Comparison of KIAA cDNA sequences between mouse and human (KIAA1848)

<<Original sequence data>>

mouse  mKIAA1848 (mbj00047)     length:   3186 bp, CDS:     1 -   807
human   KIAA1848  (bm03548)     length:   1985 bp, CDS:     3 -  1340

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:        -           -        -          -
  CDS:     90 -   909     596       66      10.0
3'UTR:    910 -  3448     833      252      23.2

amino acid

  CDS:     90 -   909     208       16      7.1
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mbj00047     1 .................................................. 1
                                                                 
bm03548      1 CGGCAGGCGGGTGCGCGGAGGGCTGGTGCCCCGCAGCAGGTGGGCGGGGT 50
                 A  G  G  C  A  E  G  W  C  P  A  A  G  G  R  G  

            51 ----+----*----+----*----+----*----+----*----+----* 100
                                                      L  W  G  - 
mbj00047     1 .......................................CTCTGGGGCCG 11
                                                      | || ||||||
bm03548     51 GCGGTTGGCGGCGGCGGCTGGGCCGGGGGCTGCCGGCTGCGCTCGGGCCG 100
               A  V  G  G  G  G  W  A  G  G  C  R  L  R  S  G  R 

           101 ----+----*----+----*----+----*----+----*----+----* 150
                A  W  R  P      Y  G  R  A  M  D  F  N  M  K  K  
mbj00047    12 .GCGTGGCGGCCCTGCGTACGGGCGCGCCATGGACTTCAACATGAAGAAG 60
                ||| ||||||    ||| ||||| |||||||||||||||||||||||||
bm03548    101 TGCGCGGCGGC....CGTGCGGGCACGCCATGGACTTCAACATGAAGAAG 146
                A  R  R  P      C  G  H  A  M  D  F  N  M  K  K  

           151 ----+----*----+----*----+----*----+----*----+----* 200
               L  A  S  D  A  G  I  F  F  T  R  A  V  Q  F  T  E 
mbj00047    61 CTGGCGTCGGACGCGGGCATCTTCTTCACTCGGGCGGTGCAGTTCACAGA 110
               ||||||||||||||||||||||||||||| ||||||||||||||||| ||
bm03548    147 CTGGCGTCGGACGCGGGCATCTTCTTCACCCGGGCGGTGCAGTTCACGGA 196
               L  A  S  D  A  G  I  F  F  T  R  A  V  Q  F  T  E 

           201 ----+----*----+----*----+----*----+----*----+----* 250
                E  K  F  G  Q  A  E  K  T  E  L  D  A  H  F  E  N
mbj00047   111 GGAGAAGTTTGGCCAGGCTGAGAAGACGGAGCTTGACGCCCACTTTGAAA 160
               |||||| |||||||||||||||||||| |||||||| |||||||||||||
bm03548    197 GGAGAAATTTGGCCAGGCTGAGAAGACTGAGCTTGATGCCCACTTTGAAA 246
                E  K  F  G  Q  A  E  K  T  E  L  D  A  H  F  E  N

           251 ----+----*----+----*----+----*----+----*----+----* 300
                 L  L  A  R  A  D  S  T  K  N  W  T  E  R  I  L  
mbj00047   161 ACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTG 210
               |||| || || ||||||||||||||||||||||||||||||  |||| ||
bm03548    247 ACCTTCTGGCCCGGGCAGACAGCACCAAGAACTGGACAGAGAAGATCTTG 296
                 L  L  A  R  A  D  S  T  K  N  W  T  E  K  I  L  

           301 ----+----*----+----*----+----*----+----*----+----* 350
               R  Q  T  E  V  L  L  Q  P  N  P  S  A  R  V  E  E 
mbj00047   211 AGGCAGACCGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGGA 260
               |||||||| ||||||||||||||||||||||||||||| |||||||||||
bm03548    297 AGGCAGACAGAGGTGCTGCTGCAGCCCAACCCCAGTGCCCGAGTGGAGGA 346
               R  Q  T  E  V  L  L  Q  P  N  P  S  A  R  V  E  E 

           351 ----+----*----+----*----+----*----+----*----+----* 400
                F  L  Y  E  K  L  D  R  K  V  P  S  R  V  T  N  G
mbj00047   261 GTTCCTATATGAGAAGCTGGACAGAAAGGTGCCCTCGAGAGTCACCAATG 310
               |||||| ||||||||||||||||| ||||| ||||| || |||||||| |
bm03548    347 GTTCCTGTATGAGAAGCTGGACAGGAAGGTCCCCTCAAGGGTCACCAACG 396
                F  L  Y  E  K  L  D  R  K  V  P  S  R  V  T  N  G

           401 ----+----*----+----*----+----*----+----*----+----* 450
                 E  L  L  A  Q  Y  M  A  E  A  A  S  E  L  G  P  
mbj00047   311 GGGAGCTGCTGGCTCAGTACATGGCGGAGGCAGCCAGCGAGCTGGGCCCC 360
               ||||||||||||||||||||||||| || || ||||| |||||||| || 
bm03548    397 GGGAGCTGCTGGCTCAGTACATGGCAGACGCGGCCAGTGAGCTGGGGCCG 446
                 E  L  L  A  Q  Y  M  A  D  A  A  S  E  L  G  P  

           451 ----+----*----+----*----+----*----+----*----+----* 500
               S  T  P  Y  G  K  T  L  I  K  V  S  E  A  E  K  R 
mbj00047   361 AGCACTCCCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCG 410
               | ||| ||||| |||||||| |||||||||||| |||||||||| |||| 
bm03548    447 ACCACCCCCTATGGGAAGACACTGATCAAGGTGGCAGAAGCTGAAAAGCA 496
               T  T  P  Y  G  K  T  L  I  K  V  A  E  A  E  K  Q 

           501 ----+----*----+----*----+----*----+----*----+----* 550
                L  G  A  A  E  R  D  F  I  H  T  A  S  L  S  F  L
mbj00047   411 CCTCGGAGCAGCAGAGCGGGATTTCATTCACACTGCCTCCCTCAGCTTCC 460
                || ||||| || ||| ||||||| || ||||| |||||| |||||||||
bm03548    497 ACTGGGAGCCGCGGAGAGGGATTTTATCCACACGGCCTCCATCAGCTTCC 546
                L  G  A  A  E  R  D  F  I  H  T  A  S  I  S  F  L

           551 ----+----*----+----*----+----*----+----*----+----* 600
                 T  P  L  R  N  F  L  E  G  D  W  K  T  I  S  K  
mbj00047   461 TCACACCCCTGCGGAACTTCCTAGAGGGGGACTGGAAAACGATTTCGAAG 510
               |||||||| |||| |||||||| |||||||||||||| || || ||||||
bm03548    547 TCACACCCTTGCGCAACTTCCTGGAGGGGGACTGGAAGACCATCTCGAAG 596
                 T  P  L  R  N  F  L  E  G  D  W  K  T  I  S  K  

           601 ----+----*----+----*----+----*----+----*----+----* 650
               E  R  R  L  L  Q  N  R  R  L  D  L  D  A  C  K  A 
mbj00047   511 GAGAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGC 560
               |||||||||||||| || ||||||||||| ||| ||||||||||||||||
bm03548    597 GAGAGGCGGCTCCTCCAAAACCGGCGTCTGGACTTGGATGCCTGCAAAGC 646
               E  R  R  L  L  Q  N  R  R  L  D  L  D  A  C  K  A 

           651 ----+----*----+----*----+----*----+----*----+----* 700
                R  L  K  K  A  K  A  A  E  A  K  A  T            
mbj00047   561 CCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACG.......... 600
                 |||| |||||||||||||| || |||||||||||||||          
bm03548    647 GAGGCTGAAGAAGGCCAAGGCTGCAGAAGCCAAAGCCACGTGTGAGGGAG 696
                R  L  K  K  A  K  A  A  E  A  K  A  T  C  E  G  D

           701 ----+----*----+----*----+----*----+----*----+----* 750
                 T  V  P  D  F  Q  E  T  R  P  R  N  Y  I  L  S  
mbj00047   601 ..ACGGTGCCTGACTTTCAGGAGACTAGACCTCGTAATTACATTCTATCG 648
                 |||||||||||||||||||||||||||||||||||||||||||| |||
bm03548    697 ATACGGTGCCTGACTTTCAGGAGACTAGACCTCGTAATTACATTCTCTCG 746
                 T  V  P  D  F  Q  E  T  R  P  R  N  Y  I  L  S  

           751 ----+----*----+----*----+----*----+----*----+----* 800
               A  S  A  S  A                                     
mbj00047   649 GCCAGCGCCTCCGCGGTAAGCAACCCTCCTGCCATTCCTTGCCCCACCCT 698
               ||||||||||||||                                    
bm03548    747 GCCAGCGCCTCCGC.................................... 760
               A  S  A  S  A                                     

           801 ----+----*----+----*----+----*----+----*----+----* 850
mbj00047   699 GGCCTCCTTGGCCCACAGCTCTTGTCACTGGCTCTGCCAGCGCAGAACCA 748
                                                                 
bm03548    761 .................................................. 761

           851 ----+----*----+----*----+----*----+----*----+----* 900
mbj00047   749 GAAGACAGCAGGTGAGGCAAAGGGTCCTGCTCATGTTGCAGGTTGCCCTG 798
                                                                 
bm03548    761 .................................................. 761

           901 ----+----*----+----*----+----*----+----*----+----* 950
mbj00047   799 AGGGGCTGAGGTGCAGCTCAGAACAGGGAAGTGACAACTCCATGTGGCCC 848
                                                                 
bm03548    761 .................................................. 761

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mbj00047   849 TGTCTGGTCCAGCAGGCAGGCTGGACTGGCTTCTCCCTAGGCAAGGTAGA 898
                                                                 
bm03548    761 .................................................. 761

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mbj00047   899 AGATATTTTGACTAGCTGTCCAGAAAAACCCCTTCGTGTCCTTAGGACAG 948
                                                                 
bm03548    761 .................................................. 761

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mbj00047   949 CACAGTACCACCTCTAGGGAACCTGAGGAAATTTCCATTCTGCACTTTCT 998
                                                                 
bm03548    761 .................................................. 761

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mbj00047   999 CCCACAAAGTCACAGCACTCCAGCCTCCTTATGGGTCTGGGGGGACCCTG 1048
                                                                 
bm03548    761 .................................................. 761

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mbj00047  1049 AGGAAAGAGGGGGGCCGCCTAGGTCTGGCTTCCTGTCTCAGACTCTTGCC 1098
                                                                 
bm03548    761 .................................................. 761

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbj00047  1099 TTAGCACCATGGTAGGTTGCAAACTAGATGGCCTCGGAAGCTCCTGGAAA 1148
                                                                 
bm03548    761 .................................................. 761

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mbj00047  1149 GCAGGTGGGAGGTCAGCCTGAGGAGCAGGTCAGAGGTAAGATGGAGGAAG 1198
                                                                 
bm03548    761 .................................................. 761

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mbj00047  1199 GCAGGCTAGGCTGGCAGAGTAGACTGGTTGAGTTAGTAGGTGTCTATTGA 1248
                                                                 
bm03548    761 .................................................. 761

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mbj00047  1249 CTGTGGGGGGTTGGCCAGCCACACCTCTCACCCTATGCCCTGGGTGAAAC 1298
                                                                 
bm03548    761 .................................................. 761

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mbj00047  1299 TCCCGCACAGGCCATCTGACCCCTCTGCTCCTCTTCTGAGCATGCCACTG 1348
                                                                 
bm03548    761 .................................................. 761

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mbj00047  1349 TGTGATTTGTGCTGTCATTCCATGGCTGGCCATTGTCTTTGAGATGTCAA 1398
                                                                 
bm03548    761 .................................................. 761

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mbj00047  1399 TGCTCTGGCCTGTTAACTAGCCCTCCAACAGGGCACACGACAATGGTGCT 1448
                                                                 
bm03548    761 .................................................. 761

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mbj00047  1449 CACTGTGGGCTGTGCATTCTGCTGGCCCAGTTCAACTGTCCATGTGTCAG 1498
                                                                 
bm03548    761 .................................................. 761

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mbj00047  1499 GGTGTTGTCCTAGGCCAGATTTCCACAAATGACCATAAACTGGGTCTCCT 1548
                                                                 
bm03548    761 .................................................. 761

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mbj00047  1549 AAGTCATGGTGGGGGGAGGGGGGCTTTTCTTCCCTAGACTCTGGATGACA 1598
                                                                 
bm03548    761 .................................................. 761

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mbj00047  1599 CTTCCCGCTCCCCTCCCTGGGCCGAGTGGAAGGAGAAACATCCCGGAGGG 1648
                                                                 
bm03548    761 .................................................. 761

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbj00047  1649 TGGAGGCTGCCCTGTTTTTTTCTTTTGCCACTGACCCCAAGTGTGACTCT 1698
                                                                 
bm03548    761 .................................................. 761

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mbj00047  1699 GGCCCGAGGCTGCCTTCCTCTGCCGGAGGACAGAAAGGTTCAGTGACTGG 1748
                                                                 
bm03548    761 .................................................. 761

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mbj00047  1749 CCCAGGGTCACTTGTCCTGTCCTGCCTCCAAGCAGGAGTCAGGGTGGGGT 1798
                                                                 
bm03548    761 .................................................. 761

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mbj00047  1799 GGGGACATTCGGTCTCTAAGACCCACTCAGAGTTGGGGGAGGCATAGGAA 1848
                                                                 
bm03548    761 .................................................. 761

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mbj00047  1849 AAGTACAAGCAAGACTTGCAGCTGGCTGGCCCTGCATGCAGCATGCTAGA 1898
                                                                 
bm03548    761 .................................................. 761

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mbj00047  1899 GGGATGCGTGCCACCTCCCTGCCCTTACACCAAACCTTGTTCCAGCCTCA 1948
                                                                 
bm03548    761 .................................................. 761

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbj00047  1949 GCTCCTGGTTGGGCTGGGGTGGGTTGTGCAAGATAGGGTGGGCAGAGGTT 1998
                                                                 
bm03548    761 .................................................. 761

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbj00047  1999 GGGTCCCTGGGAGCTGGAGCAGGCACAGGCTTTGGCCTCTGGCTGTCCCT 2048
                                                                 
bm03548    761 .................................................. 761

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbj00047  2049 GCTCTTCCACTCACCAGTGCCCACCTTGCCTTCCTTGCTGCCTGGTGCTC 2098
                                                                 
bm03548    761 .................................................. 761

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
                              L  W  N  D  E  V  D  K  A  E  Q  E 
mbj00047  2099 TTCTGGTCTCCATAGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGA 2148
                             ||| ||||| |||||||| |||||||| ||||||||
bm03548    761 ..............GCTCTGGAATGATGAAGTGGACAAGGCCGAGCAGGA 796
                              L  W  N  D  E  V  D  K  A  E  Q  E 

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
                L  R  V  A  Q  T  E  F  D  R  Q  A  E  V  T  R  L
mbj00047  2149 GCTTCGAGTGGCGCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTC 2198
               ||| || ||||| |||||||||||||||||||| ||||||||||||||||
bm03548    797 GCTCCGCGTGGCCCAGACAGAGTTTGACCGGCAAGCAGAAGTGACCCGTC 846
                L  R  V  A  Q  T  E  F  D  R  Q  A  E  V  T  R  L

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
                 L  L  E  G  I  S  S  T  H  V  N  H  L  R  C  L  
mbj00047  2199 TCCTGCTGGAGGGGATCAGCAGTACTCATGTGAACCACCTTCGCTGCCTC 2248
               || |||||||||| ||||| || ||||| ||||||||||| |||||||||
bm03548    847 TCTTGCTGGAGGGAATCAGTAGCACTCACGTGAACCACCTGCGCTGCCTC 896
                 L  L  E  G  I  S  S  T  H  V  N  H  L  R  C  L  

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
               H  E  F  V  K  S  Q  T  T  Y  Y  A  Q  C  Y  R  H 
mbj00047  2249 CATGAGTTCGTCAAGTCTCAGACAACCTACTATGCACAGTGCTACCGCCA 2298
               || ||||||||||||||||||||||||||||| |||||||||||||||||
bm03548    897 CACGAGTTCGTCAAGTCTCAGACAACCTACTACGCACAGTGCTACCGCCA 946
               H  E  F  V  K  S  Q  T  T  Y  Y  A  Q  C  Y  R  H 

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
                M  L  D  L  Q  K  Q  L  G  -                 F  P
mbj00047  2299 CATGCTGGATCTGCAGAAACAGCTAGGCAG...............ATTTC 2333
               |||||||||  ||||||| ||||| |||||               |||||
bm03548    947 CATGCTGGACTTGCAGAAGCAGCTGGGCAGCTCCCAGGGTGCCATATTTC 996
                M  L  D  L  Q  K  Q  L  G  S  S  Q  G  A  I  F  P

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
                 G  T  F  V  G  T  T  E  P  A  S  P  P  L  S  S  
mbj00047  2334 CAGGCACCTTCGTGGGCACCACAGAGCCTGCCTCCCCACCCCTGAGCAGC 2383
               | |||||||||||||||||||||||||| |||||||||||||||||||||
bm03548    997 CCGGCACCTTCGTGGGCACCACAGAGCCCGCCTCCCCACCCCTGAGCAGC 1046
                 G  T  F  V  G  T  T  E  P  A  S  P  P  L  S  S  

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
               T  S  P  T  T  T  A  A  T  M  P  V  V  P  T  G  A 
mbj00047  2384 ACCTCACCTACCACCACTGCGGCCACCATGCCTGTGGTACCTACTGGGGC 2433
               |||||||| |||||  |||||||||| ||||||||||| ||  ||| |||
bm03548   1047 ACCTCACCCACCACTGCTGCGGCCACTATGCCTGTGGTGCCCTCTGTGGC 1096
               T  S  P  T  T  A  A  A  T  M  P  V  V  P  S  V  A 

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
                V  L  A  P  P  E  E  A  A  L  C  L  E  E  V  A  P
mbj00047  2434 TGTCTTGGCCCCTCCAGAAGAGGCAGCCCTCTGCCTGGAGGAGGTGGCTC 2483
                  | |||||||||| |  |||||  | ||||||||||| |||||||| |
bm03548   1097 CAGCCTGGCCCCTCCGGGGGAGGCCTCGCTCTGCCTGGAAGAGGTGGCCC 1146
                S  L  A  P  P  G  E  A  S  L  C  L  E  E  V  A  P

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
                 P  A  S  G  T  R  K  A  R  V  L  Y  D  Y  E  A  
mbj00047  2484 CCCCAGCCAGTGGGACTCGAAAGGCCCGGGTGCTCTACGACTACGAGGCA 2533
               |||| ||||||||||| || || || ||||||||||| ||||||||||||
bm03548   1147 CCCCTGCCAGTGGGACCCGCAAAGCTCGGGTGCTCTATGACTACGAGGCA 1196
                 P  A  S  G  T  R  K  A  R  V  L  Y  D  Y  E  A  

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
               A  D  S  S  E  L  A  L  L  A  D  E  L  I  T  V  Y 
mbj00047  2534 GCTGACAGCAGTGAGCTGGCCCTGCTGGCTGATGAGCTCATCACTGTCTA 2583
               || |||||||||||||||||||||||||||||||||||||||||||||||
bm03548   1197 GCCGACAGCAGTGAGCTGGCCCTGCTGGCTGATGAGCTCATCACTGTCTA 1246
               A  D  S  S  E  L  A  L  L  A  D  E  L  I  T  V  Y 

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
                S  L  P  G  M  D  P  D  W  L  I  G  E  R  G  N  K
mbj00047  2584 CAGCCTGCCAGGCATGGATCCCGACTGGCTCATTGGTGAGAGAGGCAACA 2633
               ||||||||| |||||||| || |||||||||||||| |||||||||||||
bm03548   1247 CAGCCTGCCTGGCATGGACCCTGACTGGCTCATTGGCGAGAGAGGCAACA 1296
                S  L  P  G  M  D  P  D  W  L  I  G  E  R  G  N  K

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
                 K  G  K  V  P  V  T  Y  L  E  L  L  S  *        
mbj00047  2634 AGAAGGGCAAGGTTCCTGTCACCTACCTGGAACTTCTCAGCTAAGCAG.. 2681
               ||||||||||||| |||||||||||| ||||||| |||||||| ||||  
bm03548   1297 AGAAGGGCAAGGTCCCTGTCACCTACTTGGAACTGCTCAGCTAGGCAGGT 1346
                 K  G  K  V  P  V  T  Y  L  E  L  L  S  *        

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbj00047  2682 ..CCCCTTCCC...................................AGGC 2694
                 |||| ||||                                     ||
bm03548   1347 GCCCCCATCCCCCCCGCATTCTGGCCTAGGCAGGAGAGGATGGGCGCAGC 1396

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbj00047  2695 TCTGCCACTTAGAGTCGTCTGCTGGCCACAGAGCTGCTTAGGATAAGG.G 2743
                |||||||||| | | || || |||  ||| || || | ||  |  || |
bm03548   1397 CCTGCCACTTA.ACTTGTTTGTTGGTGACACAGTTGTTCAGAGTGGGGAG 1445

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbj00047  2744 ACCTAACCCTTTTCTGGCTGTGCCC...GTCATTCAGCTATTAAAGAGCC 2790
               |  | ||||  ||||| |  |||||   ||||   |||| | |  | |||
bm03548   1446 AATTCACCCCATTCTGTCCCTGCCCCTAGTCACCTAGCTGTGAGGGTGCC 1495

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbj00047  2791 CACAAGACAGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGA.... 2836
                   || | ||||||| |||  ||||||  | || |||||||||||    
bm03548   1496 ..TGAGGCTGAATGGCTCCA..CCCCTCCCCCAGCCCTGCTTCTGACCTG 1541

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbj00047  2837 .......................CCTGCAACCCTGCACACCCCAGGCTTC 2863
                                      |||||| ||| |  |||||||  | ||
bm03548   1542 TGGCTCTGGAGCCCCTGCCCCTGCCTGCATCCCCGAGCACCCCA.CCCTC 1590

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbj00047  2864 CCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGA.CACCACCATGGGC 2912
               |  |||||  |||||  | |||| |  |       | |  |||   |  |
bm03548   1591 CAGGCTCCACTAAGGAGGGAGGGGCTGTCTGCAGCAGCTGCACTCAGCAC 1640

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbj00047  2913 CCAGGATATGCTGGGGATG..GATGCTCTTGGCATGAAAGAACATCTGCC 2960
               | |||  | | |||||  |  |  | |     || |||    ||  ||| 
bm03548   1641 CTAGGCCAGGGTGGGGCCGCCGCAGATGGGCTCAGGAAGCCCCAGGTGCA 1690

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbj00047  2961 TTCTG..................................GCTGTGGAAGG 2976
                || |                                   | | |||| |
bm03548   1691 CTCAGCGAGAGCCCTGCCTTTCAGTTGCCAAAAGCTGCATCAGGGGAATG 1740

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbj00047  2977 TTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACC 3026
                 |   || ||| |||  | | |||||  |  || |  |||  |    ||
bm03548   1741 CGGCAAGGCACA.CAGGGCTCTGGCAGCCCCTGGGGACTGGGCGCTGCCC 1789

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbj00047  3027 ...AGAAGGGTCAG.......................CCAGAGCAGCAGC 3050
                   || |||  ||                       || |||||||| |
bm03548   1790 CTGGGAGGGGAGAGCCTGGCCAGGGCTGGTGTTGGGCCCGGAGCAGCATC 1839

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbj00047  3051 ACCAAGTGCT....GCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAG 3096
                 |  |||||     || | | |  ||||||  ||||  ||   |  |||
bm03548   1840 TTCCGGTGCTATCCTCCCCTCCCACCCCTCACAGCTCAAGCCAAGTCCAG 1889

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbj00047  3097 TGGCTACAGCAGTCATTCCT......TCAGTTTCTAACTAACATTCTGAC 3140
                |||  |||   |||   ||      ||| ||| || ||    || | ||
bm03548   1890 CGGCCGCAGTCTTCACCTCTCCACACTCACTTTTTATCTGGTGTTTTTAC 1939

          3401 ----+----*----+----*----+----*----+----*----+--- 3448
mbj00047  3141 CTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATC..CTTTGTGTGCG 3186
                ||||||||   | ||||||||| || |||||| |  | |||||||||
bm03548   1940 TTCTGCCTG..CGTTTGCTCTCTAGCCAATAAACCGTCCTTGTGTGCG 1985