# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh04493.fasta.nr -Q ../query/mKIAA0451.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0451, 344 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918642 sequences Expectation_n fit: rho(ln(x))= 5.7943+/-0.000194; mu= 7.5047+/- 0.011 mean_var=95.0637+/-18.351, 0's: 43 Z-trim: 49 B-trim: 676 in 2/64 Lambda= 0.131543 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|187956888|gb|AAI58018.1| Cdc42bpa protein [Mus (1732) 2325 451.6 5.3e-124 gi|94364575|ref|XP_996273.1| PREDICTED: Cdc42 bind (1638) 2316 449.9 1.7e-123 gi|134034172|sp|Q3UU96.2|MRCKA_MOUSE RecName: Full (1719) 2316 449.9 1.7e-123 gi|94364571|ref|XP_996292.1| PREDICTED: Cdc42 bind (1732) 2316 449.9 1.7e-123 gi|94364569|ref|XP_996370.1| PREDICTED: Cdc42 bind (1735) 2316 449.9 1.7e-123 gi|94364647|ref|XP_981011.1| PREDICTED: similar to (1754) 2298 446.5 1.9e-122 gi|94364645|ref|XP_980946.1| PREDICTED: similar to (1758) 2298 446.5 1.9e-122 gi|81174934|sp|O54874.1|MRCKA_RAT RecName: Full=Se (1732) 2273 441.8 4.9e-121 gi|149040859|gb|EDL94816.1| CDC42 binding protein (1732) 2273 441.8 4.9e-121 gi|57997577|emb|CAI45998.1| hypothetical protein [ (1018) 2246 436.4 1.1e-119 gi|58036943|emb|CAI46252.1| hypothetical protein [ (1047) 2246 436.5 1.2e-119 gi|119590215|gb|EAW69809.1| CDC42 binding protein (1637) 2246 436.6 1.6e-119 gi|29373942|emb|CAD57746.1| CDC42 binding protein (1638) 2246 436.6 1.6e-119 gi|27261723|gb|AAN86031.1| CDC42-binding protein k (1638) 2246 436.6 1.6e-119 gi|168275870|dbj|BAG10655.1| serine/threonine-prot (1691) 2246 436.6 1.7e-119 gi|223462007|gb|AAI36334.1| Unknown (protein for M (1699) 2246 436.6 1.7e-119 gi|62087516|dbj|BAD92205.1| CDC42 binding protein (1702) 2246 436.6 1.7e-119 gi|119590212|gb|EAW69806.1| CDC42 binding protein (1718) 2246 436.6 1.7e-119 gi|29373940|emb|CAD57745.1| CDC42 binding protein (1719) 2246 436.6 1.7e-119 gi|56206219|emb|CAI19113.1| CDC42 binding protein (1047) 2241 435.5 2.3e-119 gi|55665002|emb|CAH71184.1| CDC42 binding protein (1638) 2241 435.7 3.2e-119 gi|55665001|emb|CAH71183.1| CDC42 binding protein (1719) 2241 435.7 3.3e-119 gi|74746874|sp|Q5VT25.1|MRCKA_HUMAN RecName: Full= (1732) 2241 435.7 3.3e-119 gi|119908233|ref|XP_618596.3| PREDICTED: similar t (1719) 2238 435.1 4.9e-119 gi|73960795|ref|XP_863576.1| PREDICTED: similar to (1638) 2237 434.9 5.4e-119 gi|73960791|ref|XP_863529.1| PREDICTED: similar to (1654) 2237 434.9 5.4e-119 gi|73960801|ref|XP_863642.1| PREDICTED: similar to (1691) 2237 434.9 5.5e-119 gi|149748805|ref|XP_001490094.1| PREDICTED: CDC42 (1719) 2237 434.9 5.6e-119 gi|73960803|ref|XP_863666.1| PREDICTED: similar to (1719) 2237 434.9 5.6e-119 gi|73960797|ref|XP_863599.1| PREDICTED: similar to (1728) 2237 434.9 5.6e-119 gi|73960807|ref|XP_851425.1| PREDICTED: similar to (1732) 2237 434.9 5.6e-119 gi|73960805|ref|XP_537229.2| PREDICTED: similar to (1754) 2237 434.9 5.7e-119 gi|73960793|ref|XP_863552.1| PREDICTED: similar to (1774) 2237 434.9 5.7e-119 gi|126306938|ref|XP_001368419.1| PREDICTED: simila (1637) 2109 410.6 1.1e-111 gi|126306936|ref|XP_001368382.1| PREDICTED: simila (1718) 2109 410.6 1.1e-111 gi|118087693|ref|XP_001231343.1| PREDICTED: simila (1637) 2102 409.3 2.8e-111 gi|118087689|ref|XP_415041.2| PREDICTED: similar t (1718) 2102 409.3 2.9e-111 gi|118087687|ref|XP_001231233.1| PREDICTED: simila (1731) 2102 409.3 2.9e-111 gi|118087691|ref|XP_001231317.1| PREDICTED: simila (1747) 2102 409.3 2.9e-111 gi|224047287|ref|XP_002194942.1| PREDICTED: simila (1731) 2101 409.1 3.3e-111 gi|149641639|ref|XP_001513203.1| PREDICTED: simila (1718) 2070 403.2 1.9e-109 gi|55251365|emb|CAH68979.1| novel protein similar (1716) 1788 349.7 2.5e-93 gi|66794541|gb|AAH96679.1| Cdc42bpa protein [Mus m ( 269) 1744 340.7 2e-91 gi|189530631|ref|XP_696317.3| PREDICTED: similar t (1716) 1740 340.6 1.4e-90 gi|10440001|dbj|BAB15619.1| unnamed protein produc ( 297) 1623 317.8 1.7e-84 gi|67971766|dbj|BAE02225.1| unnamed protein produc ( 503) 1623 318.0 2.6e-84 gi|56206213|emb|CAI19107.1| CDC42 binding protein ( 545) 1623 318.0 2.8e-84 gi|56206218|emb|CAI19112.1| CDC42 binding protein ( 983) 1469 289.0 2.7e-75 gi|109018017|ref|XP_001088134.1| PREDICTED: simila (1781) 1469 289.2 4.3e-75 gi|73960799|ref|XP_863624.1| PREDICTED: similar to (1781) 1461 287.7 1.2e-74 >>gi|187956888|gb|AAI58018.1| Cdc42bpa protein [Mus musc (1732 aa) initn: 2325 init1: 2325 opt: 2325 Z-score: 2382.6 bits: 451.6 E(): 5.3e-124 Smith-Waterman score: 2325; 100.000% identity (100.000% similar) in 344 aa overlap (1-344:1389-1732) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :::::::::::::::::::::::::::::: gi|187 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEI 1360 1370 1380 1390 1400 1410 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 1420 1430 1440 1450 1460 1470 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 1480 1490 1500 1510 1520 1530 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1540 1550 1560 1570 1580 1590 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1600 1610 1620 1630 1640 1650 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK 1660 1670 1680 1690 1700 1710 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|187 SLSLESTDRGSWDP 1720 1730 >>gi|94364575|ref|XP_996273.1| PREDICTED: Cdc42 binding (1638 aa) initn: 2316 init1: 2316 opt: 2316 Z-score: 2373.7 bits: 449.9 E(): 1.7e-123 Smith-Waterman score: 2316; 99.709% identity (99.709% similar) in 344 aa overlap (1-344:1295-1638) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :::::::::::::::::::::::::::::: gi|943 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEI 1270 1280 1290 1300 1310 1320 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 1330 1340 1350 1360 1370 1380 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 1390 1400 1410 1420 1430 1440 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1450 1460 1470 1480 1490 1500 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|943 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1510 1520 1530 1540 1550 1560 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK 1570 1580 1590 1600 1610 1620 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|943 SLSLESTDRGSWDP 1630 >>gi|134034172|sp|Q3UU96.2|MRCKA_MOUSE RecName: Full=Ser (1719 aa) initn: 2316 init1: 2316 opt: 2316 Z-score: 2373.4 bits: 449.9 E(): 1.7e-123 Smith-Waterman score: 2316; 99.709% identity (99.709% similar) in 344 aa overlap (1-344:1376-1719) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :::::::::::::::::::::::::::::: gi|134 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEI 1350 1360 1370 1380 1390 1400 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 1410 1420 1430 1440 1450 1460 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 1470 1480 1490 1500 1510 1520 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1530 1540 1550 1560 1570 1580 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|134 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1590 1600 1610 1620 1630 1640 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK 1650 1660 1670 1680 1690 1700 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|134 SLSLESTDRGSWDP 1710 >>gi|94364571|ref|XP_996292.1| PREDICTED: Cdc42 binding (1732 aa) initn: 2316 init1: 2316 opt: 2316 Z-score: 2373.4 bits: 449.9 E(): 1.7e-123 Smith-Waterman score: 2316; 99.709% identity (99.709% similar) in 344 aa overlap (1-344:1389-1732) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :::::::::::::::::::::::::::::: gi|943 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEI 1360 1370 1380 1390 1400 1410 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 1420 1430 1440 1450 1460 1470 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 1480 1490 1500 1510 1520 1530 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1540 1550 1560 1570 1580 1590 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|943 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1600 1610 1620 1630 1640 1650 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK 1660 1670 1680 1690 1700 1710 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|943 SLSLESTDRGSWDP 1720 1730 >>gi|94364569|ref|XP_996370.1| PREDICTED: Cdc42 binding (1735 aa) initn: 2316 init1: 2316 opt: 2316 Z-score: 2373.3 bits: 449.9 E(): 1.7e-123 Smith-Waterman score: 2316; 99.709% identity (99.709% similar) in 344 aa overlap (1-344:1392-1735) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :::::::::::::::::::::::::::::: gi|943 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEI 1370 1380 1390 1400 1410 1420 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 1430 1440 1450 1460 1470 1480 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 1490 1500 1510 1520 1530 1540 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1550 1560 1570 1580 1590 1600 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|943 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1610 1620 1630 1640 1650 1660 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK 1670 1680 1690 1700 1710 1720 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|943 SLSLESTDRGSWDP 1730 >>gi|94364647|ref|XP_981011.1| PREDICTED: similar to myt (1754 aa) initn: 1425 init1: 1425 opt: 2298 Z-score: 2354.8 bits: 446.5 E(): 1.9e-122 Smith-Waterman score: 2298; 99.419% identity (99.419% similar) in 344 aa overlap (1-344:1412-1754) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :::::::::::::::::::::::::::::: gi|943 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEI 1390 1400 1410 1420 1430 1440 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 1450 1460 1470 1480 1490 1500 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|943 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMA-GDELVVPETSDNSRKQMVRNI 1510 1520 1530 1540 1550 1560 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1570 1580 1590 1600 1610 1620 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|943 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1630 1640 1650 1660 1670 1680 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK 1690 1700 1710 1720 1730 1740 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|943 SLSLESTDRGSWDP 1750 >>gi|94364645|ref|XP_980946.1| PREDICTED: similar to myt (1758 aa) initn: 1425 init1: 1425 opt: 2298 Z-score: 2354.8 bits: 446.5 E(): 1.9e-122 Smith-Waterman score: 2298; 99.419% identity (99.419% similar) in 344 aa overlap (1-344:1416-1758) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :::::::::::::::::::::::::::::: gi|943 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEI 1390 1400 1410 1420 1430 1440 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 1450 1460 1470 1480 1490 1500 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|943 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMA-GDELVVPETSDNSRKQMVRNI 1510 1520 1530 1540 1550 1560 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1570 1580 1590 1600 1610 1620 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|943 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1630 1640 1650 1660 1670 1680 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK 1690 1700 1710 1720 1730 1740 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|943 SLSLESTDRGSWDP 1750 >>gi|81174934|sp|O54874.1|MRCKA_RAT RecName: Full=Serine (1732 aa) initn: 2273 init1: 2273 opt: 2273 Z-score: 2329.3 bits: 441.8 E(): 4.9e-121 Smith-Waterman score: 2273; 96.802% identity (99.709% similar) in 344 aa overlap (1-344:1389-1732) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :.::::::::::::.::.::::::.::::: gi|811 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGSPCNMLHSNDHTLAFITHQPMDAICAVEI 1360 1370 1380 1390 1400 1410 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::.:::::::::::::::::::::::::::::::::::.:::::::::::::: gi|811 SNKEYLLCFSSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSIYSENAVDIFDVNSM 1420 1430 1440 1450 1460 1470 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 1480 1490 1500 1510 1520 1530 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1540 1550 1560 1570 1580 1590 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|811 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1600 1610 1620 1630 1640 1650 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK ::::::::::::::::.:::::::.::::::::::::::::::::::::::::.::.::: gi|811 RQPMPSPSEGSLSSGGVDQGSDAPVRDYDGEDSDSPRHSTASNSSNLSSPPSPVSPRKTK 1660 1670 1680 1690 1700 1710 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|811 SLSLESTDRGSWDP 1720 1730 >>gi|149040859|gb|EDL94816.1| CDC42 binding protein kina (1732 aa) initn: 2273 init1: 2273 opt: 2273 Z-score: 2329.3 bits: 441.8 E(): 4.9e-121 Smith-Waterman score: 2273; 96.802% identity (99.709% similar) in 344 aa overlap (1-344:1389-1732) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :.::::::::::::.::.::::::.::::: gi|149 PCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGSPCNMLHSNDHTLAFITHQPMDAICAVEI 1360 1370 1380 1390 1400 1410 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :::::::::.:::::::::::::::::::::::::::::::::::.:::::::::::::: gi|149 SNKEYLLCFSSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSIYSENAVDIFDVNSM 1420 1430 1440 1450 1460 1470 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 1480 1490 1500 1510 1520 1530 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 1540 1550 1560 1570 1580 1590 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|149 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTK 1600 1610 1620 1630 1640 1650 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK ::::::::::::::::.:::::::.::::::::::::::::::::::::::::.::.::: gi|149 RQPMPSPSEGSLSSGGVDQGSDAPVRDYDGEDSDSPRHSTASNSSNLSSPPSPVSPRKTK 1660 1670 1680 1690 1700 1710 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|149 SLSLESTDRGSWDP 1720 1730 >>gi|57997577|emb|CAI45998.1| hypothetical protein [Homo (1018 aa) initn: 2246 init1: 2246 opt: 2246 Z-score: 2304.7 bits: 436.4 E(): 1.1e-119 Smith-Waterman score: 2246; 96.221% identity (99.419% similar) in 344 aa overlap (1-344:675-1018) 10 20 30 mKIAA0 GGPCNMLHSNDHTLSFISHQPMDALCAVEI :.: .::::::::::::.::::::.::::: gi|579 PYNVQWMAIFSEQLCVGFQSGFLRYPLNGEGNPYSMLHSNDHTLSFIAHQPMDAICAVEI 650 660 670 680 690 700 40 50 60 70 80 90 mKIAA0 SNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 SSKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSM 710 720 730 740 750 760 100 110 120 130 140 150 mKIAA0 EWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|579 EWIQTLPLKKVRPLNNEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNI 770 780 790 800 810 820 160 170 180 190 200 210 mKIAA0 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 NNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMN 830 840 850 860 870 880 220 230 240 250 260 270 mKIAA0 PRPQESRTVFSGSVSIPSITKSRPEPVRSMSASSGLSARSSAQNGSALKREFSGGSYNTK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::..: gi|579 PRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYSAK 890 900 910 920 930 940 280 290 300 310 320 330 mKIAA0 RQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTK :::::::::::::::::::::::::::.:::::::::::::::::::::::::.::.::: gi|579 RQPMPSPSEGSLSSGGMDQGSDAPARDFDGEDSDSPRHSTASNSSNLSSPPSPVSPRKTK 950 960 970 980 990 1000 340 mKIAA0 SLSLESTDRGSWDP :::::::::::::: gi|579 SLSLESTDRGSWDP 1010 344 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 18:46:35 2009 done: Sat Mar 14 18:52:29 2009 Total Scan time: 815.360 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]