FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1435.ptfa, 411 aa vs ./tmplib.26680 library 1768606 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.1678+/-0.00461; mu= 16.8657+/- 0.310 mean_var=124.4073+/-29.170, 0's: 0 Z-trim: 23 B-trim: 0 in 0/36 Lambda= 0.1150 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4167 ( 342 res) mpj04828 ( 342) 190 43 4.5e-05 mKIAA1255 ( 176 res) mbg10338 ( 176) 179 40 0.00012 mKIAA1643 ( 950 res) mbh04344 ( 950) 183 42 0.00016 mKIAA0993 ( 646 res) mbg00079 ( 646) 171 40 0.00054 mKIAA4212 ( 600 res) mbg08227 ( 600) 169 40 0.00066 mKIAA0321 ( 2548 res) mef00119 (2548) 172 41 0.00093 mKIAA0647 ( 1186 res) mbg01911 (1186) 159 38 0.0029 mKIAA1449 ( 675 res) mbg03116 ( 675) 155 37 0.0035 mFLJ00025 ( 1204 res) mfj36335 (1204) 157 38 0.0037 mKIAA1589 ( 775 res) mbh04724 ( 775) 151 37 0.0059 mKIAA1537 ( 628 res) mbg18407 ( 628) 146 36 0.0095 mKIAA1362 ( 1407 res) mia41047 (1407) 149 37 0.0099 >>mKIAA4167 ( 342 res) mpj04828 (342 aa) initn: 254 init1: 102 opt: 190 Z-score: 183.4 bits: 42.6 E(): 4.5e-05 Smith-Waterman score: 210; 21.678% identity (23.485% ungapped) in 286 aa overlap (10-287:38-309) 10 20 30 mKIAA1 NMAAEIHSRPQSSRPVLLSKIEGHQDAVTAALLIPKEDG ::. .: . ::. :.... . :. . mKIAA4 ANYRAGSMATEHLPAERAQSLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEW 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 VITASEDRTIRVWLKRDSGQYWPSIY-HTMASPCSAMAYHHDSRRIFVGQDNGAVMEFHV . ... : : .: : :. ..: :.. : .:. :: :. ..:. .. . mKIAA4 LASSAADALIIIWGAYD-GNCKKTLYGHSLE--ISDVAWSSDSSRLVSASDDKTLKVW-- 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 SEDFNKMNFIKTYPAHQNRVSAIIFSLSAEWVISTGHDKCVSWMCTRSGNMLGR-HFFSS :. . . .:: .:.. : :. .. ..: . :. :. ...:. : :. mKIAA4 --DMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSD 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 WASCLQYDLDTQHAFVGDYSGQITLLKLEQNTCSVITTLKGHEGS--IACLWWDPIQRLL : .... . . :.:.: . .. : . :: . ::. .. . ..: . . mKIAA4 PISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC--LRTL-ADEGNPPVSFVKFSPNGKYI 190 200 210 220 230 220 230 240 250 260 270 mKIAA1 FSGASDNSVIMWDIGGRKGRTL-LLQGHHDRVQSL-CYLQLT--RQLVSCSADGGIAVWN .... ::.. .:: . .:: : ::... : ...: . .:: : :. . .:: mKIAA4 LTATLDNTLKLWDYS--RGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN 240 250 260 270 280 290 280 290 300 310 320 330 mKIAA1 MDVSREEAPQWLESDSCQKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSSKRS ... .: : :.. . mKIAA4 LQT--KEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSSDC 300 310 320 330 340 >>mKIAA1255 ( 176 res) mbg10338 (176 aa) initn: 142 init1: 142 opt: 179 Z-score: 176.0 bits: 40.3 E(): 0.00012 Smith-Waterman score: 196; 27.068% identity (34.615% ungapped) in 133 aa overlap (233-350:50-168) 210 220 230 240 250 260 mKIAA1 IACLWWDPIQRLLFSGASDNSVIMWDIGGRKGRTLLLQGHHDRVQSLCYLQLTRQLV--S .: :.:: .. .:: ..:. : . mKIAA1 LGQYGKENAAAIFDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCR-AIVRSGVRLG 20 30 40 50 60 70 270 280 290 300 mKIAA1 CSADGGIAVWNMDVSREE-----------APQWLESDSCQKCEQPFFWNIKQMWDTKTLG . . :. ..:..:. .. : : ....: .: : . mKIAA1 VNNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSNCYECTAKF-----------GVT 80 90 100 110 120 310 320 330 340 350 360 mKIAA1 LRQHHCRKCGQAVCGKCSSKRSSYPVMGFEFQ--VRVCDSCYDSIKDEDRTSLATFHEGK :.::::.::. .: :::.:. :.. :... ::::. :.: mKIAA1 TRKHHCRHCGRLLCHKCSTKE--IPIIKFDLNKPVRVCNICFDVLTLGGVS 130 140 150 160 170 370 380 390 400 410 mKIAA1 HNISHMSMDIARGLMVTCGTDRVVKIWDMTPVVGCSLATGFSPH >>mKIAA1643 ( 950 res) mbh04344 (950 aa) initn: 159 init1: 159 opt: 183 Z-score: 173.3 bits: 42.2 E(): 0.00016 Smith-Waterman score: 197; 32.407% identity (38.462% ungapped) in 108 aa overlap (245-349:843-936) 220 230 240 250 260 270 mKIAA1 LFSGASDNSVIMWDIGGRKGRTLLLQGHHDRVQSLCYLQLTRQLVSCSADGGIAVWNMDV : .: : .. :: : .:. . : mKIAA1 RSILKTLFEVMATKPETDDKEKLKKVTQTLRSAALEDCALCQETVSSSE---LAAKTRDG 820 830 840 850 860 280 290 300 310 320 330 mKIAA1 SREEAPQWLESDSC---QKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSSKRS . :. :.:. ...: .:. :: :. :.::::.::. :..:::. . mKIAA1 DFEDPPEWVPDEACGFCTSCKAPF-----------TVIRRKHHCRSCGKIFCSRCSSHSA 870 880 890 900 910 340 350 360 370 380 390 mKIAA1 SYPVMGFEFQVRVCDSCYDSIKDEDRTSLATFHEGKHNISHMSMDIARGLMVTCGTDRVV : .: :::: :: mKIAA1 PLPRYGQVKPVRVCTHCYMFHVTPFYSDKTGM 920 930 940 950 >>mKIAA0993 ( 646 res) mbg00079 (646 aa) initn: 337 init1: 154 opt: 171 Z-score: 164.0 bits: 39.9 E(): 0.00054 Smith-Waterman score: 189; 25.551% identity (31.351% ungapped) in 227 aa overlap (140-355:441-636) 110 120 130 140 150 160 mKIAA1 TYPAHQNRVSAIIFSLSAEWVISTGHDKCVSWMCTRSGNMLGRHFFSSWASCLQYDLDTQ .: :: ::. .:. :.. :. : mKIAA0 PSVSQDPKDTSSQPSSTSHRPRAASCRATATW-CTDSGSDDSRR----WSDQLSLDEKDG 420 430 440 450 460 170 180 190 200 210 220 mKIAA1 HAFVGDYSGQI------TLLKLEQNTCSVITTLKGHEGSIACLWWDPIQRLLFSGASDNS ::. :: : . . : . . . . : :. ..:.: .. mKIAA0 FIFVNYSEGQTRAHLQGPLAHPHPNPIEARSYSRLKPG----YRWE--RQLVFR----SK 470 480 490 500 510 230 240 250 260 270 280 mKIAA1 VIMWDIGGRKGRTLLLQGHHDRVQSLCYLQLTRQLVSCSADGGIAVWNMD--VSREEAPQ . : :: : : .: .: . ... .. : . :... .: : . mKIAA0 LTMHTAFDRKDNT-----HPAEVTALGVSKDHSRILVGDSRGRVFSWSVSDQPGRSAADH 520 530 540 550 560 570 290 300 310 320 330 mKIAA1 WLES---DSCQKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSSKRSSYPVMGF :... :::. : : .: :.::::.::: : ::: .: . . mKIAA0 WVKDEGGDSCSGCSVRF-----------SLTERRHHCRNCGQLFCQKCSRFQSEIKRLKI 580 590 600 610 340 350 360 370 380 390 mKIAA1 EFQVRVCDSCYDSIKDEDRTSLATFHEGKHNISHMSMDIARGLMVTCGTDRVVKIWDMTP ::::..:: :.. : mKIAA0 SSPVRVCQNCYYSLQHERGAEDGPRNC 620 630 640 >>mKIAA4212 ( 600 res) mbg08227 (600 aa) initn: 201 init1: 114 opt: 169 Z-score: 162.5 bits: 39.6 E(): 0.00066 Smith-Waterman score: 179; 36.620% identity (47.273% ungapped) in 71 aa overlap (282-349:531-588) 260 270 280 290 300 mKIAA1 LQLTRQLVSCSADGGIAVWNMDVSREEAPQWLESDS---CQKCEQPFFWNIKQMWDTKTL ::..: :..::. : .. mKIAA4 ALQEMGLHLSQSKLKMEDIKEVNKALKGHTWLKDDEATHCKQCEKDF-----------SI 510 520 530 540 310 320 330 340 350 360 mKIAA1 GLRQHHCRKCGQAVCGKCSSKRSSYPVMGFEFQVRVCDSCYDSIKDEDRTSLATFHEGKH . :.::::.::. :. :::.. . : .. :::::::. mKIAA4 SRRKHHCRNCGHIFCNTCSSNELALP--SYPKPVRVCDSCHTLLLQRCSSTAS 550 560 570 580 590 600 370 380 390 400 410 mKIAA1 NISHMSMDIARGLMVTCGTDRVVKIWDMTPVVGCSLATGFSPH >>mKIAA0321 ( 2548 res) mef00119 (2548 aa) initn: 207 init1: 126 opt: 172 Z-score: 159.8 bits: 41.1 E(): 0.00093 Smith-Waterman score: 181; 41.250% identity (52.381% ungapped) in 80 aa overlap (281-356:1817-1883) 260 270 280 290 300 mKIAA1 YLQLTRQLVSCSADGGIAVWNMDVSREEAPQWL--ESDS-CQKCEQPFFWNIKQMWDTKT ::. :..: :. : . : : mKIAA0 VRSPSPKERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVCCREHF----------T 1790 1800 1810 1820 1830 310 320 330 340 350 360 mKIAA1 LGLRQHHCRKCGQAVCGKCSSKRSSYPVMGF-EFQVRVCDSCYDSIKDEDRTSLATFHEG . :.::::.::. :::.::.:. . : :: : .::::.:: : ..: mKIAA0 MFNRRHHCRRCGRLVCGSCSTKK--MVVEGFRENPTRVCDQCY-SYYNKDTPEESPCQSE 1840 1850 1860 1870 1880 1890 370 380 390 400 410 mKIAA1 KHNISHMSMDIARGLMVTCGTDRVVKIWDMTPVVGCSLATGFSPH mKIAA0 VPDSAKNESPPYSAVVRVPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLH 1900 1910 1920 1930 1940 1950 >>mKIAA0647 ( 1186 res) mbg01911 (1186 aa) initn: 157 init1: 130 opt: 159 Z-score: 151.0 bits: 38.4 E(): 0.0029 Smith-Waterman score: 159; 28.846% identity (33.708% ungapped) in 104 aa overlap (268-367:1087-1179) 240 250 260 270 280 290 mKIAA1 LLQGHHDRVQSLCYLQLTRQLVSCSADGGIAVWN-MDVSREEAPQWLE---SDSCQKCEQ : :. .: .. :. .:. .. : .:. mKIAA0 YEDDFTCLKESDGSDTEDFGSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDC 1060 1070 1080 1090 1100 1110 300 310 320 330 340 350 mKIAA1 PFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSSKRSSYPVMGFEFQVRVCDSCYDSIK : : .: :.::::.::.. :. : . : . . : ::.:::. :. mKIAA0 EF-------WLAK----RRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHIQ 1120 1130 1140 1150 1160 360 370 380 390 400 410 mKIAA1 DEDRTSLATFHEGKHNISHMSMDIARGLMVTCGTDRVVKIWDMTPVVGCSLATGFSPH : . : : mKIAA0 VSRARELMSQHLKKPIATASS 1170 1180 >>mKIAA1449 ( 675 res) mbg03116 (675 aa) initn: 119 init1: 80 opt: 155 Z-score: 149.5 bits: 37.3 E(): 0.0035 Smith-Waterman score: 167; 22.277% identity (23.438% ungapped) in 202 aa overlap (83-276:43-242) 60 70 80 90 100 110 mKIAA1 LKRDSGQYWPSIYHTMASPCSAMAYHHDSRRIFVGQDNGAVMEFHVSEDFNKMNFIKTYP :.:.. .. . . :.. .. .: .. mKIAA1 KVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQH-KQDPYIASME 20 30 40 50 60 70 120 130 140 150 160 170 mKIAA1 AHQNRVSAIIFSLSAEWVISTGHDKCVS-WMCTRSGNMLGRHFFSSWASCLQYDLDTQHA : . :. ... ... .::.. : :. : .. : . ..... : : : . . mKIAA1 HHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 80 90 100 110 120 130 180 190 200 210 220 mKIAA1 FVGDYSGQI------TLLKLEQNTCSVITT-LKGHEGSIACLWWDPIQRLLFSGASDNSV . . :: :: : .. .: :. :.:.. :: : . . .. ::.... . mKIAA1 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 140 150 160 170 180 190 230 240 250 260 270 280 mKIAA1 IMWDIGGRKGRTLLLQGHHDRVQSLCYLQLTRQLVSCSADGGIAVWNMDVSREEAPQWLE .:: .. . :.:: : :..: . : .: :.:: : .: . .: mKIAA1 RVWD-PRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWFLGQQRCIATYRVH 200 210 220 230 240 250 290 300 310 320 330 340 mKIAA1 SDSCQKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSSKRSSYPVMGFEFQVRV mKIAA1 DEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPPA 260 270 280 290 300 310 >>mFLJ00025 ( 1204 res) mfj36335 (1204 aa) initn: 124 init1: 96 opt: 157 Z-score: 149.1 bits: 38.1 E(): 0.0037 Smith-Waterman score: 157; 30.769% identity (35.644% ungapped) in 117 aa overlap (161-271:36-142) 140 150 160 170 180 mKIAA1 ISTGHDKCVSWMCTRSGNMLGRHFFSSWASCLQYDLDTQHAFVGDYSGQIT-----LLKL :. ::: :: : . : :: mFLJ00 LLLPRLGGGARSVRETAMRAVLTWRDKAEQCI-YDL----AFKPDGTQLILAAGNRLLVY 10 20 30 40 50 60 190 200 210 220 230 240 mKIAA1 EQNTCSVITTLKGHEGSIACLWWDPIQRLLFSGASDNSVIMWDIGGRKGRTLLLQGHHDR . . ... ::::. .. :. . . . ::..:.:.:.: : . .: :.: mFLJ00 DTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSIIIWT---SKLEGILKYTHNDS 70 80 90 100 110 250 260 270 280 290 300 mKIAA1 VQSLCYLQLTRQLVSCSA-DGGIAVWNMDVSREEAPQWLESDSCQKCEQPFFWNIKQMWD .: . : .:.::.:::. : :. :. mFLJ00 IQCVSYNPVTHQLASCSSSDFGL--WSPEQKSVSKHKSSSKITCCSWTNDGQYLALGMAN 120 130 140 150 160 170 >>mKIAA1589 ( 775 res) mbh04724 (775 aa) initn: 167 init1: 142 opt: 151 Z-score: 145.4 bits: 36.8 E(): 0.0059 Smith-Waterman score: 186; 33.858% identity (41.346% ungapped) in 127 aa overlap (234-351:546-658) 210 220 230 240 250 260 mKIAA1 ACLWWDPIQRLLFSGASDNSVIMWDIGGRKGRTLLLQGHHDRVQSLCY-LQLTRQLVSCS : .:. ... .: : ... : :: mKIAA1 GVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDAFLKDNNNAAQRLLDGMNFMAQSVSEL 520 530 540 550 560 570 270 280 290 300 310 mKIAA1 ADG---GIAVWNMDVSREEAPQ-WLESD---SCQKCEQPFFWNIKQMWDTKTLGLRQHHC . : ... : : . :: : .. ::..: : : ::: ::: mKIAA1 SLGPTKAVTSWLTD---QIAPAYWRPNSQILSCNQCATSFKDN-----DTK------HHC 580 590 600 610 620 320 330 340 350 360 370 mKIAA1 RKCGQAVCGKCSSKRSSYPVMGF-EFQVRVCDSCYDSIKDEDRTSLATFHEGKHNISHMS : ::.. : .:::: : :. :::::::::. mKIAA1 RACGEGFCDSCSSKTRPVPERGWGPAPVRVCDSCYDARNVQLDVTEADEGGTLIARKVGE 630 640 650 660 670 680 380 390 400 410 mKIAA1 MDIARGLMVTCGTDRVVKIWDMTPVVGCSLATGFSPH mKIAA1 AVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVKLSKHHCRACGQG 690 700 710 720 730 740 411 residues in 1 query sequences 1768606 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:44:50 2006 done: Mon Mar 27 10:44:51 2006 Scan time: 0.630 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]