Comparison of KIAA cDNA sequences between mouse and human (KIAA1293)
<<Original sequence data>>
mouse mKIAA1293 (mbk00773) length: 1187 bp, CDS: 3 - 1133
human KIAA1293 (ha00701) length: 1430 bp, CDS: 112 - 1374
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 159 - 162 2 2 50.0
CDS: 163 - 1376 948 182 16.1
3'UTR: 1377 - 1430 38 16 29.6
amino acid
CDS: 163 - 1376 310 94 23.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mbk00773 1 .................................................. 1
ha00701 1 AGGTGAGAGAGGATGTGTGCTGGGCCTTGGAGGAAGGGGGCCGAGACCGG 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mbk00773 1 .................................................. 1
ha00701 51 GCCTTACTTCTGTAACGATACTGTGAGGCATCGGAAGGCCAGCCTGTTGT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mbk00773 1 .................................................. 1
ha00701 101 GTCCGTTTTGAAGGATGCCCCTGTCCCGCTGGTTGAGATCTGTGGGGGTC 150
R M P L S R W L R S V G V
151 ----+----*----+----*----+----*----+----*----+----* 200
* A A N L G P R E N P -
mbk00773 1 ........GTAAGCCGCAAACATCTTGGACCCCGGGAGAATCCGC..... 37
| |||| | || | ||||||||||| ||
ha00701 151 TTCCTGCTGCCAGCCCCCTAC..TGGGCACCCCGGGAGAGGTGGCTGGGT 198
F L L P A P Y W A P R E R W L G
201 ----+----*----+----*----+----*----+----*----+----* 250
mbk00773 38 .................................................. 38
ha00701 199 TCCCTACGGCGGCCCTCCCTGGTGCACGGGTACCCAGTCCTGGCCTGGCA 248
S L R R P S L V H G Y P V L A W H
251 ----+----*----+----*----+----*----+----*----+----* 300
V E E - R A F S
mbk00773 38 ............................GTTGAAGAAC..AGAGCATTTA 57
|| |||| |||| ||
ha00701 249 CAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGAGCCCTTT 298
S A R C W C Q A W T E E P R A L C
301 ----+----*----+----*----+----*----+----*----+----* 350
S S V R M N G N Q K L D A Y N Q
mbk00773 58 GCTCCTCTGTCAGAATGAATGGGAACCAGAAATTGGATGCTTATAACCAA 107
||||||| |||||||||| || ||||||| | |||| |||| ||||
ha00701 299 GCTCCTCCCTCAGAATGAACGGAGACCAGAATTCAGATGTTTATGCCCAA 348
S S L R M N G D Q N S D V Y A Q
351 ----+----*----+----*----+----*----+----*----+----* 400
E K Q N F I Q H F S Q I V K V L T
mbk00773 108 GAAAAGCAGAATTTCATCCAGCACTTCTCCCAGATCGTCAAGGTGCTGAC 157
||||||||| ||||| | |||||||||||||||||||| | |||||||||
ha00701 349 GAAAAGCAGGATTTCGTTCAGCACTTCTCCCAGATCGTTAGGGTGCTGAC 398
E K Q D F V Q H F S Q I V R V L T
401 ----+----*----+----*----+----*----+----*----+----* 450
E K E L G H P E I G D A I A R L K
mbk00773 158 TGAGAAGGAGCTGGGACACCCAGAGATAGGGGATGCTATTGCCCGGCTCA 207
|||| | ||| |||| |||||||||||||| |||||||||||||||||||
ha00701 399 TGAGGATGAGATGGGGCACCCAGAGATAGGAGATGCTATTGCCCGGCTCA 448
E D E M G H P E I G D A I A R L K
451 ----+----*----+----*----+----*----+----*----+----* 500
E V L E Y N A L G G K Y N R G L
mbk00773 208 AGGAGGTCCTAGAGTACAATGCCTTAGGAGGCAAGTACAACCGGGGTTTG 257
|||||||||| |||||||||||| | ||||||||||| ||||||||||||
ha00701 449 AGGAGGTCCTGGAGTACAATGCCATTGGAGGCAAGTATAACCGGGGTTTG 498
E V L E Y N A I G G K Y N R G L
501 ----+----*----+----*----+----*----+----*----+----* 550
T V V Q A F Q E L V E P K K Q D A
mbk00773 258 ACCGTGGTACAAGCCTTCCAGGAGCTGGTGGAGCCGAAGAAACAGGATGC 307
|| |||||| ||| |||| ||||||||||||||| | ||||||||||||
ha00701 499 ACGGTGGTAGTAGCATTCCGGGAGCTGGTGGAGCCAAGGAAACAGGATGC 548
T V V V A F R E L V E P R K Q D A
551 ----+----*----+----*----+----*----+----*----+----* 600
E S L Q R A L T V G W C V E L L Q
mbk00773 308 TGAGAGTCTTCAGCGGGCCCTGACAGTGGGCTGGTGTGTAGAACTGCTCC 357
||| ||||| ||||||||| ||| |||||||||||||| |||||||| |
ha00701 549 TGATAGTCTCCAGCGGGCCTGGACTGTGGGCTGGTGTGTGGAACTGCTGC 598
D S L Q R A W T V G W C V E L L Q
601 ----+----*----+----*----+----*----+----*----+----* 650
A F F L V S D D I M D S S L T R
mbk00773 358 AGGCTTTCTTCCTTGTGTCAGATGACATCATGGACTCTTCCCTCACTCGC 407
| ||||||||||| ||| |||||||||||||||| || ||||| || |||
ha00701 599 AAGCTTTCTTCCTGGTGGCAGATGACATCATGGATTCATCCCTTACCCGC 648
A F F L V A D D I M D S S L T R
651 ----+----*----+----*----+----*----+----*----+----* 700
R G Q I C W Y Q K P G I G L D A I
mbk00773 408 CGGGGACAGATCTGCTGGTATCAGAAGCCAGGCATAGGCTTGGATGCCAT 457
||||||||||||||||||||||||||||| ||| | || |||||||||||
ha00701 649 CGGGGACAGATCTGCTGGTATCAGAAGCCGGGCGTGGGTTTGGATGCCAT 698
R G Q I C W Y Q K P G V G L D A I
701 ----+----*----+----*----+----*----+----*----+----* 750
N D A L L L E A S I Y R L L K F Y
mbk00773 458 CAACGACGCTCTGCTTCTGGAAGCCTCCATCTATCGTTTGCTGAAGTTCT 507
||| || ||| || |||||||| | ||||| || |||||||| |||
ha00701 699 CAATGATGCTAACCTCCTGGAAGCATGTATCTACCGCCTGCTGAAGCTCT 748
N D A N L L E A C I Y R L L K L Y
751 ----+----*----+----*----+----*----+----*----+----* 800
C R E Q P Y Y L N L L E L F L Q
mbk00773 508 ACTGCAGGGAGCAGCCCTACTACCTGAACCTGCTGGAGCTCTTTCTGCAG 557
| ||| ||||||||||||| |||||||||||| | |||||||| ||||||
ha00701 749 ATTGCCGGGAGCAGCCCTATTACCTGAACCTGATCGAGCTCTTCCTGCAG 798
C R E Q P Y Y L N L I E L F L Q
801 ----+----*----+----*----+----*----+----*----+----* 850
S S Y Q T E I G Q T L D L M T A P
mbk00773 558 AGTTCCTATCAGACAGAGATCGGGCAGACTCTAGACCTCATGACAGCACC 607
|||||||||||||| ||||| |||||||| || |||||| | ||||| ||
ha00701 799 AGTTCCTATCAGACTGAGATTGGGCAGACCCTGGACCTCCTCACAGCCCC 848
S S Y Q T E I G Q T L D L L T A P
851 ----+----*----+----*----+----*----+----*----+----* 900
Q G H V D L G R Y T E K R Y K S I
mbk00773 608 CCAGGGCCATGTGGATCTTGGTAGATACACTGAAAAGAGGTACAAATCGA 657
||||||| |||||||||||| |||| ||||||||||||||||||||| |
ha00701 849 CCAGGGCAATGTGGATCTTGTCAGATTCACTGAAAAGAGGTACAAATCTA 898
Q G N V D L V R F T E K R Y K S I
901 ----+----*----+----*----+----*----+----*----+----* 950
V K Y K T A F Y S F Y L P I A A
mbk00773 658 TTGTCAAGTACAAGACGGCTTTCTACTCTTTCTACCTGCCTATTGCGGCC 707
|||||||||||||||| ||||||||||| |||||||| ||||| || ||
ha00701 899 TTGTCAAGTACAAGACAGCTTTCTACTCCTTCTACCTTCCTATAGCTGCA 948
V K Y K T A F Y S F Y L P I A A
951 ----+----*----+----*----+----*----+----*----+----* 1000
A M Y M A G I D G E K E H A N A L
mbk00773 708 GCCATGTACATGGCAGGCATTGATGGGGAGAAGGAACACGCCAATGCCCT 757
||||||||||||||||| |||||||| |||||||| ||||||||||||
ha00701 949 GCCATGTACATGGCAGGAATTGATGGCGAGAAGGAGCACGCCAATGCCAA 998
A M Y M A G I D G E K E H A N A K
1001 ----+----*----+----*----+----*----+----*----+----* 1050
K I L M E M G E F F Q V Q D D Y L
mbk00773 758 GAAGATCCTGATGGAGATGGGCGAGTTCTTCCAGGTCCAGGACGACTACC 807
|||||||||| |||||||||| |||||||| ||| | ||||| || ||||
ha00701 999 GAAGATCCTGCTGGAGATGGGGGAGTTCTTTCAGATTCAGGATGATTACC 1048
K I L L E M G E F F Q I Q D D Y L
1051 ----+----*----+----*----+----*----+----*----+----* 1100
D L F G D P S V T G K V G T D I
mbk00773 808 TTGATCTCTTTGGAGACCCCAGTGTGACGGGAAAGGTCGGCACTGACATC 857
|||| |||||||| |||||||||||||| || || | ||||||||||||
ha00701 1049 TTGACCTCTTTGGGGACCCCAGTGTGACCGGCAAAATTGGCACTGACATC 1098
D L F G D P S V T G K I G T D I
1101 ----+----*----+----*----+----*----+----*----+----* 1150
Q D N K C S W L V V Q C L L R A S
mbk00773 858 CAGGACAACAAATGCAGCTGGCTGGTGGTTCAGTGTCTGCTACGAGCCTC 907
|||||||||||||||||||||||||||||||||||||||| ||| ||| |
ha00701 1099 CAGGACAACAAATGCAGCTGGCTGGTGGTTCAGTGTCTGCAACGGGCCAC 1148
Q D N K C S W L V V Q C L Q R A T
1151 ----+----*----+----*----+----*----+----*----+----* 1200
P Q Q R Q I L E E N Y G Q K D P E
mbk00773 908 TCCTCAACAGCGCCAGATCTTAGAGGAGAATTATGGGCAGAAGGACCCAG 957
||| ||||| ||||||| | |||| ||||| ||||||||||| | |
ha00701 1149 TCCAGAACAGTACCAGATCCTGAAGGAAAATTACGGGCAGAAGGAGGCTG 1198
P E Q Y Q I L K E N Y G Q K E A E
1201 ----+----*----+----*----+----*----+----*----+----* 1250
K V A R V K A L Y E A L D L Q S
mbk00773 958 AAAAAGTGGCTCGGGTGAAAGCACTGTATGAGGCGCTGGATCTGCAGTCT 1007
| |||||||| |||||||| || || ||||||| ||||||||||| |
ha00701 1199 AGAAAGTGGCCCGGGTGAAGGCGCTATATGAGGAGCTGGATCTGCCAGCA 1248
K V A R V K A L Y E E L D L P A
1251 ----+----*----+----*----+----*----+----*----+----* 1300
A F F K Y E E D S Y N R L K S L I
mbk00773 1008 GCTTTCTTCAAGTATGAGGAAGACAGTTACAACCGCCTCAAGAGTCTCAT 1057
| ||||| | ||||||||||||||||||| || | | | | ||||||
ha00701 1249 GTGTTCTTGCAATATGAGGAAGACAGTTACAGCCACATTATGGCTCTCAT 1298
V F L Q Y E E D S Y S H I M A L I
1301 ----+----*----+----*----+----*----+----*----+----* 1350
E Q C S A P L P P S I F M E L A N
mbk00773 1058 AGAGCAGTGCTCTGCGCCCCTGCCCCCATCCATCTTCATGGAACTTGCAA 1107
|| |||| | | || |||||||||||| || |||| ||| |||||
ha00701 1299 TGAACAGTACGCAGCACCCCTGCCCCCAGCCGTCTTTCTGGGGCTTGCGC 1348
E Q Y A A P L P P A V F L G L A R
1351 ----+----*----+----*----+----*----+----*----+----* 1400
K I Y K R R K *
mbk00773 1108 ACAAGATCTACAAACGGAGAAAGTGACCCCGGAATTGGAGAGGCTGGGAG 1157
||| |||||||| |||||||||||||| | |||| | ||| |||||
ha00701 1349 GCAAAATCTACAAGCGGAGAAAGTGACCTAGAGATTGCAAGGGCGGGGAG 1398
K I Y K R R K *
1401 ----+----*----+----*----+----*--- 1433
mbk00773 1158 GGAGGGGGTCTCAATAAATTATTGTTCAAC... 1187
| | || ||||||||||| || || |||
ha00701 1399 AG.GAGGCTCTCAATAAATAATCGTGTAACCTT 1430