Comparison of KIAA cDNA sequences between mouse and human (KIAA0026)

<<Original sequence data>>

mouse  mKIAA0026 (mbk00081)     length:   1767 bp, CDS:   243 -  1109
human   KIAA0026  (ha00640)     length:   1826 bp, CDS:   306 -  1172

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     14 -   318     204       28      12.1
  CDS:    319 -  1185     761      106      12.2
3'UTR:   1186 -  1849     598       55      8.4

amino acid

  CDS:    319 -  1185     274       15      5.2
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mbk00081     1 GCAGCAGTGATCACACGTCGGCTGCTGGAGAGAGCTGGATTCTCGTTTCA 50
                            |||||||||||||||  ||| ||||||||||||||||
ha00640      1 .............CACGTCGGCTGCTGGGAAGATCTGGATTCTCGTTTCA 37

            51 ----+----*----+----*----+----*----+----*----+----* 100
mbk00081    51 GGTCATCATCAGAAAAGCTAAGTTTGCTATACAGTAAGGATCAGGAGATC 100
               ||||| |||||||||||||||||||||| || ||| ||||||||||||||
ha00640     38 GGTCACCATCAGAAAAGCTAAGTTTGCTGTATAGTGAGGATCAGGAGATC 87

           101 ----+----*----+----*----+----*----+----*----+----* 150
mbk00081   101 TGACCCTGGTTGCAGAACCATTCCTGGTTGCAGAA............... 135
               ||| |||| |||||||||| | |||| || |||||               
ha00640     88 TGATCCTGATTGCAGAACCTTCCCTGATTACAGAATCTTGGATGATTTCA 137

           151 ----+----*----+----*----+----*----+----*----+----* 200
mbk00081   136 ....................................TACAGGGTTGTAT. 148
                                                   | |  |||||||| 
ha00640    138 CAAAAGTTCATCTTCATTGCAGATACCTGCCTTTCTTTCTAGGTTGTATC 187

           201 ----+----*----+----*----+----*----+----*----+----* 250
mbk00081   149 TCCCACTTCATCTTTCCAGACCATCCTAGGAAAT................ 182
               |||||||||| | ||| ||||||||| || | ||                
ha00640    188 TCCCACTTCACCCTTCTAGACCATCCCAGAAGATCTATAAGATTTCATCT 237

           251 ----+----*----+----*----+----*----+----*----+----* 300
mbk00081   183 ........ACTAGGAATCCTTGGAAGGGAAAGAAGGAACATTGTTGGTTG 224
                       ||||||| | |||||||||||||||||||| |||||||||||
ha00640    238 GGGAAATCACTAGGAGTTCTTGGAAGGGAAAGAAGGAAGATTGTTGGTTG 287

           301 ----+----*----+----*----+----*----+----*----+----* 350
                                 M  S  S  R  K  Q  A  S  Q  T  R 
mbk00081   225 GAATAAAAACAGGGTTGAATGAGTTCCAGAAAGCAGGCTTCTCAAACTCG 274
               ||||||||||||||||||||||||||||||||||||| ||||||| ||||
ha00640    288 GAATAAAAACAGGGTTGAATGAGTTCCAGAAAGCAGGGTTCTCAACCTCG 337
                                 M  S  S  R  K  Q  G  S  Q  P  R 

           351 ----+----*----+----*----+----*----+----*----+----* 400
                G  Q  Q  S  A  E  E  D  N  F  K  K  P  T  R  S  N
mbk00081   275 TGGACAACAATCTGCTGAAGAAGACAACTTTAAGAAACCAACTCGAAGCA 324
               |||||| |||||||| |||||||| ||||| || ||||||||| ||||||
ha00640    338 TGGACAGCAATCTGCAGAAGAAGAGAACTTCAAAAAACCAACTAGAAGCA 387
                G  Q  Q  S  A  E  E  E  N  F  K  K  P  T  R  S  N

           401 ----+----*----+----*----+----*----+----*----+----* 450
                 M  Q  R  S  K  M  R  G  A  A  S  G  K  K  S  A  
mbk00081   325 ATATGCAGAGAAGTAAGATGAGAGGAGCTGCCTCGGGAAAGAAGTCAGCT 374
               | |||||||||||||| |||||||| ||  |||| ||||||||| |||||
ha00640    388 ACATGCAGAGAAGTAAAATGAGAGGGGCCTCCTCAGGAAAGAAGACAGCT 437
                 M  Q  R  S  K  M  R  G  A  S  S  G  K  K  T  A  

           451 ----+----*----+----*----+----*----+----*----+----* 500
               G  S  Q  P  K  N  L  D  P  A  L  P  G  R  W  G  G 
mbk00081   375 GGTTCGCAGCCAAAGAATCTCGATCCAGCCCTGCCCGGAAGATGGGGAGG 424
               ||| | ||||  || ||||| || ||||| || || ||||||||||| ||
ha00640    438 GGTCCACAGCAGAAAAATCTTGAACCAGCTCTCCCAGGAAGATGGGGTGG 487
               G  P  Q  Q  K  N  L  E  P  A  L  P  G  R  W  G  G 

           501 ----+----*----+----*----+----*----+----*----+----* 550
                R  S  A  E  N  P  P  S  G  S  V  R  K  T  R  K  N
mbk00081   425 TCGCTCTGCTGAGAACCCCCCTTCCGGTTCTGTGCGGAAGACCAGGAAGA 474
               ||||||||| |||||||||||||| || || ||| |||||||||| ||||
ha00640    488 TCGCTCTGCAGAGAACCCCCCTTCAGGATCCGTGAGGAAGACCAGAAAGA 537
                R  S  A  E  N  P  P  S  G  S  V  R  K  T  R  K  N

           551 ----+----*----+----*----+----*----+----*----+----* 600
                 K  Q  K  A  P  G  N  G  D  G  G  S  T  S  E  V  
mbk00081   475 ACAAGCAGAAGGCTCCTGGCAACGGAGACGGAGGCAGTACCAGTGAAGTC 524
               ||||||||||| ||||||| |||||||| || ||||||||||| ||||  
ha00640    538 ACAAGCAGAAGACTCCTGGAAACGGAGATGGTGGCAGTACCAGCGAAGCA 587
                 K  Q  K  T  P  G  N  G  D  G  G  S  T  S  E  A  

           601 ----+----*----+----*----+----*----+----*----+----* 650
               P  Q  P  P  R  K  K  R  A  R  A  D  P  T  V  E  S 
mbk00081   525 CCCCAGCCCCCTCGGAAGAAAAGGGCACGGGCTGACCCCACTGTGGAGAG 574
               || ||||||||||||||||||||||| ||||| ||||||||||| || ||
ha00640    588 CCTCAGCCCCCTCGGAAGAAAAGGGCCCGGGCAGACCCCACTGTTGAAAG 637
               P  Q  P  P  R  K  K  R  A  R  A  D  P  T  V  E  S 

           651 ----+----*----+----*----+----*----+----*----+----* 700
                E  E  A  F  K  S  R  M  E  V  K  V  K  I  P  E  E
mbk00081   575 CGAGGAGGCATTCAAGAGTAGGATGGAGGTGAAGGTGAAGATCCCTGAAG 624
                |||||||| || |||| ||| |||||||| || |||||||| |||||||
ha00640    638 TGAGGAGGCGTTTAAGAATAGAATGGAGGTTAAAGTGAAGATTCCTGAAG 687
                E  E  A  F  K  N  R  M  E  V  K  V  K  I  P  E  E

           701 ----+----*----+----*----+----*----+----*----+----* 750
                 L  K  P  W  L  V  E  D  W  D  L  V  T  R  Q  K  
mbk00081   625 AATTAAAACCGTGGCTGGTGGAGGACTGGGACTTGGTTACGAGGCAGAAG 674
               |||||||||| ||||| || |||||||||||||| ||||| |||||||||
ha00640    688 AATTAAAACCATGGCTTGTTGAGGACTGGGACTTAGTTACCAGGCAGAAG 737
                 L  K  P  W  L  V  E  D  W  D  L  V  T  R  Q  K  

           751 ----+----*----+----*----+----*----+----*----+----* 800
               Q  L  F  Q  L  P  A  K  K  N  V  D  A  I  L  E  E 
mbk00081   675 CAGTTGTTCCAGCTCCCTGCTAAAAAGAATGTCGATGCCATTCTTGAGGA 724
               ||| |||| || |||||||| || || ||||| ||||| ||||| |||||
ha00640    738 CAGCTGTTTCAACTCCCTGCCAAGAAAAATGTAGATGCAATTCTGGAGGA 787
               Q  L  F  Q  L  P  A  K  K  N  V  D  A  I  L  E  E 

           801 ----+----*----+----*----+----*----+----*----+----* 850
                Y  A  N  C  K  K  S  Q  G  N  V  D  N  K  D  Y  A
mbk00081   725 GTATGCCAATTGTAAGAAGTCGCAGGGAAATGTTGATAATAAGGATTACG 774
               |||||| ||||| ||||| |||||||||||||||||||||||||| || |
ha00640    788 GTATGCAAATTGCAAGAAATCGCAGGGAAATGTTGATAATAAGGAATATG 837
                Y  A  N  C  K  K  S  Q  G  N  V  D  N  K  E  Y  A

           851 ----+----*----+----*----+----*----+----*----+----* 900
                 V  N  E  V  V  G  G  I  K  E  Y  F  N  V  M  L  
mbk00081   775 CAGTTAATGAAGTTGTAGGAGGGATAAAAGAGTATTTCAATGTGATGCTG 824
               | |||||||||||||| | ||| |||||||| ||||||||||||||| ||
ha00640    838 CGGTTAATGAAGTTGTGGCAGGAATAAAAGAATATTTCAATGTGATGTTG 887
                 V  N  E  V  V  A  G  I  K  E  Y  F  N  V  M  L  

           901 ----+----*----+----*----+----*----+----*----+----* 950
               G  T  Q  L  L  Y  K  F  E  R  P  Q  Y  A  E  I  L 
mbk00081   825 GGCACTCAGCTGCTGTACAAGTTTGAAAGGCCTCAGTATGCTGAGATTCT 874
               |||||||||||||| ||||| ||||| ||||| ||||||||||| || ||
ha00640    888 GGCACTCAGCTGCTCTACAAATTTGAGAGGCCCCAGTATGCTGAAATCCT 937
               G  T  Q  L  L  Y  K  F  E  R  P  Q  Y  A  E  I  L 

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                L  A  H  P  D  A  P  M  S  Q  I  Y  G  A  P  H  L
mbk00081   875 GCTGGCTCACCCTGATGCGCCGATGTCGCAGATCTATGGGGCGCCACACC 924
                 |||||||||||||||| || ||||| ||| | ||||| || |||||||
ha00640    938 CTTGGCTCACCCTGATGCTCCAATGTCCCAGGTTTATGGAGCACCACACC 987
                L  A  H  P  D  A  P  M  S  Q  V  Y  G  A  P  H  L

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
                 L  R  L  F  V  R  I  G  A  M  L  A  Y  T  P  L  
mbk00081   925 TCCTGAGATTATTCGTGAGAATTGGGGCAATGTTGGCCTATACGCCCCTT 974
               | ||||||||||| || |||||||| ||||||||||||||||||||||||
ha00640    988 TACTGAGATTATTTGTAAGAATTGGAGCAATGTTGGCCTATACGCCCCTT 1037
                 L  R  L  F  V  R  I  G  A  M  L  A  Y  T  P  L  

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
               D  E  K  S  L  A  L  L  L  G  Y  L  H  D  F  L  K 
mbk00081   975 GATGAGAAAAGCCTGGCATTATTGCTGGGCTATCTGCATGATTTCCTTAA 1024
               |||||||||||||| ||||||||| |||||||| ||||||||||||| ||
ha00640   1038 GATGAGAAAAGCCTTGCATTATTGTTGGGCTATTTGCATGATTTCCTAAA 1087
               D  E  K  S  L  A  L  L  L  G  Y  L  H  D  F  L  K 

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                Y  L  A  K  N  S  A  S  L  F  T  A  S  D  Y  K  V
mbk00081  1025 GTATCTGGCAAAGAATTCTGCCTCTCTGTTTACTGCCAGTGATTACAAAG 1074
                |||||||||||||||||||| ||||| ||||||||||||||||||||||
ha00640   1088 ATATCTGGCAAAGAATTCTGCATCTCTCTTTACTGCCAGTGATTACAAAG 1137
                Y  L  A  K  N  S  A  S  L  F  T  A  S  D  Y  K  V

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                 A  S  A  D  Y  H  R  K  A  L  *                 
mbk00081  1075 TGGCTTCTGCTGACTATCATCGCAAAGCCCTGTGAAGGTCTACTGACCGC 1124
               ||||||||||||| || || |||||||||||||||  |||||| ||| ||
ha00640   1138 TGGCTTCTGCTGAGTACCACCGCAAAGCCCTGTGAGCGTCTACAGACAGC 1187
                 A  S  A  E  Y  H  R  K  A  L  *                 

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbk00081  1125 TCAC...TATTGTCTGGTATCTGTAAACAC...TTCTGTTTAGTCCTTTC 1168
               ||||   | |||||  ||||||||||||||   || |  |||||| ||| 
ha00640   1188 TCACCATTTTTGTCCTGTATCTGTAAACACTTTTTGTTCTTAGTCTTTTT 1237

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mbk00081  1169 ATGGTATAATTGATGTTCTTTAAAACTGTCAGTGTAAAACAGGGCTTATG 1218
                | ||| ||||||||||||||||||  || | |||| |||||||||||||
ha00640   1238 CTTGTAAAATTGATGTTCTTTAAAATCGTTAATGTATAACAGGGCTTATG 1287

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mbk00081  1219 TTTCAGTTTGTTTTCCTGTTCTGTTGTAGACAGAAAATAAAAGGAGTGCC 1268
               |||||||||||||||| |||||||| || |||||||||||||||||||  
ha00640   1288 TTTCAGTTTGTTTTCC.GTTCTGTTTTAAACAGAAAATAAAAGGAGTG.T 1335

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mbk00081  1269 CAGCTCCTTTCCTCATTTCAAAGTTGCTACCAGTGTATGCAGTAATTAG. 1317
                ||||||||| |||||||||||||||||||||||||||||||||||||| 
ha00640   1336 AAGCTCCTTTTCTCATTTCAAAGTTGCTACCAGTGTATGCAGTAATTAGA 1385

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mbk00081  1318 ACAAAGAAGAA..ATTCAGTAGACCATTTTATTGCCTAGTTGACAACATT 1365
               |||||||||||  |||||||||| ||||||||||||||||||||||||||
ha00640   1386 ACAAAGAAGAAACATTCAGTAGAACATTTTATTGCCTAGTTGACAACATT 1435

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mbk00081  1366 GCTTGAATGCTGGTGGTT.CTATCCCTTTGACACTACACAGTTTTCTAAT 1414
               |||||||||||||||||| ||||||||||||||||||||| |||||||||
ha00640   1436 GCTTGAATGCTGGTGGTTCCTATCCCTTTGACACTACACAATTTTCTAAT 1485

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mbk00081  1415 ATGTGTTAATGCTACGTGATGAGATGCCCTGGTTCCTAGTGCCAAAGGTT 1464
               |||||||||||||| ||||  | | |||||| ||||||||||||||||||
ha00640   1486 ATGTGTTAATGCTATGTGACAAAACGCCCTGATTCCTAGTGCCAAAGGTT 1535

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mbk00081  1465 CAACTTAATGTATATACCTGGAAACCCATGCATTTGTGCTTTTTTTTTTT 1514
               |||||||||||||||||||| ||||||||||||||||||| |||||||||
ha00640   1536 CAACTTAATGTATATACCTGAAAACCCATGCATTTGTGCTCTTTTTTTTT 1585

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mbk00081  1515 TTATGGTGCTTGACGTCTGTAAACAGCCCATCCTCTGCAAGTCCATCTTT 1564
               ||||||||||||| ||    |||||||||||||||||||||||||||| |
ha00640   1586 TTATGGTGCTTGAAGT...AAAACAGCCCATCCTCTGCAAGTCCATCTAT 1632

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mbk00081  1565 GTTGTTCCTTAGGCATTCATTCTATCTTTGCTCAAATTGTTGAAGGATGG 1614
               ||||||| |     |  |||||||||||||||||||||||||||||||||
ha00640   1633 GTTGTTCTT.....AGGCATTCTATCTTTGCTCAAATTGTTGAAGGATGG 1677

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mbk00081  1615 TGATTTGTTTCCTGGTTTTTGTATTTGAGTCTAATGCACGTTCTAACATG 1664
               ||||||||||| ||||||||||||||||||||||||||||||||||||||
ha00640   1678 TGATTTGTTTCATGGTTTTTGTATTTGAGTCTAATGCACGTTCTAACATG 1727

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbk00081  1665 ATAGAGGCAATGCATTATTGTGTAGCCACAGTTTTCT.GAAAAGTTGATA 1713
               ||||||||||||||||||||||||||||| ||||||| ||||||||||||
ha00640   1728 ATAGAGGCAATGCATTATTGTGTAGCCACGGTTTTCTGGAAAAGTTGATA 1777

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mbk00081  1714 TTTTAGGAATTGTATTTCAGATCTTAAAAAAAACTTGTTTCTAAATTTCA 1763
               |||||||||||||||||||||||||||| |||| ||||||||||||||| 
ha00640   1778 TTTTAGGAATTGTATTTCAGATCTTAAATAAAATTTGTTTCTAAATTTC. 1826

          1851 ---- 1854
mbk00081  1764 AAGC 1767
                   
ha00640   1827 .... 1827