FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1325.ptfa, 356 aa vs ./tmplib.26680 library 1768661 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.8815+/-0.00406; mu= 17.4963+/- 0.273 mean_var=76.3454+/-17.201, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1468 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4137 ( 832 res) mbg17504 ( 832) 187 49 8.8e-07 mKIAA0141 ( 525 res) mej00228 ( 525) 151 41 0.00013 mKIAA0746 ( 1185 res) mbh01156 (1185) 134 38 0.0026 >>mKIAA4137 ( 832 res) mbg17504 (832 aa) initn: 170 init1: 115 opt: 187 Z-score: 214.1 bits: 49.4 E(): 8.8e-07 Smith-Waterman score: 192; 28.877% identity (31.765% ungapped) in 187 aa overlap (82-262:392-567) 60 70 80 90 100 mKIAA1 VDTALQFLKERIRRGDAMAYFLRGQLYFEEGWYEEALAQFEE-IQEK-DHQAIYQLGVMY : :: : :. . . :: : :: :: .. mKIAA4 HVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLH 370 380 390 400 410 420 110 120 130 140 150 160 mKIAA1 -YDGLGTIANAEKGVNYMRKILDSSCPQTMHLKFAAAYNLGRAYFEGKG-VKRSDEEAER . : :. : ... .:. ... ..: . ::. : ::. : .:.: : . mKIAA4 LHGGRGVEQNHQRAFDYFNLAANAGNSHAMAF-------LGKMYSEGSDIVPQSNETALH 430 440 450 460 470 170 180 190 200 210 220 mKIAA1 LWLLAADNGNPKASVKAQSILGLFYSMKEPKEL--EKAFFWHSEACGNGSLESQGALGLM . ::: ::: . :: ::. : . . .. . :. . ..: .: ...: :: : mKIAA4 YFKKAADMGNPVG----QSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSM 480 490 500 510 520 530 230 240 250 260 270 280 mKIAA1 YFYGQGIRQDTDAALHCLREAAERGNVYAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVH :. : :...: ::. . :.. :.. : .:.... mKIAA4 YYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCER 540 550 560 570 580 590 290 300 310 320 330 340 mKIAA1 DIPMIAHVTDCLPEFIIKGMAMAAFYHGRCLQLGLGIMKDEESAKHYYSKACRLNPTLAD mKIAA4 GRWSERLMTAYNSYKDEDYNAAVVQYLLLAEQGYEVAQSNAAFILDQREATIVGENETYP 600 610 620 630 640 650 >>mKIAA0141 ( 525 res) mej00228 (525 aa) initn: 115 init1: 115 opt: 151 Z-score: 175.0 bits: 41.5 E(): 0.00013 Smith-Waterman score: 184; 25.701% identity (28.646% ungapped) in 214 aa overlap (52-258:245-443) 30 40 50 60 70 80 mKIAA1 PFSLSQYAAKQQKFFQWKKEKPDYYLHANLVDTALQFLKERIRRGDAMAYFLRGQLYFEE .. :. ... .. . :... . : .. mKIAA0 ASRDFASQAKAAEAHPPGGKNEQDKAKALPLEEAVTSIQQLFQLSVAITFNFLGTENIKT 220 230 240 250 260 270 90 100 110 120 130 140 mKIAA1 GWYEEALAQFEEIQEKDH-QAIYQLGVMYYDGLGTIANAEKGVNYMRKILDSSCPQTMHL : : :.. :.. .. . .: :..:. : :: . :.. ... : . ... mKIAA0 GDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYH--LAAVQGHSL-- 280 290 300 310 320 330 150 160 170 180 190 mKIAA1 KFAAAYNLGRAYFEGKGVKRSDEEAER---LWLLAADNGNPKASVKAQSILGLFYSMKEP : : .: ... : . :: : :: : :::.: ..::..::.... ::: mKIAA0 ---AQYRYARCLLQSPG-SLSDPERERAVSLLKQAADSG----LTEAQAFLGVLFT-KEP 340 350 360 370 380 200 210 220 230 240 250 mKIAA1 KELEK---AFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLREAAERGNVYA . :. ..: : .::. .:. ::. : : : ... :..: ..:: :: : mKIAA0 HLDEQRAVKYLWL--AASNGDSQSRFHLGICYEKGLGAQRNLGEAVKCYQQAAAMGNEPA 390 400 410 420 430 260 270 280 290 300 310 mKIAA1 QGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAAFYHGR . : mKIAA0 RERLRTLFNVEAAGPSHLATTGLKSFSSPSLCSLNTLLAGASGLPHASSTGNLGLLCRSG 440 450 460 470 480 490 >>mKIAA0746 ( 1185 res) mbh01156 (1185 aa) initn: 134 init1: 80 opt: 134 Z-score: 151.9 bits: 38.4 E(): 0.0026 Smith-Waterman score: 148; 22.745% identity (25.893% ungapped) in 255 aa overlap (20-256:693-934) 10 20 30 40 mKIAA1 SDKDPHCGDRMKLSSEKLPKNPFSLSQYAAK-QQKFFQWKKEKPDYYLH :.: :.:.. . .: . . . : : :. mKIAA0 MNLGYKHYQGVDSYPLDWELSYAYYSNIATKTP--LDQHTLQGDQAYVETIRLKDDEILK 670 680 690 700 710 720 50 60 70 80 90 mKIAA1 ANLVDTA--LQFLKERIRRGDAMAYFLRGQLYF--EEGWYEEALAQFE-----EIQEKDH .. . . ...::.. ::.: : .:. : ..: .. : .: .. .: mKIAA0 VQTKEDGDVFMWLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDP 730 740 750 760 770 780 100 110 120 130 140 150 mKIAA1 QAIYQLGVMYYDGLGTIANAEKGVNYMRKILDSSCPQTMHLKFAAAYNLGRAYFEGKGVK ::. ... . : :. : . ... :.: . . .: :. .:: : . . mKIAA0 ALIYDYAIVLFKGQGVKKNRRLALELMKK----AASKGLH---QAVNGLGWYYHK---FR 790 800 810 820 830 160 170 180 190 200 210 mKIAA1 RSDEEAERLWLLAADNGNPKASVKAQSIL--GLFYSMKEPKELEKAFFWHSEACGNGSLE .. .: . :: : . ::: :: . . :.: .. . . ..:. : : : .: mKIAA0 KNYAKAAKYWLKAEEMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQG-GHIE 840 850 860 870 880 220 230 240 250 260 270 mKIAA1 SQGALGLMYFYG--QGIRQDTDAALHCLREAAER----GNVYAQGTLVEYYYKMKFFTKC . .:.:. : . . .: . :. ...::. :.: .: mKIAA0 GTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEGLWHEALLY 890 900 910 920 930 940 280 290 300 310 320 330 mKIAA1 VSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAAFYHGRCLQLGLGIMKDEESAKH mKIAA0 YVLAAETGIEVSQTNLAHICEERPDLAGRYLGVNCVWRYYNFSVFQIDAPSFAYLKMGDL 950 960 970 980 990 1000 356 residues in 1 query sequences 1768661 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:41:06 2006 done: Mon Mar 27 10:41:07 2006 Scan time: 0.570 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]