FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1589.ptfa, 775 aa vs ./tmplib.26680 library 1768242 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.1341+/-0.00461; mu= 21.8569+/- 0.310 mean_var=116.6706+/-26.425, 0's: 0 Z-trim: 15 B-trim: 0 in 0/36 Lambda= 0.1187 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4212 ( 600 res) mbg08227 ( 600) 243 53 1.1e-07 mKIAA1643 ( 950 res) mbh04344 ( 950) 236 52 3.2e-07 mKIAA1537 ( 628 res) mbg18407 ( 628) 232 51 4.2e-07 mKIAA0647 ( 1186 res) mbg01911 (1186) 218 49 3e-06 mKIAA0981 ( 2117 res) mib04069 (2117) 213 49 7.3e-06 mKIAA0993 ( 646 res) mbg00079 ( 646) 192 44 4.9e-05 mKIAA0305 ( 1536 res) mbg08215 (1536) 192 45 7.5e-05 mFLJ00238 ( 1452 res) mfj01101 (1452) 190 45 9.3e-05 mKIAA1362 ( 1407 res) mia41047 (1407) 183 43 0.00021 mKIAA1255 ( 176 res) mbg10338 ( 176) 165 39 0.00064 mKIAA0321 ( 2548 res) mef00119 (2548) 168 41 0.0017 mFLJ00274 ( 1530 res) mpf00869 (1530) 162 40 0.0026 mKIAA1435 ( 411 res) mbp03169 ( 411) 151 37 0.0051 mKIAA4239 ( 1059 res) mfj24184 (1059) 153 38 0.0064 >>mKIAA4212 ( 600 res) mbg08227 (600 aa) initn: 229 init1: 202 opt: 243 Z-score: 230.3 bits: 53.0 E(): 1.1e-07 Smith-Waterman score: 243; 44.928% identity (46.269% ungapped) in 69 aa overlap (701-769:522-588) 680 690 700 710 720 730 mKIAA1 GGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVKL :. : . :. : : ::..:.:.::.. mKIAA4 RKVCEEQEQALQEMGLHLSQSKLKMEDIKEVNKALKGHTWLKDDEATHCKQCEKDFSISR 500 510 520 530 540 550 740 750 760 770 mKIAA1 SKHHCRACGQGFCDECSHDCRAVPSRGWDHPVRVCFNCNKKPGDL ::::: ::. ::. :: . :.:: . .::::: .:. mKIAA4 RKHHCRNCGHIFCNTCSSNELALPS--YPKPVRVCDSCHTLLLQRCSSTAS 560 570 580 590 600 >>mKIAA1643 ( 950 res) mbh04344 (950 aa) initn: 382 init1: 227 opt: 236 Z-score: 222.0 bits: 52.2 E(): 3.2e-07 Smith-Waterman score: 236; 43.939% identity (43.939% ungapped) in 66 aa overlap (703-768:870-935) 680 690 700 710 720 730 mKIAA1 TLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVKLSK : : ::::. : .:. :.: : mKIAA1 QTLRSAALEDCALCQETVSSSELAAKTRDGDFEDPPEWVPDEACGFCTSCKAPFTVIRRK 840 850 860 870 880 890 740 750 760 770 mKIAA1 HHCRACGQGFCDECSHDCRAVPSRGWDHPVRVCFNCNKKPGDL ::::.::. ::..:: .: : .::::: .: mKIAA1 HHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKTGM 900 910 920 930 940 950 >>mKIAA1537 ( 628 res) mbg18407 (628 aa) initn: 220 init1: 191 opt: 232 Z-score: 219.9 bits: 51.2 E(): 4.2e-07 Smith-Waterman score: 232; 35.849% identity (38.776% ungapped) in 106 aa overlap (669-769:514-616) 640 650 660 670 680 690 mKIAA1 VPERGWGPAPVRVCDSCYDARNVQLDVTEADEGGTL--IARKVGEAVQNTLGAVVTAIDI ::. : : .. .:.:. ::. . . mKIAA1 DLQKEKDVLSHLRHETQKVISLKKEFLNLQDENQQLKRIYQEQEQALQE-LGSKLCESKL 490 500 510 520 530 540 700 710 720 730 740 750 mKIAA1 PLGLVKDAARPA---YWVPDHEILHCHNCRKEFSVKLSKHHCRACGQGFCDECSHDCRAV . .:.: . :. :.. ::. :.::::.. ::::: ::. ::. :: . . mKIAA1 KIDDIKEANKALQGLVWLKDKDATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELPL 550 560 570 580 590 600 760 770 mKIAA1 PSRGWDHPVRVCFNCNKKPGDL :: .::::: .:. mKIAA1 PSS--PKPVRVCDSCHAMLIQRCSSNMP 610 620 >>mKIAA0647 ( 1186 res) mbg01911 (1186 aa) initn: 350 init1: 218 opt: 218 Z-score: 204.5 bits: 49.2 E(): 3e-06 Smith-Waterman score: 218; 45.763% identity (45.763% ungapped) in 59 aa overlap (710-768:1102-1160) 680 690 700 710 720 730 mKIAA1 GEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVKLSKHHCRACG ::::: :: :: :: . .:::: :: mKIAA0 TEDFGSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCG 1080 1090 1100 1110 1120 1130 740 750 760 770 mKIAA1 QGFCDECSHDCRAVPSRGWDHPVRVCFNCNKKPGDL . :: : : .:.. :: :: .: mKIAA0 NVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHIQVSRARELMSQHLKKPIATASS 1140 1150 1160 1170 1180 >>mKIAA0981 ( 2117 res) mib04069 (2117 aa) initn: 197 init1: 170 opt: 213 Z-score: 197.7 bits: 48.8 E(): 7.3e-06 Smith-Waterman score: 213; 25.833% identity (29.524% ungapped) in 240 aa overlap (545-770:12-235) 520 530 540 550 560 570 mKIAA1 CGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDAFLKD--NNNAAQRLLDGMNFMAQS- :: .: .. ... .. ::. : . .: mKIAA0 GGGRGGGRPAGPGREAKTHEMATDDKSSPTLDSANDLPRSP 10 20 30 40 580 590 600 610 620 630 mKIAA1 VSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNQCATSFKDNDTKHHCRACGEGFCDS .: : : .: :: : . :.... :. : . . . :: : mKIAA0 ASPSHLTHFKPLTP---DQDEPPFKSAYSSFVNL------FRFNKERGEG-GQGEQQSPS 50 60 70 80 90 640 650 660 670 680 mKIAA1 CSSKTRPVPERGWG---PAPVRV-CDSCYDARNVQLDVTEADE---GGTLIARKVGEAVQ : . .: : . :.: . . :. :: . : :: . ::: mKIAA0 SSWASPQIPSRTQSVRSPVPYKKQLNEELHRRSSVLDSRRKAEPACGG----HDPRTAVQ 100 110 120 130 140 690 700 710 720 730 740 mKIAA1 -NTLGAVVTAI-DIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVKLSKHHCRACGQGF .:..:. . .: : .:. ::.:: . .:..: ..:.. .:::: ::: : mKIAA0 LRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHCRLCGQIF 150 160 170 180 190 200 750 760 770 mKIAA1 CDECSHDCRAVPSR--GWDHPVRVCFNCNKKPGDL :..: . . .:.. :. .:.: : : mKIAA0 CSRCCN--QEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSTCSVSI 210 220 230 240 250 260 >>mKIAA0993 ( 646 res) mbg00079 (646 aa) initn: 218 init1: 192 opt: 192 Z-score: 182.8 bits: 44.3 E(): 4.9e-05 Smith-Waterman score: 209; 32.727% identity (35.644% ungapped) in 110 aa overlap (552-656:525-630) 530 540 550 560 570 580 mKIAA1 RQYWFGNQDPVDTVVRTEIVHVWPGTDAFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTK :::.. :. :.. .. :.. .: .. mKIAA0 RSYSRLKPGYRWERQLVFRSKLTMHTAFDRKDNTHPAEVTALGVS---KDHSRILVGDSR 500 510 520 530 540 550 590 600 610 620 630 mKIAA1 A-VTSW-LTDQI---APAYWRPNSQILSCNQCATSFKDNDTKHHCRACGEGFCDSCSSKT . : :: ..:: : .: . ::. :.. :. .. .:::: ::. ::..:: mKIAA0 GRVFSWSVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLFCQKCSRFQ 560 570 580 590 600 610 640 650 660 670 680 690 mKIAA1 RPVPERGWGPAPVRVCDSCYDARNVQLDVTEADEGGTLIARKVGEAVQNTLGAVVTAIDI . .: .:::::..:: mKIAA0 SEI-KRLKISSPVRVCQNCYYSLQHERGAEDGPRNC 620 630 640 >>mKIAA0305 ( 1536 res) mbg08215 (1536 aa) initn: 195 init1: 171 opt: 192 Z-score: 179.4 bits: 45.0 E(): 7.5e-05 Smith-Waterman score: 192; 39.130% identity (40.909% ungapped) in 69 aa overlap (700-768:731-796) 670 680 690 700 710 720 mKIAA1 EGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVK :: .:. :::: : .: ::. .:. mKIAA0 YIDIESNFEDGSSFVTANKDSLPENKRKESLVLGQKQPT-WVPDSEAPNCMNCQVKFTFT 710 720 730 740 750 730 740 750 760 770 mKIAA1 LSKHHCRACGQGFCDECSHDCRAVPSRGWDHPVRVCFNCNKKPGDL .:::::::. :: : . : . .. .::: : mKIAA0 KRRHHCRACGKVFCGVCCN--RKCKLQYLEKEARVCVICYETINKAQAFERMMSPGGSCL 760 770 780 790 800 810 mKIAA0 KSNHSNECATDQPLQETQTSSTPSPTTLPISALKQPNVEGPCSKEQKRVWFADGILPNGE 820 830 840 850 860 870 >>mFLJ00238 ( 1452 res) mfj01101 (1452 aa) initn: 161 init1: 161 opt: 190 Z-score: 177.8 bits: 44.6 E(): 9.3e-05 Smith-Waterman score: 190; 38.710% identity (40.000% ungapped) in 62 aa overlap (713-774:1147-1206) 690 700 710 720 730 740 mKIAA1 VQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVKLSKHHCRACGQGF : :. :::.:..::: . .:::: ::. : mFLJ00 ELLRDKDALWQKSDALEFQQKLSAEEKCLGDMEVNHCHDCKREFSWIVRRHHCRICGRIF 1120 1130 1140 1150 1160 1170 750 760 770 mKIAA1 CDECSHDCRAVPSRGWDHPVRVCFNCNKKPGDL : : .. .. : . : : : .: :. mFLJ00 CYYCCNNYVVTKPSGKKE--RCCRACFQKFGEGSGSNDSSGSGTSQGEPSPMVSPAEASP 1180 1190 1200 1210 1220 1230 mFLJ00 QSIGSQGINSVCRPPDDAVFDIITDEELCQIQESGSSLPETPTETDSMDPNTAEQDTTSN 1240 1250 1260 1270 1280 1290 >>mKIAA1362 ( 1407 res) mia41047 (1407 aa) initn: 291 init1: 144 opt: 183 Z-score: 171.4 bits: 43.4 E(): 0.00021 Smith-Waterman score: 183; 35.616% identity (40.000% ungapped) in 73 aa overlap (697-768:1188-1253) 670 680 690 700 710 720 mKIAA1 EADEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEF ::: :. :.:: . : : .:: mKIAA1 SSIEEYAKKRITFCPSRSLDEDSERKEEVSPLG-----AKAPIWIPDTRATMCMICTSEF 1160 1170 1180 1190 1200 1210 730 740 750 760 770 mKIAA1 SVKLSKHHCRACGQGFCDECSHDCRAVPS-RGWDHPVRVCFNCNKKPGDL .. .:::::::. :. :: . .. .: . .::: .: mKIAA1 TLTWRRHHCRACGKIVCQACSSNKYGLDYLKG--QLARVCEHCFQELQKLDHQLSPRVGS 1220 1230 1240 1250 1260 1270 mKIAA1 PGNHKSPSSALSSVLHSIPSGRKQKKIPAALKEVSANTEDSTMSGYLYRSKGSKKPWKHL 1280 1290 1300 1310 1320 1330 >>mKIAA1255 ( 176 res) mbg10338 (176 aa) initn: 182 init1: 158 opt: 165 Z-score: 162.7 bits: 38.7 E(): 0.00064 Smith-Waterman score: 183; 31.034% identity (34.615% ungapped) in 116 aa overlap (549-657:58-168) 520 530 540 550 560 570 mKIAA1 YRSRQYWFGNQDPVDTVVRTEIVHVWPGTDAFLKDNNNAAQRLLD-----GMNFMAQSVS :..: : : . .. :.: :.:. mKIAA1 AAAIFDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCRAIVRSGVRLGVN-NNQGVN 30 40 50 60 70 80 580 590 600 610 620 630 mKIAA1 ELSLG-PTKAVTSWLTDQIAPAY-WRPNSQILSCNQCATSFKDNDTKHHCRACGEGFCDS .. :: . : :... : .: .: .:...: . ::::: ::. .: . mKIAA1 IFNYQVATKQLLFRLLDMLSKEPPWCDGS---NCYECTAKFGVTTRKHHCRHCGRLLCHK 90 100 110 120 130 140 640 650 660 670 680 690 mKIAA1 CSSKTRPVPERGWGPAPVRVCDSCYDARNVQLDVTEADEGGTLIARKVGEAVQNTLGAVV ::.: :. . . :::::. :.:. mKIAA1 CSTKEIPIIKFDLNK-PVRVCNICFDVLTLGGVS 150 160 170 775 residues in 1 query sequences 1768242 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:48:57 2006 done: Mon Mar 27 10:48:58 2006 Scan time: 0.870 Display time: 0.250 Function used was FASTA [version 3.4t11 Apr 17, 2002]