# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbj01161.fasta.nr -Q ../query/mKIAA0593.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0593, 731 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914691 sequences Expectation_n fit: rho(ln(x))= 5.8508+/-0.000192; mu= 10.1276+/- 0.011 mean_var=99.0231+/-18.912, 0's: 35 Z-trim: 57 B-trim: 283 in 1/64 Lambda= 0.128886 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74186901|dbj|BAE20510.1| unnamed protein produc (1241) 4746 893.5 0 gi|148683837|gb|EDL15784.1| mCG12704 [Mus musculus (1948) 4746 893.6 0 gi|81910189|sp|Q5SWW4.1|MED13_MOUSE RecName: Full= (2171) 4746 893.7 0 gi|149053743|gb|EDM05560.1| thyroid hormone recept (2040) 4698 884.7 0 gi|73966750|ref|XP_537704.2| PREDICTED: similar to (2182) 4553 857.8 0 gi|4530437|gb|AAD22032.1| thyroid hormone receptor (2174) 4520 851.7 0 gi|119571823|gb|EAW51438.1| thyroid hormone recept (2174) 4520 851.7 0 gi|166214951|sp|Q9UHV7.2|MED13_HUMAN RecName: Full (2174) 4520 851.7 0 gi|109114565|ref|XP_001110128.1| PREDICTED: mediat (2174) 4517 851.1 0 gi|114669769|ref|XP_001138050.1| PREDICTED: mediat (2188) 4516 850.9 0 gi|194217212|ref|XP_001500884.2| PREDICTED: mediat (2165) 4499 847.7 0 gi|194675789|ref|XP_603205.4| PREDICTED: similar t (2332) 4491 846.3 0 gi|126307412|ref|XP_001362355.1| PREDICTED: hypoth (2172) 4342 818.6 0 gi|149635568|ref|XP_001509907.1| PREDICTED: simila (2170) 4220 795.9 0 gi|109114567|ref|XP_001110078.1| PREDICTED: mediat (1991) 4218 795.5 0 gi|118100310|ref|XP_415884.2| PREDICTED: similar t (2225) 4155 783.8 0 gi|224076629|ref|XP_002199236.1| PREDICTED: mediat (2179) 4122 777.6 0 gi|67971682|dbj|BAE02183.1| unnamed protein produc ( 611) 3049 577.7 4.5e-162 gi|224071919|ref|XP_002196121.1| PREDICTED: mediat (2206) 2807 533.1 4.1e-148 gi|118098868|ref|XP_415317.2| PREDICTED: similar t (2195) 2759 524.2 2e-145 gi|189528813|ref|XP_001921335.1| PREDICTED: simila (1951) 2188 418.0 1.7e-113 gi|189528775|ref|XP_001918662.1| PREDICTED: hypoth (2102) 2188 418.0 1.8e-113 gi|166233815|sp|A2VCZ5.1|MD13L_DANRE RecName: Full (2102) 2188 418.0 1.8e-113 gi|49257394|gb|AAH72653.1| Med13l protein [Mus mus (1879) 2065 395.1 1.2e-106 gi|149720623|ref|XP_001489783.1| PREDICTED: mediat (2190) 2056 393.5 4.5e-106 gi|6453436|emb|CAB61363.1| hypothetical protein [H (1908) 2046 391.6 1.5e-105 gi|51476392|emb|CAH18186.1| hypothetical protein [ (2069) 2046 391.6 1.6e-105 gi|119618487|gb|EAW98081.1| thyroid hormone recept (2195) 2046 391.6 1.6e-105 gi|74749769|sp|Q71F56.1|MD13L_HUMAN RecName: Full= (2210) 2046 391.6 1.6e-105 gi|73995266|ref|XP_534693.2| PREDICTED: similar to (2280) 2044 391.3 2.2e-105 gi|109098865|ref|XP_001112106.1| PREDICTED: simila (2210) 2042 390.9 2.7e-105 gi|10435895|dbj|BAB14697.1| unnamed protein produc (1111) 2036 389.5 3.5e-105 gi|30353895|gb|AAH52320.1| Med13l protein [Mus mus (1125) 2022 386.9 2.2e-104 gi|149063479|gb|EDM13802.1| thyroid hormone recept (1374) 2023 387.2 2.2e-104 gi|148687845|gb|EDL19792.1| thyroid hormone recept (2050) 2022 387.1 3.4e-104 gi|38036201|gb|AAR08419.1| thyroid hormone recepto (2203) 2022 387.2 3.6e-104 gi|83305883|sp|Q6JPI3.2|MD13L_MOUSE RecName: Full= (2207) 2022 387.2 3.6e-104 gi|146134449|ref|NP_766012.3| thyroid hormone rece (2207) 2022 387.2 3.6e-104 gi|119909346|ref|XP_595505.3| PREDICTED: similar t (2209) 2019 386.6 5.3e-104 gi|126324386|ref|XP_001365474.1| PREDICTED: simila (2199) 2018 386.4 6e-104 gi|126324384|ref|XP_001365407.1| PREDICTED: simila (2201) 2018 386.4 6e-104 gi|47210173|emb|CAF90589.1| unnamed protein produc (2253) 1882 361.1 2.5e-96 gi|47223584|emb|CAF99193.1| unnamed protein produc (1986) 1641 316.3 7e-83 gi|47216840|emb|CAG02731.1| unnamed protein produc (2163) 1433 277.6 3.3e-71 gi|6808448|emb|CAB70855.1| hypothetical protein [H ( 409) 1331 258.1 4.8e-66 gi|210117040|gb|EEA64780.1| hypothetical protein B (1251) 1333 258.9 8.6e-66 gi|210117029|gb|EEA64769.1| hypothetical protein B (1245) 1331 258.5 1.1e-65 gi|47195883|emb|CAF88983.1| unnamed protein produc ( 278) 1177 229.3 1.5e-57 gi|115745092|ref|XP_001203054.1| PREDICTED: simila (1127) 1179 230.2 3.3e-57 gi|157016223|gb|EAA11333.5| AGAP006436-PA [Anophel (2679) 1154 225.8 1.6e-55 >>gi|74186901|dbj|BAE20510.1| unnamed protein product [M (1241 aa) initn: 4746 init1: 4746 opt: 4746 Z-score: 4767.3 bits: 893.5 E(): 0 Smith-Waterman score: 4746; 99.028% identity (99.306% similar) in 720 aa overlap (12-731:380-1099) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|741 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 350 360 370 380 390 400 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR 410 420 430 440 450 460 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL 470 480 490 500 510 520 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV 530 540 550 560 570 580 230 240 250 260 270 280 mKIAA0 PISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQSG 590 600 610 620 630 640 290 300 310 320 330 340 mKIAA0 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY 650 660 670 680 690 700 350 360 370 380 390 400 mKIAA0 IIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVKHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVKHD 710 720 730 740 750 760 410 420 430 440 450 460 mKIAA0 DRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP 770 780 790 800 810 820 470 480 490 500 510 520 mKIAA0 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI 830 840 850 860 870 880 530 540 550 560 570 580 mKIAA0 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR 890 900 910 920 930 940 590 600 610 620 630 640 mKIAA0 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL 950 960 970 980 990 1000 650 660 670 680 690 700 mKIAA0 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD 1010 1020 1030 1040 1050 1060 710 720 730 mKIAA0 TGDDLDPDIINILPASPTASPVHSPGSHYP :::::::::::::::::::::::::::::: gi|741 TGDDLDPDIINILPASPTASPVHSPGSHYPHGGDAGKGQGTDRLLSTESHDEVTNILQQP 1070 1080 1090 1100 1110 1120 >>gi|148683837|gb|EDL15784.1| mCG12704 [Mus musculus] (1948 aa) initn: 4746 init1: 4746 opt: 4746 Z-score: 4764.6 bits: 893.6 E(): 0 Smith-Waterman score: 4746; 99.028% identity (99.306% similar) in 720 aa overlap (12-731:1087-1806) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|148 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1060 1070 1080 1090 1100 1110 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR 1120 1130 1140 1150 1160 1170 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL 1180 1190 1200 1210 1220 1230 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV 1240 1250 1260 1270 1280 1290 230 240 250 260 270 280 mKIAA0 PISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQSG 1300 1310 1320 1330 1340 1350 290 300 310 320 330 340 mKIAA0 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY 1360 1370 1380 1390 1400 1410 350 360 370 380 390 400 mKIAA0 IIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVKHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVKHD 1420 1430 1440 1450 1460 1470 410 420 430 440 450 460 mKIAA0 DRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP 1480 1490 1500 1510 1520 1530 470 480 490 500 510 520 mKIAA0 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI 1540 1550 1560 1570 1580 1590 530 540 550 560 570 580 mKIAA0 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR 1600 1610 1620 1630 1640 1650 590 600 610 620 630 640 mKIAA0 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL 1660 1670 1680 1690 1700 1710 650 660 670 680 690 700 mKIAA0 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD 1720 1730 1740 1750 1760 1770 710 720 730 mKIAA0 TGDDLDPDIINILPASPTASPVHSPGSHYP :::::::::::::::::::::::::::::: gi|148 TGDDLDPDIINILPASPTASPVHSPGSHYPHGGDAGKGQGTDRLLSTESHDEVTNILQQP 1780 1790 1800 1810 1820 1830 >>gi|81910189|sp|Q5SWW4.1|MED13_MOUSE RecName: Full=Medi (2171 aa) initn: 4746 init1: 4746 opt: 4746 Z-score: 4764.0 bits: 893.7 E(): 0 Smith-Waterman score: 4746; 99.028% identity (99.306% similar) in 720 aa overlap (12-731:1310-2029) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|819 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1280 1290 1300 1310 1320 1330 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR 1340 1350 1360 1370 1380 1390 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL 1400 1410 1420 1430 1440 1450 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV 1460 1470 1480 1490 1500 1510 230 240 250 260 270 280 mKIAA0 PISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQSG 1520 1530 1540 1550 1560 1570 290 300 310 320 330 340 mKIAA0 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY 1580 1590 1600 1610 1620 1630 350 360 370 380 390 400 mKIAA0 IIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVKHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 IIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVKHD 1640 1650 1660 1670 1680 1690 410 420 430 440 450 460 mKIAA0 DRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP 1700 1710 1720 1730 1740 1750 470 480 490 500 510 520 mKIAA0 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI 1760 1770 1780 1790 1800 1810 530 540 550 560 570 580 mKIAA0 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR 1820 1830 1840 1850 1860 1870 590 600 610 620 630 640 mKIAA0 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL 1880 1890 1900 1910 1920 1930 650 660 670 680 690 700 mKIAA0 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD 1940 1950 1960 1970 1980 1990 710 720 730 mKIAA0 TGDDLDPDIINILPASPTASPVHSPGSHYP :::::::::::::::::::::::::::::: gi|819 TGDDLDPDIINILPASPTASPVHSPGSHYPHGGDAGKGQGTDRLLSTESHDEVTNILQQP 2000 2010 2020 2030 2040 2050 >>gi|149053743|gb|EDM05560.1| thyroid hormone receptor a (2040 aa) initn: 4698 init1: 4698 opt: 4698 Z-score: 4716.1 bits: 884.7 E(): 0 Smith-Waterman score: 4698; 97.778% identity (99.028% similar) in 720 aa overlap (12-731:1179-1898) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|149 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1150 1160 1170 1180 1190 1200 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR 1210 1220 1230 1240 1250 1260 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL 1270 1280 1290 1300 1310 1320 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::.: :: gi|149 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTLTPGV 1330 1340 1350 1360 1370 1380 230 240 250 260 270 280 mKIAA0 PISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQSG ::::::::::::::::::::::.:::::::::::::::::::::::::::::.:::::: gi|149 AISTSVATANSTLTTTSSSSSSSMSSGVSSNKLPSFPPFGSMNTSGTGSMSAQGSTVQSG 1390 1400 1410 1420 1430 1440 290 300 310 320 330 340 mKIAA0 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIVVY 1450 1460 1470 1480 1490 1500 350 360 370 380 390 400 mKIAA0 IIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVKHD ::::::::::::::.::::::::::::::::.:::::::::::::::::::::::::::: gi|149 IIDPFTYENKDESTSSSNVWTLGLLRCFLEMLQTLPPHIKSTVSVQIVPCQYLLQPVKHD 1510 1520 1530 1540 1550 1560 410 420 430 440 450 460 mKIAA0 DRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 DRQIYSQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTP 1570 1580 1590 1600 1610 1620 470 480 490 500 510 520 mKIAA0 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINI 1630 1640 1650 1660 1670 1680 530 540 550 560 570 580 mKIAA0 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSR 1690 1700 1710 1720 1730 1740 590 600 610 620 630 640 mKIAA0 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTL 1750 1760 1770 1780 1790 1800 650 660 670 680 690 700 mKIAA0 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLD 1810 1820 1830 1840 1850 1860 710 720 730 mKIAA0 TGDDLDPDIINILPASPTASPVHSPGSHYP ::::::::::::::::::.::::::::::: gi|149 TGDDLDPDIINILPASPTTSPVHSPGSHYPHGGDAGKGQGTDRLLSTESHDEVTNILQQP 1870 1880 1890 1900 1910 1920 >>gi|73966750|ref|XP_537704.2| PREDICTED: similar to Thy (2182 aa) initn: 3282 init1: 3251 opt: 4553 Z-score: 4570.0 bits: 857.8 E(): 0 Smith-Waterman score: 4553; 94.044% identity (98.476% similar) in 722 aa overlap (12-731:1319-2040) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|739 MLLFLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1290 1300 1310 1320 1330 1340 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR ::::::::::::::::.::::::::::::::::::::::::::::.:::::::::::::: gi|739 DYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEALLNGAKSFFRDLTAIYESCR 1350 1360 1370 1380 1390 1400 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL ::::::::::::::::.::.:::::::::.:.:::::::::::::::::::::::::::: gi|739 LGQHRPISRLLTDGIMRVGSTASKKLSEKLVAEWFSQAADGNNEAFSKLKLYAQVCRYDL 1410 1420 1430 1440 1450 1460 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::::::::::::::::::: .:::.:.::::::::::.::::::::::::.:.:::: gi|739 GPYLASQPLDSSLLSQPNLVAPASQSLITSPQMTNTGNANTPSATLASAASSTITVTSGV 1470 1480 1490 1500 1510 1520 230 240 250 260 270 mKIAA0 PISTSVATANSTLTTTSSSSSSS--LSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQ .:.:::::::::::::.::::: :.::::::::::::::::::.:.:::::.:..::: gi|739 AMSSSVATANSTLTTTSTSSSSSSNLNSGVSSNKLPSFPPFGSMNSSATGSMSTQGNTVQ 1530 1540 1550 1560 1570 1580 280 290 300 310 320 330 mKIAA0 SGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV .:::::::::.::.:::::::.:::.:::::::::::::::::::::::::::::::::: gi|739 NGQLGGQQSSALQTAGISGESSSLPAQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV 1590 1600 1610 1620 1630 1640 340 350 360 370 380 390 mKIAA0 VYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVK 1650 1660 1670 1680 1690 1700 400 410 420 430 440 450 mKIAA0 HDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLY :.:::::.:::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|739 HEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLY 1710 1720 1730 1740 1750 1760 460 470 480 490 500 510 mKIAA0 TPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII 1770 1780 1790 1800 1810 1820 520 530 540 550 560 570 mKIAA0 NIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|739 NIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSSLL 1830 1840 1850 1860 1870 1880 580 590 600 610 620 630 mKIAA0 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST 1890 1900 1910 1920 1930 1940 640 650 660 670 680 690 mKIAA0 TLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL 1950 1960 1970 1980 1990 2000 700 710 720 730 mKIAA0 LDTGDDLDPDIINILPASPTASPVHSPGSHYP ::::::::::::::::::::.::::::::::: gi|739 LDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDAGKGQGTDRLLSTESHDEVTNILQ 2010 2020 2030 2040 2050 2060 gi|739 QPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDELLHSKHSHP 2070 2080 2090 2100 2110 2120 >>gi|4530437|gb|AAD22032.1| thyroid hormone receptor-ass (2174 aa) initn: 3252 init1: 3221 opt: 4520 Z-score: 4536.9 bits: 851.7 E(): 0 Smith-Waterman score: 4520; 92.936% identity (98.061% similar) in 722 aa overlap (12-731:1311-2032) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|453 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1290 1300 1310 1320 1330 1340 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::.::::::::::::.::::::::::::::::::::::::::::.:::::::::::::: gi|453 DYDYLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEALLNGAKSFFRDLTAIYESCR 1350 1360 1370 1380 1390 1400 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL ::::::.:::::::::.::.:::::::::.:.:::::::::::::::::::::::::::: gi|453 LGQHRPVSRLLTDGIMRVGSTASKKLSEKLVAEWFSQAADGNNEAFSKLKLYAQVCRYDL 1410 1420 1430 1440 1450 1460 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::: ::::::::::::::: .:::.: ::::::::::.::::::::::::::.:::: gi|453 GPYLASLPLDSSLLSQPNLVAPTSQSLITPPQMTNTGNANTPSATLASAASSTMTVTSGV 1470 1480 1490 1500 1510 1520 230 240 250 260 270 mKIAA0 PISTSVATANSTLTT--TSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQ :::::::::::::: :::::::.:.::::::::::::::::::....::::.::.::: gi|453 AISTSVATANSTLTTASTSSSSSSNLNSGVSSNKLPSFPPFGSMNSNAAGSMSTQANTVQ 1530 1540 1550 1560 1570 1580 280 290 300 310 320 330 mKIAA0 SGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV ::::::::.:.::.:::::::.::::::::::::::::::::::::::::::.::::::: gi|453 SGQLGGQQTSALQTAGISGESSSLPTQPHPDVSESTMDRDKVGIPTDGDSHAVTYPPAIV 1590 1600 1610 1620 1630 1640 340 350 360 370 380 390 mKIAA0 VYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVK ::::::::::: :::::::.:::::::::::::::::::::::::::::.:::::::::: gi|453 VYIIDPFTYENTDESTNSSSVWTLGLLRCFLEMVQTLPPHIKSTVSVQIIPCQYLLQPVK 1650 1660 1670 1680 1690 1700 400 410 420 430 440 450 mKIAA0 HDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLY :.::.:: :::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|453 HEDREIYPQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALRSPDRPECIRLY 1710 1720 1730 1740 1750 1760 460 470 480 490 500 510 mKIAA0 TPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|453 APPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII 1770 1780 1790 1800 1810 1820 520 530 540 550 560 570 mKIAA0 NIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL ::::::::::::.:::.::::::::::::::::::::::::::::::::::::::::::: gi|453 NIDVPNRARRKKSSARKFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL 1830 1840 1850 1860 1870 1880 580 590 600 610 620 630 mKIAA0 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|453 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST 1890 1900 1910 1920 1930 1940 640 650 660 670 680 690 mKIAA0 TLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|453 TLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL 1950 1960 1970 1980 1990 2000 700 710 720 730 mKIAA0 LDTGDDLDPDIINILPASPTASPVHSPGSHYP ::::::::::::::::::::.::::::::::: gi|453 LDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDAGKGQSTDRLLSTEPHEEVPNILQ 2010 2020 2030 2040 2050 2060 gi|453 QPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDELLHSKHSHP 2070 2080 2090 2100 2110 2120 >>gi|119571823|gb|EAW51438.1| thyroid hormone receptor a (2174 aa) initn: 3252 init1: 3221 opt: 4520 Z-score: 4536.9 bits: 851.7 E(): 0 Smith-Waterman score: 4520; 92.936% identity (98.061% similar) in 722 aa overlap (12-731:1311-2032) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|119 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1290 1300 1310 1320 1330 1340 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::.::::::::::::.::::::::::::::::::::::::::::.:::::::::::::: gi|119 DYDYLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEALLNGAKSFFRDLTAIYESCR 1350 1360 1370 1380 1390 1400 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL ::::::.:::::::::.::.:::::::::.:.:::::::::::::::::::::::::::: gi|119 LGQHRPVSRLLTDGIMRVGSTASKKLSEKLVAEWFSQAADGNNEAFSKLKLYAQVCRYDL 1410 1420 1430 1440 1450 1460 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::: ::::::::::::::: .:::.: ::::::::::.::::::::::::::.:::: gi|119 GPYLASLPLDSSLLSQPNLVAPTSQSLITPPQMTNTGNANTPSATLASAASSTMTVTSGV 1470 1480 1490 1500 1510 1520 230 240 250 260 270 mKIAA0 PISTSVATANSTLTT--TSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQ :::::::::::::: :::::::.:.::::::::::::::::::....::::.::.::: gi|119 AISTSVATANSTLTTASTSSSSSSNLNSGVSSNKLPSFPPFGSMNSNAAGSMSTQANTVQ 1530 1540 1550 1560 1570 1580 280 290 300 310 320 330 mKIAA0 SGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV ::::::::.:.::.:::::::.::::::::::::::::::::::::::::::.::::::: gi|119 SGQLGGQQTSALQTAGISGESSSLPTQPHPDVSESTMDRDKVGIPTDGDSHAVTYPPAIV 1590 1600 1610 1620 1630 1640 340 350 360 370 380 390 mKIAA0 VYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVK ::::::::::: :::::::.:::::::::::::::::::::::::::::.:::::::::: gi|119 VYIIDPFTYENTDESTNSSSVWTLGLLRCFLEMVQTLPPHIKSTVSVQIIPCQYLLQPVK 1650 1660 1670 1680 1690 1700 400 410 420 430 440 450 mKIAA0 HDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLY :.::.:: :::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|119 HEDREIYPQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALRSPDRPECIRLY 1710 1720 1730 1740 1750 1760 460 470 480 490 500 510 mKIAA0 TPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII 1770 1780 1790 1800 1810 1820 520 530 540 550 560 570 mKIAA0 NIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL ::::::::::::.:::.::::::::::::::::::::::::::::::::::::::::::: gi|119 NIDVPNRARRKKSSARKFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL 1830 1840 1850 1860 1870 1880 580 590 600 610 620 630 mKIAA0 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST 1890 1900 1910 1920 1930 1940 640 650 660 670 680 690 mKIAA0 TLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL 1950 1960 1970 1980 1990 2000 700 710 720 730 mKIAA0 LDTGDDLDPDIINILPASPTASPVHSPGSHYP ::::::::::::::::::::.::::::::::: gi|119 LDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDAGKGQSTDRLLSTEPHEEVPNILQ 2010 2020 2030 2040 2050 2060 gi|119 QPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDELLHSKHSHP 2070 2080 2090 2100 2110 2120 >>gi|166214951|sp|Q9UHV7.2|MED13_HUMAN RecName: Full=Med (2174 aa) initn: 3252 init1: 3221 opt: 4520 Z-score: 4536.9 bits: 851.7 E(): 0 Smith-Waterman score: 4520; 92.936% identity (98.061% similar) in 722 aa overlap (12-731:1311-2032) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|166 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1290 1300 1310 1320 1330 1340 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::.::::::::::::.::::::::::::::::::::::::::::.:::::::::::::: gi|166 DYDYLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEALLNGAKSFFRDLTAIYESCR 1350 1360 1370 1380 1390 1400 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL ::::::.:::::::::.::.:::::::::.:.:::::::::::::::::::::::::::: gi|166 LGQHRPVSRLLTDGIMRVGSTASKKLSEKLVAEWFSQAADGNNEAFSKLKLYAQVCRYDL 1410 1420 1430 1440 1450 1460 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::: ::::::::::::::: .:::.: ::::::::::.::::::::::::::.:::: gi|166 GPYLASLPLDSSLLSQPNLVAPTSQSLITPPQMTNTGNANTPSATLASAASSTMTVTSGV 1470 1480 1490 1500 1510 1520 230 240 250 260 270 mKIAA0 PISTSVATANSTLTT--TSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQ :::::::::::::: :::::::.:.::::::::::::::::::....::::.::.::: gi|166 AISTSVATANSTLTTASTSSSSSSNLNSGVSSNKLPSFPPFGSMNSNAAGSMSTQANTVQ 1530 1540 1550 1560 1570 1580 280 290 300 310 320 330 mKIAA0 SGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV ::::::::.:.::.:::::::.::::::::::::::::::::::::::::::.::::::: gi|166 SGQLGGQQTSALQTAGISGESSSLPTQPHPDVSESTMDRDKVGIPTDGDSHAVTYPPAIV 1590 1600 1610 1620 1630 1640 340 350 360 370 380 390 mKIAA0 VYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVK ::::::::::: :::::::.:::::::::::::::::::::::::::::.:::::::::: gi|166 VYIIDPFTYENTDESTNSSSVWTLGLLRCFLEMVQTLPPHIKSTVSVQIIPCQYLLQPVK 1650 1660 1670 1680 1690 1700 400 410 420 430 440 450 mKIAA0 HDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLY :.::.:: :::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|166 HEDREIYPQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALRSPDRPECIRLY 1710 1720 1730 1740 1750 1760 460 470 480 490 500 510 mKIAA0 TPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 APPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII 1770 1780 1790 1800 1810 1820 520 530 540 550 560 570 mKIAA0 NIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL ::::::::::::.:::.::::::::::::::::::::::::::::::::::::::::::: gi|166 NIDVPNRARRKKSSARKFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL 1830 1840 1850 1860 1870 1880 580 590 600 610 620 630 mKIAA0 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST 1890 1900 1910 1920 1930 1940 640 650 660 670 680 690 mKIAA0 TLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 TLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL 1950 1960 1970 1980 1990 2000 700 710 720 730 mKIAA0 LDTGDDLDPDIINILPASPTASPVHSPGSHYP ::::::::::::::::::::.::::::::::: gi|166 LDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDAGKGQSTDRLLSTEPHEEVPNILQ 2010 2020 2030 2040 2050 2060 gi|166 QPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDELLHSKHSHP 2070 2080 2090 2100 2110 2120 >>gi|109114565|ref|XP_001110128.1| PREDICTED: mediator o (2174 aa) initn: 3270 init1: 3237 opt: 4517 Z-score: 4533.9 bits: 851.1 E(): 0 Smith-Waterman score: 4517; 92.936% identity (98.061% similar) in 722 aa overlap (12-731:1311-2032) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|109 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1290 1300 1310 1320 1330 1340 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::.::::::::::::.::::::::::::::::::::::::::::.:::::::::::::: gi|109 DYDYLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEALLNGAKSFFRDLTAIYESCR 1350 1360 1370 1380 1390 1400 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL ::::::.:::::::::.::.:::.:::::.:.:::::::::::::::::::::::::::: gi|109 LGQHRPVSRLLTDGIMRVGSTASNKLSEKLVAEWFSQAADGNNEAFSKLKLYAQVCRYDL 1410 1420 1430 1440 1450 1460 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::: ::::::::::::::: .:::.: ::::::::::.::::::::::::::::::: gi|109 GPYLASLPLDSSLLSQPNLVAPTSQSLITPPQMTNTGNANTPSATLASAASSTMTMTSGV 1470 1480 1490 1500 1510 1520 230 240 250 260 270 mKIAA0 PISTSVATANSTLTT--TSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQ :::::::::::::: :::::::.:.::::::::::::::::::....::::.::.::: gi|109 AISTSVATANSTLTTASTSSSSSSNLNSGVSSNKLPSFPPFGSMNSNAAGSMSTQANTVQ 1530 1540 1550 1560 1570 1580 280 290 300 310 320 330 mKIAA0 SGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV ::::::::.:.::.:::::::.:::::::::::::::::::::::::::::::::::::: gi|109 SGQLGGQQTSTLQTAGISGESSSLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV 1590 1600 1610 1620 1630 1640 340 350 360 370 380 390 mKIAA0 VYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVK ::::::::::: :::.:::.:::::::::::::::::::::::::::::.:::::::::: gi|109 VYIIDPFTYENTDESANSSSVWTLGLLRCFLEMVQTLPPHIKSTVSVQIIPCQYLLQPVK 1650 1660 1670 1680 1690 1700 400 410 420 430 440 450 mKIAA0 HDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLY :.::.:: :::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|109 HEDREIYPQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALRSPDRPECIRLY 1710 1720 1730 1740 1750 1760 460 470 480 490 500 510 mKIAA0 TPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 APPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII 1770 1780 1790 1800 1810 1820 520 530 540 550 560 570 mKIAA0 NIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL ::::::::::::.:::.::::::::::::::::::::::::::::::::::::::::::: gi|109 NIDVPNRARRKKSSARKFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL 1830 1840 1850 1860 1870 1880 580 590 600 610 620 630 mKIAA0 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST 1890 1900 1910 1920 1930 1940 640 650 660 670 680 690 mKIAA0 TLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL 1950 1960 1970 1980 1990 2000 700 710 720 730 mKIAA0 LDTGDDLDPDIINILPASPTASPVHSPGSHYP ::::::::::::::::::::.::::::::::: gi|109 LDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDVGKGQSTDRLLSTEPHEEVPNILQ 2010 2020 2030 2040 2050 2060 gi|109 QPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDELLHSKHSHP 2070 2080 2090 2100 2110 2120 >>gi|114669769|ref|XP_001138050.1| PREDICTED: mediator o (2188 aa) initn: 3247 init1: 3221 opt: 4516 Z-score: 4532.8 bits: 850.9 E(): 0 Smith-Waterman score: 4516; 92.936% identity (98.061% similar) in 722 aa overlap (12-731:1325-2046) 10 20 30 40 mKIAA0 GTDESAVVPEIHQFHKSLGQPFYETDESPEPLPIPTFLLGY .:::: :. : ::::::::::::::::: gi|114 MLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGY 1300 1310 1320 1330 1340 1350 50 60 70 80 90 100 mKIAA0 DYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEALLNGARSFFRDLTAIYESCR :::.::::::::::::.::::::::::::::::::::::::::::.:::::::::::::: gi|114 DYDYLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEALLNGAKSFFRDLTAIYESCR 1360 1370 1380 1390 1400 1410 110 120 130 140 150 160 mKIAA0 LGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADGNNEAFSKLKLYAQVCRYDL ::::::::::::::::.::.:::::::::.:.:::::::::::::::::::::::::::: gi|114 LGQHRPISRLLTDGIMRVGSTASKKLSEKLVAEWFSQAADGNNEAFSKLKLYAQVCRYDL 1420 1430 1440 1450 1460 1470 170 180 190 200 210 220 mKIAA0 GPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANAPSATLASAASSTMTMTSGV :::::: ::::::::::::::: .:::.: ::::::::::.::::::::.:::::.:::: gi|114 GPYLASLPLDSSLLSQPNLVAPTSQSLITPPQMTNTGNANTPSATLASAVSSTMTVTSGV 1480 1490 1500 1510 1520 1530 230 240 250 260 270 mKIAA0 PISTSVATANSTLTT--TSSSSSSSLSSGVSSNKLPSFPPFGSMNTSGTGSMSAQASTVQ :::::::::::::: :::::::.:.::::::::::::::::::....::::.::.::: gi|114 AISTSVATANSTLTTASTSSSSSSNLNSGVSSNKLPSFPPFGSMNSNAAGSMSTQANTVQ 1540 1550 1560 1570 1580 1590 280 290 300 310 320 330 mKIAA0 SGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVGIPTDGDSHAITYPPAIV ::::::::.:.::.:::::::.::::::::::::::::::::::::::::::.::::::: gi|114 SGQLGGQQTSALQTAGISGESSSLPTQPHPDVSESTMDRDKVGIPTDGDSHAVTYPPAIV 1600 1610 1620 1630 1640 1650 340 350 360 370 380 390 mKIAA0 VYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQYLLQPVK ::::::::::: :::::::.:::::::::::::::::::::::::::::.:::::::::: gi|114 VYIIDPFTYENTDESTNSSSVWTLGLLRCFLEMVQTLPPHIKSTVSVQIIPCQYLLQPVK 1660 1670 1680 1690 1700 1710 400 410 420 430 440 450 mKIAA0 HDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLY :.::.:: :::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|114 HEDREIYPQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALRSPDRPECIRLY 1720 1730 1740 1750 1760 1770 460 470 480 490 500 510 mKIAA0 TPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCII 1780 1790 1800 1810 1820 1830 520 530 540 550 560 570 mKIAA0 NIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL ::::::::::::.:::.::::::::::::::::::::::::::::::::::::::::::: gi|114 NIDVPNRARRKKSSARKFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLL 1840 1850 1860 1870 1880 1890 580 590 600 610 620 630 mKIAA0 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST 1900 1910 1920 1930 1940 1950 640 650 660 670 680 690 mKIAA0 TLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDL 1960 1970 1980 1990 2000 2010 700 710 720 730 mKIAA0 LDTGDDLDPDIINILPASPTASPVHSPGSHYP ::::::::::::::::::::.::::::::::: gi|114 LDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDAGKGQSTDRLLSTEPHEEVPNILQ 2020 2030 2040 2050 2060 2070 gi|114 QPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDELLHSKHSHP 2080 2090 2100 2110 2120 2130 731 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 09:17:54 2009 done: Sun Mar 15 09:25:59 2009 Total Scan time: 1068.660 Total Display time: 0.480 Function used was FASTA [version 34.26.5 April 26, 2007]