# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbp03304.fasta.nr -Q ../query/mKIAA1570.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1570, 367 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918854 sequences Expectation_n fit: rho(ln(x))= 5.7611+/-0.000189; mu= 7.0876+/- 0.011 mean_var=98.2399+/-18.818, 0's: 38 Z-trim: 47 B-trim: 86 in 1/65 Lambda= 0.129399 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|126540736|emb|CAM45954.1| cancer susceptibility (2119) 2386 456.3 2.8e-125 gi|109468665|ref|XP_230465.4| PREDICTED: similar t (1991) 2189 419.5 3.1e-114 gi|12857151|dbj|BAB30909.1| unnamed protein produc ( 331) 2151 411.7 1.1e-112 gi|74000114|ref|XP_535434.2| PREDICTED: similar to (2309) 1916 368.6 7.6e-99 gi|149692474|ref|XP_001501147.1| PREDICTED: cancer (2292) 1886 363.0 3.7e-97 gi|18308012|gb|AAL67803.1|AF461041_1 AF15q14 isofo (2316) 1876 361.1 1.3e-96 gi|74048554|ref|NP_653091.2| cancer susceptibility (2316) 1876 361.1 1.3e-96 gi|21280444|gb|AAM45143.1|AF173994_1 AF15q14 [Homo (2342) 1876 361.1 1.4e-96 gi|74048514|ref|NP_733468.2| cancer susceptibility (2342) 1876 361.1 1.4e-96 gi|223590239|sp|Q8NG31.3|CASC5_HUMAN RecName: Full (2342) 1876 361.1 1.4e-96 gi|194670659|ref|XP_001790681.1| PREDICTED: cancer (2363) 1876 361.1 1.4e-96 gi|149022996|gb|EDL79890.1| rCG27195 [Rattus norve ( 267) 1636 315.5 8.3e-84 gi|126278383|ref|XP_001381122.1| PREDICTED: simila (3504) 1567 303.6 4.2e-79 gi|114656375|ref|XP_510312.2| PREDICTED: cancer su (2237) 1528 296.1 4.7e-77 gi|119612835|gb|EAW92429.1| cancer susceptibility (2196) 1282 250.2 3.1e-63 gi|50747632|ref|XP_420937.1| PREDICTED: hypothetic ( 227) 798 159.0 9.1e-37 gi|62089510|gb|AAH92163.1| Wu:fd18f09 protein [Dan ( 508) 628 127.6 5.9e-27 gi|189518021|ref|XP_001921879.1| PREDICTED: hypoth (1758) 627 127.8 1.7e-26 gi|220678328|emb|CAX14705.1| novel protein (wu:fd1 (1793) 627 127.8 1.7e-26 gi|109080684|ref|XP_001096728.1| PREDICTED: simila (1852) 448 94.4 2e-16 gi|109470641|ref|XP_001080790.1| PREDICTED: simila (1992) 383 82.3 9.6e-13 gi|115705903|ref|XP_001204214.1| PREDICTED: hypoth (1803) 256 58.6 1.2e-05 gi|47219876|emb|CAF97146.1| unnamed protein produc ( 352) 226 52.4 0.00018 >>gi|126540736|emb|CAM45954.1| cancer susceptibility can (2119 aa) initn: 2386 init1: 2386 opt: 2386 Z-score: 2405.6 bits: 456.3 E(): 2.8e-125 Smith-Waterman score: 2386; 100.000% identity (100.000% similar) in 367 aa overlap (1-367:1753-2119) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :::::::::::::::::::::::::::::: gi|126 PRIQIYKEDCELLRQKIDELKISALNQNKLLADVNRNLWEKVKDYSDEELKNYGIYLNKI 1730 1740 1750 1760 1770 1780 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK 1790 1800 1810 1820 1830 1840 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT 1850 1860 1870 1880 1890 1900 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL 1910 1920 1930 1940 1950 1960 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG 1970 1980 1990 2000 2010 2020 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH 2030 2040 2050 2060 2070 2080 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD ::::::::::::::::::::::::::::::::::::: gi|126 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD 2090 2100 2110 >>gi|109468665|ref|XP_230465.4| PREDICTED: similar to ca (1991 aa) initn: 2189 init1: 2189 opt: 2189 Z-score: 2207.2 bits: 419.5 E(): 3.1e-114 Smith-Waterman score: 2189; 91.553% identity (96.730% similar) in 367 aa overlap (1-367:1547-1913) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :.:::::::::.:::::::::.:::::::: gi|109 PKIQIYREDCELLRQKIEELKVSALNQDKLLVDVNRNLWEKMKDYSDEELKTYGIYLNKI 1520 1530 1540 1550 1560 1570 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK :::::::::::.::::: ::.:::::::.:: ::::::::::::::::::::. :: ::: gi|109 KSRYTKMTKVFTHQGKVDLYSKLVHSAETEKRKLQIKINEMDTILKKINNCLTAVEIETK 1580 1590 1600 1610 1620 1630 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT ::: :::.::::.::::.::::::::.::::::::::::::::::::::::::::::::: gi|109 NLEAEEKDDAMEDWDSEIRDAEKELERLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT 1640 1650 1660 1670 1680 1690 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL :.:::::::::.::::.:::::.:::::::::::::::::::: ::::::::: : :: : gi|109 TETEELLDQLSFSEWDIIEWSDEQAVFTFVYDSIELIITFGEPQVGLPFLDKAYRTINEL 1700 1710 1720 1730 1740 1750 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG :::::::::::::::::::::::::::::: ::::::.:::::::::::::::::::::: gi|109 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQEFWKKKCTTQHQVPQMLQELSLVVNHCRLLG 1760 1770 1780 1790 1800 1810 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH ::::::::::::::::::::::::::::::: :::::::::: ::::::::::::::.:: gi|109 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSSAAFAKFEITLFPSAHYPLVPLPFTIQNH 1820 1830 1840 1850 1860 1870 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD .::::::::::.::::::::::::::::::::::::: gi|109 LGKTGHDEIAAVISKVPLEENYLKNVVKQIYQDLLKDXNFCHKPQITAITTKKKISIYPG 1880 1890 1900 1910 1920 1930 gi|109 IEVLSLFQLLHVCRLQTPELPAAKEPHSDKMVQRKDLSDPSPHPMRKNFSEALPQ 1940 1950 1960 1970 1980 1990 >>gi|12857151|dbj|BAB30909.1| unnamed protein product [M (331 aa) initn: 2151 init1: 2151 opt: 2151 Z-score: 2179.3 bits: 411.7 E(): 1.1e-112 Smith-Waterman score: 2151; 100.000% identity (100.000% similar) in 331 aa overlap (37-367:1-331) 10 20 30 40 50 60 mKIAA1 NLWEKVKDYSDEELKNYGIYLNKIKSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQI :::::::::::::::::::::::::::::: gi|128 MTKVFNHQGKVALYNKLVHSAENEKNKLQI 10 20 30 70 80 90 100 110 120 mKIAA1 KINEMDTILKKINNCLAEVETETKNLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KINEMDTILKKINNCLAEVETETKNLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQ 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 RKFLEVETQKTQTLAQIEFIKEQTTKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 RKFLEVETQKTQTLAQIEFIKEQTTKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIEL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 IITFGEPLVGLPFLDKACRKINALSFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 IITFGEPLVGLPFLDKACRKINALSFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKC 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TAQHQVPQMLQELSLVVNHCRLLGEEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 TAQHQVPQMLQELSLVVNHCRLLGEEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 KFEITLSPSAHYPLVPLPFTIHNHIGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KFEITLSPSAHYPLVPLPFTIHNHIGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLK 280 290 300 310 320 330 mKIAA1 D : gi|128 D >>gi|74000114|ref|XP_535434.2| PREDICTED: similar to can (2309 aa) initn: 1929 init1: 1463 opt: 1916 Z-score: 1930.9 bits: 368.6 E(): 7.6e-99 Smith-Waterman score: 1916; 78.202% identity (94.550% similar) in 367 aa overlap (1-367:1939-2304) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :.:.:::::::.. :::::: .::::::: gi|740 PKIQIYREDCEALCQKIEELKLSALNQDKLLTDINRNLWEKMRHCSDEELKVFGIYLNKI 1910 1920 1930 1940 1950 1960 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK ::..:::::::.::::::::.:::.::.::..::::.:.:::.:::::.::::::: ::: gi|740 KSHFTKMTKVFTHQGKVALYTKLVQSAQNERKKLQIRIDEMDNILKKIENCLAEVEIETK 1970 1980 1990 2000 2010 2020 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT ::. :::.. ::::::::: ::::::::::::.::::..::.:.:: ::::::.:...:: gi|740 NLD-EEKDNPMEEWDSEMRAAEKELEQLKTEEDELQRNLLELEVQKEQTLAQIDFVQKQT 2030 2040 2050 2060 2070 2080 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL .::::.::::::::..::::::::::::.::.::: ::::: .: ::::::::::: : gi|740 DRTEELMDQLSLSEWEAIEWSDDQAVFTFLYDTIELTITFGETVVDLPFLDKACRKIVDL 2090 2100 2110 2120 2130 2140 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG .::: :::::::::::::::::::::::.::::::::.:::.:.::::.::::.:::::: gi|740 NFQSRLDEDKAPPSSLLVHKLIFQYIEEKESWKKKCTTQHQIPKMLQEISLVVSHCRLLG 2150 2160 2170 2180 2190 2200 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH :::::::::::::.::.:.:.:::::::::: :::::::::: :.:.: :::::.:..: gi|740 EEIEFLKRWGPNYNLMNIDVTNTELRLLFSSSAAFAKFEITLPLSVHFPTVPLPFSIQKH 2210 2220 2230 2240 2250 2260 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD .:. :.:::.::.:::::..:::::::::::::::.: gi|740 LGNIGQDEITAILSKVPLKNNYLKNVVKQIYQDLLQDCHFYH 2270 2280 2290 2300 >>gi|149692474|ref|XP_001501147.1| PREDICTED: cancer sus (2292 aa) initn: 1936 init1: 1885 opt: 1886 Z-score: 1900.7 bits: 363.0 E(): 3.7e-97 Smith-Waterman score: 1886; 77.657% identity (94.005% similar) in 367 aa overlap (1-367:1921-2287) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :. ::.:::::.. :::::: .::::::. gi|149 PKIQIYREDCEVLRQKIEELKLSASNQDKLLTCVNKNLWEKMRHCSDEELKAFGIYLNKM 1900 1910 1920 1930 1940 1950 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK ::..:::::::.::::::::.:::.::.::..::...:.:::.:::::.:::. :: ::: gi|149 KSHFTKMTKVFTHQGKVALYSKLVQSAQNEREKLHMRIDEMDNILKKIDNCLTAVEIETK 1960 1970 1980 1990 2000 2010 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT :::.:::.. .:::::::: ::::::::::::: :::..::.:.:: ::::::.:...:: gi|149 NLEDEEKDNPVEEWDSEMRAAEKELEQLKTEEEVLQRNLLELEVQKEQTLAQIDFVQKQT 2020 2030 2040 2050 2060 2070 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL ..:::::::::::::::::::::::::::.::.::: ::::::.::: :: .: ::: : gi|149 NRTEELLDQLSLSEWDVIEWSDDQAVFTFLYDTIELTITFGEPVVGLSFLGNAHRKIVDL 2080 2090 2100 2110 2120 2130 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG .::::::::::::::::::::::::::::::::::::.:::::.::::.::::.:::::: gi|149 NFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTTQHQVPKMLQEISLVVSHCRLLG 2140 2150 2160 2170 2180 2190 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH :::::::::::::.::.:.:::::::::::: :::.::::::: :: :: ::: :.:.:: gi|149 EEIEFLKRWGPNYNLMNIDVNNTELRLLFSSSAAFSKFEITLSLSALYPSVPLTFSIQNH 2200 2210 2220 2230 2240 2250 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD ::. :..::..:.::::::.:::::::::.:.:::.: gi|149 IGNIGQNEITTILSKVPLEDNYLKNVVKQVYRDLLQDCHFSH 2260 2270 2280 2290 >>gi|18308012|gb|AAL67803.1|AF461041_1 AF15q14 isoform 2 (2316 aa) initn: 1873 init1: 1849 opt: 1876 Z-score: 1890.5 bits: 361.1 E(): 1.3e-96 Smith-Waterman score: 1876; 76.294% identity (94.005% similar) in 367 aa overlap (1-367:1945-2311) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :.:.:.:::::.. ::.::: .::::::: gi|183 PKIQIYREDCEARRQKIEELKLSASNQDKLLVDINKNLWEKMRHCSDKELKAFGIYLNKI 1920 1930 1940 1950 1960 1970 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK :: .:::::::.::::::::.:::.::.::..::::::.::: :::::.:::.:.::::: gi|183 KSCFTKMTKVFTHQGKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETK 1980 1990 2000 2010 2020 2030 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT :::.::::. .:::::::: :::::::::::::::::..::.:.:: ::::::.:...: gi|183 NLEDEEKNNPVEEWDSEMRAAEKELEQLKTEEEELQRNLLELEVQKEQTLAQIDFMQKQR 2040 2050 2060 2070 2080 2090 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL ..:::::::::::::::.::::::::::::::.:.: ::: : .::.::::: ::: . gi|183 NRTEELLDQLSLSEWDVVEWSDDQAVFTFVYDTIQLTITFEESVVGFPFLDKRYRKIVDV 2100 2110 2120 2130 2140 2150 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG .::::::::.:::::::::::::::.::.::::: ::.:::.:.::.:.::::.:::::: gi|183 NFQSLLDEDQAPPSSLLVHKLIFQYVEEKESWKKTCTTQHQLPKMLEEFSLVVHHCRLLG 2160 2170 2180 2190 2200 2210 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH ::::.::::::::.::.:..::.:::::::: :::::::::: ::.:: :::: ::.:: gi|183 EEIEYLKRWGPNYNLMNIDINNNELRLLFSSSAAFAKFEITLFLSAYYPSVPLPSTIQNH 2220 2230 2240 2250 2260 2270 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD .:.:..:.::.:.::::::.::::::::::::::..: gi|183 VGNTSQDDIATILSKVPLENNYLKNVVKQIYQDLFQDCHFYH 2280 2290 2300 2310 >>gi|74048554|ref|NP_653091.2| cancer susceptibility can (2316 aa) initn: 1873 init1: 1849 opt: 1876 Z-score: 1890.5 bits: 361.1 E(): 1.3e-96 Smith-Waterman score: 1876; 76.294% identity (94.005% similar) in 367 aa overlap (1-367:1945-2311) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :.:.:.:::::.. ::.::: .::::::: gi|740 PKIQIYREDCEARRQKIEELKLSASNQDKLLVDINKNLWEKMRHCSDKELKAFGIYLNKI 1920 1930 1940 1950 1960 1970 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK :: .:::::::.::::::::.:::.::.::..::::::.::: :::::.:::.:.::::: gi|740 KSCFTKMTKVFTHQGKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETK 1980 1990 2000 2010 2020 2030 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT :::.::::. .:::::::: :::::::::::::::::..::.:.:: ::::::.:...: gi|740 NLEDEEKNNPVEEWDSEMRAAEKELEQLKTEEEELQRNLLELEVQKEQTLAQIDFMQKQR 2040 2050 2060 2070 2080 2090 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL ..:::::::::::::::.::::::::::::::.:.: ::: : .::.::::: ::: . gi|740 NRTEELLDQLSLSEWDVVEWSDDQAVFTFVYDTIQLTITFEESVVGFPFLDKRYRKIVDV 2100 2110 2120 2130 2140 2150 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG .::::::::.:::::::::::::::.::.::::: ::.:::.:.::.:.::::.:::::: gi|740 NFQSLLDEDQAPPSSLLVHKLIFQYVEEKESWKKTCTTQHQLPKMLEEFSLVVHHCRLLG 2160 2170 2180 2190 2200 2210 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH ::::.::::::::.::.:..::.:::::::: :::::::::: ::.:: :::: ::.:: gi|740 EEIEYLKRWGPNYNLMNIDINNNELRLLFSSSAAFAKFEITLFLSAYYPSVPLPSTIQNH 2220 2230 2240 2250 2260 2270 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD .:.:..:.::.:.::::::.::::::::::::::..: gi|740 VGNTSQDDIATILSKVPLENNYLKNVVKQIYQDLFQDCHFYH 2280 2290 2300 2310 >>gi|21280444|gb|AAM45143.1|AF173994_1 AF15q14 [Homo sap (2342 aa) initn: 1873 init1: 1849 opt: 1876 Z-score: 1890.5 bits: 361.1 E(): 1.4e-96 Smith-Waterman score: 1876; 76.294% identity (94.005% similar) in 367 aa overlap (1-367:1971-2337) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :.:.:.:::::.. ::.::: .::::::: gi|212 PKIQIYREDCEARRQKIEELKLSASNQDKLLVDINKNLWEKMRHCSDKELKAFGIYLNKI 1950 1960 1970 1980 1990 2000 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK :: .:::::::.::::::::.:::.::.::..::::::.::: :::::.:::.:.::::: gi|212 KSCFTKMTKVFTHQGKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETK 2010 2020 2030 2040 2050 2060 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT :::.::::. .:::::::: :::::::::::::::::..::.:.:: ::::::.:...: gi|212 NLEDEEKNNPVEEWDSEMRAAEKELEQLKTEEEELQRNLLELEVQKEQTLAQIDFMQKQR 2070 2080 2090 2100 2110 2120 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL ..:::::::::::::::.::::::::::::::.:.: ::: : .::.::::: ::: . gi|212 NRTEELLDQLSLSEWDVVEWSDDQAVFTFVYDTIQLTITFEESVVGFPFLDKRYRKIVDV 2130 2140 2150 2160 2170 2180 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG .::::::::.:::::::::::::::.::.::::: ::.:::.:.::.:.::::.:::::: gi|212 NFQSLLDEDQAPPSSLLVHKLIFQYVEEKESWKKTCTTQHQLPKMLEEFSLVVHHCRLLG 2190 2200 2210 2220 2230 2240 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH ::::.::::::::.::.:..::.:::::::: :::::::::: ::.:: :::: ::.:: gi|212 EEIEYLKRWGPNYNLMNIDINNNELRLLFSSSAAFAKFEITLFLSAYYPSVPLPSTIQNH 2250 2260 2270 2280 2290 2300 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD .:.:..:.::.:.::::::.::::::::::::::..: gi|212 VGNTSQDDIATILSKVPLENNYLKNVVKQIYQDLFQDCHFYH 2310 2320 2330 2340 >>gi|74048514|ref|NP_733468.2| cancer susceptibility can (2342 aa) initn: 1873 init1: 1849 opt: 1876 Z-score: 1890.5 bits: 361.1 E(): 1.4e-96 Smith-Waterman score: 1876; 76.294% identity (94.005% similar) in 367 aa overlap (1-367:1971-2337) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :.:.:.:::::.. ::.::: .::::::: gi|740 PKIQIYREDCEARRQKIEELKLSASNQDKLLVDINKNLWEKMRHCSDKELKAFGIYLNKI 1950 1960 1970 1980 1990 2000 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK :: .:::::::.::::::::.:::.::.::..::::::.::: :::::.:::.:.::::: gi|740 KSCFTKMTKVFTHQGKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETK 2010 2020 2030 2040 2050 2060 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT :::.::::. .:::::::: :::::::::::::::::..::.:.:: ::::::.:...: gi|740 NLEDEEKNNPVEEWDSEMRAAEKELEQLKTEEEELQRNLLELEVQKEQTLAQIDFMQKQR 2070 2080 2090 2100 2110 2120 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL ..:::::::::::::::.::::::::::::::.:.: ::: : .::.::::: ::: . gi|740 NRTEELLDQLSLSEWDVVEWSDDQAVFTFVYDTIQLTITFEESVVGFPFLDKRYRKIVDV 2130 2140 2150 2160 2170 2180 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG .::::::::.:::::::::::::::.::.::::: ::.:::.:.::.:.::::.:::::: gi|740 NFQSLLDEDQAPPSSLLVHKLIFQYVEEKESWKKTCTTQHQLPKMLEEFSLVVHHCRLLG 2190 2200 2210 2220 2230 2240 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH ::::.::::::::.::.:..::.:::::::: :::::::::: ::.:: :::: ::.:: gi|740 EEIEYLKRWGPNYNLMNIDINNNELRLLFSSSAAFAKFEITLFLSAYYPSVPLPSTIQNH 2250 2260 2270 2280 2290 2300 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD .:.:..:.::.:.::::::.::::::::::::::..: gi|740 VGNTSQDDIATILSKVPLENNYLKNVVKQIYQDLFQDCHFYH 2310 2320 2330 2340 >>gi|223590239|sp|Q8NG31.3|CASC5_HUMAN RecName: Full=Pro (2342 aa) initn: 1873 init1: 1849 opt: 1876 Z-score: 1890.5 bits: 361.1 E(): 1.4e-96 Smith-Waterman score: 1876; 76.294% identity (94.005% similar) in 367 aa overlap (1-367:1971-2337) 10 20 30 mKIAA1 LADVNRNLWEKVKDYSDEELKNYGIYLNKI :.:.:.:::::.. ::.::: .::::::: gi|223 PKIQIYREDCEARRQKIEELKLSASNQDKLLVDINKNLWEKMRHCSDKELKAFGIYLNKI 1950 1960 1970 1980 1990 2000 40 50 60 70 80 90 mKIAA1 KSRYTKMTKVFNHQGKVALYNKLVHSAENEKNKLQIKINEMDTILKKINNCLAEVETETK :: .:::::::.::::::::.:::.::.::..::::::.::: :::::.:::.:.::::: gi|223 KSCFTKMTKVFTHQGKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETK 2010 2020 2030 2040 2050 2060 100 110 120 130 140 150 mKIAA1 NLENEEKNDAMEEWDSEMRDAEKELEQLKTEEEELQRKFLEVETQKTQTLAQIEFIKEQT :::.::::. .:::::::: :::::::::::::::::..::.:.:: ::::::.:...: gi|223 NLEDEEKNNPVEEWDSEMRAAEKELEQLKTEEEELQRNLLELEVQKEQTLAQIDFMQKQR 2070 2080 2090 2100 2110 2120 160 170 180 190 200 210 mKIAA1 TKTEELLDQLSLSEWDVIEWSDDQAVFTFVYDSIELIITFGEPLVGLPFLDKACRKINAL ..:::::::::::::::.::::::::::::::.:.: ::: : .::.::::: ::: . gi|223 NRTEELLDQLSLSEWDVVEWSDDQAVFTFVYDTIQLTITFEESVVGFPFLDKRYRKIVDV 2130 2140 2150 2160 2170 2180 220 230 240 250 260 270 mKIAA1 SFQSLLDEDKAPPSSLLVHKLIFQYIEEQESWKKKCTAQHQVPQMLQELSLVVNHCRLLG .::::::::.:::::::::::::::.::.::::: ::.:::.:.::.:.::::.:::::: gi|223 NFQSLLDEDQAPPSSLLVHKLIFQYVEEKESWKKTCTTQHQLPKMLEEFSLVVHHCRLLG 2190 2200 2210 2220 2230 2240 280 290 300 310 320 330 mKIAA1 EEIEFLKRWGPNYSLMHINVNNTELRLLFSSCAAFAKFEITLSPSAHYPLVPLPFTIHNH ::::.::::::::.::.:..::.:::::::: :::::::::: ::.:: :::: ::.:: gi|223 EEIEYLKRWGPNYNLMNIDINNNELRLLFSSSAAFAKFEITLFLSAYYPSVPLPSTIQNH 2250 2260 2270 2280 2290 2300 340 350 360 mKIAA1 IGKTGHDEIAAIISKVPLEENYLKNVVKQIYQDLLKD .:.:..:.::.:.::::::.::::::::::::::..: gi|223 VGNTSQDDIATILSKVPLENNYLKNVVKQIYQDLFQDCHFYH 2310 2320 2330 2340 367 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 22:43:30 2009 done: Sat Mar 14 22:49:40 2009 Total Scan time: 845.030 Total Display time: 0.200 Function used was FASTA [version 34.26.5 April 26, 2007]