Comparison of KIAA cDNA sequences between mouse and human (KIAA0078)

<< Original sequence data >>

mouse  mKIAA0078 (mbj00238)     length:   2732 bp
human   KIAA0078  (ha01237)     length:   3647 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :     1267      1111      156      12.31
  Total:     1267      1111      156      12.31

  3'UTR:     1472      1152      320      21.74

amino acid

  CDS1 :      423       410       13       3.07
  Total:      423       410       13       3.07
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse     1 -  1281      1 -  1281      1 -   427
         human   812 -  2080    173 -  2080    214 -   636
  3'UTR: mouse  1282 -  2732
         human  2081 -  3647
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 E  Y  E  D  Q  Y  K  D  D  N  F  G  E  G  N  D  G  17
mbj00238     1 GAGTACGAAGACCAGTACAAAGATGACAATTTTGGAGAAGGAAATGATGG 50
               || || ||||| || || || ||||| |||||||||||||||||||||||
ha01237    812 GAATATGAAGATCAATATAAGGATGATAATTTTGGAGAAGGAAATGATGG 861
           214 E  Y  E  D  Q  Y  K  D  D  N  F  G  E  G  N  D  G  230

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  G  I  L  D  D  K  L  I  S  N  N  D  G  G  I  F  D 34
mbj00238    51 CGGTATATTAGATGACAAACTTATAAGTAATAATGATGGTGGCATCTTTG 100
                || |||||||||||||||||||| |||||||||||||| || |||||||
ha01237    862 TGGAATATTAGATGACAAACTTATTAGTAATAATGATGGCGGTATCTTTG 911
           231  G  I  L  D  D  K  L  I  S  N  N  D  G  G  I  F  D 247

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   D  P  P  A  L  S  E  A  G  V  M  L  P  E  Q  P   50
mbj00238   101 ACGATCCCCCTGCCTTGTCTGAGGCAGGGGTCATGTTGCCAGAGCAACCT 150
               | |||||||||||| | |||||||||||||| |||||||||||||| |||
ha01237    912 ATGATCCCCCTGCCCTCTCTGAGGCAGGGGTGATGTTGCCAGAGCAGCCT 961
           248   D  P  P  A  L  S  E  A  G  V  M  L  P  E  Q  P   263

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 A  H  D  D  M  D  E  D  D  N  G  S  L  G  G  P  D  67
mbj00238   151 GCACATGATGACATGGATGAAGATGACAATGGCTCACTGGGTGGGCCGGA 200
               |||||||| || |||||||| ||||| ||||  ||| |||||||||| ||
ha01237    962 GCACATGACGATATGGATGAGGATGATAATGTATCAATGGGTGGGCCTGA 1011
           264 A  H  D  D  M  D  E  D  D  N  V  S  M  G  G  P  D  280

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  S  P  D  S  V  D  P  V  E  P  M  P  T  M  T  D  Q 84
mbj00238   201 TAGTCCCGACTCTGTGGATCCTGTCGAACCGATGCCAACTATGACTGATC 250
               |||||| || || |||||||| || ||||| |||||||| ||||||||||
ha01237   1012 TAGTCCTGATTCAGTGGATCCCGTTGAACCAATGCCAACCATGACTGATC 1061
           281  S  P  D  S  V  D  P  V  E  P  M  P  T  M  T  D  Q 297

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   T  T  L  V  P  N  E  E  E  A  F  A  L  E  P  I   100
mbj00238   251 AGACAACTCTCGTCCCAAACGAGGAAGAAGCTTTTGCGTTGGAGCCCATT 300
               | ||||| || || ||||| ||||||||||| ||||| |||||||| |||
ha01237   1062 AAACAACACTTGTTCCAAATGAGGAAGAAGCATTTGCATTGGAGCCTATT 1111
           298   T  T  L  V  P  N  E  E  E  A  F  A  L  E  P  I   313

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 D  I  T  V  K  E  T  K  A  K  R  K  R  K  L  I  V  117
mbj00238   301 GATATAACTGTCAAAGAGACAAAAGCCAAGAGGAAGAGGAAGCTGATTGT 350
               ||||||||||| ||||| |||||||||||||||||||||||||| |||||
ha01237   1112 GATATAACTGTTAAAGAAACAAAAGCCAAGAGGAAGAGGAAGCTAATTGT 1161
           314 D  I  T  V  K  E  T  K  A  K  R  K  R  K  L  I  V  330

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  D  S  V  K  E  L  D  S  K  T  I  R  A  Q  L  S  D 134
mbj00238   351 TGACAGTGTCAAAGAATTGGATAGTAAGACCATTAGAGCCCAGCTTAGCG 400
               ||||||||||||||| |||||||| ||||| ||||||||||| ||||| |
ha01237   1162 TGACAGTGTCAAAGAGTTGGATAGCAAGACAATTAGAGCCCAACTTAGTG 1211
           331  D  S  V  K  E  L  D  S  K  T  I  R  A  Q  L  S  D 347

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   Y  S  D  I  V  T  T  L  D  L  A  P  P  T  K  K   150
mbj00238   401 ATTATTCTGATATTGTTACGACTCTGGACCTGGCTCCGCCAACCAAGAAG 450
               ||||||| ||||||||||| ||| |||| ||||| ||||| |||||||| 
ha01237   1212 ATTATTCAGATATTGTTACTACTTTGGATCTGGCACCGCCCACCAAGAAA 1261
           348   Y  S  D  I  V  T  T  L  D  L  A  P  P  T  K  K   363

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 L  M  M  W  K  E  T  G  G  V  E  K  L  F  S  L  P  167
mbj00238   451 CTTATGATGTGGAAAGAGACAGGAGGAGTGGAAAAGCTCTTCTCCTTACC 500
                | |||||||||||||||||||||||||| ||||| || || || |||||
ha01237   1262 TTGATGATGTGGAAAGAGACAGGAGGAGTAGAAAAACTGTTTTCTTTACC 1311
           364 L  M  M  W  K  E  T  G  G  V  E  K  L  F  S  L  P  380

           501 ----+----*----+----*----+----*----+----*----+----* 550
           168  A  Q  P  L  W  N  N  R  L  L  K  L  F  T  R  C  L 184
mbj00238   501 AGCACAGCCCCTGTGGAATAACCGGCTACTGAAGCTCTTCACACGCTGCC 550
                || |||||  ||||||||||| | |||||||||||||| |||||||| |
ha01237   1312 TGCTCAGCCTTTGTGGAATAACAGACTACTGAAGCTCTTTACACGCTGTC 1361
           381  A  Q  P  L  W  N  N  R  L  L  K  L  F  T  R  C  L 397

           551 ----+----*----+----*----+----*----+----*----+----* 600
           185   T  P  L  V  P  E  D  L  R  K  R  R  K  G  G  E   200
mbj00238   551 TTACCCCACTTGTACCAGAAGACCTTAGGAAGAGAAGGAAAGGGGGAGAG 600
               |||| || |||||||||||||||||||| || || |||||||| ||||||
ha01237   1362 TTACACCGCTTGTACCAGAAGACCTTAGAAAAAGGAGGAAAGGAGGAGAG 1411
           398   T  P  L  V  P  E  D  L  R  K  R  R  K  G  G  E   413

           601 ----+----*----+----*----+----*----+----*----+----* 650
           201 A  D  N  L  D  E  F  L  K  E  F  E  N  P  E  V  P  217
mbj00238   601 GCAGATAATCTGGATGAGTTCCTCAAAGAGTTTGAGAATCCAGAGGTTCC 650
               ||||||||| ||||||| ||||||||||| ||||| ||||||||||||||
ha01237   1412 GCAGATAATTTGGATGAATTCCTCAAAGAATTTGAAAATCCAGAGGTTCC 1461
           414 A  D  N  L  D  E  F  L  K  E  F  E  N  P  E  V  P  430

           651 ----+----*----+----*----+----*----+----*----+----* 700
           218  R  E  E  Q  Q  P  Q  Q  Q  Q  P  Q  P  Q  R  D  V 234
mbj00238   651 CAGAGAGGAGCAGCAGCCACAGCAGCAGCAGCCACAGCCGCAGCGAGATG 700
                |||||||| ||||| |  ||||| ||||||            || ||||
ha01237   1462 TAGAGAGGACCAGCAACAGCAGCATCAGCAG............CGTGATG 1499
           431  R  E  D  Q  Q  Q  Q  H  Q  Q  .  .  .  .  R  D  V 443

           701 ----+----*----+----*----+----*----+----*----+----* 750
           235   I  D  E  P  I  I  E  E  P  S  R  L  Q  D  S  V   250
mbj00238   701 TCATCGATGAGCCCATTATAGAAGAGCCAAGCCGCCTCCAGGACTCAGTG 750
               | ||||||||||||||||| ||||||||||||||||||||||| ||||||
ha01237   1500 TTATCGATGAGCCCATTATTGAAGAGCCAAGCCGCCTCCAGGAGTCAGTG 1549
           444   I  D  E  P  I  I  E  E  P  S  R  L  Q  E  S  V   459

           751 ----+----*----+----*----+----*----+----*----+----* 800
           251 M  E  A  S  R  T  T  I  E  E  S  A  M  P  P  P  P  267
mbj00238   751 ATGGAGGCCAGCAGAACAACCATAGAAGAATCAGCCATGCCCCCACCACC 800
               ||||||||||||||||||| |||||| || ||||| ||||| ||||||||
ha01237   1550 ATGGAGGCCAGCAGAACAAACATAGATGAGTCAGCTATGCCTCCACCACC 1599
           460 M  E  A  S  R  T  N  I  D  E  S  A  M  P  P  P  P  476

           801 ----+----*----+----*----+----*----+----*----+----* 850
           268  P  Q  G  V  K  R  K  A  G  Q  I  D  P  E  P  S  I 284
mbj00238   801 CCCTCAAGGAGTTAAGCGGAAAGCCGGGCAAATAGACCCAGAGCCTTCGA 850
                ||||| ||||||||||| ||||| || ||||| ||||||||||||  ||
ha01237   1600 ACCTCAGGGAGTTAAGCGAAAAGCTGGACAAATTGACCCAGAGCCTGTGA 1649
           477  P  Q  G  V  K  R  K  A  G  Q  I  D  P  E  P  V  M 493

           851 ----+----*----+----*----+----*----+----*----+----* 900
           285   P  P  Q  Q  V  E  Q  M  E  I  P  P  V  E  L  P   300
mbj00238   851 TACCTCCTCAGCAGGTAGAGCAAATGGAAATACCACCAGTAGAACTTCCC 900
               | |||||||||||||||||||| |||||||||||||| ||||| ||||||
ha01237   1650 TGCCTCCTCAGCAGGTAGAGCAGATGGAAATACCACCTGTAGAGCTTCCC 1699
           494   P  P  Q  Q  V  E  Q  M  E  I  P  P  V  E  L  P   509

           901 ----+----*----+----*----+----*----+----*----+----* 950
           301 P  E  E  P  P  N  I  C  Q  L  I  P  E  L  E  L  L  317
mbj00238   901 CCAGAGGAGCCTCCAAATATCTGTCAGCTGATCCCGGAGTTAGAGCTCCT 950
               ||||| || |||||||||||||||||||| || || |||||||| || ||
ha01237   1700 CCAGAAGAACCTCCAAATATCTGTCAGCTAATACCAGAGTTAGAACTTCT 1749
           510 P  E  E  P  P  N  I  C  Q  L  I  P  E  L  E  L  L  526

           951 ----+----*----+----*----+----*----+----*----+----* 1000
           318  P  E  K  E  K  E  K  E  K  E  K  E  E  E  E  E  E 334
mbj00238   951 ACCGGAGAAGGAGAAGGAAAAAGAGAAGGAGAAGGAAGAGGAGGAGGAGG 1000
                || || || |||||||| ||||||||||| || ||||| || || ||||
ha01237   1750 GCCAGAAAAAGAGAAGGAGAAAGAGAAGGAAAAAGAAGATGATGAAGAGG 1799
           527  P  E  K  E  K  E  K  E  K  E  K  E  D  D  E  E  E 543

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
           335   E  D  E  D  A  S  G  G  D  Q  D  Q  E  E  R  R   350
mbj00238  1001 AGGAGGATGAAGATGCTTCAGGGGGTGATCAGGATCAAGAGGAAAGGAGA 1050
               | |||||||||||||| |||||||| ||||| ||||| || ||||| |||
ha01237   1800 AAGAGGATGAAGATGCATCAGGGGGCGATCAAGATCAGGAAGAAAGAAGA 1849
           544   E  D  E  D  A  S  G  G  D  Q  D  Q  E  E  R  R   559

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
           351 W  N  K  R  T  Q  Q  M  L  H  G  L  Q  R  A  L  A  367
mbj00238  1051 TGGAACAAACGCACTCAGCAGATGCTTCATGGTCTTCAGCGAGCTCTTGC 1100
               ||||||||| | ||||||||||||||||||||||||||||| ||||||||
ha01237   1850 TGGAACAAAAGGACTCAGCAGATGCTTCATGGTCTTCAGCGTGCTCTTGC 1899
           560 W  N  K  R  T  Q  Q  M  L  H  G  L  Q  R  A  L  A  576

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
           368  K  T  G  A  E  S  I  S  L  L  E  L  C  R  N  T  N 384
mbj00238  1101 TAAAACTGGAGCAGAGTCTATCAGTTTGCTTGAGCTGTGTCGAAACACAA 1150
               |||||||||||| || |||||||||||||||||| | |||||||| || |
ha01237   1900 TAAAACTGGAGCTGAATCTATCAGTTTGCTTGAGTTATGTCGAAATACGA 1949
           577  K  T  G  A  E  S  I  S  L  L  E  L  C  R  N  T  N 593

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
           385   R  K  Q  A  A  A  K  F  Y  S  F  L  V  L  K  K   400
mbj00238  1151 ACCGAAAGCAGGCAGCAGCAAAGTTCTACAGCTTTTTGGTTCTTAAGAAG 1200
               || |||| || || || ||||||||||||||||| ||||||||||| |||
ha01237   1950 ACAGAAAACAAGCTGCCGCAAAGTTCTACAGCTTCTTGGTTCTTAAAAAG 1999
           594   R  K  Q  A  A  A  K  F  Y  S  F  L  V  L  K  K   609

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
           401 Q  Q  A  I  E  L  T  Q  E  E  P  Y  S  D  I  I  A  417
mbj00238  1201 CAGCAAGCCATCGAGCTCACACAGGAAGAGCCGTACAGTGACATCATTGC 1250
               |||||||| || ||||| ||||||||||| ||||||||||||||||| ||
ha01237   2000 CAGCAAGCTATTGAGCTGACACAGGAAGAACCGTACAGTGACATCATCGC 2049
           610 Q  Q  A  I  E  L  T  Q  E  E  P  Y  S  D  I  I  A  626

          1251 ----+----*----+----*----+----*- 1281
           418  T  P  G  P  R  F  H  I  I  *   427
mbj00238  1251 AACCCCTGGACCACGGTTCCATATTATCTGA 1281
               ||| ||||||||| ||||||||||||| | |
ha01237   2050 AACACCTGGACCAAGGTTCCATATTATATAA 2080
           627  T  P  G  P  R  F  H  I  I  *   636


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
mbj00238  1282 GGAGCTAGATGTGTTCGAGCTAGTG.ATAACTCACTAGTACATACAAATT 1330
               ||||||||| |  ||  ||||||||  | | |||||||| | ||||||||
ha01237   2081 GGAGCTAGAAGCATTATAGCTAGTGTTTGATTCACTAGTGCTTACAAATT 2130

            51 ----+----*----+----*----+----*----+----*----+----* 100
mbj00238  1331 GCCCCCGTGTGCAGGGCAC.CAAAACCCTTTAAGAAAGTTTTTAGATTTC 1379
               |||||| |||| |||| || || |||||||| |||||    |||||||| 
ha01237   2131 GCCCCCATGTGTAGGGGACACAGAACCCTTTGAGAAA..ACTTAGATTTT 2178

           101 ----+----*----+----*----+----*----+----*----+----* 150
mbj00238  1380 TGTTTGTACAAAAATCTTTGCCTTTTCTTTCTTCTTTTTCCCCCCAGTGT 1429
               ||| ||||||||    ||  | ||||| |||||| ||||   ||      
ha01237   2179 TGTCTGTACAAAGTCTTTGCCTTTTTCCTTCTTCATTTTTTTCCAGTACA 2228

           151 ----+----*----+----*----+----*----+----*----+----* 200
mbj00238  1430 TTCTAATTTTGTCAACCATATTTTTAAGGGAAACTGCTTATTTGGGTTGG 1479
               |  ||| ||||||||    || ||| |||||||||| |||  ||||||| 
ha01237   2229 T..TAAATTTGTCAATTTCATCTTTGAGGGAAACTGATTAGATGGGTTGT 2276

           201 ----+----*----+----*----+----*----+----*----+----* 250
mbj00238  1480 GTTTGTATTC..CTGGAGAAAACAGTAGCCCAAGAACCCAGAAGA..CTT 1525
               |||||| |||   |||||||||||| | |||||| || |||||||   ||
ha01237   2277 GTTTGTGTTCTGATGGAGAAAACAGCACCCCAAGGACTCAGAAGATGATT 2326

           251 ----+----*----+----*----+----*----+----*----+----* 300
mbj00238  1526 TTAACAGTTCAGAACAGATGTGTGCAATATTGGTGCATGTAAGAATATGG 1575
               |||||||||||||||||||||||||||||||||||||||||| ||| | |
ha01237   2327 TTAACAGTTCAGAACAGATGTGTGCAATATTGGTGCATGTAATAATGTTG 2376

           301 ----+----*----+----*----+----*----+----*----+----* 350
mbj00238  1576 AGTAACAGTCAAAAGGCACCATTTTTAATGTTAGTTTTCCATTACTATGT 1625
               |||  |||||||||| ||  |||||| || |||||| | |||||||   |
ha01237   2377 AGTGGCAGTCAAAAGTCATGATTTTT.ATCTTAGTTCTTCATTACTGCAT 2425

           351 ----+----*----+----*----+----*----+----*----+----* 400
mbj00238  1626 TG.AAAGGAAAACCTGCCTAGGAAAATGCCTGACACTTTA....AGAACT 1670
               || ||||||||||||| ||  |||||||||||||| ||||    | ||||
ha01237   2426 TGAAAAGGAAAACCTGTCTGAGAAAATGCCTGACAGTTTAATTTAAAACT 2475

           401 ----+----*----+----*----+----*----+----*----+----* 450
mbj00238  1671 GTGGTTTGAGTCCCTTGACAGGAAGAGAAAA.........ATGTCTTCCC 1711
                |||| | ||| | |||||| ||| | ||||         |  |||| ||
ha01237   2476 ATGGTGTAAGT.CTTTGACAAGAAAAAAAAACAAACAAACACTTCTTTCC 2524

           451 ----+----*----+----*----+----*----+----*----+----* 500
mbj00238  1712 ATCAGTGAAAC...CAACGGTCTGGTTAACCACTGT.AGTAGGGATAGTG 1757
               |||||| | ||   |||   ||  |||||||||| |   ||||||| || 
ha01237   2525 ATCAGTAACACTGGCAATCTTCCTGTTAACCACTCTCCTTAGGGATGGTA 2574

           501 ----+----*----+----*----+----*----+----*----+----* 550
mbj00238  1758 TGTGAAGCATC.GTGCTTGTCTTCTTGA...TCATGTTTAAAGTAAATCC 1803
               | |||| || |  || |   | ||||||   || | || |  |||| |||
ha01237   2575 TCTGAAACAACAATGGTCACCCTCTTGAGATTCGTTTTAAGTGTAATTCC 2624

           551 ----+----*----+----*----+----*----+----*----+----* 600
mbj00238  1804 ACACTGAGCA....AGAATTTGTGAGGTTGTGCTGACTGATCTTCTTCGG 1849
               | | ||||||     | |   |  |   |||  ||||||||   |||| |
ha01237   2625 ATAATGAGCAGAGGTGTACGCGAAATTGTGTTATGACTGATAGCCTTCAG 2674

           601 ----+----*----+----*----+----*----+----*----+----* 650
mbj00238  1850 CTA...............................TTATGTTCTG.AAATC 1867
               |||                               || | || || |||||
ha01237   2675 CTACAAAAAGATAGGACTGACCTGGTTTAAAGTGTTCTATTTTGTAAATC 2724

           651 ----+----*----+----*----+----*----+----*----+----* 700
mbj00238  1868 ATTCC......GTGAGTCTTAGGACCTCTGAT.................. 1893
               |||||      ||   ||| | || ||  | |                  
ha01237   2725 ATTCCATTTGAGTCTTTCTGATGAACTTGGCTATACTGAAATCTGTTATT 2774

           701 ----+----*----+----*----+----*----+----*----+----* 750
mbj00238  1894 ...GCTATGCACCGCAGCTCAGAACGATCAGAC.GTCTACAGTGGCGTGA 1939
                  |  | || ||  |      || | |  | | |  || ||| | ||||
ha01237   2775 TTAGTGAGGCTCCAAAATGAGCAAAGCTAGGCCTGATTAGAGTAGAGTGA 2824

           751 ----+----*----+----*----+----*----+----*----+----* 800
mbj00238  1940 CTCCT................CAGGGGCTGCAGATCA....CTCTCAGAG 1969
               ||  |                 ||| |||  | ||||     |   | ||
ha01237   2825 CTATTAAAAAACATAACTTTCTAGGAGCTATAAATCAAAGTTTTAAAAAG 2874

           801 ----+----*----+----*----+----*----+----*----+----* 850
mbj00238  1970 GTGTTTGGATGTTTGCTTGAATAATGAGATCATGGAAGCAGACATTCCCC 2019
                ||||||||| | |  |||| || |  ||||||| || |||| ||| |||
ha01237   2875 ATGTTTGGATATAT..TTGAGTATTCCGATCATGAAAACAGAAATTGCCC 2922

           851 ----+----*----+----*----+----*----+----*----+----* 900
mbj00238  2020 TGCCTGCT.GAAGGGCAGACCAATGAGAGACTA..CCCCAGATTGACTT. 2065
               ||||| ||  |||| |||||  ||| || | ||  | || | |  |||| 
ha01237   2923 TGCCTACTACAAGGACAGACTGATGGGAAATTATGCACCTGGTCAACTTA 2972

           901 ----+----*----+----*----+----*----+----*----+----* 950
mbj00238  2066 .CCTTTAAGCAAACAGTGCTGTAAAAACTAATGGCTTCTCTGATATTTAT 2114
                | |||||||| ||  ||||||||||||||| ||||||||||||||||||
ha01237   2973 GCTTTTAAGCAGACGATGCTGTAAAAACTAACGGCTTCTCTGATATTTAT 3022

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mbj00238  2115 TATAAATGTTAGTACTCATCT..TTTTCCAAGGCTGCACACTCCTGTATT 2162
               | ||| | |||||||| ||||  |||||||  ||||||||||||||  ||
ha01237   3023 TGTAAGTTTTAGTACTGATCTCCTTTTCCAGTGCTGCACACTCCTGGTTT 3072

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mbj00238  2163 TGCAACTTATTTTTAATAACTTTGCAACTATAATCCTGTAT.CAGTTTCC 2211
                |      |  ||||||| | ||||||| | |||||| ||| ||||||||
ha01237   3073 GG......AACTTTAATAGCGTTGCAACGA.AATCCTATATCCAGTTTCC 3115

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mbj00238  2212 TATAATTTAAGTGGAGAAAA..ACATCCTAATAAAGGCTTTATTATTAAC 2259
               | |||||||| || ||||||  |||||| ||||||| |||||||||||||
ha01237   3116 TGTAATTTAATTGAAGAAAAATACATCCAAATAAAGACTTTATTATTAAC 3165

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mbj00238  2260 AGACCAGATAGCACCAGAAATTATGTGACT.ATATAAATATCAAAACATG 2308
               ||||||||||||| ||||||| ||||||||  ||| | ||||| || |||
ha01237   3166 AGACCAGATAGCATCAGAAATCATGTGACTGTTATGATTATCAGAATATG 3215

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mbj00238  2309 ..TTCACTTTGTAGGACAAAATTATGTTGAAAAGTTCTAGCTTAAGTGTT 2356
                 || ||||| |||| |||| |||      ||||||||||||||||||||
ha01237   3216 TCTTAACTTTTTAGGGCAAAGTTAACACTGAAAGTTCTAGCTTAAGTGTT 3265

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbj00238  2357 GGCACTTTTATGGG..GGGGAAATCAGTTTTAAAACTAAGACTTCCATGT 2404
               |  |||||| ||||      |||||| |||| ||||| |||||||  |||
ha01237   3266 GAAACTTTTGTGGGAAAAAAAAATCACTTTTGAAACTCAGACTTCAGTGT 3315

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mbj00238  2405 ATACCCAGTAATTTAAAATTATGTGAAATATTTTAAATTTGTGAACTCGT 2454
               ||||||| ||||||||||||||||||||| ||||||||||||||||||||
ha01237   3316 ATACCCAATAATTTAAAATTATGTGAAATGTTTTAAATTTGTGAACTCGT 3365

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mbj00238  2455 AATTACTACTTTAATGATTCAGTTTCTCGAGAATGGTAATTGTATAAAAT 2504
               |||||||  ||||||||||||||||||  ||| |||||||||||||||||
ha01237   3366 AATTACTGTTTTAATGATTCAGTTTCTTCAGAGTGGTAATTGTATAAAAT 3415

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mbj00238  2505 TGCTCTTGCAGTTTTCTTTTCAATACGACGTGCCTGTAACCATGGATGT. 2553
               |||| |||||| ||| | ||||||| || |||||||||| |   |  || 
ha01237   3416 TGCTATTGCAGCTTTATATTCAATATGATGTGCCTGTAAACCAAGGAGTT 3465

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mbj00238  2554 ...CCCCTTTGTAAAAAGACACTGTAGATAATTGAATGTTTGATTATAGA 2600
                  ||| |||||||||||||| ||||||||||||||||||||||| ||||
ha01237   3466 TTCCCCGTTTGTAAAAAGACATTGTAGATAATTGAATGTTTGATTTTAGA 3515

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mbj00238  2601 AAGGTCGTTAGTTTCTTGTTAAACATTTTGTTAGTCCAGTTTTTGTCGCT 2650
               |||||| |||||||||||||| ||||||||||||||  |||||||| |||
ha01237   3516 AAGGTCATTAGTTTCTTGTTACACATTTTGTTAGTCTGGTTTTTGTTGCT 3565

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mbj00238  2651 TATTGGGTTTAATATTGTTCTTGAAAATAGTCGATGCTATGTTATGTATA 2700
               ||| ||||||||||||||||||||||||||| ||||||||||||||||||
ha01237   3566 TATCGGGTTTAATATTGTTCTTGAAAATAGTTGATGCTATGTTATGTATA 3615

          1551 ----+----*----+----*----+----*-- 1582
mbj00238  2701 ACTTTTCTAATAAAAGTTGTGTTTCAAGCTGT 2732
               |||||||||||||||||||||||  |||||||
ha01237   3616 ACTTTTCTAATAAAAGTTGTGTTATAAGCTGT 3647