mKIAA1 FMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FMDQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AELSRQEAPKTLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARM 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 RLSKEEKERRRKMNLCLYCGNGGHFADGPSATGPERIRSPPSEASTQHLQVMLQIHMPGR ::::::::::::::::::::::::::: : . . :::... gi|148 RLSKEEKERRRKMNLCLYCGNGGHFADTCPAKASKN--SPPGNSPAPL 400 410 420 430 440 490 500 510 520 530 540 mKIAA1 PTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMVEAIDGHPIASGPIILETHHLI >>gi|11692745|gb|AAG39979.1|AF302691_1 myelin expression (231 aa) initn: 1456 init1: 1456 opt: 1464 Z-score: 1292.8 bits: 247.8 E(): 2.6e-63 Smith-Waterman score: 1464; 94.323% identity (96.507% similar) in 229 aa overlap (236-464:1-227) 210 220 230 240 250 260 mKIAA1 LQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGPFMYQCQLFMEKSTRDFSVDRIRVCF :::::::::::::::::::::::::::::: gi|116 DMLGPFMYQCQLFMEKSTRDFSVDRIRVCF 10 20 30 270 280 290 300 310 320 mKIAA1 VTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELKHVFEDPQRREAAKRKIRRLRQGPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELKHVFEDPQRREAAKRKIRRLRQGPGP 40 50 60 70 80 90 330 340 350 360 370 380 mKIAA1 VVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPKTLAALITACIHIERR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPKTLAALITACIHIERR 100 110 120 130 140 150 390 400 410 420 430 440 mKIAA1 LARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARMRLSKEEKERRRKMNLCLYCGNGGHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARMRLSKEEKERRRKMNLCLYCGNGGHF 160 170 180 190 200 210 450 460 470 480 490 500 mKIAA1 ADGPSATGPERIRSPPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGASGNFIDQDFVIQ :: : . . :::... gi|116 ADTCPAKASKN--SPPGNSPAPL 220 230 >>gi|111117522|gb|ABH05669.1| paternal expression 10 [Su (403 aa) initn: 1676 init1: 1008 opt: 1334 Z-score: 1176.2 bits: 227.0 E(): 8.3e-57 Smith-Waterman score: 1548; 60.546% identity (76.427% similar) in 403 aa overlap (59-447:3-384) 30 40 50 60 70 80 mKIAA1 GAFSGPRSPSGPGRRGTPHPSWHRRGILVWNRRVLRTKRRQP-RGSQDPGLPPQGSEA-- :...:.::::. ::.:.::: :. ::: gi|111 MRNKKLLKTKRRKGGRGGQEPGLHPHRSEATP 10 20 30 90 100 110 120 130 mKIAA1 ---PLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKSPGVPDAEDDD---ERRHDELPE : : ... . .:::::::::::. ...:. . : .. . :::.:.: : gi|111 GRSPPTPSLTLG---PDCPPPPPPPPPNDPSSSNSSSPCGGQRGQYNPNLAERRRDDLSE 40 50 60 70 80 140 150 160 170 180 190 mKIAA1 DINNFDEDMNRQFE-NMNLLDQVELLAQSYSLLDHLDDFDDDDEDDDFDPEPDQDELPEY .:::. : . .: : : :: .::. :.. . : .. .: :...: gi|111 EINNLREKVMKQSEENNNLQNQVQKLTEENTSLR-----------EQVEPAPEEEE---- 90 100 110 120 130 200 210 220 230 240 250 mKIAA1 SDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGPFMYQCQLFMEKSTRDFSV ::.:: ::::: : ...: :::::::::::: : ::: ::::::::::::::: gi|111 ---DDIELCGAAAAAAPATPIEEECAEDLPEKFDGNPDALVPFMAQCQLFMEKSTRDFSV 140 150 160 170 180 190 260 270 280 290 300 310 mKIAA1 DRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELKHVFEDPQRREAAKRKIRR ::.:::::.::. :::::::.:::.: :::::: ::: :.::::::::::::::::::: gi|111 DRVRVCFVASMMTGRAARWASAKLERSHYLMHNYPAFMTEMKHVFEDPQRREAAKRKIRR 200 210 220 230 240 250 320 330 340 350 360 370 mKIAA1 LRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPKTLAALITA :::: : :.:::::::::::::::.::::.::..:::. :.::::: :. :.:.::: gi|111 LRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQAELSRLEVAKSLSALIGQ 260 270 280 290 300 310 380 390 400 410 420 430 mKIAA1 CIHIERRLARDAAA-KPDPSPRALVMPPNS---QTDPTEPVGGARMRLSKEEKERRRKMN :::::::::: ::: :: ::::::: : :.:::::::::::::..::::::::.: gi|111 CIHIERRLARAAAARKPRSPPRALVMPHVSNHHQVDPTEPVGGARMRLTQEEKERRRKLN 320 330 340 350 360 370 440 450 460 470 480 490 mKIAA1 LCLYCGNGGHFADGPSATGPERIRSPPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGAS ::::::::::.:: gi|111 LCLYCGNGGHYADNCPAKASKASPAGNSPAPL 380 390 400 >>gi|157954422|ref|NP_001103285.1| paternally expressed (405 aa) initn: 1733 init1: 1010 opt: 1334 Z-score: 1176.1 bits: 227.0 E(): 8.4e-57 Smith-Waterman score: 1512; 59.701% identity (75.373% similar) in 402 aa overlap (59-447:3-386) 30 40 50 60 70 80 mKIAA1 GAFSGPRSPSGPGRRGTPHPSWHRRGILVWNRRVLRTKRRQP-RGSQDPGLPPQGSEAPL :...:.:.::. ::.:: :: . ::: gi|157 MRNKKLLKTRRRKGGRGGQDTGLHCHRSEATT 10 20 30 90 100 110 120 130 140 mKIAA1 ---TAAMAAAGGSSNCPPPPPPPPPNNNNN-NNTPKSPGVPDAEDD-DERRHDELPEDIN . . . .:::::::::::. .. .:.: : . . . :::...: :.:: gi|157 RGRSPPTPTITLGPDCPPPPPPPPPNDPSSPSNSPCSSQRGQYNPNLGERRREDLSEEIN 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 NFDEDMNRQFE-NMNLLDQVELLAQSYSLLDHLDDFDDDDEDDDFDPEPDQDELPEYSDD :. : . .: : : :: .::. :.. . : .. .: :...: gi|157 NLREKVMKQSEENNNLQNQVQKLTEENTTLR-----------EQVEPTPEEEE------- 100 110 120 130 210 220 230 240 250 260 mKIAA1 DDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGPFMYQCQLFMEKSTRDFSVDRI ::.:: ::::: : ...: :::::::::::::: ::: :::::::::::::::::. gi|157 DDIELCGAAAAAAPASPIEEECPEDLPEKFDGNPDMLVPFMSQCQLFMEKSTRDFSVDRV 140 150 160 170 180 190 270 280 290 300 310 320 mKIAA1 RVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELKHVFEDPQRREAAKRKIRRLRQ ::::::::. :::::::.:::.: :::::: ::: :.:::::::::::::::::::::: gi|157 RVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMTEMKHVFEDPQRREAAKRKIRRLRQ 200 210 220 230 240 250 330 340 350 360 370 380 mKIAA1 GPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPKTLAALITACIH : : :::::::::::::::::.::::.::..:::. :.:::.: :. :.:.::: ::: gi|157 GMGSVVDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQAELARLEVAKSLSALIGQCIH 260 270 280 290 300 310 390 400 410 420 430 mKIAA1 IERRLARDAAA-KPDPSPRALVMPP-----NSQTDPTEPVGGARMRLSKEEKERRRKMNL ::::::: ::. :: ::::: : : :.:::::::::::::..::::::::.:: gi|157 IERRLARAAATRKPRSPPRALVAPHVNNHHNHQVDPTEPVGGARMRLTQEEKERRRKLNL 320 330 340 350 360 370 440 450 460 470 480 490 mKIAA1 CLYCGNGGHFADGPSATGPERIRSPPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGASG :::::::::.:: gi|157 CLYCGNGGHYADNCPAKASKASPAGNSPAPL 380 390 400 >>gi|119597187|gb|EAW76781.1| hCG1642748, isoform CRA_b (401 aa) initn: 1678 init1: 1017 opt: 1331 Z-score: 1173.6 bits: 226.5 E(): 1.2e-56 Smith-Waterman score: 1598; 60.757% identity (75.414% similar) in 423 aa overlap (59-469:3-401) 30 40 50 60 70 80 mKIAA1 GAFSGPRSPSGPGRRGTPHPSWHRRGILVWNRRVLRTK-RRQPRGSQDPGLPPQGSEAPL :.:::.:: ::. ::.::::: :. ::: gi|119 MRNKRVLKTKKRRSGRGGQDPGLHPHRSEATA 10 20 30 90 100 110 120 130 140 mKIAA1 --TAAMAAAGGSSNCPPPPPPPPPNNNNNNNTP----KSPGVPDAEDDDERRHDELPEDI . .. . .:::::::::::::::::. :: ::. :::.::: :.: gi|119 GRSPPTPTVTLGPDCPPPPPPPPPNNNNNNNSKHTGHKSACVPNMT---ERRRDELSEEI 40 50 60 70 80 150 160 170 180 190 200 mKIAA1 NNFDEDMNRQFE-NMNLLDQVELLAQSYSLLDHLDDFDDDDEDDDFDPEPDQDELPEYSD ::. : . .: : : :: .::. :.. . : .. .: :. :: gi|119 NNLREKVMKQSEENNNLQSQVQKLTEENTTLR-----------EQVEPTPE-DE------ 90 100 110 120 130 210 220 230 240 250 260 mKIAA1 DDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGPFMYQCQLFMEKSTRDFSVDR :::.::.::::: : ...: ::::::::::::::.::: :::.::::::::::::: gi|119 DDDIELRGAAAAAAPPPPIEEECPEDLPEKFDGNPDMLAPFMAQCQIFMEKSTRDFSVDR 140 150 160 170 180 190 270 280 290 300 310 320 mKIAA1 IRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELKHVFEDPQRREAAKRKIRRLR .::::::::. :::::::.:::.: :::::: :::::.:::::::::::.::::::::: gi|119 VRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEMKHVFEDPQRREVAKRKIRRLR 200 210 220 230 240 250 330 340 350 360 370 380 mKIAA1 QGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPKTLAALITACI :: : :.:::::::::::::::.::::.::..:::. :. :::. :. :.:.::: :: gi|119 QGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQEELSHLEVAKSLSALIGQCI 260 270 280 290 300 310 390 400 410 420 430 mKIAA1 HIERRLARDAAA-KPDPSPRALVMP---PNSQTDPTEPVGGARMRLSKEEKERRRKMNLC :::::::: ::: :: :::::.: . :.:::::::::::::..::::::::.::: gi|119 HIERRLARAAAARKPRSPPRALVLPHIASHHQVDPTEPVGGARMRLTQEEKERRRKLNLC 320 330 340 350 360 370 440 450 460 470 480 490 mKIAA1 LYCGNGGHFADGPSATGPERIRSPPSEASTQHLQVMLQIHMPGRPTLFVRAMIDSGASGN ::::.:::.::. : . .: :. : : gi|119 LYCGTGGHYADNCPAKAS---KSSPAGNSPAPL 380 390 400 500 510 520 530 540 mKIAA1 FIDQDFVIQNAIPLRIKDWPVMVEAIDGHPIASGPIILETHHLIVDLGDHREI >>gi|187829058|ref|NP_001120696.1| paternally expressed (758 aa) initn: 2228 init1: 1008 opt: 1334 Z-score: 1172.7 bits: 227.2 E(): 1.3e-56 Smith-Waterman score: 2056; 61.480% identity (76.471% similar) in 527 aa overlap (59-549:3-508) 30 40 50 60 70 80 mKIAA1 GAFSGPRSPSGPGRRGTPHPSWHRRGILVWNRRVLRTKRRQP-RGSQDPGLPPQGSEA-- :...:.::::. ::.:.::: :. ::: gi|187 MRNKKLLKTKRRKGGRGGQEPGLHPHRSEATP 10 20 30 90 100 110 120 130 mKIAA1 ---PLTAAMAAAGGSSNCPPPPPPPPPNNNNNNNTPKSPGVPDAEDDD---ERRHDELPE : : ... . .:::::::::::. ...:. . : .. . :::.:.: : gi|187 GRSPPTPSLTLG---PDCPPPPPPPPPNDPSSSNSSSPCGGQRGQYNPNLAERRRDDLSE 40 50 60 70 80 140 150 160 170 180 190 mKIAA1 DINNFDEDMNRQFE-NMNLLDQVELLAQSYSLLDHLDDFDDDDEDDDFDPEPDQDELPEY .:::. : . .: : : :: .::. :.. . : .. .: :...: gi|187 EINNLREKVMKQSEENNNLQNQVQKLTEENTSLR-----------EQVEPAPEEEE---- 90 100 110 120 130 200 210 220 230 240 250 mKIAA1 SDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGPFMYQCQLFMEKSTRDFSV ::.:: ::::: : ...: :::::::::::: : ::: ::::::::::::::: gi|187 ---DDIELCGAAAAAAPATPIEEECAEDLPEKFDGNPDALVPFMAQCQLFMEKSTRDFSV 140 150 160 170 180 190 260 270 280 290 300 310 mKIAA1 DRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELKHVFEDPQRREAAKRKIRR ::.:::::.::. :::::::.:::.: :::::: ::: :.::::::::::::::::::: gi|187 DRVRVCFVASMMTGRAARWASAKLERSHYLMHNYPAFMTEMKHVFEDPQRREAAKRKIRR 200 210 220 230 240 250 320 330 340 350 360 370 mKIAA1 LRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPKTLAALITA :::: : :.:::::::::::::::.::::.::..:::. :.::::: :. :.:.::: gi|187 LRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQAELSRLEVAKSLSALIGQ 260 270 280 290 300 310 380 390 400 410 420 430 mKIAA1 CIHIERRLARDAAA-KPDPSPRALVMPPNS---QTDPTEPVGGARMRLSKEEKERRRKMN :::::::::: ::: :: ::::::: : :.:::::::::::::..::::::::.: gi|187 CIHIERRLARAAAARKPRSPPRALVMPHVSNHHQVDPTEPVGGARMRLTQEEKERRRKLN 320 330 340 350 360 370 440 450 460 470 mKIAA1 LCLYCGNGGHFAD---------------------GPSATGPERIRSPPSEA-STQHLQVM ::::::::::.:: :::::::: :::: ..: :. ::::: gi|187 LCLYCGNGGHYADNCPAKASKASPAGKLPGPAVEGPSATGPELIRSPQDDAASSPHLQVM 380 390 400 410 420 430 480 490 500 510 520 530 mKIAA1 LQIHMPGRPTLFVRAMIDSGASGNFIDQDFVIQNAIPLRIKDWPVMVEAIDGHPIASGPI ::::.::: ::::::::::::::::::...: ::.::::.::::..::::::.::::::. gi|187 LQIHLPGRHTLFVRAMIDSGASGNFIDHEYVAQNGIPLRVKDWPILVEAIDGRPIASGPV 440 450 460 470 480 490 540 mKIAA1 ILETHHLIVDLGDHREI . ::: ::::::::::. gi|187 VHETHDLIVDLGDHREVLSFDVIQSPFFPIVLGVRWLSTHDPNITWSTRSIVFDSEYCRY 500 510 520 530 540 550 549 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 10:32:15 2009 done: Thu Mar 12 10:39:31 2009 Total Scan time: 972.980 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]