FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0631.ptfa, 724 aa vs ./tmplib.26680 library 1768293 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.8759+/-0.00427; mu= 21.3589+/- 0.287 mean_var=82.2612+/-18.765, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1414 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0837 ( 376 res) mbg02434 ( 376) 354 82 1.2e-16 mKIAA1846 ( 683 res) mfk00190 ( 683) 156 42 0.00023 >>mKIAA0837 ( 376 res) mbg02434 (376 aa) initn: 311 init1: 239 opt: 354 Z-score: 391.4 bits: 82.1 E(): 1.2e-16 Smith-Waterman score: 402; 27.676% identity (30.460% ungapped) in 383 aa overlap (345-719:17-372) 320 330 340 350 360 370 mKIAA0 AEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALKGTLVNTLREVEPTSHMG :..: : . : : . .. ..:: mKIAA0 AIPPSYLLPQSVVYCHGGRVGFFQGDIR--LLSDDMKALRPTIFPV 10 20 30 40 380 390 400 410 420 430 mKIAA0 VPRVWEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSNDLKPFTSRLADYLVLA :::. ......: . : : ..: .: .: . ... :. .. .. . : : . mKIAA0 VPRLLNRMYDKIFHQADTS--LKRWLLEFAAK---RKQAEVRSGIIR--NNSIWDELFFN 50 60 70 80 90 440 450 460 470 480 490 mKIAA0 RVRQALGFAKCQKNFYGAAPMTAETQRFF-LGLNIRLYAGYGLSESTGPHFMSSPYNYRL ... .:: .. . :::: . . :. .:. ..: ::: .: :. ...: .. mKIAA0 KIQASLG-GHVRMIVTGAAPASPTVLGFLRAALGCQVYEGYGQTECTAGCTFTTPGDWTS 100 110 120 130 140 150 500 510 520 530 540 mKIAA0 YSSGRVVPGCRVKLVNQDA------DGIGEICLWGRTIFMGYLNMEDKTCEAIDSEGWLH : .: ..:::. . : ::::. : ..: :::. ::.: ::.::.:::: mKIAA0 GHVGAPLPCNHIKLVDAEELNYWTCKGEGEICVKGPNVFKGYLKDEDRTKEALDSDGWLH 160 170 180 190 200 210 550 560 570 580 590 600 mKIAA0 TGDMGRLDADGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISSAMLIGDQRKFL :::.:. .: : : : :... : :: : : ::. :. .. .. ::. : mKIAA0 TGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPV-AQIYVHGDS---L 220 230 240 250 260 270 610 620 630 640 650 660 mKIAA0 SMLLTLKCTLDPETSEPTDSLTEQAVEFCQRVGSKASTVSEIVGQRDEAVYQAIHEGIQR . .:. . :::. :. . :. : .. : .:. ... . .:: . . mKIAA0 KAFLVGIVVPDPEVM-PS---------WAQKKGIEG-TYQELCMKKE--LKKAILDDMVM 280 290 300 310 670 680 690 700 710 720 mKIAA0 VNANAAARPYHIQKWAILQRD-FSISGGELGPTMKLKRLTVLEKYKDIIDSFYQEQKQ .. ... . .. : .. : ::...: : ::.: :: . : .: :. .: mKIAA0 LGKESGLHSFEQVKAIYIHCDMFSVQNGLLTPTLKAKRPELREYFKKQIEELYLVSV 320 330 340 350 360 370 >>mKIAA1846 ( 683 res) mfk00190 (683 aa) initn: 135 init1: 87 opt: 156 Z-score: 170.6 bits: 42.1 E(): 0.00023 Smith-Waterman score: 190; 21.616% identity (25.598% ungapped) in 495 aa overlap (132-601:134-576) 110 120 130 140 150 160 mKIAA0 PYTVHQMFYEALDKYGNLSALGFKRKDKWERISYYQYYLIARKVAKGFLKLGLERAHSVA ::.: . . ..:. . . :..:. :: mKIAA1 VSVNCLDQHVQKSPETIALIWERDEPGTEVRITYRELLETTCRLANTLKRHGVHRGDRVA 110 120 130 140 150 160 170 180 190 200 210 mKIAA0 ILGFNSPEWFFSAVGTVFAGGIVTGIYTTSSPEACQYISHDCRANVIVVDTQK------- : :: . .. . :.: : ... : :. .: . ..... .: mKIAA1 IYMPVSPLAVAAMLACARIGAIHTVVFAGFSAESLAGRINDAKCKAVITFNQGLRGGRVV 170 180 190 200 210 220 220 230 240 250 260 270 mKIAA0 QLEKIL-KIWKDLPHLKAVVIYQEPPPKKMANVYTMEELIELGQEVPEEALDAIIDTQQP .:.::. . :. : .. :.. .. : . . ... : : ::. .:: .... mKIAA1 ELKKIVDEAVKSCPTVQHVLVAHRTDTK--VPMGSLD--IPLEQEMAKEAPVCTPESMSS 230 240 250 260 270 280 290 300 310 320 330 mKIAA0 NQCCVLVYTSGTTGNPKGVMLSQDNITWIARYGSQAGDIQPAEVQQEVVVSYLPLSHIAA .. ..::::.::.:::.. .::: . : . ...: .: : . mKIAA1 EDMLFMLYTSGSTGTPKGLV------------HTQAGYLLYAAMTHKLVFDYQP-----G 280 290 300 310 320 340 350 360 370 380 390 mKIAA0 QIYDLWTGIQWGAQVCFADPDALKGTLVNTLREVEPTSHMGVPRVWEKIME-RIQEVAAQ ... . : : . .. : . ...: : :. . . : :: ... .:.. . mKIAA1 DVFGCVADIGWITGHSYVVYGPLCNGATTVLFESTPV-YPDAGRYWETVQRLKINQFYGA 330 340 350 360 370 380 400 410 420 430 440 mKIAA0 SGFIRRKMLL-----WAMSVTLEQNLTCPSNDLKPFTSRLADYL--VLARVRQALGFAKC .: .:: :. . ...: .. .:.. . ..: :.. : .: . mKIAA1 PTAVR--LLLKYGDAWVKKYD-RSSLRTLGSVGEPINHEAWEWLHKVVGDGRCTLVDTWW 390 400 410 420 430 450 460 470 480 490 500 mKIAA0 QKNFYGA--APMTAETQRFFL-GLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSGRVVPG : . : :: .: .: :. .: . .:. : .:. .: :. : mKIAA1 QTETGGICIAPRPSEDGAEILPGMAMRPF--FGIV----PVLMDE--------KGNVLEG 440 450 460 470 480 510 520 530 540 550 mKIAA0 CRVKLVNQDADGIGEICL---W---GRTIFMGYLNMEDKTCEAIDSEGWLHTGDMGRLDA .: : .:. : .:::. . . : .: :. ::: .. mKIAA1 ---------GDVSGALCISQAWPGMARTIYGDHQRFVDAYFRAYP--GYYFTGDGAHRTE 490 500 510 520 530 560 570 580 590 600 610 mKIAA0 DGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISSAMLIGDQRKFLSMLLTLKCT :. ::::. . .:. .:. . . ::.:. . : . . .:: mKIAA1 GGYYQITGRMDD-VINISGHRLGTAEIEDAMA-DHPAVPETAVIGYPHDIKGEAAFAFIV 540 550 560 570 580 590 620 630 640 650 660 670 mKIAA0 LDPETSEPTDSLTEQAVEFCQRVGSKASTVSEIVGQRDEAVYQAIHEGIQRVNANAAARP mKIAA1 LKDNISDENMVVNELKLSVATKIAKYAVPDQILVVKRLPKTRSGKVMRRLLRKIITSRGQ 600 610 620 630 640 650 724 residues in 1 query sequences 1768293 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:24:52 2006 done: Mon Mar 27 10:24:53 2006 Scan time: 0.880 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]