# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbk00729.fasta.nr -Q ../query/mKIAA3027.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA3027, 499 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919794 sequences Expectation_n fit: rho(ln(x))= 5.3876+/-0.000189; mu= 10.3445+/- 0.011 mean_var=89.6893+/-17.085, 0's: 31 Z-trim: 34 B-trim: 129 in 1/65 Lambda= 0.135427 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148672343|gb|EDL04290.1| mCG19745 [Mus musculus ( 633) 3292 653.5 4.8e-185 gi|223462531|gb|AAI51035.1| PDZ domain containing (1014) 3292 653.7 6.8e-185 gi|149267088|ref|XP_001481352.1| PREDICTED: simila (1016) 3292 653.7 6.8e-185 gi|149266793|ref|XP_997312.2| PREDICTED: similar t (1016) 3292 653.7 6.8e-185 gi|74183288|dbj|BAE22566.1| unnamed protein produc ( 735) 3023 601.0 3.5e-169 gi|194377456|dbj|BAG57676.1| unnamed protein produ ( 778) 2859 569.0 1.6e-159 gi|26454783|gb|AAH40922.1| PDZRN4 protein [Homo sa ( 587) 2857 568.5 1.7e-159 gi|194211845|ref|XP_001914717.1| PREDICTED: PDZ do ( 778) 2858 568.8 1.9e-159 gi|114645300|ref|XP_001167840.1| PREDICTED: PDZ do ( 663) 2857 568.5 1.9e-159 gi|52545911|emb|CAE45818.2| hypothetical protein [ ( 669) 2857 568.5 1.9e-159 gi|119578231|gb|EAW57827.1| PDZ domain containing ( 719) 2857 568.5 2e-159 gi|114645298|ref|XP_001167931.1| PREDICTED: PDZ do ( 773) 2857 568.6 2.1e-159 gi|114645294|ref|XP_001167906.1| PREDICTED: hypoth ( 776) 2857 568.6 2.1e-159 gi|119578232|gb|EAW57828.1| PDZ domain containing ( 776) 2857 568.6 2.1e-159 gi|119578233|gb|EAW57829.1| PDZ domain containing ( 778) 2857 568.6 2.1e-159 gi|114645296|ref|XP_522356.2| PREDICTED: PDZ domai ( 778) 2857 568.6 2.1e-159 gi|62739733|gb|AAH93744.1| PDZ domain containing r ( 778) 2857 568.6 2.1e-159 gi|194377588|dbj|BAG57742.1| unnamed protein produ ( 837) 2857 568.6 2.3e-159 gi|114645292|ref|XP_001167876.1| PREDICTED: PDZ do (1036) 2857 568.7 2.6e-159 gi|116242741|sp|Q6ZMN7.3|PZRN4_HUMAN RecName: Full (1036) 2857 568.7 2.6e-159 gi|47077612|dbj|BAD18688.1| unnamed protein produc ( 776) 2852 567.6 4.2e-159 gi|109096175|ref|XP_001089479.1| PREDICTED: PDZ do ( 775) 2841 565.4 1.9e-158 gi|109096173|ref|XP_001089602.1| PREDICTED: PDZ do ( 777) 2841 565.4 1.9e-158 gi|109096171|ref|XP_001089369.1| PREDICTED: PDZ do (1035) 2841 565.6 2.3e-158 gi|194037912|ref|XP_001924655.1| PREDICTED: simila ( 852) 2787 554.9 3e-155 gi|194667124|ref|XP_001789576.1| PREDICTED: simila (1037) 2784 554.4 5.2e-155 gi|118082331|ref|XP_416030.2| PREDICTED: similar t (1145) 2686 535.3 3.2e-149 gi|224093645|ref|XP_002195758.1| PREDICTED: PDZ do (1030) 2682 534.5 5.2e-149 gi|73997153|ref|XP_543731.2| PREDICTED: similar to ( 899) 2678 533.7 8e-149 gi|149608234|ref|XP_001505476.1| PREDICTED: simila ( 763) 2536 505.8 1.6e-140 gi|193787711|dbj|BAG52914.1| unnamed protein produ ( 353) 2097 419.8 6e-115 gi|47227365|emb|CAF96914.1| unnamed protein produc ( 808) 1741 350.5 9.6e-94 gi|125819138|ref|XP_691846.2| PREDICTED: similar t ( 771) 1712 344.9 4.7e-92 gi|125819152|ref|XP_001344551.1| PREDICTED: simila (1053) 1712 345.0 5.9e-92 gi|224066831|ref|XP_002188567.1| PREDICTED: PDZ do ( 821) 1671 336.9 1.3e-89 gi|74008778|ref|XP_853448.1| PREDICTED: similar to ( 762) 1252 255.0 5.3e-65 gi|74008776|ref|XP_867386.1| PREDICTED: similar to ( 784) 1252 255.0 5.4e-65 gi|126342100|ref|XP_001364308.1| PREDICTED: simila ( 768) 1203 245.4 4e-62 gi|126342098|ref|XP_001364230.1| PREDICTED: simila ( 774) 1203 245.4 4.1e-62 gi|21749817|dbj|BAC03666.1| unnamed protein produc ( 765) 1198 244.4 7.9e-62 gi|119593207|gb|EAW72801.1| hCG2004980, isoform CR ( 625) 1189 242.6 2.3e-61 gi|119593204|gb|EAW72798.1| hCG2004980, isoform CR ( 657) 1189 242.6 2.4e-61 gi|219520667|gb|AAI43460.1| Unknown (protein for M ( 660) 1189 242.6 2.4e-61 gi|119593197|gb|EAW72791.1| hCG2004980, isoform CR ( 673) 1189 242.6 2.4e-61 gi|119593208|gb|EAW72802.1| hCG2004980, isoform CR ( 694) 1189 242.6 2.5e-61 gi|62288846|sp|Q76G19.1|PDZD4_HUMAN RecName: Full= ( 769) 1189 242.7 2.7e-61 gi|109658854|gb|AAI17278.1| PDZD4 protein [Homo sa ( 775) 1189 242.7 2.7e-61 gi|109132743|ref|XP_001087147.1| PREDICTED: simila ( 673) 1183 241.4 5.5e-61 gi|193784812|dbj|BAG53965.1| unnamed protein produ ( 694) 1181 241.1 7.4e-61 gi|170649622|gb|ACB21209.1| PDZ domain containing ( 775) 1181 241.1 8e-61 >>gi|148672343|gb|EDL04290.1| mCG19745 [Mus musculus] (633 aa) initn: 3292 init1: 3292 opt: 3292 Z-score: 3478.5 bits: 653.5 E(): 4.8e-185 Smith-Waterman score: 3292; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:135-633) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN :::::::::::::::::::::::::::::: gi|148 ELNSELLEEDHNEGAQRTASELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRTDESLRN 110 120 130 140 150 160 40 50 60 70 80 90 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE 170 180 190 200 210 220 100 110 120 130 140 150 mKIAA3 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH 230 240 250 260 270 280 160 170 180 190 200 210 mKIAA3 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS 290 300 310 320 330 340 220 230 240 250 260 270 mKIAA3 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL 350 360 370 380 390 400 280 290 300 310 320 330 mKIAA3 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ 410 420 430 440 450 460 340 350 360 370 380 390 mKIAA3 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT 470 480 490 500 510 520 400 410 420 430 440 450 mKIAA3 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI 530 540 550 560 570 580 460 470 480 490 mKIAA3 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 590 600 610 620 630 >>gi|223462531|gb|AAI51035.1| PDZ domain containing RING (1014 aa) initn: 3292 init1: 3292 opt: 3292 Z-score: 3475.8 bits: 653.7 E(): 6.8e-185 Smith-Waterman score: 3292; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:516-1014) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN :::::::::::::::::::::::::::::: gi|223 ELNSELLEEDHNEGAQRTASELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRTDESLRN 490 500 510 520 530 540 40 50 60 70 80 90 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE 550 560 570 580 590 600 100 110 120 130 140 150 mKIAA3 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH 610 620 630 640 650 660 160 170 180 190 200 210 mKIAA3 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS 670 680 690 700 710 720 220 230 240 250 260 270 mKIAA3 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL 730 740 750 760 770 780 280 290 300 310 320 330 mKIAA3 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ 790 800 810 820 830 840 340 350 360 370 380 390 mKIAA3 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT 850 860 870 880 890 900 400 410 420 430 440 450 mKIAA3 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI 910 920 930 940 950 960 460 470 480 490 mKIAA3 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 970 980 990 1000 1010 >>gi|149267088|ref|XP_001481352.1| PREDICTED: similar to (1016 aa) initn: 3292 init1: 3292 opt: 3292 Z-score: 3475.8 bits: 653.7 E(): 6.8e-185 Smith-Waterman score: 3292; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:518-1016) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN :::::::::::::::::::::::::::::: gi|149 ELNSELLEEDHNEGAQRTASELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRTDESLRN 490 500 510 520 530 540 40 50 60 70 80 90 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE 550 560 570 580 590 600 100 110 120 130 140 150 mKIAA3 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH 610 620 630 640 650 660 160 170 180 190 200 210 mKIAA3 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS 670 680 690 700 710 720 220 230 240 250 260 270 mKIAA3 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL 730 740 750 760 770 780 280 290 300 310 320 330 mKIAA3 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ 790 800 810 820 830 840 340 350 360 370 380 390 mKIAA3 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT 850 860 870 880 890 900 400 410 420 430 440 450 mKIAA3 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI 910 920 930 940 950 960 460 470 480 490 mKIAA3 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 970 980 990 1000 1010 >>gi|149266793|ref|XP_997312.2| PREDICTED: similar to PD (1016 aa) initn: 3292 init1: 3292 opt: 3292 Z-score: 3475.8 bits: 653.7 E(): 6.8e-185 Smith-Waterman score: 3292; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:518-1016) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN :::::::::::::::::::::::::::::: gi|149 ELNSELLEEDHNEGAQRTASELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRTDESLRN 490 500 510 520 530 540 40 50 60 70 80 90 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE 550 560 570 580 590 600 100 110 120 130 140 150 mKIAA3 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH 610 620 630 640 650 660 160 170 180 190 200 210 mKIAA3 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS 670 680 690 700 710 720 220 230 240 250 260 270 mKIAA3 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL 730 740 750 760 770 780 280 290 300 310 320 330 mKIAA3 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ 790 800 810 820 830 840 340 350 360 370 380 390 mKIAA3 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT 850 860 870 880 890 900 400 410 420 430 440 450 mKIAA3 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI 910 920 930 940 950 960 460 470 480 490 mKIAA3 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 970 980 990 1000 1010 >>gi|74183288|dbj|BAE22566.1| unnamed protein product [M (735 aa) initn: 3023 init1: 3023 opt: 3023 Z-score: 3193.6 bits: 601.0 E(): 3.5e-169 Smith-Waterman score: 3023; 100.000% identity (100.000% similar) in 458 aa overlap (1-458:277-734) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN :::::::::::::::::::::::::::::: gi|741 ELNSELLEEDHNEGAQRTASELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRTDESLRN 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQEVCE 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA3 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIMQAH 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA3 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRS 430 440 450 460 470 480 220 230 240 250 260 270 mKIAA3 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSVESL 490 500 510 520 530 540 280 290 300 310 320 330 mKIAA3 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQ 550 560 570 580 590 600 340 350 360 370 380 390 mKIAA3 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSGMTT 610 620 630 640 650 660 400 410 420 430 440 450 mKIAA3 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKELSI 670 680 690 700 710 720 460 470 480 490 mKIAA3 IELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV :::::::: gi|741 IELSHKKMT 730 >>gi|194377456|dbj|BAG57676.1| unnamed protein product [ (778 aa) initn: 2821 init1: 2409 opt: 2859 Z-score: 3020.1 bits: 569.0 E(): 1.6e-159 Smith-Waterman score: 2859; 87.649% identity (95.618% similar) in 502 aa overlap (1-499:277-778) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN ::::::::::::::.::::::::::::::: gi|194 ELNLEMLEEEHNEAMQPTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRN 250 260 270 280 290 300 40 50 60 70 80 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASN-QEVC :::::::::.:.:.::.:::::.::.:::::::.: : .:: ..:: .:::: .: .: : gi|194 DESSEQENAAEDPNSTSLKSKRDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDC 310 320 330 340 350 360 90 100 110 120 130 140 mKIAA3 EGFQQLLELK--IRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIM : :.:::::: :::::.:::::::::::::.:::.:::::::::::::::::::::::: gi|194 ERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIM 370 380 390 400 410 420 150 160 170 180 190 200 mKIAA3 QAHRLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAES ::::::::::::::::.::::::::::::.:.:::::::::::::::::::::::::::: gi|194 QAHRLQKVTDQYGDIWTLHDGGFRNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAES 430 440 450 460 470 480 210 220 230 240 250 260 mKIAA3 CRSTPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSV ::::::::::::::::::.::::::::::: :.: :: ::..: ::::.:.:..:::. gi|194 CRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSA 490 500 510 520 530 540 270 280 290 300 310 320 mKIAA3 ESLEKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE :: :: ::.:.: :::..:::: ::::::::::::::::::::::::::::::::::::: gi|194 ESKEKVLEGSKLPDQEKAVSEHTPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE 550 560 570 580 590 600 330 340 350 360 370 380 mKIAA3 YAQSQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSG ::::::::::::::::. :::::::::::::::::::::::::::.:::::::::::::: gi|194 YAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSG 610 620 630 640 650 660 390 400 410 420 430 440 mKIAA3 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKE ::::::::::::::::::::::::::::::::::::::::::::: :::::::..::::: gi|194 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKE 670 680 690 700 710 720 450 460 470 480 490 mKIAA3 LSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 INIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 730 740 750 760 770 >>gi|26454783|gb|AAH40922.1| PDZRN4 protein [Homo sapien (587 aa) initn: 2819 init1: 2407 opt: 2857 Z-score: 3019.6 bits: 568.5 E(): 1.7e-159 Smith-Waterman score: 2857; 87.649% identity (95.618% similar) in 502 aa overlap (1-499:86-587) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN ::::::::::::::.::::::::::::::: gi|264 ELNLEMLEEEHNEAMQPTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRN 60 70 80 90 100 110 40 50 60 70 80 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASN-QEVC :::::::::.:.:.::.:::::.::.:::::::.: : .:: ..:: .:::: .: .: : gi|264 DESSEQENAAEDPNSTSLKSKRDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDC 120 130 140 150 160 170 90 100 110 120 130 140 mKIAA3 EGFQQLLELK--IRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIM : :.:::::: :::::.:::::::::::::.:::.:::::::::::::::::::::::: gi|264 ERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIM 180 190 200 210 220 230 150 160 170 180 190 200 mKIAA3 QAHRLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAES ::::::::::::::::.::::::::::::.:.:::::::::::::::::::::::::::: gi|264 QAHRLQKVTDQYGDIWTLHDGGFRNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAES 240 250 260 270 280 290 210 220 230 240 250 260 mKIAA3 CRSTPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSV ::::::::::::::::::.::::::::::: :.: :: ::..: ::::.:.:..:::. gi|264 CRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSA 300 310 320 330 340 350 270 280 290 300 310 320 mKIAA3 ESLEKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE :: :: ::.:.: :::..:::: ::::::::::::::::::::::::::::::::::::: gi|264 ESKEKVLEGSKLPDQEKAVSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE 360 370 380 390 400 410 330 340 350 360 370 380 mKIAA3 YAQSQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSG ::::::::::::::::. :::::::::::::::::::::::::::.:::::::::::::: gi|264 YAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSG 420 430 440 450 460 470 390 400 410 420 430 440 mKIAA3 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKE ::::::::::::::::::::::::::::::::::::::::::::: :::::::..::::: gi|264 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKE 480 490 500 510 520 530 450 460 470 480 490 mKIAA3 LSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 INIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 540 550 560 570 580 >>gi|194211845|ref|XP_001914717.1| PREDICTED: PDZ domain (778 aa) initn: 2820 init1: 2381 opt: 2858 Z-score: 3019.0 bits: 568.8 E(): 1.9e-159 Smith-Waterman score: 2858; 87.450% identity (95.418% similar) in 502 aa overlap (1-499:277-778) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN ::::::::::::::.::::::::::::::: gi|194 ELNLEMLEEQHNEAMQRTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRN 250 260 270 280 290 300 40 50 60 70 80 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASNQ-EVC :::::::::.:.:.::.::::::::.:::::::.: ::.:: ..:: .::::..:: : : gi|194 DESSEQENAAEDPNSTSLKSKRELGHSQDTLGSVELQCNESFVSGEYIDSDCTGNQDEEC 310 320 330 340 350 360 90 100 110 120 130 140 mKIAA3 EGFQQLLELK--IRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIM : :.:::::: :::::.:::::::::::::.:::.:::::::::::::::::::::::: gi|194 ERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIM 370 380 390 400 410 420 150 160 170 180 190 200 mKIAA3 QAHRLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAES :::::::::::::::::::::::::::::.:.::::::::.::::::::::::::::::: gi|194 QAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQRGKLDDIIEHPEKSDKDSSSAYNTAES 430 440 450 460 470 480 210 220 230 240 250 260 mKIAA3 CRSTPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSV :::::::::::::::::::::::::::::: :.: :: ::..: ::::.:.:.. :.. gi|194 CRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAASQSSSGQSSKESTSTKAKTTEQVCGI 490 500 510 520 530 540 270 280 290 300 310 320 mKIAA3 ESLEKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE :. :: ::..: :::.. ::: ::::::::::::::::::::::::::::::::::::: gi|194 EGKEKISESNKLSDQEKAGSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE 550 560 570 580 590 600 330 340 350 360 370 380 mKIAA3 YAQSQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSG ::::::::::::::::. :::::::::::::::::::::::::::.:::::::::::::: gi|194 YAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSG 610 620 630 640 650 660 390 400 410 420 430 440 mKIAA3 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKE ::::::::::::::::::::::::::::::::::::::::::::: :::::::..::::: gi|194 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKE 670 680 690 700 710 720 450 460 470 480 490 mKIAA3 LSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 INIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 730 740 750 760 770 >>gi|114645300|ref|XP_001167840.1| PREDICTED: PDZ domain (663 aa) initn: 2819 init1: 2407 opt: 2857 Z-score: 3018.9 bits: 568.5 E(): 1.9e-159 Smith-Waterman score: 2857; 87.649% identity (95.618% similar) in 502 aa overlap (1-499:162-663) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN ::::::::::::::.::::::::::::::: gi|114 ELNLEMLEEEHNEAMQPTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRN 140 150 160 170 180 190 40 50 60 70 80 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASN-QEVC :::::::::.:.:.::.:::::.::.:::::::.: : .:: ..:: .:::: .: .: : gi|114 DESSEQENAAEDPNSTSLKSKRDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDC 200 210 220 230 240 250 90 100 110 120 130 140 mKIAA3 EGFQQLLELK--IRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIM : :.:::::: :::::.:::::::::::::.:::.:::::::::::::::::::::::: gi|114 ERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIM 260 270 280 290 300 310 150 160 170 180 190 200 mKIAA3 QAHRLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAES ::::::::::::::::.::::::::::::.:.:::::::::::::::::::::::::::: gi|114 QAHRLQKVTDQYGDIWTLHDGGFRNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAES 320 330 340 350 360 370 210 220 230 240 250 260 mKIAA3 CRSTPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSV ::::::::::::::::::.::::::::::: :.: :: ::..: ::::.:.:..:::. gi|114 CRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSA 380 390 400 410 420 430 270 280 290 300 310 320 mKIAA3 ESLEKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE :: :: ::.:.: :::..:::: ::::::::::::::::::::::::::::::::::::: gi|114 ESKEKILEGSKLPDQEKAVSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE 440 450 460 470 480 490 330 340 350 360 370 380 mKIAA3 YAQSQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSG ::::::::::::::::. :::::::::::::::::::::::::::.:::::::::::::: gi|114 YAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSG 500 510 520 530 540 550 390 400 410 420 430 440 mKIAA3 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKE ::::::::::::::::::::::::::::::::::::::::::::: :::::::..::::: gi|114 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKE 560 570 580 590 600 610 450 460 470 480 490 mKIAA3 LSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 INIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 620 630 640 650 660 >>gi|52545911|emb|CAE45818.2| hypothetical protein [Homo (669 aa) initn: 2819 init1: 2407 opt: 2857 Z-score: 3018.8 bits: 568.5 E(): 1.9e-159 Smith-Waterman score: 2857; 87.649% identity (95.618% similar) in 502 aa overlap (1-499:168-669) 10 20 30 mKIAA3 EEGTTDTATSSSNNQEKDSGVGRTDESLRN ::::::::::::::.::::::::::::::: gi|525 ELNLEMLEEEHNEAMQPTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRN 140 150 160 170 180 190 40 50 60 70 80 mKIAA3 DESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASN-QEVC :::::::::.:.:.::.:::::.::.:::::::.: : .:: ..:: .:::: .: .: : gi|525 DESSEQENAAEDPNSTSLKSKRDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDC 200 210 220 230 240 250 90 100 110 120 130 140 mKIAA3 EGFQQLLELK--IRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQNIM : :.:::::: :::::.:::::::::::::.:::.:::::::::::::::::::::::: gi|525 ERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIM 260 270 280 290 300 310 150 160 170 180 190 200 mKIAA3 QAHRLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTAES ::::::::::::::::.::::::::::::.:.:::::::::::::::::::::::::::: gi|525 QAHRLQKVTDQYGDIWTLHDGGFRNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAES 320 330 340 350 360 370 210 220 230 240 250 260 mKIAA3 CRSTPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGCSV ::::::::::::::::::.::::::::::: :.: :: ::..: ::::.:.:..:::. gi|525 CRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSA 380 390 400 410 420 430 270 280 290 300 310 320 mKIAA3 ESLEKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE :: :: ::.:.: :::..:::: ::::::::::::::::::::::::::::::::::::: gi|525 ESKEKVLEGSKLPDQEKAVSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVE 440 450 460 470 480 490 330 340 350 360 370 380 mKIAA3 YAQSQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERSG ::::::::::::::::. :::::::::::::::::::::::::::.:::::::::::::: gi|525 YAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSG 500 510 520 530 540 550 390 400 410 420 430 440 mKIAA3 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKKE ::::::::::::::::::::::::::::::::::::::::::::: :::::::..::::: gi|525 MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKE 560 570 580 590 600 610 450 460 470 480 490 mKIAA3 LSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 INIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV 620 630 640 650 660 499 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 00:13:20 2009 done: Tue Mar 17 00:20:22 2009 Total Scan time: 947.530 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]