Comparison of KIAA cDNA sequences between mouse and human (FLJ00387)
<<Original sequence data>>
mouse mFLJ00387 (mbj00169) length: 2318 bp, CDS: 2 - 1774
human (sj04377) length: 4441 bp, CDS: 1484 - 1834
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 31 - 1507 304 309 50.4
CDS: 1508 - 1841 99 99 50.0
3'UTR: 1842 - 4440 753 787 51.1
amino acid
CDS: 1508 - 1841 16 95 85.6
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mbj00169 1 ..............................GGTGGCAGCTGGCTCCGGTC 20
|| | |||| ||
sj04377 1 ACTTTGAATTGCTAAAAGTGGCATTTTTCCTATGTGCAGTCACTCCTCTC 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mbj00169 21 ACCGCGCCACCATGGCGGTGCGACAGGCACTG.................. 52
| | | | || ||| | ||||||| |
sj04377 51 ATTTCTAAAATAGGGACGTG.GCCAGGCACGGTGGCTCATGCCTGTAGTC 99
101 ----+----*----+----*----+----*----+----*----+----* 150
mbj00169 53 ..............GGCCGAGGCCTGCAGCT....GGGTCGGGCGCTGCT 84
||||||||| || ||| |||| || | |
sj04377 100 CCAGCACTTTGGGAGGCCGAGGCGGGCGGCTCACGAGGTCAGGAGATCGA 149
151 ----+----*----+----*----+----*----+----*----+----* 200
mbj00169 85 GCTGCGCTTCGCGCCCA................................. 101
| | | || ||
sj04377 150 GACTATCCTGGCTAGCACGGTGAAGCCCTGTCTCTACTAGAAGTACAAAA 199
201 ----+----*----+----*----+----*----+----*----+----* 250
mbj00169 102 ....AGCCCGGCCCGCTGTTCGGCTGGGGGAAGCCCGGCCCCGCGGCGGC 147
|| ||| | || | ||| | |||||| | ||| |
sj04377 200 GATTGGCTGGGCGTGGTGGTGGGCACCTGTGGTCCCGGCTACTCGGGAGG 249
251 ----+----*----+----*----+----*----+----*----+----* 300
mbj00169 148 CTGGGGCCGCGGAGAGCGCCCAGGCCGGGTCGTAAGCCCCG....GAGCA 193
||| ||| | || || | || || | | | | ||||
sj04377 250 CTGAGGCAGGAGAAAGGCATGAATCCAGGAGGCAGAGCTTGCAGTGAGCT 299
301 ----+----*----+----*----+----*----+----*----+----* 350
mbj00169 194 CAGCCTCGGCCGGTCGGGCTCCCCCTCCCGGACCGC.............. 229
|| ||| | || | || || || | |
sj04377 300 GAGATCGCGCCATT...GCACTCCAGCCTGGGCAACAGTGTTAAGACTCT 346
351 ----+----*----+----*----+----*----+----*----+----* 400
mbj00169 230 .................................................. 230
sj04377 347 GTCTCAAATATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA 396
401 ----+----*----+----*----+----*----+----*----+----* 450
mbj00169 230 ......TACCGCTTCTTCCGCCAGTCGGTAGCTGGGCTGGCGGCGCGGAT 273
| | | || || | | |||| | | | | |
sj04377 397 AATAAAGCGAGATGTTGCCCTCAAACTTCACCTGGCCCCGGTCCTGGTTT 446
451 ----+----*----+----*----+----*----+----*----+----* 500
mbj00169 274 .CCAGAGGCAGTTCATGGTGCGGGCCCGGGGCGGCG.....CAGGCCCTT 317
| | ||| || ||| | || ||| | | | ||
sj04377 447 GCTAATGGCTGTGGGTGGGGGTTGCTGTGGGTGATGACTGACTGGATACA 496
501 ----+----*----+----*----+----*----+----*----+----* 550
mbj00169 318 GCGGCCGAGCGGTCTTCCTGGCCTTCGGGCTGGGGCTGG........... 356
|| | | |||| || || | || || ||||
sj04377 497 AAATCCTAAGTGGCTTCATGAAATTTTGCCTAGGACTGGACTGTCTTTCT 546
551 ----+----*----+----*----+----*----+----*----+----* 600
mbj00169 357 .................................................. 357
sj04377 547 TTTAACTATGAAATGATGGTTCTCCCTAACGTCTCCTCAAAGGATACAAG 596
601 ----+----*----+----*----+----*----+----*----+----* 650
mbj00169 357 .................................................. 357
sj04377 597 AAAGTTGTTGTTGCTAGTAGACCGAGGGGTGGGAATCACTGAAATGGAAA 646
651 ----+----*----+----*----+----*----+----*----+----* 700
mbj00169 357 .................................................. 357
sj04377 647 ATCTAGATGACAGTGCTGGGTAAGAGAAAACTAGAACAGCTCAGTTGAAG 696
701 ----+----*----+----*----+----*----+----*----+----* 750
mbj00169 357 .................................................. 357
sj04377 697 ACAACCTTTACTGCATGTTGACGCTGATTTAGGCAATAGCTTCCTAAAAA 746
751 ----+----*----+----*----+----*----+----*----+----* 800
mbj00169 357 .................................................. 357
sj04377 747 TCATGTATAAAGTTAGTTAGTTAGACATGAAATCTCTTCCCCAATGTTGA 796
801 ----+----*----+----*----+----*----+----*----+----* 850
mbj00169 357 .................................................. 357
sj04377 797 TACCTGCCCACAAAATATTCTCACCTTCAGAGTATAAGGATCATTCTTAA 846
851 ----+----*----+----*----+----*----+----*----+----* 900
mbj00169 357 .................................................. 357
sj04377 847 AGCCAAATATTCAGTTCAAGGCACATACGTCATCTGCAGTTGTAAATTTG 896
901 ----+----*----+----*----+----*----+----*----+----* 950
mbj00169 357 .................................................. 357
sj04377 897 CATTTAATATTTCACAATTCCTGTAAGAGAGGCTAGTCAGGAGGGACACC 946
951 ----+----*----+----*----+----*----+----*----+----* 1000
mbj00169 357 .................................................. 357
sj04377 947 CTCAAGTTTAAATCCCCACACTTACTTACTTACTGCTCATCCGTCACTTT 996
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mbj00169 357 GGCTGATCGAGGAGAAGCAGGCGGAAGGCCGGAGGGCCGCCTCGGCCTGT 406
||| | ||| || | | | || | | | | || ||
sj04377 997 CGCTAAGTGAGATTAATAATTCAGTAGCTGGTCCAGAACGCACAGCTTGG 1046
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mbj00169 407 CAGGAGATCCAGGCAATTTTTACACAGAAAACCAAGCGCGTGTCTGACCC 456
| | || | | | ||| | ||| |||| |
sj04377 1047 GAACGCAGAGGCCCAGGCCTCATGTAATTTCCCACTCCCGTAACTGAACG 1096
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mbj00169 457 ACTGGACACTCGATGCTGGCAGGGCTTCCATCTGGAGGATTATCTGATAG 506
||| | | || || | | |||| | || || ||| || |
sj04377 1097 TGCTGACCCATGTTGATGTC.TGCCTTCATCCAGGTGGCAAATCAGACAT 1145
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mbj00169 507 G................................................. 507
|
sj04377 1146 GCTACGCTGCCCCCTTCAAACGAGTTCCTCGTGTTAGGGGCAAAGGTCAC 1195
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbj00169 508 .................GCAAGCCATTGGCAAGGGTTGCAATGCCGCTGT 540
| ||||| || | || || | | ||||
sj04377 1196 AGCCAAACTCTGCCACTGACAGCCAGTGCCTTGGCCTGGATCCTCTCTGT 1245
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mbj00169 541 GTATGAAGCCACCATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCA... 587
| ||| || | | | || | | | || | | | | || |||
sj04377 1246 GGATGCAGGC.CTACCCCTCCTCAGTCCAGCCTCATCTACTAGACCAGCT 1294
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mbj00169 588 .................................................. 588
sj04377 1295 TGGCCATTCACTTTTCGGATGTCTGTGAGCACAGGACTGCAGACTGAACT 1344
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mbj00169 588 ........................AACACCTTGGCCTTAT.......... 603
|| || |||||| |
sj04377 1345 CTCACTCAAGTTCTTCCATTTGCCAAGCCCGAGGCCTTTTCCGGCTAACC 1394
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mbj00169 604 .................................................. 604
sj04377 1395 AGCCCTCTCTGCGCTGTCTTGTCTCCTGACTCCCACCCTCACCATTCACA 1444
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mbj00169 604 .................................................. 604
sj04377 1445 GACCATCACGACACAGAGGATGCCAAGTTCTTTTAGTAATTCACCAGCTC 1494
F T S S
1501 ----+----*----+----*----+----*----+----*----+----* 1550
G K G P D V V - E G S R R G A
mbj00169 604 ......AGGAAAGGGCCCGGATGTCGTCC.TGAAGGGAGCAGACGGGGAG 646
||| | | || || | ||| ||| ||| || ||| |
sj04377 1495 CATGCAGGGACATCACAGGGCTGCCCTCCATGAGCAGAGGAGGAGGGCTG 1544
M Q G H H R A A L H E Q R R R A A
1551 ----+----*----+----*----+----*----+----*----+----* 1600
G S R D S H F P F A I K M M W -
mbj00169 647 CAGGCTCCAGGGACTCCCACCTTTCCCTTTGCCATCAAGATGATGTGGA. 695
| | || | || || || || |||| |||| || | |
sj04377 1545 CCTGGCAGAGCGTTTCACA.CTCCAGGTTAGCCAGAAAGAGCATCTTCAT 1593
W Q S V S H S R L A R K S I F I
1601 ----+----*----+----*----+----*----+----*----+----* 1650
I S A G S S S E A I L S K M S Q
mbj00169 696 ..ATATCTCGGCAGGTTCCTCCAGCGAAGCCATCTTAAGCAAAATGAGCC 743
| | || || || | | | | || ||| | | | |
sj04377 1594 TTTTGTTTCCACACAACACTTCTCTGTGAGCCTGTTGGCCAACAAGTGGC 1643
F V S T Q H F S V S L L A N K W R
1651 ----+----*----+----*----+----*----+----*----+----* 1700
E L - R Q A A W L W M E S
mbj00169 744 AGGAGCTGGT........CCCGGCAAGCCGCGTGGCTTTGGATGGAGAGT 785
| | | || || | ||| | | || || ||| |
sj04377 1644 GGCCGATTGTTGGAGGAGCCAGCCAACCATCTTGTCTAACTTCAGAGTCT 1693
P I V G G A S Q P S C L T S E S
1701 ----+----*----+----*----+----*----+----*----+----* 1750
M E -
mbj00169 786 ATGGAGC........................................... 792
| ||
sj04377 1694 TCAGGGCTAGAATATGTTCACCCCAGAGGCTTAGATGAAGCACATTTGCG 1743
S G L E Y V H P R G L D E A H L R
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbj00169 793 .................................................. 793
sj04377 1744 GCTACTCGGGCAGATGGTCTCTGCAACAGGAAGGGAAGCTGTAGCTAGAA 1793
L L G Q M V S A T G R E A V A R T
1801 ----+----*----+----*----+----*----+----*----+----* 1850
S Y
mbj00169 793 ...................................AGTTACTTACAGAAG 807
|||| | | |
sj04377 1794 CATCTGTTAACACAGTCTCAACCCAAAGCCTGCTTTGTTAGTGAGGGTCT 1843
S V N T V S T Q S L L C *
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mbj00169 808 ATCCAGAGATGGTCCCAAGCAGCTTGCCCCACACCCTAACATCATCCGGG 857
|| ||||||||| | || || | || | || | | |
sj04377 1844 TCCCTTCTCTGGTCCCAACCCAATTCTTCCTCTACCCTATCTCCTACTGA 1893
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mbj00169 858 T...................................TTTCCGCGCCTTCA 872
| | ||| || |
sj04377 1894 TGCCCTTCACTCAGGTGACAAATACTGCCTGTCCCCTACCCGTGCTCCAA 1943
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mbj00169 873 CCT....CATCTGTGCCCCTCCTGCCGGGGGCCCTGGCTGACTATCCTGA 918
|| ||| ||| | |||| |||| | || | | | |
sj04377 1944 GCTTTTCCATGTGTACACCTCTGCATGGGGCAGCATGC..ATTGTTGAAA 1991
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mbj00169 919 TATGCTGCCCCCACACTACTACCCAGAAGGCCTGGGCCACGGTCGTACAC 968
|| || |||| || ||| |||| | | | | || |||
sj04377 1992 TAGCCTTTCCCC......CTGGGTGGAAAGCCTAGTGC.CTCTTGTGCAC 2034
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbj00169 969 TGTTCCTCGTTATGAAGAACTACCCCTGTACCCTGCGC........CAGT 1010
| | | | |||| | ||| || | | ||
sj04377 2035 AGCTATCTGGTCCCTTGAACCAGGTAAGTAGTCTCCTCTATCATTTCATA 2084
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbj00169 1011 ACCTTGAGGAGCAGACTCCCAGTTCTCGCCTGGCTACCATGATGACCTTG 1060
|| | ||| | | || ||| |||| ||| |
sj04377 2085 ACTGGTTGCAGCTGTTATTCTAACCTTCACTGCGCACCAAGATAGCAGGC 2134
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbj00169 1061 CAGTTGCTGGAGGGCGTGGACCATCTGGTTCAGCAGGGC........... 1099
|| | | | | || || ||| | ||| ||
sj04377 2135 CACGTACAGAGAGCAGTTAACGGAGTGGCAGAACAGTGCTGGGATGCAGG 2184
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mbj00169 1100 .................................................. 1100
sj04377 2185 TATGGCTCAGCTCTTTGCACTAAGCCTGCCCCTGAGCCAGCTGCCACTCC 2234
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mbj00169 1100 .................................................. 1100
sj04377 2235 AATTATGGCTTCGGATAGGTCTGCCTTTGCATTCCTTTATATTAATTTCA 2284
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mbj00169 1100 .................................................. 1100
sj04377 2285 CAATGTCCAGATCTGCTCTCAGGAGATGTTTTCCATCTCTCTCTGATCAG 2334
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mbj00169 1100 .................................................. 1100
sj04377 2335 TTCTCAGCTGCTTCCATGAGCTACATCTCCATTAAACATTTCTCAAAAAT 2384
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mbj00169 1100 .................................................. 1100
sj04377 2385 GCCTCCTTTTCTCTCTCTGAATAGCCTTTTTTTTTTTTTTTTTTGAGACA 2434
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mbj00169 1100 ..................................ATTGCCCATCGGGATC 1115
||| || ||
sj04377 2435 GAGACTTGCACTGTCACCTAGGCCAGAGTGCAGTGGTGCGGTCTTGGCTC 2484
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mbj00169 1116 TCAAGTCCGACAACATCCTTGTGGAGTGGGACTCAGATGGCTGTCCCTGG 1165
| | | | ||| | | | || || || | |||
sj04377 2485 ACTGCAACCTCTGCCTCCGGGGTTCGGGCGATTCTCCTGCTTCAGCCTCC 2534
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mbj00169 1166 CTGGTGATCTCAGACTTTGGCTGCTGCCTGGCTGACCAGCATGTT..... 1210
| ||| | ||| |||| | | |||| ||
sj04377 2535 CGAGTGCCTGGAATTGCGGGCGTGTGCCACGACGCTCAGCTAATTTTTGT 2584
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mbj00169 1211 ...............GGCCTGCGGCTGCCTTTCAACAGCTCCAGTGTAGA 1245
|| | || | || ||| | || |
sj04377 2585 ATTTTTGGTACAGACGGGGTTTTGCCGTGTTGGCCAGGCTGGACTGGAAC 2634
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mbj00169 1246 GCGTGGTGGCAATGGCTCC....................CTGATGGCCCC 1275
| |||| ||| | ||| || ||
sj04377 2635 TCCTGGTCCCAAGTGATCCGCCCGCCTCGGCCTCCCAAGGTGCTGTGATT 2684
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mbj00169 1276 GGAGGTGTCCACAGCCCATTCTGGCCCCAG.................... 1305
| |||||| | || ||||||| | |
sj04377 2685 GTAGGTGTGAGCCACCGTGTCTGGCCTCTGAACAACTTTTTCAGCAACTA 2734
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbj00169 1306 .......TGCGGTAATTGACTACAGCAAAGCCGATACCTGGGCTGTGGGG 1348
| | | |||| || || | | | || ||||||| |
sj04377 2735 AAAAAGCCACAGGAGTTGA..ACTGCTAGGATTCTGACTATGCTGTGGTG 2782
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbj00169 1349 GCCATCGC.............................CTATGAAATCTTT 1369
|| | || | || ||||
sj04377 2783 GCTAGTGCTCCTACTCCTACCTACATTAAAATCTGTTTTTTGTTCTCTTG 2832
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbj00169 1370 GGGCTTGCCAATCCCTT................................. 1386
|| ||| | ||||
sj04377 2833 TAACTAGCCTTTACCTTCCTAACACAGAGGATCTGTCACTGTGGCTCTGG 2882
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbj00169 1387 .................................................. 1387
sj04377 2883 CCCAAACCTGACCTTCACTCTGGAACGAGAACAGAGGTTTCTACCCACAC 2932
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbj00169 1387 ......................................CTATGGCCAAGG 1398
|| | || |
sj04377 2933 CGTCCCCTCGAAGCCGGGGACAGCCTCACCTTGCTGGCCTCTCGCTGGAG 2982
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbj00169 1399 CAGTGCCCAC........................................ 1408
|||||||| |
sj04377 2983 CAGTGCCCTCACCAACTGTCTCACGTCTGGAGGCACTGACTCGGGCAGTG 3032
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbj00169 1409 ...............CTGGAGAGCCGCAGCTACCAGGAAGCTCAACTGCC 1443
|| | ||| || ||| || | | | ||
sj04377 3033 CAGGTAGCTGAGCCTCTTGGTAGCTGCGGCTTTCAAGGTGGGCCTTGCCC 3082
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbj00169 1444 TG..........................AGATACCTAAGTCGGTGCCTC. 1466
|| |||| | || || || |||
sj04377 3083 TGGCCGTAGAAGGGATTGACAAGCCCGAAGATTTCATAGGCGATGGCTCC 3132
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbj00169 1467 .....CAGAGGCAAGACGGCTGGTGAGG....TCACTGCTCCAGCGAGAG 1507
| ||||| | || || | ||||||| | | | ||
sj04377 3133 CACTGCCCAGGCATCAGCCTTGCTGTAGTCAATCACTGCCCTGGGGCCAG 3182
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbj00169 1508 GCCAGCAAGAGACCGTCTGCAC............................ 1529
| | | | | | |||| |
sj04377 3183 GACGGGCCGTGGACACCTGCTCAGAAGCAGTGGGTGAGACATCACGCTGC 3232
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbj00169 1530 .......GCTTAGCTGCAAATGTGCTGCACTTAAGC....CTCTGGGGCG 1568
|| | || |||| |||||| | | | | ||||
sj04377 3233 CCGCCCATCTAACCTTTTCATGTCCTGCACATCACCTGATCCATGGGCTA 3282
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbj00169 1569 AGCATCTTCTAGCCCTGAAGAACCTGAAATTGGACAAGATGATCGCCTGG 1618
| | | || | ||||| | | || | || |
sj04377 3283 ATCTGAACTCTGTCCCAAGGAACCCAGAGCTTGAGTGAGCTGTGGCTCAG 3332
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbj00169 1619 CTCTTGCAGCAGTCAGCAGCCAC........................... 1641
| | || ||| || ||
sj04377 3333 ACCCAGAAGGGGTCTGCTTAGACCACCTGGTTTATGTGACAGGACTTGCA 3382
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mbj00169 1642 ...........TCTGCTGGCTGACAGGCTGAGAGAGAAGAGCTGCGTGGA 1680
|| || | || || || ||| | |
sj04377 3383 TTCTCCTGGAACATGAGGGAACGCCGGAGGAAAGCAAAGTGGCAGGGAAG 3432
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mbj00169 1681 GACAAAGCTGCAGATGCTGTTTCTGGCTAACCTGGAGTGTGAGGCTCTCT 1730
|| | || || || || | | | |||| || | ||
sj04377 3433 GAACTTGTGCCAAATTATGGGTCAGAAAAGATGGAGGTGTTGGGTTATC. 3481
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbj00169 1731 GCCAGGCAGCCCTCCTCCTCTCTTC......................... 1755
| ||||| | ||||| |||
sj04377 3482 ACAAGGCATCGAGTCTCCTGCATTCAGTGGACATGTGGGGGAAGGGCTGC 3531
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbj00169 1756 .................................CTGGAGGGCAGCCCCAT 1772
|| ||| |
sj04377 3532 CGATGGCGCATGACACACTCGGGACTCACCTCTGGGGCCATCAGACAGCC 3581
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbj00169 1773 GATGGCTCTGTGCTCCAGTTACTAAAAGACTAAGGGGCATCTGTGTCCTG 1822
| | | | | |||| ||| | | || | ||||| ||| | |
sj04377 3582 GTTTCCGCCCCGATCCACGTACCAGCTG.CTGAAGGGCAACTGCAGGCCG 3630
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbj00169 1823 ATGTCATGATGGTGTACGAAGGCTGAAGAAGGTGGCTTGGCTGG..GTGG 1870
||| | || | | || | || || | | | ||
sj04377 3631 ATGCTCTCATCAGCCAGGCAGCAGCCAAAATCTGCGATCACCAGCCAGGG 3680
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbj00169 1871 GCAGGAGTCAGGGGACAAGC.............................. 1890
|||| ||| ||| | |||
sj04377 3681 GCAGCCGTCTGGGAAGGAGCAAGCAAAGTGACCATTTCTCCTCCCCTCCT 3730
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbj00169 1891 .................................................T 1891
|
sj04377 3731 TCCCTCTGAGAGGCCCTCCTATGTCCCTACTAAAGCCACCAGCAAGACAT 3780
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbj00169 1892 GGAGTAGAGGGAGGGGCTGGTCAGCCTTGG.......GCTCAGCAAATGG 1934
| | |||| | |||| |||| | |||||||
sj04377 3781 AGCTGACAGGGGCTAATGGCTCAGTGTTGGCCCAGGAGGTCAGCAAGGCC 3830
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbj00169 1935 GAAGAACAGCCTTGAACAGCTCAGGAGGGAGAGAGGCACTACC....... 1977
||| | | ||| || | | || || | | ||
sj04377 3831 TGAGAGCTGATCAGAAGGCCTGCTGTGCGAACACGGAAATGCCTCCAGTC 3880
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbj00169 1978 ............................TGTGCCCGTCCAGTTAGGTTCT 1999
|| || || || ||
sj04377 3881 TCTGTGCGCGATGCCCTGTTGAACCAGATGGTCCACGCCTTCCAGCAGCT 3930
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbj00169 2000 TGGGCAGAATTAAGACATCAGGCCAGACAAGGAGT...........TGGT 2038
|||| || | | | | | | | | || ||
sj04377 3931 GCAGCAGCATCATGGCGGCGAGGCGGGGGCTGGGTGTGTTCACACAAAGT 3980
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbj00169 2039 AAGCTATAGAGGGCCAGACAGGGAATGAAGTAGTTGTAATGACTAACCTA 2088
|| | ||| | || || | | | | |||| | || |
sj04377 3981 CTGCAGTGGAGAGGAAGCCACGATACTTCACTGGGGCCATGAGGAGCC.A 4029
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbj00169 2089 TCACTGAG...GCAAAGGCCAAGCAAGCACTGCA...GTGAGGCCAACAC 2132
|||| || || | ||||| | || | | | |||| | ||
sj04377 4030 GAGGTGAGCAAGCCAAAGGGAAGCAGGAACAGGAGATGCGAGGAAAGAAC 4079
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbj00169 2133 TGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATTTTTCCAACCACTTAG 2182
| | | | || | | | |||| | || || || | |
sj04377 4080 AGCATGTGGACAGT.GGAACCACGTTCCTACAAGTTCAAGAATCAGTAAC 4128
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbj00169 2183 AAATGCAAAAACATAGGTTT...................AATTTGTAAGC 2213
||| ||| | | | | || | | ||
sj04377 4129 TGATGGAAATTCCCGTGGCTCACTCCTGTAATCCCAGCAATTTGGGAGGC 4178
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mbj00169 2214 AGCAACCAGCATGGCTCATAGTCAAATTTACCAATTCCTGGGCTAAATGC 2263
| | ||| || | | | | || | | |
sj04377 4179 TGAGGCAGGCAATTGCTTGAGCCCAGGAGTTCGAGGCCAGCCCGGGCAAC 4228
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mbj00169 2264 ATTCTTAATGTCTAACTCTTTAAAGA.TACGAGCATTA............ 2300
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sj04377 4229 ATGGAGAAACTCTGTCTCTACAAAAACTACAAAAATTAGCTGGGCATGGT 4278
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mbj00169 2301 .................................................. 2301
sj04377 4279 GGCATGTGCCTGCAGACCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCA 4328
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mbj00169 2301 .................................................. 2301
sj04377 4329 CTTGAGCCCAGGGAGGTTGAGGCTGCAGTGAGCCAAGATCACGCCACTGC 4378
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mbj00169 2301 ......................AAGACAGTCTCCATGCCG.......... 2318
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sj04377 4379 TCTCCAGCCTGGGCAACAGAGTAAGACCCTGTCTCAGAAAAATAAAAGAA 4428
4451 ----+----*--- 4463
mbj00169 2319 ............. 2319
sj04377 4429 AATTTGAGTTTGC 4441