Comparison of KIAA cDNA sequences between mouse and human (KIAA1279)

<<Original sequence data>>

mouse  mKIAA1279 (mbj00660)     length:   2371 bp, CDS:     3 -  1919
human    hh00842s1  length:   2463 bp, CDS:     3 -  1901


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     31 -    32       2        0      0.0
  CDS:     33 -  1931    1601      288      15.2
3'UTR:   1932 -  2399     311      141      31.2

amino acid

  CDS:     33 -  1931     569       64      10.1
----------------------------------------------------------


<<Alignment>>

              1 ----+----*----+----*----+----*----+----*----+----* 50
                                                R  T  G  R  R  P  
mbj00660      1 CAACGCGGAGGCCTCCAGTGGCTGCTGGTCCACGGACGGGGAGGCGGCCG 50
                                              ||   |  | |    | | |
hh00842s1     1 ..............................CAAACATTGAGGAAAGCCAG 20
                                                N  I  E  E  S  Q  

             51 ----+----*----+----*----+----*----+----*----+----* 100
                S  A  Q  A  A  M  A  N  A  P  G  P  E  I  R  E  K 
mbj00660     51 TCAGCTCAGGCCGCGATGGCGAACGCTCCGGGGCCAGAGATCCGCGAGAA 100
                 |||   ||||||| |||||||||| |||| || ||||| || |||||||
hh00842s1    21 GCAGTAGAGGCCGCTATGGCGAACGTTCCGTGGGCAGAGGTCTGCGAGAA 70
                A  V  E  A  A  M  A  N  V  P  W  A  E  V  C  E  K 

            101 ----+----*----+----*----+----*----+----*----+----* 150
                 F  Q  A  A  L  A  L  S  R  V  E  L  H  K  N  P  E
mbj00660    101 GTTCCAGGCAGCGCTGGCCCTGTCGCGGGTGGAGCTGCACAAGAACCCGG 150
                 |||||||| ||||| || |||||||||||||| ||||| || || ||||
hh00842s1    71 ATTCCAGGCGGCGCTCGCTCTGTCGCGGGTGGAACTGCATAAAAATCCGG 120
                 F  Q  A  A  L  A  L  S  R  V  E  L  H  K  N  P  E

            151 ----+----*----+----*----+----*----+----*----+----* 200
                  K  E  P  Y  K  S  K  Y  G  A  R  A  L  L  E  E  
mbj00660    151 AGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAG 200
                ||||||| || ||||||||||| ||| |||| || |||||  |||| |||
hh00842s1   121 AGAAGGAACCATACAAGTCCAAATACAGCGCCCGGGCGCTACTGGAAGAG 170
                  K  E  P  Y  K  S  K  Y  S  A  R  A  L  L  E  E  

            201 ----+----*----+----*----+----*----+----*----+----* 250
                V  R  A  L  L  G  P  A  P  E  D  E  D  E  P  A  A 
mbj00660    201 GTGCGCGCGCTGCTGGGCCCGGCGCCCGAGGACGAGGACGAGCCGGCTGC 250
                ||    |||||||| ||||| ||||| ||||||||||| |||| | ||| 
hh00842s1   171 GTCAAGGCGCTGCTCGGCCCTGCGCCTGAGGACGAGGATGAGCGGCCTGA 220
                V  K  A  L  L  G  P  A  P  E  D  E  D  E  R  P  E 

            251 ----+----*----+----*----+----*----+----*----+----* 300
                 D  -           G  P  G  D  Q  A  L  -     A  G  E
mbj00660    251 TGACGA.........TGGGCCGGGCGACCAGGCCTTGGG...CGCGGGTG 288
                 | |||          ||  | || ||||| ||| ||||     ||| ||
hh00842s1   221 GGCCGAGGACAGCCCGGGTGCCGGTGACCACGCCCTGGGGCTGCCGGCTG 270
                 A  E  D  S  P  G  A  G  D  H  A  L  G  L  P  A  E

            301 ----+----*----+----*----+----*----+----*----+----* 350
                  P  R  E  A  E  G  P  G  A  Q  R  A  L  R  L  A  
mbj00660    289 AGCCCCGGGAGGCTGAGGGCCCCGGAGCGCAGCGGGCGCTGCGCCTCGCG 338
                ||     |||| | ||||| ||||  || ||||| ||| || | || || 
hh00842s1   271 AGGTGGTGGAGCCCGAGGGGCCCGTCGCCCAGCGAGCGGTGAGGCTGGCA 320
                  V  V  E  P  E  G  P  V  A  Q  R  A  V  R  L  A  

            351 ----+----*----+----*----+----*----+----*----+----* 400
                V  V  E  F  H  L  G  V  N  H  I  D  T  E  E  L  S 
mbj00660    339 GTGGTCGAGTTCCACCTTGGTGTGAACCACATCGACACGGAGGAACTGTC 388
                ||  ||||||||||||| || ||||||||||||||||||||||| |||||
hh00842s1   321 GTCATCGAGTTCCACCTCGGGGTGAACCACATCGACACGGAGGAGCTGTC 370
                V  I  E  F  H  L  G  V  N  H  I  D  T  E  E  L  S 

            401 ----+----*----+----*----+----*----+----*----+----* 450
                 A  G  E  E  H  L  V  R  C  L  S  L  L  R  P  Y  R
mbj00660    389 TGCCGGCGAGGAGCATCTGGTCAGGTGCCTGTCGTTGCTGCGCCCCTACC 438
                 || || |||||||| ||||| |  ||||||  | ||||||||   ||||
hh00842s1   371 GGCGGGGGAGGAGCACCTGGTGAAATGCCTGCGGCTGCTGCGCAGGTACC 420
                 A  G  E  E  H  L  V  K  C  L  R  L  L  R  R  Y  R

            451 ----+----*----+----*----+----*----+----*----+----* 500
                  L  S  L  G  C  V  S  L  Y  I  Q  A  Q  N  N  L  
mbj00660    439 GCCTGTCGCTCGGCTGTGTGTCTCTCTACATCCAGGCGCAGAATAACCTG 488
                | || |||| || |||  | ||||||| ||||||||||||||||||||||
hh00842s1   421 GGCTCTCGCACGACTGCATCTCTCTCTGCATCCAGGCGCAGAATAACCTG 470
                  L  S  H  D  C  I  S  L  C  I  Q  A  Q  N  N  L  

            501 ----+----*----+----*----+----*----+----*----+----* 550
                G  I  L  W  S  E  R  E  E  I  E  T  A  R  T  Y  L 
mbj00660    489 GGCATCCTGTGGTCTGAAAGGGAAGAGATCGAAACCGCCCGGACCTACCT 538
                || ||| ||||||||||||| ||||| || ||||| || | | | |||||
hh00842s1   471 GGTATCTTGTGGTCTGAAAGAGAAGAAATTGAAACTGCACAGGCTTACCT 520
                G  I  L  W  S  E  R  E  E  I  E  T  A  Q  A  Y  L 

            551 ----+----*----+----*----+----*----+----*----+----* 600
                 E  S  S  E  A  L  Y  S  Q  Y  M  K  E  I  G  S  P
mbj00660    539 GGAGTCATCGGAAGCCCTGTACAGTCAGTACATGAAAGAGATTGGGAGCC 588
                 |||||||| ||||| || || | |||||| ||||||||| ||||||| |
hh00842s1   521 AGAGTCATCAGAAGCACTATATAATCAGTATATGAAAGAGGTTGGGAGTC 570
                 E  S  S  E  A  L  Y  N  Q  Y  M  K  E  V  G  S  P

            601 ----+----*----+----*----+----*----+----*----+----* 650
                  P  L  D  P  T  E  H  F  L  P  E  E  E  K  L  T  
mbj00660    589 CGCCTCTTGACCCGACTGAGCATTTTCTTCCTGAAGAAGAGAAACTTACT 638
                | |||||||| || ||||||| ||||||||||||||||||||||||||||
hh00842s1   571 CTCCTCTTGATCCTACTGAGCGTTTTCTTCCTGAAGAAGAGAAACTTACT 620
                  P  L  D  P  T  E  R  F  L  P  E  E  E  K  L  T  

            651 ----+----*----+----*----+----*----+----*----+----* 700
                E  Q  E  R  S  K  R  F  E  K  V  Y  T  H  N  L  Y 
mbj00660    639 GAACAAGAGAGATCAAAAAGATTTGAGAAGGTTTATACTCATAACCTGTA 688
                |||||||||||||||||||||||||| |||||||||||||||||||| ||
hh00842s1   621 GAACAAGAGAGATCAAAAAGATTTGAAAAGGTTTATACTCATAACCTATA 670
                E  Q  E  R  S  K  R  F  E  K  V  Y  T  H  N  L  Y 

            701 ----+----*----+----*----+----*----+----*----+----* 750
                 Y  L  A  Q  V  Y  Q  H  M  E  M  F  E  K  A  A  H
mbj00660    689 TTACCTGGCTCAAGTCTACCAGCACATGGAAATGTTCGAGAAGGCCGCTC 738
                |||||| |||||||||||||||||  |||||||||| |||||||| ||||
hh00842s1   671 TTACCTAGCTCAAGTCTACCAGCATCTGGAAATGTTTGAGAAGGCTGCTC 720
                 Y  L  A  Q  V  Y  Q  H  L  E  M  F  E  K  A  A  H

            751 ----+----*----+----*----+----*----+----*----+----* 800
                  Y  C  H  S  T  L  K  R  Q  L  E  H  N  A  Y  H  
mbj00660    739 ATTATTGCCACAGCACACTGAAACGCCAGCTTGAACACAATGCCTACCAC 788
                | |||||||| || ||||| |||||||||||||| |||||||||||||| 
hh00842s1   721 ACTATTGCCATAGTACACTAAAACGCCAGCTTGAGCACAATGCCTACCAT 770
                  Y  C  H  S  T  L  K  R  Q  L  E  H  N  A  Y  H  

            801 ----+----*----+----*----+----*----+----*----+----* 850
                P  M  E  W  A  I  N  A  A  T  L  S  Q  F  Y  I  N 
mbj00660    789 CCCATGGAGTGGGCCATCAACGCCGCTACTCTATCACAGTTCTACATCAA 838
                || || |||||||| ||||| || |||||  | |||||||| ||||||||
hh00842s1   771 CCTATAGAGTGGGCTATCAATGCTGCTACCTTGTCACAGTTTTACATCAA 820
                P  I  E  W  A  I  N  A  A  T  L  S  Q  F  Y  I  N 

            851 ----+----*----+----*----+----*----+----*----+----* 900
                 K  L  C  F  M  E  A  R  H  C  L  S  A  A  N  V  I
mbj00660    839 TAAGCTCTGTTTTATGGAAGCCAGACATTGTCTGTCAGCTGCTAATGTTA 888
                |||||| || |||||||| ||||| || ||| | |||||||||||||| |
hh00842s1   821 TAAGCTATGCTTTATGGAGGCCAGGCACTGTTTATCAGCTGCTAATGTCA 870
                 K  L  C  F  M  E  A  R  H  C  L  S  A  A  N  V  I

            901 ----+----*----+----*----+----*----+----*----+----* 950
                  F  G  Q  T  G  K  I  P  A  T  E  D  T  P  E  V  
mbj00660    889 TTTTTGGTCAAACTGGAAAAATACCAGCTACAGAAGACACTCCTGAAGTT 938
                ||||||||||||||||||| ||  |||| ||||||||||||||||||| |
hh00842s1   871 TTTTTGGTCAAACTGGAAAGATCTCAGCCACAGAAGACACTCCTGAAGCT 920
                  F  G  Q  T  G  K  I  S  A  T  E  D  T  P  E  A  

            951 ----+----*----+----*----+----*----+----*----+----* 1000
                E  G  D  V  P  E  L  Y  H  Q  R  K  G  E  I  A  R 
mbj00660    939 GAAGGAGACGTGCCAGAGCTTTACCATCAGAGGAAAGGGGAAATAGCAAG 988
                |||||||| |||||||||||||| ||||| || || ||||||||||||||
hh00842s1   921 GAAGGAGAAGTGCCAGAGCTTTATCATCAAAGAAAGGGGGAAATAGCAAG 970
                E  G  E  V  P  E  L  Y  H  Q  R  K  G  E  I  A  R 

           1001 ----+----*----+----*----+----*----+----*----+----* 1050
                 C  W  I  K  Y  C  L  T  L  M  Q  N  A  Q  L  S  M
mbj00660    989 ATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCA 1038
                 ||||||||||| |||||  ||||||| ||||| || || || |||||||
hh00842s1   971 GTGCTGGATCAAATACTGTTTGACTCTCATGCAGAATGCCCAACTCTCCA 1020
                 C  W  I  K  Y  C  L  T  L  M  Q  N  A  Q  L  S  M

           1051 ----+----*----+----*----+----*----+----*----+----* 1100
                  Q  D  N  I  G  E  L  D  L  D  K  Q  S  E  L  R  
mbj00660   1039 TGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGA 1088
                ||||||||||||||||||||||||| || || || ||||| || || |||
hh00842s1  1021 TGCAGGACAACATAGGAGAGCTTGATCTTGATAAACAGTCTGAACTTAGA 1070
                  Q  D  N  I  G  E  L  D  L  D  K  Q  S  E  L  R  

           1101 ----+----*----+----*----+----*----+----*----+----* 1150
                A  L  R  K  K  E  L  D  E  E  E  S  V  R  K  R  A 
mbj00660   1089 GCTCTACGCAAGAAGGAGCTAGATGAGGAGGAGAGCGTCAGGAAAAGGGC 1138
                ||| || | || || || |||||||||||||| ||| |  ||||||  ||
hh00842s1  1071 GCTTTAAGGAAAAAAGAACTAGATGAGGAGGAAAGCATTCGGAAAAAAGC 1120
                A  L  R  K  K  E  L  D  E  E  E  S  I  R  K  K  A 

           1151 ----+----*----+----*----+----*----+----*----+----* 1200
                 V  Q  F  G  T  G  E  L  C  D  A  I  S  A  V  E  E
mbj00660   1139 TGTGCAGTTTGGAACTGGGGAGCTGTGCGACGCCATCTCTGCAGTGGAGG 1188
                ||||||||||||||| || || ||||| || |||||||||||||| || |
hh00842s1  1121 TGTGCAGTTTGGAACCGGTGAACTGTGTGATGCCATCTCTGCAGTAGAAG 1170
                 V  Q  F  G  T  G  E  L  C  D  A  I  S  A  V  E  E

           1201 ----+----*----+----*----+----*----+----*----+----* 1250
                  K  V  R  Y  L  R  P  L  D  F  E  E  A  R  E  L  
mbj00660   1189 AGAAAGTGAGATACTTGAGGCCCTTAGATTTTGAAGAAGCCAGGGAGCTT 1238
                |||||||||| |||||||| || |||||||||||||||||||| || |||
hh00842s1  1171 AGAAAGTGAGCTACTTGAGACCTTTAGATTTTGAAGAAGCCAGAGAACTT 1220
                  K  V  S  Y  L  R  P  L  D  F  E  E  A  R  E  L  

           1251 ----+----*----+----*----+----*----+----*----+----* 1300
                F  L  L  G  Q  H  Y  V  C  E  A  K  E  F  F  Q  I 
mbj00660   1239 TTCCTGCTGGGTCAGCACTATGTGTGTGAGGCAAAGGAGTTCTTCCAGAT 1288
                ||| |  |||||||||||||||| | ||||||||| |||||||| |||||
hh00842s1  1221 TTCTTATTGGGTCAGCACTATGTCTTTGAGGCAAAAGAGTTCTTTCAGAT 1270
                F  L  L  G  Q  H  Y  V  F  E  A  K  E  F  F  Q  I 

           1301 ----+----*----+----*----+----*----+----*----+----* 1350
                 D  G  Y  V  T  D  H  I  E  V  V  Q  D  H  S  A  L
mbj00660   1289 CGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTC 1338
                 ||||| |||||||||||||| |||||||||||||| |||||||| ||||
hh00842s1  1271 TGATGGTTATGTCACTGACCATATTGAAGTTGTCCAAGACCACAGTGCTC 1320
                 D  G  Y  V  T  D  H  I  E  V  V  Q  D  H  S  A  L

           1351 ----+----*----+----*----+----*----+----*----+----* 1400
                  F  K  V  L  S  F  F  E  A  D  M  E  R  R  C  K  
mbj00660   1339 TGTTCAAGGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAG 1388
                |||| ||||||||  | ||||||||  |||||||||||||||||||||||
hh00842s1  1321 TGTTTAAGGTGCTTGCATTCTTTGAAACTGACATGGAGAGACGGTGCAAG 1370
                  F  K  V  L  A  F  F  E  T  D  M  E  R  R  C  K  

           1401 ----+----*----+----*----+----*----+----*----+----* 1450
                M  H  K  R  R  I  A  M  L  E  P  L  T  V  D  L  N 
mbj00660   1389 ATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGAA 1438
                ||||| || ||||| |||||||||||||||||||| ||||| ||||||||
hh00842s1  1371 ATGCATAAACGCAGAATAGCCATGCTAGAGCCCCTAACTGTAGACCTGAA 1420
                M  H  K  R  R  I  A  M  L  E  P  L  T  V  D  L  N 

           1451 ----+----*----+----*----+----*----+----*----+----* 1500
                 P  Q  Y  Y  L  L  V  S  R  Q  I  Q  F  E  I  A  H
mbj00660   1439 CCCACAGTACTACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCAC 1488
                 |||||||| || |||||||||| ||| ||||| ||||||||||| ||||
hh00842s1  1421 TCCACAGTATTATCTGTTGGTCAACAGACAGATCCAGTTTGAAATTGCAC 1470
                 P  Q  Y  Y  L  L  V  N  R  Q  I  Q  F  E  I  A  H

           1501 ----+----*----+----*----+----*----+----*----+----* 1550
                  A  Y  Y  D  M  M  D  L  K  V  A  I  A  D  K  L  
mbj00660   1489 ACGCGTACTATGACATGATGGACTTGAAGGTCGCCATTGCTGACAAGCTC 1538
                | || |||||||| |||||||| |||||||| ||||||||||||| ||| 
hh00842s1  1471 ATGCTTACTATGATATGATGGATTTGAAGGTTGCCATTGCTGACAGGCTA 1520
                  A  Y  Y  D  M  M  D  L  K  V  A  I  A  D  R  L  

           1551 ----+----*----+----*----+----*----+----*----+----* 1600
                R  D  P  D  S  H  I  V  K  K  I  N  S  L  N  K  S 
mbj00660   1539 AGGGACCCCGACTCACACATTGTCAAAAAAATAAATAGCCTGAATAAGTC 1588
                ||||| || || ||||||||||| |||||||||||||  || ||||||||
hh00842s1  1521 AGGGATCCTGATTCACACATTGTAAAAAAAATAAATAATCTTAATAAGTC 1570
                R  D  P  D  S  H  I  V  K  K  I  N  N  L  N  K  S 

           1601 ----+----*----+----*----+----*----+----*----+----* 1650
                 A  L  K  Y  Y  Q  L  F  L  D  S  L  R  D  P  N  K
mbj00660   1589 GGCACTCAAGTACTACCAGCTCTTCCTAGACTCCCTGAGAGACCCAAACA 1638
                 ||||| |||||||||||||||||| |||||||||||||||||||||| |
hh00842s1  1571 AGCACTGAAGTACTACCAGCTCTTCTTAGACTCCCTGAGAGACCCAAATA 1620
                 A  L  K  Y  Y  Q  L  F  L  D  S  L  R  D  P  N  K

           1651 ----+----*----+----*----+----*----+----*----+----* 1700
                  V  F  P  E  H  I  G  E  D  V  L  R  P  A  M  L  
mbj00660   1639 AAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCGCCCGGCCATGTTA 1688
                |||| || |||||||| || |||||||| || || ||||| |||||||||
hh00842s1  1621 AAGTATTCCCTGAGCATATAGGGGAAGATGTTCTTCGCCCTGCCATGTTA 1670
                  V  F  P  E  H  I  G  E  D  V  L  R  P  A  M  L  

           1701 ----+----*----+----*----+----*----+----*----+----* 1750
                A  K  F  R  V  A  R  L  Y  G  K  I  I  T  A  D  P 
mbj00660   1689 GCTAAATTCCGGGTAGCTCGTCTGTATGGCAAAATCATCACTGCAGATCC 1738
                ||||| || || || || ||||| |||||||||||||| |||||||||||
hh00842s1  1671 GCTAAGTTTCGAGTTGCCCGTCTCTATGGCAAAATCATTACTGCAGATCC 1720
                A  K  F  R  V  A  R  L  Y  G  K  I  I  T  A  D  P 

           1751 ----+----*----+----*----+----*----+----*----+----* 1800
                 K  K  E  L  E  N  L  A  T  S  L  E  H  Y  K  F  I
mbj00660   1739 CAAGAAAGAGCTAGAGAATTTGGCAACATCTTTGGAACATTACAAATTTA 1788
                |||||||||||| || |||||||||||||| |||||||||||||||||||
hh00842s1  1721 CAAGAAAGAGCTGGAAAATTTGGCAACATCATTGGAACATTACAAATTTA 1770
                 K  K  E  L  E  N  L  A  T  S  L  E  H  Y  K  F  I

           1801 ----+----*----+----*----+----*----+----*----+----* 1850
                  V  D  Y  C  E  T  H  P  E  A  A  Q  E  I  E  V  
mbj00660   1789 TTGTTGATTACTGTGAAACTCACCCCGAGGCTGCCCAGGAAATAGAGGTT 1838
                ||||||||||||||||||  || || ||||| |||||||||||||| |||
hh00842s1  1771 TTGTTGATTACTGTGAAAAGCATCCTGAGGCCGCCCAGGAAATAGAAGTT 1820
                  V  D  Y  C  E  K  H  P  E  A  A  Q  E  I  E  V  

           1851 ----+----*----+----*----+----*----+----*----+----* 1900
                E  L  E  L  S  K  E  M  V  S  L  L  P  T  K  M  E 
mbj00660   1839 GAGTTAGAACTTAGTAAAGAGATGGTCAGTCTCCTCCCAACAAAAATGGA 1888
                ||| |||||||||||||||||||||| ||||| |||||||||||||||||
hh00842s1  1821 GAGCTAGAACTTAGTAAAGAGATGGTTAGTCTTCTCCCAACAAAAATGGA 1870
                E  L  E  L  S  K  E  M  V  S  L  L  P  T  K  M  E 

           1901 ----+----*----+----*----+----*----+----*----+----* 1950
                 R  F  R  A  K  M  A  L  T  *                     
mbj00660   1889 GAGGTTCAGAGCCAAGATGGCCCTGACCTAAGCCTTG..GTCAAAGGAAA 1936
                ||| |||||| |||||||||||||||| ||| |||||   | |||| || 
hh00842s1  1871 GAGATTCAGAACCAAGATGGCCCTGACTTAATCCTTGTTTTTAAAGAAAG 1920
                 R  F  R  T  K  M  A  L  T  *                     

           1951 ----+----*----+----*----+----*----+----*----+----* 2000
mbj00660   1937 GAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCA 1986
                || | |||||   |  |     ||   | |||||  |  |   |||||||
hh00842s1  1921 GAAATGTGCAATATTGAAGTGATCTTTTTCCCTA..GTCAGACAGGCCCA 1968

           2001 ----+----*----+----*----+----*----+----*----+----* 2050
mbj00660   1987 GCCCCACAGTCACCTTCGCC...AGGGCCAGAGGGATGCACTCTGGGCTC 2033
                   |||  || |  ||  ||   |  |||||  |  |||| | ||  || 
hh00842s1  1969 ATTCCATTGTGATGTTTACCTTTATAGCCAGGTGAGTGCAGTTTGAACTT 2018

           2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbj00660   2034 CAGAAGCAGGCAGGTACCCGAGTCTATGCTAGGACCTTAAGCACCATA.. 2081
                 |||  ||| |    | | |||| | |||||||| | |||| | ||||  
hh00842s1  2019 GAGATACAGTC....AACTGAGTGTTTGCTAGGATCCTAAGGAACATAAA 2064

           2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbj00660   2082 ...AATTAATAATTTATACCTAATTATGTAAGTTGCCTTGCTAAAGTGAC 2128
                   |||||| || ||| |||||||||||||| |||||||| ||||  |||
hh00842s1  2065 GTTAATTAAAAACTTACACCTAATTATGTAAATTGCCTTGTTAAA..GAC 2112

           2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbj00660   2129 AGGTGTTTTGCATTTTCGATCGCTTGTTTTCCTGTTTAAGTATAAACATC 2178
                | ||| |||| ||||| ||| ||||| |||||| || || || | |||| 
hh00842s1  2113 ATGTGATTTGTATTTTAGAT.GCTTG.TTTCCTATTAAAATACAGACATT 2160

           2201 ----+----*----+----*----+----*----+----*----+----* 2250
mbj00660   2179 TCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCTGAC.AGTACTTGTTAG 2227
                ||   |||    ||||||||||  | |  ||| || | |||||||| |||
hh00842s1  2161 TCTACCCTCAGTTTCTAAATGTAGACTATTTGTTGGCTAGTACTTGATAG 2210

           2251 ----+----*----+----*----+----*----+----*----+----* 2300
mbj00660   2228 ATTTCATACTAGGAACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGT 2277
                ||| | |   || || ||  ||||||| ||||||||||| |  |||||||
hh00842s1  2211 ATTCCTTGTAAGAAAAAATGCTGGGTAATGTACCTGGTA.ACAAGCCTGT 2259

           2301 ----+----*----+----*----+----*----+----*----+----* 2350
mbj00660   2278 TGCTGTGTTGAATGTGAGAAAGTCACTTCAGATGTCATTCTTTGTAAAAT 2327
                |  | | || |   ||| ||||| |||||    || | || || ||||||
hh00842s1  2260 TAATATATTAAGATTGAAAAAGTAACTTCTATAGTTACTCCTTCTAAAAT 2309

           2351 ----+----*----+----*----+----*----+----*----+----* 2400
mbj00660   2328 ACTTACTTTCTTAAACTCC.....AAATAAATCTTTCCCTTTTGAAAAT. 2371
                | ||   ||| || | |||         ||||||||||||||||||||| 
hh00842s1  2310 ATTTGACTTCCTACATTCCCCCCACCCAAAATCTTTCCCTTTTGAAAATA 2359

           2401 ----+----*----+----*----+----*----+----*----+----* 2450
mbj00660   2372 .................................................. 2372
                                                                  
hh00842s1  2360 CTAAAAACTAAGTTATGTTATTATAAAGTGTAAAATGGTTTGTCTTAATT 2409

           2451 ----+----*----+----*----+----*----+----*----+----* 2500
mbj00660   2372 .................................................. 2372
                                                                  
hh00842s1  2410 ATAGGAGAAAAAGGCCTTGTTAGAAATAAAATAAACTGACTTATTTCACT 2459

           2501 ---- 2504
mbj00660   2372 .... 2372
                    
hh00842s1  2460 AATG 2463