# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh04778.fasta.nr -Q ../query/mKIAA1625.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 mKIAA1625, 222 aa
 vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library

2727779818 residues in 7921681 sequences
 statistics sampled from 60000 to 7919311 sequences
  Expectation_n fit: rho(ln(x))= 4.9053+/-0.00018; mu= 9.5344+/- 0.010
 mean_var=63.4271+/-12.351, 0's: 24 Z-trim: 44  B-trim: 23 in 1/66
 Lambda= 0.161041

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7921681)
gi|21739781|emb|CAD38919.1| hypothetical protein [ ( 295) 1519 361.0 1.1e-97
gi|26330149|dbj|BAC28813.1| unnamed protein produc ( 355) 1519 361.1 1.2e-97
gi|26381191|dbj|BAB29770.2| unnamed protein produc ( 553) 1519 361.2 1.8e-97
gi|119597095|gb|EAW76689.1| SMAD specific E3 ubiqu ( 581) 1519 361.3 1.8e-97
gi|119597092|gb|EAW76686.1| SMAD specific E3 ubiqu ( 582) 1519 361.3 1.8e-97
gi|148687064|gb|EDL19011.1| SMAD specific E3 ubiqu ( 710) 1519 361.3 2.1e-97
gi|3694664|gb|AAC62434.1| similar to NEDD-4 (KIA00 ( 712) 1519 361.3 2.1e-97
gi|6446606|gb|AAF08298.2| E3 ubiquitin ligase SMUR ( 722) 1519 361.3 2.2e-97
gi|87044886|ref|NP_083714.3| Smad ubiquitination r ( 728) 1519 361.3 2.2e-97
gi|223460552|gb|AAI36805.1| SMURF1 protein [Homo s ( 728) 1519 361.3 2.2e-97
gi|20810398|gb|AAH29097.1| SMAD specific E3 ubiqui ( 728) 1519 361.3 2.2e-97
gi|149034904|gb|EDL89624.1| rCG42768 [Rattus norve ( 728) 1519 361.3 2.2e-97
gi|219518262|gb|AAI44415.1| SMURF1 protein [Homo s ( 728) 1519 361.3 2.2e-97
gi|74181841|dbj|BAE32623.1| unnamed protein produc ( 731) 1519 361.3 2.2e-97
gi|51094634|gb|EAL23886.1| E3 ubiquitin ligase SMU ( 731) 1519 361.3 2.2e-97
gi|85681896|sp|Q9CUN6.2|SMUF1_MOUSE RecName: Full= ( 731) 1519 361.3 2.2e-97
gi|17865625|sp|Q9HCE7.2|SMUF1_HUMAN RecName: Full= ( 757) 1519 361.3 2.2e-97
gi|114614808|ref|XP_528043.2| PREDICTED: Smad ubiq ( 794) 1519 361.3 2.3e-97
gi|194218685|ref|XP_001494592.2| PREDICTED: SMAD s ( 722) 1515 360.4 4.1e-97
gi|126334572|ref|XP_001369671.1| PREDICTED: simila ( 742) 1511 359.5   8e-97
gi|118097811|ref|XP_414794.2| PREDICTED: similar t ( 729) 1510 359.2 9.3e-97
gi|224070333|ref|XP_002190260.1| PREDICTED: SMAD s ( 732) 1510 359.2 9.3e-97
gi|149409162|ref|XP_001512326.1| PREDICTED: simila ( 750) 1510 359.2 9.5e-97
gi|73958097|ref|XP_851049.1| PREDICTED: similar to ( 740) 1509 359.0 1.1e-96
gi|194678687|ref|XP_591663.3| PREDICTED: similar t ( 837) 1504 357.9 2.7e-96
gi|37590632|gb|AAH59201.1| WW domain containing E3 ( 731) 1449 345.1 1.7e-92
gi|17865628|sp|Q9PUN2.1|SMUF1_XENLA RecName: Full= ( 731) 1448 344.8   2e-92
gi|47209050|emb|CAF92291.1| unnamed protein produc ( 774) 1382 329.5 8.7e-88
gi|224074552|ref|XP_002194542.1| PREDICTED: SMAD s ( 753) 1347 321.4 2.4e-85
gi|118099762|ref|XP_425380.2| PREDICTED: similar t ( 753) 1345 320.9 3.3e-85
gi|149635098|ref|XP_001510726.1| PREDICTED: hypoth ( 748) 1337 319.0 1.2e-84
gi|218547424|sp|A9JRZ0.1|SMUF2_DANRE RecName: Full ( 765) 1337 319.1 1.2e-84
gi|123896339|sp|Q2TAS2.1|SMUF2_XENLA RecName: Full ( 751) 1336 318.8 1.4e-84
gi|16306918|gb|AAH09527.1| SMURF2 protein [Homo sa ( 288) 1326 316.2 3.3e-84
gi|73965391|ref|XP_537589.2| PREDICTED: similar to ( 738) 1330 317.4 3.6e-84
gi|194216751|ref|XP_001917141.1| PREDICTED: SMAD s ( 753) 1330 317.4 3.7e-84
gi|149054600|gb|EDM06417.1| SMAD specific E3 ubiqu ( 748) 1328 317.0 5.1e-84
gi|119614600|gb|EAW94194.1| SMAD specific E3 ubiqu ( 507) 1326 316.4 5.2e-84
gi|119614601|gb|EAW94195.1| SMAD specific E3 ubiqu ( 735) 1326 316.5 6.9e-84
gi|12018151|gb|AAG45422.1| E3 ubiquitin ligase SMU ( 748) 1326 316.5   7e-84
gi|17865624|sp|Q9HAU4.1|SMUF2_HUMAN RecName: Full= ( 748) 1326 316.5   7e-84
gi|114670061|ref|XP_511577.2| PREDICTED: SMAD spec (1009) 1326 316.6 8.9e-84
gi|123241747|emb|CAM16224.1| SMAD specific E3 ubiq ( 735) 1324 316.0 9.5e-84
gi|56407185|gb|AAV87906.1| E3 ubiquitin ligase SMU ( 748) 1324 316.0 9.7e-84
gi|218547425|sp|A2A5Z6.1|SMUF2_MOUSE RecName: Full ( 748) 1324 316.0 9.7e-84
gi|119912571|ref|XP_613331.3| PREDICTED: similar t ( 904) 1324 316.1 1.1e-83
gi|109116811|ref|XP_001109913.1| PREDICTED: simila ( 898) 1320 315.2 2.1e-83
gi|75765918|pdb|1ZVD|A Chain A, Regulation Of Smur ( 380) 1310 312.6 5.4e-83
gi|126308844|ref|XP_001379303.1| PREDICTED: hypoth ( 848) 1311 313.0 8.7e-83
gi|47223927|emb|CAG06104.1| unnamed protein produc ( 734) 1295 309.3   1e-81


>>gi|21739781|emb|CAD38919.1| hypothetical protein [Homo  (295 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1910.3  bits: 361.0 E(): 1.1e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:18-238)

                                10        20        30        40   
mKIAA1                  PDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLL
                        :::::::::::::::::::::::::::::::::::::::::::
gi|217 GGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLL
               10        20        30        40        50        60

            50        60        70        80        90       100   
mKIAA1 GKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 GKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPV
               70        80        90       100       110       120

           110       120       130       140       150       160   
mKIAA1 TEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 TEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKID
              130       140       150       160       170       180

           170       180       190       200       210       220   
mKIAA1 LNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGD 
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
gi|217 LNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAA
              190       200       210       220       230       240

gi|217 GPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEELYEKLLTAVEETCGFAVE
              250       260       270       280       290     

>>gi|26330149|dbj|BAC28813.1| unnamed protein product [M  (355 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1909.2  bits: 361.1 E(): 1.2e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:75-295)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|263 WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
           50        60        70        80        90       100    

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
          110       120       130       140       150       160    

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
          170       180       190       200       210       220    

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
          230       240       250       260       270       280    

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|263 VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
          290       300       310       320       330       340    

>>gi|26381191|dbj|BAB29770.2| unnamed protein product [M  (553 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1906.4  bits: 361.2 E(): 1.8e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:276-496)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|263 WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
         250       260       270       280       290       300     

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
         310       320       330       340       350       360     

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
         370       380       390       400       410       420     

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
         430       440       450       460       470       480     

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|263 VPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE
         490       500       510       520       530       540     

>>gi|119597095|gb|EAW76689.1| SMAD specific E3 ubiquitin  (581 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1906.1  bits: 361.3 E(): 1.8e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:301-521)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|119 WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
              280       290       300       310       320       330

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
              340       350       360       370       380       390

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
              400       410       420       430       440       450

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
              460       470       480       490       500       510

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|119 VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
              520       530       540       550       560       570

>>gi|119597092|gb|EAW76686.1| SMAD specific E3 ubiquitin  (582 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1906.1  bits: 361.3 E(): 1.8e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:302-522)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|119 WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
             280       290       300       310       320       330 

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
             340       350       360       370       380       390 

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
             400       410       420       430       440       450 

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
             460       470       480       490       500       510 

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|119 VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
             520       530       540       550       560       570 

>>gi|148687064|gb|EDL19011.1| SMAD specific E3 ubiquitin  (710 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1904.9  bits: 361.3 E(): 2.1e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:433-653)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|148 WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
            410       420       430       440       450       460  

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
            470       480       490       500       510       520  

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
            530       540       550       560       570       580  

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
            590       600       610       620       630       640  

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|148 VPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE
            650       660       670       680       690       700  

>>gi|3694664|gb|AAC62434.1| similar to NEDD-4 (KIA0093);  (712 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1904.9  bits: 361.3 E(): 2.1e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:432-652)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|369 WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
             410       420       430       440       450       460 

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|369 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
             470       480       490       500       510       520 

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|369 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
             530       540       550       560       570       580 

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|369 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
             590       600       610       620       630       640 

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|369 VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
             650       660       670       680       690       700 

>>gi|6446606|gb|AAF08298.2| E3 ubiquitin ligase SMURF1 [  (722 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1904.8  bits: 361.3 E(): 2.2e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:442-662)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|644 WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
             420       430       440       450       460       470 

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|644 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
             480       490       500       510       520       530 

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|644 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
             540       550       560       570       580       590 

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|644 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
             600       610       620       630       640       650 

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|644 VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
             660       670       680       690       700       710 

>>gi|87044886|ref|NP_083714.3| Smad ubiquitination regul  (728 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1904.7  bits: 361.3 E(): 2.2e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:451-671)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|870 WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
              430       440       450       460       470       480

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|870 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
              490       500       510       520       530       540

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|870 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
              550       560       570       580       590       600

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|870 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
              610       620       630       640       650       660

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|870 VPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE
              670       680       690       700       710       720

>>gi|223460552|gb|AAI36805.1| SMURF1 protein [Homo sapie  (728 aa)
 initn: 1519 init1: 1519 opt: 1519  Z-score: 1904.7  bits: 361.3 E(): 2.2e-97
Smith-Waterman score: 1519;  100.000% identity (100.000% similar) in 221 aa overlap (1-221:451-671)

                                             10        20        30
mKIAA1                               PDSSINPDHLSYFHFVGRIMGLAVFHGHYI
                                     ::::::::::::::::::::::::::::::
gi|223 WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
              430       440       450       460       470       480

               40        50        60        70        80        90
mKIAA1 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|223 NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
              490       500       510       520       530       540

              100       110       120       130       140       150
mKIAA1 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|223 QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
              550       560       570       580       590       600

              160       170       180       190       200       210
mKIAA1 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|223 ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
              610       620       630       640       650       660

              220                                                  
mKIAA1 VPLQGFKALQGD                                                
       :::::::::::                                                 
gi|223 VPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE
              670       680       690       700       710       720




222 residues in 1 query   sequences
2727779818 residues in 7921681 library sequences
 Tcomplib [34.26] (2 proc)
 start: Sun Mar 15 05:02:52 2009 done: Sun Mar 15 05:07:46 2009
 Total Scan time: 698.620 Total Display time:  0.040

Function used was FASTA [version 34.26.5 April 26, 2007]