Comparison of KIAA cDNA sequences between mouse and human (KIAA0110)
<<Original sequence data>>
mouse mKIAA0110 (mbp01112) length: 920 bp, CDS: 3 - 854
human KIAA0110 (ha00666) length: 1233 bp, CDS: 1 - 828
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 21 - 863 664 160 19.4
3'UTR: 864 - 1102 47 22 31.9
amino acid
CDS: 21 - 863 214 62 22.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
A M A A S G E E D
mbp01112 1 GAGCGACTAGGCTGGCAGTCGCGATGGCTGCGTCCGGTGAGGAGGATATG 50
| |||||| ||| | | | ||||| |
ha00666 1 ....................GTGATGGCGGCGCCGGAGGCGGAGGTT... 27
V M A A P E A E V
51 ----+----*----+----*----+----*----+----*----+----* 100
L S P A A A P N L D W Y E K P
mbp01112 51 TCCGAACTGTCCCCTGCTGCTGCCCCAAATTTGGATTGGTATGAGAAGCC 100
|||||| | || || | ||| ||||||| |||||||||||| |
ha00666 28 ......CTGTCCTCAGCCGCAGTCCCTGATTTGGAGTGGTATGAGAAGTC 71
L S S A A V P D L E W Y E K S
101 ----+----*----+----*----+----*----+----*----+----* 150
E E T H A P E V - L E T V P
mbp01112 101 GGAAGAAACTCATGCTCCTGAAGTAGA...TCTTGAGACTGTCATCCCGC 147
||||||||||| || | | |||| |||||||| |
ha00666 72 CGAAGAAACTCACGCCTCCCAGATAGAACTACTTGAGACAAGC......T 115
E E T H A S Q I E L L E T S S
151 ----+----*----+----*----+----*----+----*----+----* 200
A Q E P S N P A E P F C P R -
mbp01112 148 CAGCCCAGGAACCTTCCAATCCTGCGGAGCCCTTTTGCCCAAGAGA...C 194
| | ||||||||| ||| || ||||| |||||||||||||||| |
ha00666 116 CTACGCAGGAACCTCTCAACGCTTCGGAGGCCTTTTGCCCAAGAGACTGC 165
T Q E P L N A S E A F C P R D C
201 ----+----*----+----*----+----*----+----*----+----* 250
L V P V V F P G P V S Q E D C C Q
mbp01112 195 CTGGTGCCGGTGGTGTTTCCCGGGCCTGTGAGCCAGGAAGACTGCTGCCA 244
|||| || ||||||||||| ||||||||||||||||||| |||||| ||
ha00666 166 ATGGTACCAGTGGTGTTTCCTGGGCCTGTGAGCCAGGAAGGCTGCTGTCA 215
M V P V V F P G P V S Q E G C C Q
251 ----+----*----+----*----+----*----+----*----+----* 300
F T C E L L K H I L Y Q R H Q L P
mbp01112 245 GTTTACTTGTGAACTTCTCAAGCATATCCTGTACCAGCGCCATCAGCTCC 294
|||||||||||||||||| ||||||||| |||| || ||||| |||||||
ha00666 216 GTTTACTTGTGAACTTCTAAAGCATATCATGTATCAACGCCAGCAGCTCC 265
F T C E L L K H I M Y Q R Q Q L P
301 ----+----*----+----*----+----*----+----*----+----* 350
L P Y E Q L K H F Y R K A P Q
mbp01112 295 CTCTGCCCTATGAACAGCTGAAGCACTTCTACCGGAAA...GCTCCCCAG 341
||||||||||||||||||| |||||||| ||||| ||| ||||||||
ha00666 266 CTCTGCCCTATGAACAGCTTAAGCACTTTTACCGAAAACCTTCTCCCCAG 315
L P Y E Q L K H F Y R K P S P Q
351 ----+----*----+----*----+----*----+----*----+----* 400
A E D T A R K K A W L A T E A R N
mbp01112 342 GCAGAGGACACAGCAAGGAAGAAAGCTTGGCTCGCCACGGAGGCGAGGAA 391
|||||||| | | ||||||| || || | |||| |||| ||| |
ha00666 316 GCAGAGGAGATGCTGAAGAAGAAACCTCGGGCCACCACTGAGGTGAGCAG 365
A E E M L K K K P R A T T E V S S
401 ----+----*----+----*----+----*----+----*----+----* 450
R K C Q Q A L A E L E S V L S H L
mbp01112 392 CAGGAAGTGTCAGCAGGCTTTGGCGGAGCTGGAGAGCGTCCTCAGTCACC 441
|||||| || || || || |||| || |||||||| |||||||| ||||
ha00666 366 CAGGAAATGCCAACAAGCCCTGGCAGAACTGGAGAGTGTCCTCAGCCACC 415
R K C Q Q A L A E L E S V L S H L
451 ----+----*----+----*----+----*----+----*----+----* 500
R D F F A R T L V P Q V L I L L
mbp01112 442 TACGAGACTTCTTTGCCCGGACACTCGTACCACAAGTGTTGATCCTTCTT 491
| ||||||||||| |||||||| ||||| | |||| |||| || |||
ha00666 416 TGGAGGACTTCTTTGCACGGACACTAGTACCGCGAGTGCTGATTCTCCTT 465
E D F F A R T L V P R V L I L L
501 ----+----*----+----*----+----*----+----*----+----* 550
G G N A L S P K E F Y E L D L S R
mbp01112 492 GGAGGCAATGCCCTCAGCCCTAAAGAATTCTATGAACTTGACCTGTCCAG 541
|| ||||||||||| ||||| || || ||||||||||| ||| ||||
ha00666 466 GGGGGCAATGCCCTAAGCCCCAAGGAGTTCTATGAACTCGACTTGTCTCT 515
G G N A L S P K E F Y E L D L S L
551 ----+----*----+----*----+----*----+----*----+----* 600
L A P F G V D Q G L N T A A C L R
mbp01112 542 GCTGGCTCCATTCGGTGTGGACCAGGGCCTGAACACGGCGGCTTGCTTGC 591
|||||| || | | | ||||||||| |||||| ||| || ||||| ||||
ha00666 516 GCTGGCCCCCTACAGCGTGGACCAGAGCCTGAGCACAGCAGCTTGTTTGC 565
L A P Y S V D Q S L S T A A C L R
601 ----+----*----+----*----+----*----+----*----+----* 650
R L F R A I F L A D P F S E L Q
mbp01112 592 GTCGTCTCTTCAGAGCCATCTTCTTGGCGGATCCATTTAGCGAACTGCAG 641
| ||||||||| ||||||| ||| |||| ||| | |||||||| || |||
ha00666 566 GCCGTCTCTTCCGAGCCATATTCATGGCTGATGCCTTTAGCGAGCTTCAG 615
R L F R A I F M A D A F S E L Q
651 ----+----*----+----*----+----*----+----*----+----* 700
T P P L M G T I V M V Q G H R D C
mbp01112 642 ACTCCCCCGCTCATGGGTACCATTGTCATGGTTCAGGGCCACCGTGACTG 691
|||| || |||||||| ||| | ||||||| ||||| ||||| ||||
ha00666 616 GCTCCTCCACTCATGGGCACCGTCGTCATGGCACAGGGACACCGCAACTG 665
A P P L M G T V V M A Q G H R N C
701 ----+----*----+----*----+----*----+----*----+----* 750
G E D W F Q P K L N Y R V P S R G
mbp01112 692 TGGAGAAGATTGGTTTCAACCGAAACTGAACTACCGGGTGCCCAGCCGGG 741
||||||||||||||||| ||| || || ||||| || |||||||||||||
ha00666 666 TGGAGAAGATTGGTTTCGACCCAAGCTCAACTATCGAGTGCCCAGCCGGG 715
G E D W F R P K L N Y R V P S R G
751 ----+----*----+----*----+----*----+----*----+----* 800
H K L T V T L S C G R P S V P A
mbp01112 742 GCCACAAACTCACCGTGACACTGTCATGTGGCAGACCTTCCGTCCCAGCC 791
|||| ||||| || ||||| ||||||||||||||||||||| ||| | ||
ha00666 716 GCCATAAACTGACTGTGACCCTGTCATGTGGCAGACCTTCCATCCGAACC 765
H K L T V T L S C G R P S I R T
801 ----+----*----+----*----+----*----+----*----+----* 850
M A S E D Y I W F Q A P V T L K G
mbp01112 792 ATGGCTTCAGAGGATTACATTTGGTTCCAGGCACCGGTGACACTTAAAGG 841
| ||||| || || |||||||||||||||||||| |||||| |||||||
ha00666 766 ACGGCTTGGGAAGACTACATTTGGTTCCAGGCACCAGTGACATTTAAAGG 815
T A W E D Y I W F Q A P V T F K G
851 ----+----*----+----*----+----*----+----*----+----* 900
F H E *
mbp01112 842 TTTTCATGAGTGAAGG...............TATAAGGACAATGGCTGAA 876
|| | ||||||| | || || ||||||||||||
ha00666 816 CTTCCGCGAGTGAATGAGTGCTTCTTAATCCTAAAAACACAATGGCTGAA 865
F R E *
901 ----+----*----+----*----+----*----+----*----+----* 950
mbp01112 877 T..TCTCTCCCCTTCTCATGCTAGGGCACCCATC................ 908
| ||| || || | | ||| ||||||||
ha00666 866 TTATCTTTCTCCATGTGGCGCTGAATCACCCATCTGGTTTGGAGCTAGAG 915
951 ----+----*----+----*----+----*----+----*----+----* 1000
mbp01112 909 .................................................. 909
ha00666 916 TTGCTTCCTGGTGAGAGAGGAAGCAACTCTCCTTCTGGTTGTCTGCCTCC 965
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mbp01112 909 .................................................. 909
ha00666 966 CCTCAGATTTCCTGATAGGCTGATGGCATGTGGCTGTGACTGTGACTGTA 1015
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mbp01112 909 ........................................TTCCCACTGA 918
|||||| |
ha00666 1016 ATCATTGCTGAACAACATCTCTTTGAATCAAAGGTTGATTTTCCCAGAGG 1065
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mbp01112 919 GG................................................ 920
|
ha00666 1066 GTGCTGGGTCAGGCATTTCTATTAGGAGTTGGAAAGCAAAAATGGGTCCA 1115
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mbp01112 921 .................................................. 921
ha00666 1116 TAGACACTCTATGGAGGTGTCCCTTTCTGCTCTTTGCTGTGTCCTTTCAG 1165
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbp01112 921 .................................................. 921
ha00666 1166 AATTTTTACCAGGAACATAATGTGGATGTGACTTATGAACTTAAATATAA 1215
1251 ----+----*----+--- 1268
mbp01112 921 .................. 921
ha00666 1216 AATAAATAGATTCTTATT 1233