Comparison of KIAA cDNA sequences between mouse and human (KIAA1279)

<< Original sequence data >>

mouse  mKIAA1279 (mbj00660)     length:   2371 bp
human  hh00842s1    length:   2463 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :     1869      1593      276      14.77
  Total:     1869      1593      276      14.77

  3'UTR:      453       311      142      31.35

amino acid

  CDS1 :      625       572       53       8.48
  Total:      625       572       53       8.48
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse    51 -  1919      3 -  1919     17 -   639
         human    21 -  1901      3 -  1901      7 -   633
  3'UTR: mouse  1920 -  2371
         human  1902 -  2463
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
              1 ----+----*----+----*----+----*----+----*----+----* 50
             17 S  A  Q  A  A  M  A  N  A  P  G  P  E  I  R  E  K  33
mbj00660     51 TCAGCTCAGGCCGCGATGGCGAACGCTCCGGGGCCAGAGATCCGCGAGAA 100
                 |||   ||||||| |||||||||| |||| || ||||| || |||||||
hh00842s1    21 GCAGTAGAGGCCGCTATGGCGAACGTTCCGTGGGCAGAGGTCTGCGAGAA 70
              7 A  V  E  A  A  M  A  N  V  P  W  A  E  V  C  E  K  23

             51 ----+----*----+----*----+----*----+----*----+----* 100
             34  F  Q  A  A  L  A  L  S  R  V  E  L  H  K  N  P  E 50
mbj00660    101 GTTCCAGGCAGCGCTGGCCCTGTCGCGGGTGGAGCTGCACAAGAACCCGG 150
                 |||||||| ||||| || |||||||||||||| ||||| || || ||||
hh00842s1    71 ATTCCAGGCGGCGCTCGCTCTGTCGCGGGTGGAACTGCATAAAAATCCGG 120
             24  F  Q  A  A  L  A  L  S  R  V  E  L  H  K  N  P  E 40

            101 ----+----*----+----*----+----*----+----*----+----* 150
             51   K  E  P  Y  K  S  K  Y  G  A  R  A  L  L  E  E   66
mbj00660    151 AGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAG 200
                ||||||| || ||||||||||| ||| |||| || |||||  |||| |||
hh00842s1   121 AGAAGGAACCATACAAGTCCAAATACAGCGCCCGGGCGCTACTGGAAGAG 170
             41   K  E  P  Y  K  S  K  Y  S  A  R  A  L  L  E  E   56

            151 ----+----*----+----*----+----*----+----*----+----* 200
             67 V  R  A  L  L  G  P  A  P  E  D  E  D  E  .  P  A  82
mbj00660    201 GTGCGCGCGCTGCTGGGCCCGGCGCCCGAGGACGAGGACGAG...CCGGC 247
                ||    |||||||| ||||| ||||| ||||||||||| |||   || | 
hh00842s1   171 GTCAAGGCGCTGCTCGGCCCTGCGCCTGAGGACGAGGATGAGCGGCCTGA 220
             57 V  K  A  L  L  G  P  A  P  E  D  E  D  E  R  P  E  73

            201 ----+----*----+----*----+----*----+----*----+----* 250
             83  A  D  D  G  P  G  .  .  D  Q  A  L  G  .  A  G  E 96
mbj00660    248 TGCTGACGATGGGCCGGGC......GACCAGGCCTTGGGC...GCGGGTG 288
                 || || ||  | |||||       ||||| ||| ||||     ||| ||
hh00842s1   221 GGCCGAGGACAGCCCGGGTGCCGGTGACCACGCCCTGGGGCTGCCGGCTG 270
             74  A  E  D  S  P  G  A  G  D  H  A  L  G  L  P  A  E 90

            251 ----+----*----+----*----+----*----+----*----+----* 300
             97   P  R  E  A  E  G  P  G  A  Q  R  A  L  R  L  A   112
mbj00660    289 AGCCCCGGGAGGCTGAGGGCCCCGGAGCGCAGCGGGCGCTGCGCCTCGCG 338
                ||     |||| | ||||| ||||  || ||||| ||| || | || || 
hh00842s1   271 AGGTGGTGGAGCCCGAGGGGCCCGTCGCCCAGCGAGCGGTGAGGCTGGCA 320
             91   V  V  E  P  E  G  P  V  A  Q  R  A  V  R  L  A   106

            301 ----+----*----+----*----+----*----+----*----+----* 350
            113 V  V  E  F  H  L  G  V  N  H  I  D  T  E  E  L  S  129
mbj00660    339 GTGGTCGAGTTCCACCTTGGTGTGAACCACATCGACACGGAGGAACTGTC 388
                ||  ||||||||||||| || ||||||||||||||||||||||| |||||
hh00842s1   321 GTCATCGAGTTCCACCTCGGGGTGAACCACATCGACACGGAGGAGCTGTC 370
            107 V  I  E  F  H  L  G  V  N  H  I  D  T  E  E  L  S  123

            351 ----+----*----+----*----+----*----+----*----+----* 400
            130  A  G  E  E  H  L  V  R  C  L  S  L  L  R  P  Y  R 146
mbj00660    389 TGCCGGCGAGGAGCATCTGGTCAGGTGCCTGTCGTTGCTGCGCCCCTACC 438
                 || || |||||||| ||||| |  ||||||  | ||||||||   ||||
hh00842s1   371 GGCGGGGGAGGAGCACCTGGTGAAATGCCTGCGGCTGCTGCGCAGGTACC 420
            124  A  G  E  E  H  L  V  K  C  L  R  L  L  R  R  Y  R 140

            401 ----+----*----+----*----+----*----+----*----+----* 450
            147   L  S  L  G  C  V  S  L  Y  I  Q  A  Q  N  N  L   162
mbj00660    439 GCCTGTCGCTCGGCTGTGTGTCTCTCTACATCCAGGCGCAGAATAACCTG 488
                | || |||| || |||  | ||||||| ||||||||||||||||||||||
hh00842s1   421 GGCTCTCGCACGACTGCATCTCTCTCTGCATCCAGGCGCAGAATAACCTG 470
            141   L  S  H  D  C  I  S  L  C  I  Q  A  Q  N  N  L   156

            451 ----+----*----+----*----+----*----+----*----+----* 500
            163 G  I  L  W  S  E  R  E  E  I  E  T  A  R  T  Y  L  179
mbj00660    489 GGCATCCTGTGGTCTGAAAGGGAAGAGATCGAAACCGCCCGGACCTACCT 538
                || ||| ||||||||||||| ||||| || ||||| || | | | |||||
hh00842s1   471 GGTATCTTGTGGTCTGAAAGAGAAGAAATTGAAACTGCACAGGCTTACCT 520
            157 G  I  L  W  S  E  R  E  E  I  E  T  A  Q  A  Y  L  173

            501 ----+----*----+----*----+----*----+----*----+----* 550
            180  E  S  S  E  A  L  Y  S  Q  Y  M  K  E  I  G  S  P 196
mbj00660    539 GGAGTCATCGGAAGCCCTGTACAGTCAGTACATGAAAGAGATTGGGAGCC 588
                 |||||||| ||||| || || | |||||| ||||||||| ||||||| |
hh00842s1   521 AGAGTCATCAGAAGCACTATATAATCAGTATATGAAAGAGGTTGGGAGTC 570
            174  E  S  S  E  A  L  Y  N  Q  Y  M  K  E  V  G  S  P 190

            551 ----+----*----+----*----+----*----+----*----+----* 600
            197   P  L  D  P  T  E  H  F  L  P  E  E  E  K  L  T   212
mbj00660    589 CGCCTCTTGACCCGACTGAGCATTTTCTTCCTGAAGAAGAGAAACTTACT 638
                | |||||||| || ||||||| ||||||||||||||||||||||||||||
hh00842s1   571 CTCCTCTTGATCCTACTGAGCGTTTTCTTCCTGAAGAAGAGAAACTTACT 620
            191   P  L  D  P  T  E  R  F  L  P  E  E  E  K  L  T   206

            601 ----+----*----+----*----+----*----+----*----+----* 650
            213 E  Q  E  R  S  K  R  F  E  K  V  Y  T  H  N  L  Y  229
mbj00660    639 GAACAAGAGAGATCAAAAAGATTTGAGAAGGTTTATACTCATAACCTGTA 688
                |||||||||||||||||||||||||| |||||||||||||||||||| ||
hh00842s1   621 GAACAAGAGAGATCAAAAAGATTTGAAAAGGTTTATACTCATAACCTATA 670
            207 E  Q  E  R  S  K  R  F  E  K  V  Y  T  H  N  L  Y  223

            651 ----+----*----+----*----+----*----+----*----+----* 700
            230  Y  L  A  Q  V  Y  Q  H  M  E  M  F  E  K  A  A  H 246
mbj00660    689 TTACCTGGCTCAAGTCTACCAGCACATGGAAATGTTCGAGAAGGCCGCTC 738
                |||||| |||||||||||||||||  |||||||||| |||||||| ||||
hh00842s1   671 TTACCTAGCTCAAGTCTACCAGCATCTGGAAATGTTTGAGAAGGCTGCTC 720
            224  Y  L  A  Q  V  Y  Q  H  L  E  M  F  E  K  A  A  H 240

            701 ----+----*----+----*----+----*----+----*----+----* 750
            247   Y  C  H  S  T  L  K  R  Q  L  E  H  N  A  Y  H   262
mbj00660    739 ATTATTGCCACAGCACACTGAAACGCCAGCTTGAACACAATGCCTACCAC 788
                | |||||||| || ||||| |||||||||||||| |||||||||||||| 
hh00842s1   721 ACTATTGCCATAGTACACTAAAACGCCAGCTTGAGCACAATGCCTACCAT 770
            241   Y  C  H  S  T  L  K  R  Q  L  E  H  N  A  Y  H   256

            751 ----+----*----+----*----+----*----+----*----+----* 800
            263 P  M  E  W  A  I  N  A  A  T  L  S  Q  F  Y  I  N  279
mbj00660    789 CCCATGGAGTGGGCCATCAACGCCGCTACTCTATCACAGTTCTACATCAA 838
                || || |||||||| ||||| || |||||  | |||||||| ||||||||
hh00842s1   771 CCTATAGAGTGGGCTATCAATGCTGCTACCTTGTCACAGTTTTACATCAA 820
            257 P  I  E  W  A  I  N  A  A  T  L  S  Q  F  Y  I  N  273

            801 ----+----*----+----*----+----*----+----*----+----* 850
            280  K  L  C  F  M  E  A  R  H  C  L  S  A  A  N  V  I 296
mbj00660    839 TAAGCTCTGTTTTATGGAAGCCAGACATTGTCTGTCAGCTGCTAATGTTA 888
                |||||| || |||||||| ||||| || ||| | |||||||||||||| |
hh00842s1   821 TAAGCTATGCTTTATGGAGGCCAGGCACTGTTTATCAGCTGCTAATGTCA 870
            274  K  L  C  F  M  E  A  R  H  C  L  S  A  A  N  V  I 290

            851 ----+----*----+----*----+----*----+----*----+----* 900
            297   F  G  Q  T  G  K  I  P  A  T  E  D  T  P  E  V   312
mbj00660    889 TTTTTGGTCAAACTGGAAAAATACCAGCTACAGAAGACACTCCTGAAGTT 938
                ||||||||||||||||||| ||  |||| ||||||||||||||||||| |
hh00842s1   871 TTTTTGGTCAAACTGGAAAGATCTCAGCCACAGAAGACACTCCTGAAGCT 920
            291   F  G  Q  T  G  K  I  S  A  T  E  D  T  P  E  A   306

            901 ----+----*----+----*----+----*----+----*----+----* 950
            313 E  G  D  V  P  E  L  Y  H  Q  R  K  G  E  I  A  R  329
mbj00660    939 GAAGGAGACGTGCCAGAGCTTTACCATCAGAGGAAAGGGGAAATAGCAAG 988
                |||||||| |||||||||||||| ||||| || || ||||||||||||||
hh00842s1   921 GAAGGAGAAGTGCCAGAGCTTTATCATCAAAGAAAGGGGGAAATAGCAAG 970
            307 E  G  E  V  P  E  L  Y  H  Q  R  K  G  E  I  A  R  323

            951 ----+----*----+----*----+----*----+----*----+----* 1000
            330  C  W  I  K  Y  C  L  T  L  M  Q  N  A  Q  L  S  M 346
mbj00660    989 ATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCA 1038
                 ||||||||||| |||||  ||||||| ||||| || || || |||||||
hh00842s1   971 GTGCTGGATCAAATACTGTTTGACTCTCATGCAGAATGCCCAACTCTCCA 1020
            324  C  W  I  K  Y  C  L  T  L  M  Q  N  A  Q  L  S  M 340

           1001 ----+----*----+----*----+----*----+----*----+----* 1050
            347   Q  D  N  I  G  E  L  D  L  D  K  Q  S  E  L  R   362
mbj00660   1039 TGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGA 1088
                ||||||||||||||||||||||||| || || || ||||| || || |||
hh00842s1  1021 TGCAGGACAACATAGGAGAGCTTGATCTTGATAAACAGTCTGAACTTAGA 1070
            341   Q  D  N  I  G  E  L  D  L  D  K  Q  S  E  L  R   356

           1051 ----+----*----+----*----+----*----+----*----+----* 1100
            363 A  L  R  K  K  E  L  D  E  E  E  S  V  R  K  R  A  379
mbj00660   1089 GCTCTACGCAAGAAGGAGCTAGATGAGGAGGAGAGCGTCAGGAAAAGGGC 1138
                ||| || | || || || |||||||||||||| ||| |  ||||||  ||
hh00842s1  1071 GCTTTAAGGAAAAAAGAACTAGATGAGGAGGAAAGCATTCGGAAAAAAGC 1120
            357 A  L  R  K  K  E  L  D  E  E  E  S  I  R  K  K  A  373

           1101 ----+----*----+----*----+----*----+----*----+----* 1150
            380  V  Q  F  G  T  G  E  L  C  D  A  I  S  A  V  E  E 396
mbj00660   1139 TGTGCAGTTTGGAACTGGGGAGCTGTGCGACGCCATCTCTGCAGTGGAGG 1188
                ||||||||||||||| || || ||||| || |||||||||||||| || |
hh00842s1  1121 TGTGCAGTTTGGAACCGGTGAACTGTGTGATGCCATCTCTGCAGTAGAAG 1170
            374  V  Q  F  G  T  G  E  L  C  D  A  I  S  A  V  E  E 390

           1151 ----+----*----+----*----+----*----+----*----+----* 1200
            397   K  V  R  Y  L  R  P  L  D  F  E  E  A  R  E  L   412
mbj00660   1189 AGAAAGTGAGATACTTGAGGCCCTTAGATTTTGAAGAAGCCAGGGAGCTT 1238
                |||||||||| |||||||| || |||||||||||||||||||| || |||
hh00842s1  1171 AGAAAGTGAGCTACTTGAGACCTTTAGATTTTGAAGAAGCCAGAGAACTT 1220
            391   K  V  S  Y  L  R  P  L  D  F  E  E  A  R  E  L   406

           1201 ----+----*----+----*----+----*----+----*----+----* 1250
            413 F  L  L  G  Q  H  Y  V  C  E  A  K  E  F  F  Q  I  429
mbj00660   1239 TTCCTGCTGGGTCAGCACTATGTGTGTGAGGCAAAGGAGTTCTTCCAGAT 1288
                ||| |  |||||||||||||||| | ||||||||| |||||||| |||||
hh00842s1  1221 TTCTTATTGGGTCAGCACTATGTCTTTGAGGCAAAAGAGTTCTTTCAGAT 1270
            407 F  L  L  G  Q  H  Y  V  F  E  A  K  E  F  F  Q  I  423

           1251 ----+----*----+----*----+----*----+----*----+----* 1300
            430  D  G  Y  V  T  D  H  I  E  V  V  Q  D  H  S  A  L 446
mbj00660   1289 CGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTC 1338
                 ||||| |||||||||||||| |||||||||||||| |||||||| ||||
hh00842s1  1271 TGATGGTTATGTCACTGACCATATTGAAGTTGTCCAAGACCACAGTGCTC 1320
            424  D  G  Y  V  T  D  H  I  E  V  V  Q  D  H  S  A  L 440

           1301 ----+----*----+----*----+----*----+----*----+----* 1350
            447   F  K  V  L  S  F  F  E  A  D  M  E  R  R  C  K   462
mbj00660   1339 TGTTCAAGGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAG 1388
                |||| ||||||||  | ||||||||  |||||||||||||||||||||||
hh00842s1  1321 TGTTTAAGGTGCTTGCATTCTTTGAAACTGACATGGAGAGACGGTGCAAG 1370
            441   F  K  V  L  A  F  F  E  T  D  M  E  R  R  C  K   456

           1351 ----+----*----+----*----+----*----+----*----+----* 1400
            463 M  H  K  R  R  I  A  M  L  E  P  L  T  V  D  L  N  479
mbj00660   1389 ATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGAA 1438
                ||||| || ||||| |||||||||||||||||||| ||||| ||||||||
hh00842s1  1371 ATGCATAAACGCAGAATAGCCATGCTAGAGCCCCTAACTGTAGACCTGAA 1420
            457 M  H  K  R  R  I  A  M  L  E  P  L  T  V  D  L  N  473

           1401 ----+----*----+----*----+----*----+----*----+----* 1450
            480  P  Q  Y  Y  L  L  V  S  R  Q  I  Q  F  E  I  A  H 496
mbj00660   1439 CCCACAGTACTACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCAC 1488
                 |||||||| || |||||||||| ||| ||||| ||||||||||| ||||
hh00842s1  1421 TCCACAGTATTATCTGTTGGTCAACAGACAGATCCAGTTTGAAATTGCAC 1470
            474  P  Q  Y  Y  L  L  V  N  R  Q  I  Q  F  E  I  A  H 490

           1451 ----+----*----+----*----+----*----+----*----+----* 1500
            497   A  Y  Y  D  M  M  D  L  K  V  A  I  A  D  K  L   512
mbj00660   1489 ACGCGTACTATGACATGATGGACTTGAAGGTCGCCATTGCTGACAAGCTC 1538
                | || |||||||| |||||||| |||||||| ||||||||||||| ||| 
hh00842s1  1471 ATGCTTACTATGATATGATGGATTTGAAGGTTGCCATTGCTGACAGGCTA 1520
            491   A  Y  Y  D  M  M  D  L  K  V  A  I  A  D  R  L   506

           1501 ----+----*----+----*----+----*----+----*----+----* 1550
            513 R  D  P  D  S  H  I  V  K  K  I  N  S  L  N  K  S  529
mbj00660   1539 AGGGACCCCGACTCACACATTGTCAAAAAAATAAATAGCCTGAATAAGTC 1588
                ||||| || || ||||||||||| |||||||||||||  || ||||||||
hh00842s1  1521 AGGGATCCTGATTCACACATTGTAAAAAAAATAAATAATCTTAATAAGTC 1570
            507 R  D  P  D  S  H  I  V  K  K  I  N  N  L  N  K  S  523

           1551 ----+----*----+----*----+----*----+----*----+----* 1600
            530  A  L  K  Y  Y  Q  L  F  L  D  S  L  R  D  P  N  K 546
mbj00660   1589 GGCACTCAAGTACTACCAGCTCTTCCTAGACTCCCTGAGAGACCCAAACA 1638
                 ||||| |||||||||||||||||| |||||||||||||||||||||| |
hh00842s1  1571 AGCACTGAAGTACTACCAGCTCTTCTTAGACTCCCTGAGAGACCCAAATA 1620
            524  A  L  K  Y  Y  Q  L  F  L  D  S  L  R  D  P  N  K 540

           1601 ----+----*----+----*----+----*----+----*----+----* 1650
            547   V  F  P  E  H  I  G  E  D  V  L  R  P  A  M  L   562
mbj00660   1639 AAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCGCCCGGCCATGTTA 1688
                |||| || |||||||| || |||||||| || || ||||| |||||||||
hh00842s1  1621 AAGTATTCCCTGAGCATATAGGGGAAGATGTTCTTCGCCCTGCCATGTTA 1670
            541   V  F  P  E  H  I  G  E  D  V  L  R  P  A  M  L   556

           1651 ----+----*----+----*----+----*----+----*----+----* 1700
            563 A  K  F  R  V  A  R  L  Y  G  K  I  I  T  A  D  P  579
mbj00660   1689 GCTAAATTCCGGGTAGCTCGTCTGTATGGCAAAATCATCACTGCAGATCC 1738
                ||||| || || || || ||||| |||||||||||||| |||||||||||
hh00842s1  1671 GCTAAGTTTCGAGTTGCCCGTCTCTATGGCAAAATCATTACTGCAGATCC 1720
            557 A  K  F  R  V  A  R  L  Y  G  K  I  I  T  A  D  P  573

           1701 ----+----*----+----*----+----*----+----*----+----* 1750
            580  K  K  E  L  E  N  L  A  T  S  L  E  H  Y  K  F  I 596
mbj00660   1739 CAAGAAAGAGCTAGAGAATTTGGCAACATCTTTGGAACATTACAAATTTA 1788
                |||||||||||| || |||||||||||||| |||||||||||||||||||
hh00842s1  1721 CAAGAAAGAGCTGGAAAATTTGGCAACATCATTGGAACATTACAAATTTA 1770
            574  K  K  E  L  E  N  L  A  T  S  L  E  H  Y  K  F  I 590

           1751 ----+----*----+----*----+----*----+----*----+----* 1800
            597   V  D  Y  C  E  T  H  P  E  A  A  Q  E  I  E  V   612
mbj00660   1789 TTGTTGATTACTGTGAAACTCACCCCGAGGCTGCCCAGGAAATAGAGGTT 1838
                ||||||||||||||||||  || || ||||| |||||||||||||| |||
hh00842s1  1771 TTGTTGATTACTGTGAAAAGCATCCTGAGGCCGCCCAGGAAATAGAAGTT 1820
            591   V  D  Y  C  E  K  H  P  E  A  A  Q  E  I  E  V   606

           1801 ----+----*----+----*----+----*----+----*----+----* 1850
            613 E  L  E  L  S  K  E  M  V  S  L  L  P  T  K  M  E  629
mbj00660   1839 GAGTTAGAACTTAGTAAAGAGATGGTCAGTCTCCTCCCAACAAAAATGGA 1888
                ||| |||||||||||||||||||||| ||||| |||||||||||||||||
hh00842s1  1821 GAGCTAGAACTTAGTAAAGAGATGGTTAGTCTTCTCCCAACAAAAATGGA 1870
            607 E  L  E  L  S  K  E  M  V  S  L  L  P  T  K  M  E  623

           1851 ----+----*----+----*----+----*- 1881
            630  R  F  R  A  K  M  A  L  T  *   639
mbj00660   1889 GAGGTTCAGAGCCAAGATGGCCCTGACCTAA 1919
                ||| |||||| |||||||||||||||| |||
hh00842s1  1871 GAGATTCAGAACCAAGATGGCCCTGACTTAA 1901
            624  R  F  R  T  K  M  A  L  T  *   633


*--[ 3'UTR ]--*
              1 ----+----*----+----*----+----*----+----*----+----* 50
mbj00660   1920 GCCTTG..GTCAAAGGAAAGAGACGTGCAGCTTGAAGCCACTCCCCTCCC 1967
                 |||||   | |||| || || | |||||   |  |     ||   | ||
hh00842s1  1902 TCCTTGTTTTTAAAGAAAGGAAATGTGCAATATTGAAGTGATCTTTTTCC 1951

             51 ----+----*----+----*----+----*----+----*----+----* 100
mbj00660   1968 CTATAGCAAATGAGGCCCAGCCCCACAGTCACCTTCGCC...AGGGCCAG 2014
                |||  |  |   |||||||   |||  || |  ||  ||   |  |||||
hh00842s1  1952 CTA..GTCAGACAGGCCCAATTCCATTGTGATGTTTACCTTTATAGCCAG 1999

            101 ----+----*----+----*----+----*----+----*----+----* 150
mbj00660   2015 AGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTATGCTA 2064
                  |  |||| | ||  ||  |||  ||| |    | | |||| | |||||
hh00842s1  2000 GTGAGTGCAGTTTGAACTTGAGATACAGTC....AACTGAGTGTTTGCTA 2045

            151 ----+----*----+----*----+----*----+----*----+----* 200
mbj00660   2065 GGACCTTAAGCACCATA.....AATTAATAATTTATACCTAATTATGTAA 2109
                ||| | |||| | ||||     |||||| || ||| ||||||||||||||
hh00842s1  2046 GGATCCTAAGGAACATAAAGTTAATTAAAAACTTACACCTAATTATGTAA 2095

            201 ----+----*----+----*----+----*----+----*----+----* 250
mbj00660   2110 GTTGCCTTGCTAAAGTGACAGGTGTTTTGCATTTTCGATCGCTTGTTTTC 2159
                 |||||||| ||||  |||| ||| |||| ||||| ||| ||||| ||||
hh00842s1  2096 ATTGCCTTGTTAAA..GACATGTGATTTGTATTTTAGAT.GCTTG.TTTC 2141

            251 ----+----*----+----*----+----*----+----*----+----* 300
mbj00660   2160 CTGTTTAAGTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTT 2209
                || || || || | |||| ||   |||    ||||||||||  | |  ||
hh00842s1  2142 CTATTAAAATACAGACATTTCTACCCTCAGTTTCTAAATGTAGACTATTT 2191

            301 ----+----*----+----*----+----*----+----*----+----* 350
mbj00660   2210 GCTGAC.AGTACTTGTTAGATTTCATACTAGGAACAACACTGGGTAGTGT 2258
                | || | |||||||| |||||| | |   || || ||  ||||||| |||
hh00842s1  2192 GTTGGCTAGTACTTGATAGATTCCTTGTAAGAAAAAATGCTGGGTAATGT 2241

            351 ----+----*----+----*----+----*----+----*----+----* 400
mbj00660   2259 ACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAAAGTCACTTCAG 2308
                |||||||| |  ||||||||  | | || |   ||| ||||| |||||  
hh00842s1  2242 ACCTGGTA.ACAAGCCTGTTAATATATTAAGATTGAAAAAGTAACTTCTA 2290

            401 ----+----*----+----*----+----*----+----*----+----* 450
mbj00660   2309 ATGTCATTCTTTGTAAAATACTTACTTTCTTAAACTCC.....AAATAAA 2353
                  || | || || ||||||| ||   ||| || | |||         |||
hh00842s1  2291 TAGTTACTCCTTCTAAAATATTTGACTTCCTACATTCCCCCCACCCAAAA 2340

            451 ----+----*----+----*----+----*----+----*----+----* 500
mbj00660   2354 TCTTTCCCTTTTGAAAAT................................ 2371
                ||||||||||||||||||                                
hh00842s1  2341 TCTTTCCCTTTTGAAAATACTAAAAACTAAGTTATGTTATTATAAAGTGT 2390

            501 ----+----*----+----*----+----*----+----*----+----* 550
mbj00660   2371 .................................................. 2371
                                                                  
hh00842s1  2391 AAAATGGTTTGTCTTAATTATAGGAGAAAAAGGCCTTGTTAGAAATAAAA 2440

            551 ----+----*----+----*--- 573
mbj00660   2371 ....................... 2371
                                       
hh00842s1  2441 TAAACTGACTTATTTCACTAATG 2463