# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbp01112.fasta.nr -Q ../query/mKIAA0110.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0110, 283 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920927 sequences Expectation_n fit: rho(ln(x))= 5.0041+/-0.000187; mu= 10.4400+/- 0.010 mean_var=70.2797+/-13.735, 0's: 31 Z-trim: 35 B-trim: 773 in 1/65 Lambda= 0.152989 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|13543201|gb|AAH05768.1| MAD2L1 binding protein ( 276) 1915 431.2 9.4e-119 gi|46577120|sp|Q9DCX1.2|MD2BP_MOUSE RecName: Full= ( 276) 1910 430.1 2e-118 gi|12832315|dbj|BAB22054.1| unnamed protein produc ( 276) 1895 426.8 2e-117 gi|56971334|gb|AAH88268.1| MAD2L1 binding protein ( 277) 1736 391.7 7.4e-107 gi|73973004|ref|XP_532151.2| PREDICTED: similar to ( 274) 1457 330.2 2.5e-88 gi|149732230|ref|XP_001502188.1| PREDICTED: simila ( 274) 1457 330.2 2.5e-88 gi|109071293|ref|XP_001096335.1| PREDICTED: MAD2L1 ( 274) 1454 329.5 4e-88 gi|114607564|ref|XP_518498.2| PREDICTED: MAD2L1 bi ( 274) 1426 323.3 2.9e-86 gi|194386202|dbj|BAG59665.1| unnamed protein produ ( 293) 1426 323.3 3e-86 gi|48145903|emb|CAG33174.1| MAD2L1BP [Homo sapiens ( 274) 1423 322.7 4.6e-86 gi|194039367|ref|XP_001929550.1| PREDICTED: simila ( 274) 1410 319.8 3.3e-85 gi|109939826|gb|AAI18447.1| MAD2L1 binding protein ( 274) 1405 318.7 7.2e-85 gi|51243063|ref|NP_001003690.1| MAD2L1 binding pro ( 306) 1402 318.1 1.2e-84 gi|114607562|ref|XP_001139524.1| PREDICTED: MAD2L1 ( 306) 1401 317.8 1.4e-84 gi|12846893|dbj|BAB27350.1| unnamed protein produc ( 276) 1349 306.3 3.8e-81 gi|166235394|pdb|2QYF|B Chain B, Crystal Structure ( 240) 1301 295.7 5.3e-78 gi|126310090|ref|XP_001366235.1| PREDICTED: hypoth ( 283) 1135 259.1 6.4e-67 gi|149599701|ref|XP_001514387.1| PREDICTED: hypoth ( 325) 1033 236.6 4.3e-60 gi|50740573|ref|XP_419498.1| PREDICTED: hypothetic ( 275) 903 207.9 1.6e-51 gi|224047711|ref|XP_002191936.1| PREDICTED: hypoth ( 381) 821 189.9 5.9e-46 gi|189527416|ref|XP_001923296.1| PREDICTED: simila ( 385) 614 144.2 3.4e-32 gi|210085758|gb|EEA34209.1| hypothetical protein B ( 239) 559 131.9 1.1e-28 gi|210122172|gb|EEA69880.1| hypothetical protein B ( 237) 554 130.8 2.2e-28 gi|115891477|ref|XP_001199216.1| PREDICTED: simila ( 161) 315 77.9 1.3e-12 gi|156227729|gb|EDO48531.1| predicted protein [Nem ( 252) 248 63.3 5e-08 gi|190589854|gb|EDV29876.1| predicted protein [Tri ( 251) 176 47.4 0.0031 >>gi|13543201|gb|AAH05768.1| MAD2L1 binding protein [Mus (276 aa) initn: 1915 init1: 1915 opt: 1915 Z-score: 2288.3 bits: 431.2 E(): 9.4e-119 Smith-Waterman score: 1915; 100.000% identity (100.000% similar) in 276 aa overlap (8-283:1-276) 10 20 30 40 50 60 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDLETVIPPAQEPSNPAEPF ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 MAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDLETVIPPAQEPSNPAEPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 CPRDLVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRKAPQAEDTARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 CPRDLVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRKAPQAEDTARK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 KAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 KAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQPKLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 LAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQPKLN 180 190 200 210 220 230 250 260 270 280 mKIAA0 YRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE ::::::::::::::::::::::::::::::::::::::::::: gi|135 YRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE 240 250 260 270 >>gi|46577120|sp|Q9DCX1.2|MD2BP_MOUSE RecName: Full=MAD2 (276 aa) initn: 1910 init1: 1910 opt: 1910 Z-score: 2282.3 bits: 430.1 E(): 2e-118 Smith-Waterman score: 1910; 99.638% identity (100.000% similar) in 276 aa overlap (8-283:1-276) 10 20 30 40 50 60 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDLETVIPPAQEPSNPAEPF ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 MAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDLETVIPPAQEPSNPAEPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 CPRDLVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRKAPQAEDTARK ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|465 CPRDLVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRKVPQAEDTARK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 KAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 KAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQPKLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 LAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQPKLN 180 190 200 210 220 230 250 260 270 280 mKIAA0 YRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE ::::::::::::::::::::::::::::::::::::::::::: gi|465 YRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE 240 250 260 270 >>gi|12832315|dbj|BAB22054.1| unnamed protein product [M (276 aa) initn: 1895 init1: 1895 opt: 1895 Z-score: 2264.4 bits: 426.8 E(): 2e-117 Smith-Waterman score: 1895; 98.913% identity (99.638% similar) in 276 aa overlap (8-283:1-276) 10 20 30 40 50 60 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDLETVIPPAQEPSNPAEPF ::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|128 MAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDLETVIPPAQEPSNPADAF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 CPRDLVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRKAPQAEDTARK ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|128 CPRDLVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRKVPQAEDTARK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 KAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQPKLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQPKLN 180 190 200 210 220 230 250 260 270 280 mKIAA0 YRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE ::::::::::::::::::::::::::::::::::::::::::: gi|128 YRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE 240 250 260 270 >>gi|56971334|gb|AAH88268.1| MAD2L1 binding protein [Rat (277 aa) initn: 1103 init1: 1103 opt: 1736 Z-score: 2074.8 bits: 391.7 E(): 7.4e-107 Smith-Waterman score: 1736; 91.697% identity (96.390% similar) in 277 aa overlap (8-283:1-277) 10 20 30 40 50 60 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDLETVIPPAQEPSNPAEPF :::::.:: ::::::::::::: ::::::.:: :::::::::.::::: .::: gi|569 MAASGQEDRSELSPAAAPNLDWTEKPEETRAPGVDLETVIPPVQEPSNSVEPF 10 20 30 40 50 70 80 90 100 110 mKIAA0 CPRDLVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRKA-PQAEDTAR ::::::::::::::::: ::::::::::::.:::.:::::::::::::.:. :::::::: gi|569 CPRDLVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYQKSSPQAEDTAR 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 KKAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLS :: :.::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|569 KKPRLTTEASNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELDLS 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 RLAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQPKL :::::.::::::::::::.::::::::: :::::.:::::::::::::::::::::.::: gi|569 RLAPFSVDQGLNTAACLRHLFRAIFLADAFSELQAPPLMGTIVMVQGHRDCGEDWFRPKL 180 190 200 210 220 230 240 250 260 270 280 mKIAA0 NYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE :::::::::::::::::::::::::::::::::::::::::::: gi|569 NYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE 240 250 260 270 >>gi|73973004|ref|XP_532151.2| PREDICTED: similar to MAD (274 aa) initn: 970 init1: 970 opt: 1457 Z-score: 1742.0 bits: 330.2 E(): 2.5e-88 Smith-Waterman score: 1457; 77.419% identity (89.964% similar) in 279 aa overlap (8-283:1-274) 10 20 30 40 50 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDL-ETVIPPAQEPSNPAEP ::: : : : :::.:.:.:::: ::::::...: ::. .::: ::.:: gi|739 MAAPGPE---VLCPAAVPDLEWYEKSEETHAPQIELLETT--STQEPPNPSEP 10 20 30 40 60 70 80 90 100 110 mKIAA0 FCPRD-LVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRK-APQAEDT : ::. .:::::::::::: ::.:::::::::.:::.::::::::::::::: .:::::. gi|739 FYPRNCMVPVVFPGPVSQEGCCRFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEDA 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 ARKKAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELD .::: :.: .:::::::::::::::::. .:::::::.:::::::.::::::::::: gi|739 MKKKARAAAEMSSRKCQQALAELESVLSHLEGLFARTLVPRVLILLGGSALSPKEFYELD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 LSRLAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQP :::::: ..::.:.:::::::::::::.:: :::::.:::::::::.:::::::::::.: gi|739 LSRLAPNSMDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTIVMAQGHRDCGEDWFRP 170 180 190 200 210 220 240 250 260 270 280 mKIAA0 KLNYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE :::::::.::::::::::::: :.:. : :::.::::::::::::: gi|739 KLNYRVPNRGHKLTVTLSCGRSSIPTTAWEDYVWFQAPVTLKGFHE 230 240 250 260 270 >>gi|149732230|ref|XP_001502188.1| PREDICTED: similar to (274 aa) initn: 956 init1: 956 opt: 1457 Z-score: 1742.0 bits: 330.2 E(): 2.5e-88 Smith-Waterman score: 1457; 78.731% identity (92.164% similar) in 268 aa overlap (19-283:9-274) 10 20 30 40 50 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDL-ETVIPPAQEPSNPAEP :::::.:.:.:::: ::::::...: ::. : .: ::.:: gi|149 MAAPEPEVLSPAAVPDLEWYEKSEETHAPQIELLETTSAP--QPPNPSEP 10 20 30 40 60 70 80 90 100 110 mKIAA0 FCPRD-LVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRK-APQAEDT ::::: .:::::::::::: ::.:::::::::.:::.::::::::::::::: .:::::. gi|149 FCPRDCMVPVVFPGPVSQEGCCRFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEDV 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 ARKKAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELD ..:: ... .:::::::::::::.:::. .:::::::.:::::::.:.::::::::: gi|149 VKKKPRATADMGSRKCQQALAELESVFSHLEGLFARTLVPRVLILLGGSAVSPKEFYELD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 LSRLAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQP :::::: ..::.:.:::::::::::::.:: :::::.:::::::::.:::::::::::.: gi|149 LSRLAPNSMDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTIVMAQGHRDCGEDWFRP 170 180 190 200 210 220 240 250 260 270 280 mKIAA0 KLNYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE ::::::::::::::::::::: :.:: : ::::::::::::::::: gi|149 KLNYRVPSRGHKLTVTLSCGRASIPATAWEDYIWFQAPVTLKGFHE 230 240 250 260 270 >>gi|109071293|ref|XP_001096335.1| PREDICTED: MAD2L1 bin (274 aa) initn: 1350 init1: 965 opt: 1454 Z-score: 1738.4 bits: 329.5 E(): 4e-88 Smith-Waterman score: 1454; 79.104% identity (91.791% similar) in 268 aa overlap (19-283:9-274) 10 20 30 40 50 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDL-ETVIPPAQEPSNPAEP ::::..:.:.:::: ::::: ...: :: .::: ::.:: gi|109 MAAPEAEVLSPASVPDLEWYEKSEETHASQIELLET--SSTQEPLNPSEP 10 20 30 40 60 70 80 90 100 110 mKIAA0 FCPRD-LVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRK-APQAEDT ::::: .:::::::::::: ::::::::::::.:::.::::::::::.:::: .::::. gi|109 FCPRDCIVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKNFYRKPSPQAEEM 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 ARKKAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELD .:: .::. .::::::.::::::::::.:::::::::.::::::::.:::::::::: gi|109 LKKKPRATTEVSSRKCQQAVAELESVLSHLEDFFARTLVPRVLILLGGNSLSPKEFYELD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 LSRLAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQP :: :::..:::.:.:::::::::::::.:: :::::.:::::::.:.::::::::::::: gi|109 LSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTIIMAQGHRDCGEDWFQP 170 180 190 200 210 220 240 250 260 270 280 mKIAA0 KLNYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE :::::::::::::::::::::::. . : :::::::::::::::.: gi|109 KLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTLKGFRE 230 240 250 260 270 >>gi|114607564|ref|XP_518498.2| PREDICTED: MAD2L1 bindin (274 aa) initn: 1344 init1: 961 opt: 1426 Z-score: 1705.0 bits: 323.3 E(): 2.9e-86 Smith-Waterman score: 1426; 78.358% identity (90.299% similar) in 268 aa overlap (19-283:9-274) 10 20 30 40 50 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDL-ETVIPPAQEPSNPAEP :: ::.:.:.:.:: ::::: ...: :: ::: : .: gi|114 MAAPEAEVLSSAAVPDLEWFEKSEETHASQIELLET--SSMQEPLNASEA 10 20 30 40 60 70 80 90 100 110 mKIAA0 FCPRD-LVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRK-APQAEDT ::::: .:::::::::::: ::::::::::::.:::.::::::::::::::: .::::. gi|114 FCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEM 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 ARKKAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELD .:: .::. .:::::::::::::::::.:::::::::.::::::::::::::::::: gi|114 LKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 LSRLAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQP :: :::..:::.:.:::::::::::::.:: :::::.::::::.::.::::.::::::.: gi|114 LSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRP 170 180 190 200 210 220 240 250 260 270 280 mKIAA0 KLNYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE :::::::::::::::::::::::. . : :::::::::::::::.: gi|114 KLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTLKGFRE 230 240 250 260 270 >>gi|194386202|dbj|BAG59665.1| unnamed protein product [ (293 aa) initn: 1363 init1: 952 opt: 1426 Z-score: 1704.6 bits: 323.3 E(): 3e-86 Smith-Waterman score: 1426; 76.157% identity (88.612% similar) in 281 aa overlap (6-283:18-293) 10 20 30 40 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDL-ETVI :.::: : :: ::.:.:.:::: ::::: ...: :: gi|194 MMPRETFILTARSSGGEVVMAAPEAE---VLSSAAVPDLEWYEKSEETHASQIELLET-- 10 20 30 40 50 50 60 70 80 90 100 mKIAA0 PPAQEPSNPAEPFCPRD-LVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKH .::: : .: ::::: .:::::::::::: ::::::::::::.:::.::::::::::: gi|194 SSTQEPLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKH 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 FYRK-APQAEDTARKKAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGG :::: .::::. .:: .::. .:::::::::::.:::::.:::::::::.::::::: gi|194 FYRKPSPQAEEMLKKKPRATTEVSSRKCQQALAELEGVLSHLEDFFARTLVPRVLILLGG 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 NALSPKEFYELDLSRLAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQ :::::::::::::: :::..:::.:.:::::::::::::.:: :::::.::::::.::.: gi|194 NALSPKEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQ 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 GHRDCGEDWFQPKLNYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE :::.::::::.::::::::::::::::::::::::. . : :::::::::::.:::.: gi|194 GHRNCGEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE 240 250 260 270 280 290 >>gi|48145903|emb|CAG33174.1| MAD2L1BP [Homo sapiens] (274 aa) initn: 1364 init1: 953 opt: 1423 Z-score: 1701.5 bits: 322.7 E(): 4.6e-86 Smith-Waterman score: 1423; 77.985% identity (90.672% similar) in 268 aa overlap (19-283:9-274) 10 20 30 40 50 mKIAA0 ATRLAVAMAASGEEDMSELSPAAAPNLDWYEKPEETHAPEVDL-ETVIPPAQEPSNPAEP :: ::.:.:.:::: ::::: ...: :: .::: : .: gi|481 MAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLET--SSTQEPLNASEA 10 20 30 40 60 70 80 90 100 110 mKIAA0 FCPRD-LVPVVFPGPVSQEDCCQFTCELLKHILYQRHQLPLPYEQLKHFYRK-APQAEDT ::::: .:::::::::::: ::::::::::::.:::.::::::::::::::: .::::. gi|481 FCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEM 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 ARKKAWLATEARNRKCQQALAELESVLSHLRDFFARTLVPQVLILLGGNALSPKEFYELD .:: .::. .:::::::::::::::::.:::::::::.::::::::::::::::::: gi|481 LKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 LSRLAPFGVDQGLNTAACLRRLFRAIFLADPFSELQTPPLMGTIVMVQGHRDCGEDWFQP :: :::..:::.:.:::::::::::::.:: :::::.::::::.::.::::.::::::.: gi|481 LSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRP 170 180 190 200 210 220 240 250 260 270 280 mKIAA0 KLNYRVPSRGHKLTVTLSCGRPSVPAMASEDYIWFQAPVTLKGFHE :::::::::::::::::::::::. . : :::::::::::.:::.. gi|481 KLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRD 230 240 250 260 270 283 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:12:49 2009 done: Thu Mar 12 22:18:24 2009 Total Scan time: 777.450 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]