# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh04715.fasta.nr -Q ../query/mKIAA1495.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1495, 268 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920329 sequences Expectation_n fit: rho(ln(x))= 5.2515+/-0.000183; mu= 8.8578+/- 0.010 mean_var=72.2839+/-13.855, 0's: 39 Z-trim: 43 B-trim: 15 in 1/67 Lambda= 0.150853 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|123229271|emb|CAM24881.1| leucine-rich repeats ( 452) 1749 389.4 5.6e-106 gi|115527767|gb|AAI25225.1| LRCH2 protein [Homo sa ( 748) 1636 365.0 2.1e-98 gi|148682760|gb|EDL14707.1| mCG67317 [Mus musculus ( 639) 1362 305.3 1.7e-80 gi|211828116|gb|AAH56180.2| Lrch2 protein [Mus mus ( 434) 1154 259.9 5.2e-67 gi|123229272|emb|CAM24882.1| leucine-rich repeats ( 463) 1154 260.0 5.4e-67 gi|116248530|sp|Q3UMG5.2|LRCH2_MOUSE RecName: Full ( 773) 1154 260.1 8.2e-67 gi|123122430|emb|CAM22136.1| leucine-rich repeats ( 783) 1154 260.1 8.3e-67 gi|109510546|ref|XP_001057911.1| PREDICTED: simila ( 656) 1148 258.8 1.8e-66 gi|109510544|ref|XP_346282.3| PREDICTED: similar t ( 772) 1148 258.8 2e-66 gi|194228216|ref|XP_001915811.1| PREDICTED: leucin ( 764) 1137 256.4 1.1e-65 gi|10433455|dbj|BAB13966.1| unnamed protein produc ( 269) 1130 254.6 1.3e-65 gi|194044899|ref|XP_001924728.1| PREDICTED: leucin ( 692) 1133 255.5 1.8e-65 gi|109131969|ref|XP_001102903.1| PREDICTED: simila ( 768) 1133 255.5 1.9e-65 gi|74008142|ref|XP_549199.2| PREDICTED: similar to ( 765) 1132 255.3 2.2e-65 gi|119623023|gb|EAX02618.1| leucine-rich repeats a ( 608) 1130 254.8 2.5e-65 gi|55665661|emb|CAH70721.1| leucine-rich repeats a ( 612) 1130 254.8 2.5e-65 gi|116248529|sp|Q5VUJ6.2|LRCH2_HUMAN RecName: Full ( 765) 1130 254.9 3e-65 gi|133778361|gb|AAI25224.1| LRCH2 protein [Homo sa ( 244) 1123 253.0 3.5e-65 gi|126342698|ref|XP_001364326.1| PREDICTED: simila ( 674) 1116 251.8 2.3e-64 gi|119920154|ref|XP_618181.3| PREDICTED: similar t ( 766) 1111 250.8 5.3e-64 gi|189519257|ref|XP_001921929.1| PREDICTED: leucin ( 245) 1071 241.7 9e-62 gi|148725529|emb|CAN88644.1| novel protein similar ( 213) 1069 241.2 1.1e-61 gi|118089410|ref|XP_420210.2| PREDICTED: similar t ( 751) 1069 241.6 3e-61 gi|224098718|ref|XP_002188455.1| PREDICTED: leucin (1095) 1049 237.4 8.2e-60 gi|89270942|emb|CAJ82074.1| leucine-rich repeats a ( 748) 954 216.6 1e-53 gi|74008144|ref|XP_851476.1| PREDICTED: similar to ( 742) 903 205.5 2.2e-50 gi|109131971|ref|XP_001102804.1| PREDICTED: simila ( 745) 896 204.0 6.3e-50 gi|149049959|gb|EDM02283.1| similar to Leucine-ric ( 675) 780 178.7 2.3e-42 gi|183985874|gb|AAI66585.1| Lrch1 protein [Rattus ( 677) 780 178.7 2.3e-42 gi|74187562|dbj|BAE36728.1| unnamed protein produc ( 256) 767 175.6 7.7e-42 gi|55661729|emb|CAH73643.1| leucine-rich repeats a ( 329) 768 175.9 8.1e-42 gi|62512168|sp|P41737.2|LRCH1_FELCA RecName: Full= ( 251) 766 175.3 8.8e-42 gi|74144471|dbj|BAE36081.1| unnamed protein produc ( 438) 767 175.7 1.2e-41 gi|33126227|gb|AAK95567.1| neuronal protein isofor ( 696) 768 176.1 1.5e-41 gi|158259257|dbj|BAF85587.1| unnamed protein produ ( 696) 768 176.1 1.5e-41 gi|19913480|gb|AAH26097.1| LRCH1 protein [Homo sap ( 323) 763 174.8 1.7e-41 gi|55731334|emb|CAH92381.1| hypothetical protein [ ( 729) 767 175.9 1.8e-41 gi|74180769|dbj|BAE25596.1| unnamed protein produc ( 754) 767 175.9 1.8e-41 gi|148703891|gb|EDL35838.1| mCG121291, isoform CRA ( 796) 767 175.9 1.9e-41 gi|73989286|ref|XP_534123.2| PREDICTED: similar to ( 767) 764 175.2 2.9e-41 gi|74193656|dbj|BAE22780.1| unnamed protein produc ( 579) 756 173.4 7.7e-41 gi|189523516|ref|XP_689376.3| PREDICTED: wu:fb80e0 ( 655) 749 171.9 2.4e-40 gi|90991704|ref|NP_001028611.2| leucine-rich repea ( 709) 720 165.6 2.1e-38 gi|49036032|sp|P62046.1|LRCH1_MOUSE RecName: Full= ( 709) 720 165.6 2.1e-38 gi|118084878|ref|XP_417050.2| PREDICTED: similar t ( 705) 666 153.9 7.1e-35 gi|210085741|gb|EEA34193.1| hypothetical protein B ( 137) 645 148.8 4.6e-34 gi|210124453|gb|EEA72149.1| hypothetical protein B ( 146) 645 148.8 4.9e-34 gi|499184|emb|CAA56129.1| neuronal protein [Felis ( 124) 643 148.4 5.8e-34 gi|47227234|emb|CAG00596.1| unnamed protein produc ( 106) 638 147.2 1.1e-33 gi|194221898|ref|XP_001915067.1| PREDICTED: leucin ( 728) 632 146.5 1.2e-32 >>gi|123229271|emb|CAM24881.1| leucine-rich repeats and (452 aa) initn: 1749 init1: 1749 opt: 1749 Z-score: 2059.0 bits: 389.4 E(): 5.6e-106 Smith-Waterman score: 1749; 99.618% identity (100.000% similar) in 262 aa overlap (7-268:191-452) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEG .::::::::::::::::::::::::::::: gi|123 QLLPEEEDDDLKEVTDLRKIAAQLLKQEQKNRILNHSTSVMRNKLKQTVECEKSVPADEG 170 180 190 200 210 220 40 50 60 70 80 90 mKIAA1 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN 230 240 250 260 270 280 100 110 120 130 140 150 mKIAA1 ENEEEYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRRKMEHLREEREQIRQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ENEEEYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRRKMEHLREEREQIRQLR 290 300 310 320 330 340 160 170 180 190 200 210 mKIAA1 NNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVE 350 360 370 380 390 400 220 230 240 250 260 mKIAA1 NFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSMA :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSMA 410 420 430 440 450 >>gi|115527767|gb|AAI25225.1| LRCH2 protein [Homo sapien (748 aa) initn: 1635 init1: 1635 opt: 1636 Z-score: 1923.0 bits: 365.0 E(): 2.1e-98 Smith-Waterman score: 1636; 93.130% identity (97.710% similar) in 262 aa overlap (7-268:487-748) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEG .::::::::::::: :::::::::: ::: gi|115 QLLAEEEDDDLKEVTDLRKIAAQLLQQEQKNRILNHSTSVMRNKPKQTVECEKSVSADEV 460 470 480 490 500 510 40 50 60 70 80 90 mKIAA1 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN :::::::.::::::::::: .: ::::.:::::.:::::::::::::::::: ::.:::: gi|115 NSPLSPLTWQPLENQKDQIDEQPWPESHPIIWQSEERRRSKQIRKEYFKYKSMRKSSSGN 520 530 540 550 560 570 100 110 120 130 140 150 mKIAA1 ENEEEYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRRKMEHLREEREQIRQLR ::.:::::.:::::.::::::::::::.:::::::::::::::::::::::::::::::: gi|115 ENDEEYDRTDGFSHSPFGLKPRSAFSRSSRQEYGAADPGFTMRRKMEHLREEREQIRQLR 580 590 600 610 620 630 160 170 180 190 200 210 mKIAA1 NNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|115 NNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRKNVE 640 650 660 670 680 690 220 230 240 250 260 mKIAA1 NFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSMA ::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|115 NFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSVA 700 710 720 730 740 >>gi|148682760|gb|EDL14707.1| mCG67317 [Mus musculus] (639 aa) initn: 1361 init1: 748 opt: 1362 Z-score: 1601.7 bits: 305.3 E(): 1.7e-80 Smith-Waterman score: 1480; 84.173% identity (86.331% similar) in 278 aa overlap (8-268:373-639) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEGN .::::::::::::::::::::::::::::: gi|148 THIGSFVSFLKGKEKSSEKSQKNEEPPNEKKILNHSTSVMRNKLKQTVECEKSVPADEGN 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA1 SPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGNE 410 420 430 440 450 460 100 110 120 130 140 mKIAA1 NEE-----------------EYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRR ::: :::::::::::::::::::.. :. . :: . :: gi|148 NEEQESDNAHMSAQSPVSSEEYDRSDGFSHGPFGLKPRSGIF-CIRHAHEEMDPFYLARR 470 480 490 500 510 520 150 160 170 180 190 200 mKIAA1 KMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPS ::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|148 KMEHLRE----------NLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPS 530 540 550 560 570 210 220 230 240 250 260 mKIAA1 PAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTT 580 590 600 610 620 630 mKIAA1 KASQLSMA :::::::: gi|148 KASQLSMA >>gi|211828116|gb|AAH56180.2| Lrch2 protein [Mus musculu (434 aa) initn: 1122 init1: 1122 opt: 1154 Z-score: 1359.4 bits: 259.9 E(): 5.2e-67 Smith-Waterman score: 1572; 91.698% identity (92.453% similar) in 265 aa overlap (21-268:172-434) 10 20 30 40 50 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEGNSPLSPLAWQPLEN ::: : ..::::::::::::::::::::: gi|211 KKVDKEQLLPEEEDDDLKEVTDLRKIAAQLLKQ--EQKNSVPADEGNSPLSPLAWQPLEN 150 160 170 180 190 60 70 80 90 100 mKIAA1 QKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGNENEE---------- :::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 QKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGNENEEQESDNAHMSA 200 210 220 230 240 250 110 120 130 140 150 mKIAA1 -------EYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRRKMEHLREEREQIR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 QSPVSSEEYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRRKMEHLREEREQIR 260 270 280 290 300 310 160 170 180 190 200 210 mKIAA1 QLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 QLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRR 320 330 340 350 360 370 220 230 240 250 260 mKIAA1 NVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSMA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 NVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSMA 380 390 400 410 420 430 >>gi|123229272|emb|CAM24882.1| leucine-rich repeats and (463 aa) initn: 1122 init1: 1122 opt: 1154 Z-score: 1359.0 bits: 260.0 E(): 5.4e-67 Smith-Waterman score: 1572; 91.698% identity (92.453% similar) in 265 aa overlap (21-268:201-463) 10 20 30 40 50 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEGNSPLSPLAWQPLEN ::: : ..::::::::::::::::::::: gi|123 KKVDKEQLLPEEEDDDLKEVTDLRKIAAQLLKQ--EQKNSVPADEGNSPLSPLAWQPLEN 180 190 200 210 220 60 70 80 90 100 mKIAA1 QKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGNENEE---------- :::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGNENEEQESDNAHMSA 230 240 250 260 270 280 110 120 130 140 150 mKIAA1 -------EYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRRKMEHLREEREQIR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QSPVSSEEYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRRKMEHLREEREQIR 290 300 310 320 330 340 160 170 180 190 200 210 mKIAA1 QLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRR 350 360 370 380 390 400 220 230 240 250 260 mKIAA1 NVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSMA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSMA 410 420 430 440 450 460 >>gi|116248530|sp|Q3UMG5.2|LRCH2_MOUSE RecName: Full=Leu (773 aa) initn: 1122 init1: 1122 opt: 1154 Z-score: 1355.8 bits: 260.1 E(): 8.2e-67 Smith-Waterman score: 1705; 93.548% identity (93.907% similar) in 279 aa overlap (7-268:495-773) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEG .::::::::::::::::::::::::::::: gi|116 QLLPEEEDDDLKEVTDLRKIAAQLLKQEQKNRILNHSTSVMRNKLKQTVECEKSVPADEG 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN 530 540 550 560 570 580 100 110 120 130 mKIAA1 ENEE-----------------EYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR :::: ::::::::::::::::::::::::::::::::::::::: gi|116 ENEEQESDNAHMSAQSPVSSEEYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR 590 600 610 620 630 640 140 150 160 170 180 190 mKIAA1 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP 650 660 670 680 690 700 200 210 220 230 240 250 mKIAA1 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT 710 720 730 740 750 760 260 mKIAA1 TKASQLSMA ::::::::: gi|116 TKASQLSMA 770 >>gi|123122430|emb|CAM22136.1| leucine-rich repeats and (783 aa) initn: 1122 init1: 1122 opt: 1154 Z-score: 1355.8 bits: 260.1 E(): 8.3e-67 Smith-Waterman score: 1705; 93.548% identity (93.907% similar) in 279 aa overlap (7-268:505-783) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEG .::::::::::::::::::::::::::::: gi|123 QLLPEEEDDDLKEVTDLRKIAAQLLKQEQKNRILNHSTSVMRNKLKQTVECEKSVPADEG 480 490 500 510 520 530 40 50 60 70 80 90 mKIAA1 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN 540 550 560 570 580 590 100 110 120 130 mKIAA1 ENEE-----------------EYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR :::: ::::::::::::::::::::::::::::::::::::::: gi|123 ENEEQESDNAHMSAQSPVSSEEYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR 600 610 620 630 640 650 140 150 160 170 180 190 mKIAA1 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP 660 670 680 690 700 710 200 210 220 230 240 250 mKIAA1 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT 720 730 740 750 760 770 260 mKIAA1 TKASQLSMA ::::::::: gi|123 TKASQLSMA 780 >>gi|109510546|ref|XP_001057911.1| PREDICTED: similar to (656 aa) initn: 1140 init1: 1118 opt: 1148 Z-score: 1349.8 bits: 258.8 E(): 1.8e-66 Smith-Waterman score: 1690; 92.832% identity (93.548% similar) in 279 aa overlap (7-268:378-656) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEG .:::::::::::::::::::::::: :::: gi|109 EQLLPEEDDDLKEVTDLRKIAAQLLKQEQKNRILNHSTSVMRNKLKQTVECEKSVSADEG 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA1 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN 410 420 430 440 450 460 100 110 120 130 mKIAA1 ENEEE-----------------YDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR ::::. :::::::::::::::::::::::::::::::::::::: gi|109 ENEEQESDNAHMSPQSPVSSEDYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR 470 480 490 500 510 520 140 150 160 170 180 190 mKIAA1 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP 530 540 550 560 570 580 200 210 220 230 240 250 mKIAA1 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT 590 600 610 620 630 640 260 mKIAA1 TKASQLSMA ::::::::: gi|109 TKASQLSMA 650 >>gi|109510544|ref|XP_346282.3| PREDICTED: similar to le (772 aa) initn: 1140 init1: 1118 opt: 1148 Z-score: 1348.8 bits: 258.8 E(): 2e-66 Smith-Waterman score: 1690; 92.832% identity (93.548% similar) in 279 aa overlap (7-268:494-772) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEG .:::::::::::::::::::::::: :::: gi|109 EQLLPEEDDDLKEVTDLRKIAAQLLKQEQKNRILNHSTSVMRNKLKQTVECEKSVSADEG 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN 530 540 550 560 570 580 100 110 120 130 mKIAA1 ENEEE-----------------YDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR ::::. :::::::::::::::::::::::::::::::::::::: gi|109 ENEEQESDNAHMSPQSPVSSEDYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMR 590 600 610 620 630 640 140 150 160 170 180 190 mKIAA1 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVP 650 660 670 680 690 700 200 210 220 230 240 250 mKIAA1 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPT 710 720 730 740 750 760 260 mKIAA1 TKASQLSMA ::::::::: gi|109 TKASQLSMA 770 >>gi|194228216|ref|XP_001915811.1| PREDICTED: leucine-ri (764 aa) initn: 1624 init1: 1107 opt: 1137 Z-score: 1335.9 bits: 256.4 E(): 1.1e-65 Smith-Waterman score: 1588; 87.050% identity (92.086% similar) in 278 aa overlap (7-268:487-764) 10 20 30 mKIAA1 SLCRFTSRILNHSTSVMRNKLKQTVECEKSVPADEG .::::.:::: ::: ::..:::::. ::: gi|194 QLLAEEEDDDLKEVTDLRKIAAQLLQQEQKNRILNRSTSVTRNKPKQAAECEKSISADEV 460 470 480 490 500 510 40 50 60 70 80 90 mKIAA1 NSPLSPLAWQPLENQKDQIVDQQWPESQPIIWQNEERRRSKQIRKEYFKYKSTRKNSSGN :::::::.::::::::::: .::::::::::::.:::::::::::.::::::.::.:::: gi|194 NSPLSPLTWQPLENQKDQIDEQQWPESQPIIWQSEERRRSKQIRKDYFKYKSSRKSSSGN 520 530 540 550 560 570 100 110 120 130 140 mKIAA1 ENEE----------------EYDRSDGFSHGPFGLKPRSAFSRASRQEYGAADPGFTMRR ::.: ::::.::::::::::::::::::.:::::::::::::::: gi|194 ENDEQDSDNANMSPQSPVSEEYDRTDGFSHGPFGLKPRSAFSRSSRQEYGAADPGFTMRR 580 590 600 610 620 630 150 160 170 180 190 200 mKIAA1 KMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPS 640 650 660 670 680 690 210 220 230 240 250 260 mKIAA1 PAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTT 700 710 720 730 740 750 mKIAA1 KASQLSMA :::::: : gi|194 KASQLSTA 760 268 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 13:36:59 2009 done: Sat Mar 14 13:42:24 2009 Total Scan time: 759.270 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]