Comparison of KIAA cDNA sequences between mouse and human (FLJ00169)

<< Original sequence data >>

mouse  mFLJ00169 (mbk00979)     length:   1181 bp
human     (sh07709)     length:   5618 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      596       452      144      24.16
  Total:      596       452      144      24.16

amino acid

  CDS1 :      202       148       54      26.73
  Total:      202       148       54      26.73
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse   344 -   970    326 -  1027      7 -   215
         human  4641 -  5249   3999 -  5297    215 -   417
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             7 H  V  G  S  R  K  R  S  R  S  R  S  R  .  S  R  S  22
mbk00979   344 CACGTTGGCTCTCGAAAGCGCTCGAGAAGTCGCAGTCGG...TCCCGTAG 390
               ||  |  | ||| |||||| |   || |  |||   |       |||   
sh07709   4641 CATCTCTGTTCTGGAAAGCCCCTCAGGAAGCGCTCACCCTGTAGCCGGTC 4690
           215 H  L  C  S  G  K  P  L  R  K  R  S  P  C  S  R  S  231

            51 ----+----*----+----*----+----*----+----*----+----* 100
            23  G  R  R  G  S  E  K  R  S  K  R  S  S  K  D  A  S 39
mbk00979   391 TGGTCGGCGAGGGTCAGAAAAGCGAAGTAAGAGGAGTAGCAAGGATGCCT 440
               ||  |            | |   |  |    |||  || |          
sh07709   4691 TGTGCCTGCCCCAGGCCAGAGCAGGGGACGAAGGTTTACC.......... 4730
           232  V  P  A  P  G  Q  S  R  G  R  R  F  T  .  .  .  . 244

           101 ----+----*----+----*----+----*----+----*----+----* 150
            40   R  N  C  S  A  S  R  S  Q  G  H  K  A  G  S  A   55
mbk00979   441 CGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCC 490
                                ||     | |  ||||     ||        | 
sh07709   4731 .................TCTTCCCCTCCTGGCCTTCCAGCCTCACCTTCT 4763
           245   .  .  .  .  .  S  S  P  P  G  L  P  A  S  P  S   255

           151 ----+----*----+----*----+----*----+----*----+----* 200
            56 S  G  V  E  E  R  S  K  H  K  A  Q  R  T  S  R  S  72
mbk00979   491 TCCGGGGTTGAGGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATC 540
                || |  |    |||||||||||||| ||||||| ||||| | |  ||||
sh07709   4764 CCCTGCATCACAGAGAGAAGCAAGCAGAAGGCCCGGAGGAGAACAAGATC 4813
           256 P  C  I  T  E  R  S  K  Q  K  A  R  R  R  T  R  S  272

           201 ----+----*----+----*----+----*----+----*----+----* 250
            73  S  S  T  S  S  S  S  S  S  S  S  S  A  S  S  S  S 89
mbk00979   541 CAGTTCAACCTCCTCCTCTTCCAGTTCTTCTAGCTCCGCCTCGTCCTCAT 590
               ||| ||  ||||||| ||||||||||||||||||||| | || ||||| |
sh07709   4814 CAGCTCCTCCTCCTCTTCTTCCAGTTCTTCTAGCTCCTCTTCTTCCTCCT 4863
           273  S  S  S  S  S  S  S  S  S  S  S  S  S  S  S  S  S 289

           251 ----+----*----+----*----+----*----+----*----+----* 300
            90   S  .  .  .  .  .  S  D  G  R  K  K  R  A  K  H   100
mbk00979   591 CCTCC...............AGTGATGGCCGGAAGAAGCGAGCGAAGCAC 625
               | |||               |||||||||||||||||||| | |||| ||
sh07709   4864 CGTCCTCCTCCTCTTCCTCCAGTGATGGCCGGAAGAAGCGGGGGAAGTAC 4913
           290   S  S  S  S  S  S  S  D  G  R  K  K  R  G  K  Y   305

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 K  E  K  K  R  K  K  K  K  K  K  R  K  K  K  L  K  117
mbk00979   626 AAGGAGAAGAAGAGGAAGAAGAAGAAGAAGAAACGGAAGAAGAAGTTGAA 675
               ||||| |||| ||||||||||||||||||||        |||||| ||||
sh07709   4914 AAGGACAAGAGGAGGAAGAAGAAGAAGAAGAGG......AAGAAGCTGAA 4957
           306 K  D  K  R  R  K  K  K  K  K  R  .  .  K  K  L  K  320

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  K  R  V  K  E  K  A  V  A  V  H  Q  A  E  A  L  P 134
mbk00979   676 GAAGAGAGTCAAGGAGAAGGCAGTGGCGGTGCACCAGGCCGAGGCTCTGC 725
               |||||  | |||||||||||| |  ||    || ||||  ||||||||||
sh07709   4958 GAAGAAGGGCAAGGAGAAGGCGGAAGCA...CAGCAGGTGGAGGCTCTGC 5004
           321  K  K  G  K  E  K  A  E  A  .  Q  Q  V  E  A  L  P 336

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   G  P  S  L  D  Q  W  H  R  S  A  G  E  D  N  D   150
mbk00979   726 CCGGCCCCTCACTGGATCAGTGGCACAGATCAGCTGGGGAGGACAATGAT 775
               | |||||||| ||||| ||||||||| ||||||||||||||||  | |||
sh07709   5005 CGGGCCCCTCGCTGGACCAGTGGCACCGATCAGCTGGGGAGGAAGAGGAT 5054
           337   G  P  S  L  D  Q  W  H  R  S  A  G  E  E  E  D   352

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 G  P  V  L  T  D  E  Q  K  S  R  I  Q  A  M  K  P  167
mbk00979   776 GGCCCAGTCCTGACAGATGAGCAGAAGTCTCGTATCCAGGCCATGAAACC 825
               |||||||||||||| |||||||||||||| || |||||||||||||| ||
sh07709   5055 GGCCCAGTCCTGACGGATGAGCAGAAGTCCCGAATCCAGGCCATGAAGCC 5104
           353 G  P  V  L  T  D  E  Q  K  S  R  I  Q  A  M  K  P  369

           501 ----+----*----+----*----+----*----+----*----+----* 550
           168  M  T  K  E  E  W  D  A  R  Q  S  V  I  R  K  V  V 184
mbk00979   826 CATGACAAAGGAGGAGTGGGATGCCCGACAGAGCGTTATTCGAAAGGTGG 875
               |||||| |||||||||||||||||||| |||||| | || || |||||||
sh07709   5105 CATGACCAAGGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGG 5154
           370  M  T  K  E  E  W  D  A  R  Q  S  I  I  R  K  V  V 386

           551 ----+----*----+----*----+----*----+----*----+----* 600
           185   D  P  E  T  G  R  T  R  L  I  K  G  D  G  E  V   200
mbk00979   876 TGGACCCAGAGACAGGACGCACAAGGCTCATCAAGGGAGACGGCGAGGTT 925
               ||||||| ||||| || ||||| ||||| || |||||||| |||||||| 
sh07709   5155 TGGACCCTGAGACGGGGCGCACCAGGCTTATTAAGGGAGATGGCGAGGTC 5204
           387   D  P  E  T  G  R  T  R  L  I  K  G  D  G  E  V   402

           601 ----+----*----+----*----+----*----+----*----+ 645
           201 L  E  E  I  V  T  K  E  R  H  R  E  I  N  K   215
mbk00979   926 TTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAG 970
                ||||||||||||||||||||||||||||||||||||||||||||
sh07709   5205 CTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAG 5249
           403 L  E  E  I  V  T  K  E  R  H  R  E  I  N  K   417