# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbp02166.fasta.nr -Q ../query/mKIAA1317.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1317, 418 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919939 sequences Expectation_n fit: rho(ln(x))= 5.0403+/-0.000185; mu= 11.8284+/- 0.010 mean_var=77.8341+/-15.690, 0's: 36 Z-trim: 46 B-trim: 3425 in 1/65 Lambda= 0.145375 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|114149938|sp|Q5DTY9.2|KCD16_MOUSE RecName: Full ( 427) 2874 612.2 7.4e-173 gi|109506524|ref|XP_225971.4| PREDICTED: similar t ( 427) 2859 609.0 6.6e-172 gi|194219762|ref|XP_001917937.1| PREDICTED: potass ( 428) 2804 597.5 2e-168 gi|109079149|ref|XP_001098121.1| PREDICTED: simila ( 428) 2797 596.0 5.4e-168 gi|74708941|sp|Q68DU8.1|KCD16_HUMAN RecName: Full= ( 428) 2797 596.0 5.4e-168 gi|158258391|dbj|BAF85166.1| unnamed protein produ ( 428) 2786 593.7 2.7e-167 gi|73949558|ref|XP_544324.2| PREDICTED: similar to ( 428) 2769 590.1 3.2e-166 gi|126290530|ref|XP_001369046.1| PREDICTED: hypoth ( 427) 2727 581.3 1.4e-163 gi|118097646|ref|XP_425217.2| PREDICTED: hypotheti ( 427) 2586 551.8 1.1e-154 gi|190339664|gb|AAI62772.1| Potassium channel tetr ( 423) 2152 460.7 2.8e-127 gi|67967701|dbj|BAE00333.1| unnamed protein produc ( 318) 1814 389.7 5e-106 gi|119582266|gb|EAW61862.1| hCG1979860 [Homo sapie ( 414) 1811 389.2 9.4e-106 gi|119895666|ref|XP_606234.3| PREDICTED: similar t ( 314) 1805 387.8 1.8e-105 gi|47222919|emb|CAF99075.1| unnamed protein produc ( 419) 1797 386.3 7.3e-105 gi|224067326|ref|XP_002192911.1| PREDICTED: simila ( 279) 1694 364.5 1.7e-98 gi|118090562|ref|XP_001233940.1| PREDICTED: hypoth ( 434) 1693 364.5 2.7e-98 gi|47219253|emb|CAG11715.1| unnamed protein produc ( 278) 1529 329.9 4.5e-88 gi|59725633|gb|AAW92110.1| leftover/righton-like 3 ( 280) 1430 309.1 8e-82 gi|224049949|ref|XP_002194555.1| PREDICTED: simila ( 301) 1184 257.6 2.9e-66 gi|122937799|gb|ABM68628.1| potassium channel tetr ( 476) 1138 248.1 3.2e-63 gi|74749707|sp|Q6ZWB6.1|KCTD8_HUMAN RecName: Full= ( 473) 1127 245.8 1.6e-62 gi|119893833|ref|XP_590048.3| PREDICTED: similar t ( 470) 1126 245.6 1.8e-62 gi|126331671|ref|XP_001364789.1| PREDICTED: hypoth ( 471) 1123 245.0 2.8e-62 gi|109074127|ref|XP_001099551.1| PREDICTED: simila ( 473) 1122 244.8 3.3e-62 gi|26335653|dbj|BAC31527.1| unnamed protein produc ( 476) 1117 243.7 6.8e-62 gi|81886365|sp|Q50H33.1|KCTD8_MOUSE RecName: Full= ( 476) 1111 242.4 1.6e-61 gi|26335191|dbj|BAC31296.1| unnamed protein produc ( 477) 1111 242.4 1.6e-61 gi|26337365|dbj|BAC32368.1| unnamed protein produc ( 476) 1100 240.1 8.1e-61 gi|126342799|ref|XP_001370941.1| PREDICTED: hypoth ( 273) 1084 236.6 5.5e-60 gi|59725685|gb|AAW92112.1| righton [Danio rerio] ( 271) 1083 236.4 6.3e-60 gi|158254037|gb|AAI54160.1| Kctd12.2 protein [Dani ( 282) 1083 236.4 6.5e-60 gi|194209199|ref|XP_001917224.1| PREDICTED: simila ( 315) 1034 226.1 8.8e-57 gi|148678102|gb|EDL10049.1| mCG51668, isoform CRA_ ( 154) 1015 221.9 8.2e-56 gi|148678103|gb|EDL10050.1| mCG51668, isoform CRA_ ( 174) 1015 221.9 9e-56 gi|148678101|gb|EDL10048.1| mCG51668, isoform CRA_ ( 178) 1015 221.9 9.1e-56 gi|149017421|gb|EDL76472.1| rCG49532, isoform CRA_ ( 152) 1006 220.0 3e-55 gi|149017422|gb|EDL76473.1| rCG49532, isoform CRA_ ( 154) 1006 220.0 3e-55 gi|76676255|ref|XP_605310.2| PREDICTED: similar to ( 183) 995 217.8 1.7e-54 gi|194385110|dbj|BAG60961.1| unnamed protein produ ( 238) 981 214.9 1.6e-53 gi|194040738|ref|XP_001925952.1| PREDICTED: simila ( 289) 959 210.4 4.5e-52 gi|47230535|emb|CAF99728.1| unnamed protein produc ( 259) 950 208.4 1.5e-51 gi|224067070|ref|XP_002190121.1| PREDICTED: simila ( 149) 945 207.2 2.1e-51 gi|74200034|dbj|BAC30262.2| unnamed protein produc ( 439) 918 201.9 2.4e-49 gi|59725658|gb|AAW92111.1| dexter [Danio rerio] ( 280) 784 173.7 4.9e-41 gi|59725586|gb|AAW92108.1| leftover/righton-like 1 ( 285) 759 168.4 1.9e-39 gi|190338278|gb|AAI63138.1| Potassium channel tetr ( 285) 758 168.2 2.2e-39 gi|190337518|gb|AAI63117.1| Potassium channel tetr ( 285) 758 168.2 2.2e-39 gi|62202197|gb|AAH92820.1| Potassium channel tetra ( 281) 755 167.6 3.3e-39 gi|59725611|gb|AAW92109.1| leftover/righton-like 2 ( 281) 751 166.7 5.9e-39 gi|12838663|dbj|BAB24283.1| unnamed protein produc ( 111) 717 159.3 4.2e-37 >>gi|114149938|sp|Q5DTY9.2|KCD16_MOUSE RecName: Full=BTB (427 aa) initn: 2874 init1: 2874 opt: 2874 Z-score: 3259.6 bits: 612.2 E(): 7.4e-173 Smith-Waterman score: 2874; 100.000% identity (100.000% similar) in 418 aa overlap (1-418:10-427) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKG 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 ESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMRR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 KSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSE 370 380 390 400 410 420 mKIAA1 LLRKYHL ::::::: gi|114 LLRKYHL >>gi|109506524|ref|XP_225971.4| PREDICTED: similar to po (427 aa) initn: 2859 init1: 2859 opt: 2859 Z-score: 3242.6 bits: 609.0 E(): 6.6e-172 Smith-Waterman score: 2859; 99.282% identity (100.000% similar) in 418 aa overlap (1-418:10-427) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LLAPEEVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKG 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 ESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMRR :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 ESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQGNIQTLDRPIKKGPVQLIQQSEMRR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 KSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSE :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|109 KSDLLRTLTSGSRESNISSKKKAAKEKVSIEEELEKCIQDFLKIKIPDRFPERKHPWQSE 370 380 390 400 410 420 mKIAA1 LLRKYHL ::::::: gi|109 LLRKYHL >>gi|194219762|ref|XP_001917937.1| PREDICTED: potassium (428 aa) initn: 1990 init1: 1990 opt: 2804 Z-score: 3180.3 bits: 597.5 E(): 2e-168 Smith-Waterman score: 2804; 96.420% identity (99.523% similar) in 419 aa overlap (1-418:10-428) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD ::::.::::::::::::.::::::::::::::::::::::::::::::::: gi|194 MALSGNCSRYYPREQGAAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG ::.::..::::::::::::::::::::::::::::::: ::::::::::::::::.:::: gi|194 LLTPEEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGSCTMGREG 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QTDAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK- ::::::::::::::::::.::::.::::::::::::::::::::::::::::::::::: gi|194 SECGFHMVACNSSVTASFLNQYTDDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKE 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMR ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|194 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQLIQQSEMR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 RKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS :::::::::::::::::.::::::.:::::.::::::::::::::::::::::::::::: gi|194 RKSDLLRTLTSGSRESNMSSKKKAVKEKLSVEEELEKCIQDFLKIKIPDRFPERKHPWQS 370 380 390 400 410 420 mKIAA1 ELLRKYHL :::::::: gi|194 ELLRKYHL >>gi|109079149|ref|XP_001098121.1| PREDICTED: similar to (428 aa) initn: 1982 init1: 1982 opt: 2797 Z-score: 3172.3 bits: 596.0 E(): 5.4e-168 Smith-Waterman score: 2797; 96.181% identity (99.284% similar) in 419 aa overlap (1-418:10-428) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD ::::.::::::::::::.::::::::::::::::::::::.:::::::::: gi|109 MALSGNCSRYYPREQGAAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSFLWKMFSPKRD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|109 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG ::.:...::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|109 LLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPTDRKWGFITVGYRGSCTLGREG 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK- ::::::::::::::::::.::::.:::::::::::::::::::: :::::::::::::: gi|109 SECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKE 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMR ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQLIQQSEMR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 RKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS :::::::::::::::::.::::::.::::::::::::::::::::::::::::::::::: gi|109 RKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS 370 380 390 400 410 420 mKIAA1 ELLRKYHL :::::::: gi|109 ELLRKYHL >>gi|74708941|sp|Q68DU8.1|KCD16_HUMAN RecName: Full=BTB/ (428 aa) initn: 1982 init1: 1982 opt: 2797 Z-score: 3172.3 bits: 596.0 E(): 5.4e-168 Smith-Waterman score: 2797; 96.181% identity (99.284% similar) in 419 aa overlap (1-418:10-428) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD ::::.::.:::::::::.::::::::::::::::::::::::::::::::: gi|747 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|747 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG ::.:...::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|747 LLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGSCTLGREG 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK- ::::::::::::::::::.::::.:::::::::::::::::::: :::::::::::::: gi|747 SECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKE 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMR ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|747 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQLIQQSEMR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 RKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS :::::::::::::::::.::::::.::::::::::::::::::::::::::::::::::: gi|747 RKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS 370 380 390 400 410 420 mKIAA1 ELLRKYHL :::::::: gi|747 ELLRKYHL >>gi|158258391|dbj|BAF85166.1| unnamed protein product [ (428 aa) initn: 1982 init1: 1982 opt: 2786 Z-score: 3159.9 bits: 593.7 E(): 2.7e-167 Smith-Waterman score: 2786; 95.943% identity (99.045% similar) in 419 aa overlap (1-418:10-428) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD ::::.::.:::::::::.::::::::::::::::::::::::::::::::: gi|158 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|158 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG ::.:...::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|158 LLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGSCTLGREG 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK- ::::::::::::::::::.::::.:::::::::::::::::::: :::::::::::::: gi|158 SECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKE 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMR :::::::::::::::::::::::::::::::::: :.::::::::::::::::::::::: gi|158 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTCQTNIQTLDRPIKKGPVQLIQQSEMR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 RKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS :::::::::::::::::.::::::.::::::::::::::::::::::::::::::::::: gi|158 RKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS 370 380 390 400 410 420 mKIAA1 ELLRKYHL :::::::: gi|158 ELLRKYHL >>gi|73949558|ref|XP_544324.2| PREDICTED: similar to pot (428 aa) initn: 1954 init1: 1954 opt: 2769 Z-score: 3140.6 bits: 590.1 E(): 3.2e-166 Smith-Waterman score: 2769; 95.465% identity (98.807% similar) in 419 aa overlap (1-418:10-428) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD :: :.::::::::::::.::::::::::::::::::::::::::::::::: gi|739 MALSGNCSRYYSREQGAAVPNSFPEVMELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 TANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREG ::.:...::::::::::::::::::::::::::::.:: ::::::::::::::::.:::: gi|739 LLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSVLPADRKWGFITVGYRGSCTMGREG 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDML 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK- :::::::::::::::::::::::.:::::::::::::::::::: :::::::::. ::: gi|739 SECGFHMVACNSSVTASFVNQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNATGDKE 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEMR ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQLIQQSEMR 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 RKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS :::::::::::::::::.::::::.::::::::::::::::::::::::::::::::::: gi|739 RKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQS 370 380 390 400 410 420 mKIAA1 ELLRKYHL :::::::: gi|739 ELLRKYHL >>gi|126290530|ref|XP_001369046.1| PREDICTED: hypothetic (427 aa) initn: 2222 init1: 2222 opt: 2727 Z-score: 3093.0 bits: 581.3 E(): 1.4e-163 Smith-Waterman score: 2727; 94.511% identity (98.091% similar) in 419 aa overlap (1-418:11-427) 10 20 30 40 50 mKIAA1 YYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKR : ..::. ::::::::.::::::::::::::::.::::::::::::::: gi|126 MALSGNCRSYYLSKEQGT-VPNSFPEVVELNVGGQVYFTRHSTLVSIPHSLLWKMFSPKR 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 DTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 DTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLV 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 KLLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGRE :::.:...::::::.::::::: :::::::::::::::: ::::::::::::::::.::: gi|126 KLLTPDEIKQSPDEYCHSDFEDMSQGSDTRICPPSSLLPADRKWGFITVGYRGSCTMGRE 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 GQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 GQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDM 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 LSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|126 LSECGFHMVACNSSVTASFVNQYTDDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK 240 250 260 270 280 290 300 310 320 330 340 mKIAA1 -GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEM ::::::::.::::::::::::::::::::::::::: :::::::::::::::::::::: gi|126 EGESGTSCNELSTSSCDSQSEASSPQETVICGPVTRQPNIQTLDRPIKKGPVQLIQQSEM 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA1 RRKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQ :::::::::::.:::::: ::::::.:::::::::::::::::::::::::::::::::: gi|126 RRKSDLLRTLTTGSRESN-SSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQ 360 370 380 390 400 410 410 mKIAA1 SELLRKYHL ::::::::: gi|126 SELLRKYHL 420 >>gi|118097646|ref|XP_425217.2| PREDICTED: hypothetical (427 aa) initn: 2121 init1: 2121 opt: 2586 Z-score: 2933.2 bits: 551.8 E(): 1.1e-154 Smith-Waterman score: 2586; 88.333% identity (96.905% similar) in 420 aa overlap (1-418:10-427) 10 20 30 40 50 mKIAA1 YYP-RDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKR : : :.::... .:::::.::::::::::::::::.. :::::::::.::: gi|118 MALSGNCRTYLPAREQGSGL-QSFPEVVELNVGGQVYFTRHSTLVGTPHSLLWKMFTPKR 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 DTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLV ::::::::::::::::::::::::::::::::.::::::::::.:::::::::::::::: gi|118 DTANDLAKDSKGRFFIDRDGFLFRYILDYLRDKQVVLPDHFPEKGRLKREAEYFQLPDLV 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 KLLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGRE :::.:.: :::::..::::.:..::::::::::: :::: ::::::::.:::::::.::: gi|118 KLLTPDDSKQSPDDYCHSDYEEVSQGSDTRICPPPSLLPSDRKWGFITIGYRGSCTIGRE 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 GQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDM .::::::::::::::::::.:.::::::.::::::::::::::::::::::::::::::: gi|118 SQADAKFRRVPRILVCGRIALVKEVFGESLNESRDPDRAPERYTSRFYLKFKHLERAFDM 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 LSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDK ::::::::::::::::::::::::.::.::::::::::::::::.:::::::::.:::.: gi|118 LSECGFHMVACNSSVTASFVNQYTDDKVWSSYTEYVFYREPSRWASSHCDCCCKDGKGEK 240 250 260 270 280 290 300 310 320 330 340 mKIAA1 -GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLIQQSEM ::::::::.:::::::::::.::::::::::::::: :::::::: ::::: :.:.:: gi|118 EGESGTSCNELSTSSCDSQSEGSSPQETVICGPVTRQPNIQTLDRPAKKGPVLLLQHSES 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA1 RRKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQ :::::::::::::::::. .:::::.:::::::::::::::::::::::::::::::::: gi|118 RRKSDLLRTLTSGSREST-ASKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQ 360 370 380 390 400 410 410 mKIAA1 SELLRKYHL ::::::::: gi|118 SELLRKYHL 420 >>gi|190339664|gb|AAI62772.1| Potassium channel tetramer (423 aa) initn: 2128 init1: 1560 opt: 2152 Z-score: 2441.3 bits: 460.7 E(): 2.8e-127 Smith-Waterman score: 2152; 74.286% identity (90.714% similar) in 420 aa overlap (7-418:5-423) 10 20 30 40 50 mKIAA1 YYPRDQGAAVP--NSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAK : . : .:::.:::::::::::.::..:::. : ::: :.:::: ...::::. gi|190 MALSGNSKPKDSSFPDVIELNVGGQVYYTRYTTLINTPGSLLGKIFSPKNNASNDLAR 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 DSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVKLLAPEDV : :::.:::::::::::.::::::.::::::::::.:::..::::::::::::::.:.:. gi|190 DPKGRYFIDRDGFLFRYVLDYLRDKQVVLPDHFPEKGRLRKEAEYFQLPDLVKLLTPDDL 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 KQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREGQADAKFR : : ::. :::.::.::::: :.::: ::. ::: ::.:::::::::.:::...::::: gi|190 KPSSDEYIHSDYEDGSQGSDQRMCPPPSLILADRKSGFLTVGYRGSCTMGRENRTDAKFR 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 RVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHM :::::..::::.::::::::::::::::::. ..::::::::::::::.:::::::::.: gi|190 RVPRIMICGRIALAKEVFGETLNESRDPDRTADKYTSRFYLKFKHLERSFDMLSECGFQM 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 VACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGD---KGESGT ::::::::::..::.:.:::::::::::::: :::::: :.::::. ::. .::::: gi|190 VACNSSVTASIINQHTDDKIWSSYTEYVFYRGPSRWSSPPCECCCKGHKGEAEGEGESGT 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 SCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQLI---QQSEMRRK : :.::::: .:.::::::: :::::::.::...:::::: :::::: . :::: ::: gi|190 SFNELSTSSSESHSEASSPQGTVICGPVSRQTHVQTLDRPPKKGPVQHLLQQQQSEHRRK 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 SDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSEL ::::::::..::... . ::. ::::::.::::::::::: :::::..:::::. ::..: gi|190 SDLLRTLTASSRDTS-TCKKRPAKEKLSVEEELEKCIQDFRKIKIPEHFPERKYMWQADL 360 370 380 390 400 410 mKIAA1 LRKYHL ::::.: gi|190 LRKYRL 420 418 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 17:18:09 2009 done: Fri Mar 13 17:24:41 2009 Total Scan time: 887.540 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]