# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh04492.fasta.nr -Q ../query/mKIAA0849.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0849, 999 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7919696 sequences
Expectation_n fit: rho(ln(x))= 5.4752+/-0.000187; mu= 12.8292+/- 0.010
mean_var=81.8577+/-15.722, 0's: 36 Z-trim: 44 B-trim: 2 in 1/66
Lambda= 0.141757
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 39, opt: 27, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|51315948|sp|Q80TQ2.2|CYLD_MOUSE RecName: Full=P ( 952) 6469 1333.4 0
gi|74225689|dbj|BAE21677.1| unnamed protein produc ( 952) 6457 1330.9 0
gi|189491653|ref|NP_001121641.1| ubiquitin carboxy ( 955) 6453 1330.1 0
gi|81884163|sp|Q66H62.1|CYLD_RAT RecName: Full=Pro ( 953) 6415 1322.3 0
gi|109508462|ref|XP_001063048.1| PREDICTED: simila ( 956) 6399 1319.1 0
gi|149699064|ref|XP_001489497.1| PREDICTED: cylind ( 953) 6212 1280.8 0
gi|73950396|ref|XP_854436.1| PREDICTED: similar to ( 956) 6194 1277.1 0
gi|122134589|sp|Q1RMU2.1|CYLD_BOVIN RecName: Full= ( 953) 6163 1270.8 0
gi|158259411|dbj|BAF85664.1| unnamed protein produ ( 953) 6161 1270.4 0
gi|51316104|sp|Q9NQC7.1|CYLD_HUMAN RecName: Full=P ( 956) 6152 1268.5 0
gi|75042495|sp|Q5RED8.1|CYLD_PONAB RecName: Full=P ( 956) 6144 1266.9 0
gi|126296089|ref|XP_001363674.1| PREDICTED: simila ( 953) 5984 1234.2 0
gi|126296086|ref|XP_001363603.1| PREDICTED: simila ( 956) 5968 1230.9 0
gi|118096300|ref|XP_414091.2| PREDICTED: similar t ( 954) 5700 1176.1 0
gi|118096302|ref|XP_001233097.1| PREDICTED: simila ( 957) 5666 1169.2 0
gi|224064322|ref|XP_002194115.1| PREDICTED: cylind ( 951) 5463 1127.6 0
gi|193786510|dbj|BAG51293.1| unnamed protein produ ( 731) 4738 979.3 0
gi|189521364|ref|XP_684817.3| PREDICTED: cylindrom ( 951) 4418 913.9 0
gi|119603178|gb|EAW82772.1| cylindromatosis (turba ( 635) 4133 855.5 0
gi|26333009|dbj|BAC30222.1| unnamed protein produc ( 623) 4132 855.3 0
gi|109508466|ref|XP_001062983.1| PREDICTED: simila ( 917) 3966 821.5 0
gi|109507817|ref|XP_001058247.1| PREDICTED: simila ( 566) 3884 804.5 0
gi|224064324|ref|XP_002194185.1| PREDICTED: cylind ( 961) 3740 775.3 0
gi|169642646|gb|AAI60532.1| Cyld protein [Xenopus ( 974) 3469 719.8 1.6e-204
gi|6841352|gb|AAF29029.1|AF161542_1 HSPC057 [Homo ( 515) 3092 642.5 1.5e-181
gi|193785836|dbj|BAG51271.1| unnamed protein produ ( 476) 2826 588.1 3.4e-165
gi|74195384|dbj|BAE39512.1| unnamed protein produc ( 770) 2720 566.6 1.7e-158
gi|169791723|pdb|2VHF|A Chain A, Structure Of The ( 374) 2544 530.4 6.5e-148
gi|29612550|gb|AAH49879.1| Cyld protein [Mus muscu ( 313) 2198 459.5 1.1e-126
gi|26335313|dbj|BAC31357.1| unnamed protein produc ( 318) 2026 424.4 4.5e-116
gi|74148016|dbj|BAE22340.1| unnamed protein produc ( 256) 1834 385.0 2.5e-104
gi|210099456|gb|EEA47549.1| hypothetical protein B ( 872) 1607 339.0 6.1e-90
gi|212516288|gb|EEB18321.1| 40S ribosomal protein ( 610) 1555 328.3 7.4e-87
gi|156226486|gb|EDO47295.1| predicted protein [Nem ( 482) 1541 325.3 4.5e-86
gi|194148842|gb|EDW64540.1| GJ17519 [Drosophila vi ( 679) 1537 324.6 1e-85
gi|66519699|ref|XP_393824.2| PREDICTED: similar to ( 544) 1530 323.1 2.3e-85
gi|194106332|gb|EDW28375.1| GL18982 [Drosophila pe ( 551) 1516 320.3 1.7e-84
gi|118087443|ref|XP_418407.2| PREDICTED: hypotheti ( 528) 1508 318.6 5.2e-84
gi|193900016|gb|EDV98882.1| GH13356 [Drosophila gr ( 618) 1506 318.2 7.7e-84
gi|194175171|gb|EDW88782.1| GE26174 [Drosophila ya ( 640) 1489 314.8 8.8e-83
gi|189237579|ref|XP_001816010.1| PREDICTED: simila ( 544) 1483 313.5 1.8e-82
gi|190616777|gb|EDV32301.1| GF14119 [Drosophila an ( 642) 1480 312.9 3.2e-82
gi|22946130|gb|AAN10741.1| CYLD, isoform B [Drosop ( 551) 1479 312.7 3.3e-82
gi|194190916|gb|EDX04492.1| GD22283 [Drosophila si ( 639) 1479 312.7 3.6e-82
gi|194130350|gb|EDW52393.1| GM11823 [Drosophila se ( 639) 1479 312.7 3.6e-82
gi|22946129|gb|AAN10740.1| CYLD, isoform C [Drosop ( 550) 1478 312.5 3.7e-82
gi|22946127|gb|AAN10738.1| CYLD, isoform D [Drosop ( 639) 1478 312.5 4.2e-82
gi|17946360|gb|AAL49214.1| RE64280p [Drosophila me ( 639) 1474 311.7 7.4e-82
gi|194165384|gb|EDW80285.1| GK18789 [Drosophila wi ( 577) 1472 311.3 9.1e-82
gi|190661306|gb|EDV58498.1| GG23954 [Drosophila er ( 640) 1469 310.7 1.5e-81
>>gi|51315948|sp|Q80TQ2.2|CYLD_MOUSE RecName: Full=Proba (952 aa)
initn: 6469 init1: 6469 opt: 6469 Z-score: 7144.3 bits: 1333.4 E(): 0
Smith-Waterman score: 6469; 100.000% identity (100.000% similar) in 952 aa overlap (48-999:1-952)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::::::::::::::
gi|513 MSSGLWSQEKVTSPYWEERIFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQSKSKNPWYIDEVAEDPAKSLTEMSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQSKSKNPWYIDEVAEDPAKSLTEMSSD
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 FGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 FGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTPV
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 QESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 QESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGCT
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 DGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 DGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEEN
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 TPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 TPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYYS
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 ETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 ETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDIL
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 RVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 RVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLII
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 QMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 QMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKIK
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 QFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 QFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYVA
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 FVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 FVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGC
880 890 900 910 920 930
980 990
mKIAA0 ARRLLCDAYMCMYQSPTMSLYK
::::::::::::::::::::::
gi|513 ARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|74225689|dbj|BAE21677.1| unnamed protein product [M (952 aa)
initn: 6457 init1: 6457 opt: 6457 Z-score: 7131.1 bits: 1330.9 E(): 0
Smith-Waterman score: 6457; 99.895% identity (99.895% similar) in 952 aa overlap (48-999:1-952)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::::::::::::::
gi|742 MSSGLWSQEKVTSPYWEERIFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQSKSKNPWYIDEVAEDPAKSLTEMSSD
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
gi|742 HNKPKVTGSTSDHGSRNRSELFYTLNGSSVDSQQSKSKNPWYIDEVAEDPAKSLTEMSSD
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 FGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 FGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTPV
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 QESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 QESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGCT
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 DGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 DGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEEN
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 TPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 TPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYYS
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 ETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 ETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDIL
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 RVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 RVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLII
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 QMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 QMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKIK
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 QFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 QFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYVA
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 FVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 FVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGC
880 890 900 910 920 930
980 990
mKIAA0 ARRLLCDAYMCMYQSPTMSLYK
::::::::::::::::::::::
gi|742 ARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|189491653|ref|NP_001121641.1| ubiquitin carboxyl-te (955 aa)
initn: 4445 init1: 4445 opt: 6453 Z-score: 7126.6 bits: 1330.1 E(): 0
Smith-Waterman score: 6453; 99.686% identity (99.686% similar) in 955 aa overlap (48-999:1-955)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::::::::::::::
gi|189 MSSGLWSQEKVTSPYWEERIFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIP---DSVTQERRPPKLAFMSRGVGDKG
:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
gi|189 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPALSDSVTQERRPPKLAFMSRGVGDKG
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 SSSHNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQSKSKNPWYIDEVAEDPAKSLTEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 SSSHNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQSKSKNPWYIDEVAEDPAKSLTEM
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 SSDFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 SSDFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNS
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 TPVQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 TPVQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECA
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 GCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 GCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVV
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 EENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 EENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIE
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 YYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 YYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFH
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 DILRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 DILRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSC
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 LIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 LIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAG
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 KIKQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 KIKQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSH
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 YVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 YVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRI
880 890 900 910 920 930
980 990
mKIAA0 QGCARRLLCDAYMCMYQSPTMSLYK
:::::::::::::::::::::::::
gi|189 QGCARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|81884163|sp|Q66H62.1|CYLD_RAT RecName: Full=Probabl (953 aa)
initn: 4050 init1: 4050 opt: 6415 Z-score: 7084.6 bits: 1322.3 E(): 0
Smith-Waterman score: 6415; 98.636% identity (99.790% similar) in 953 aa overlap (48-999:1-953)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::.::::::::::::.::::::::::
gi|818 MSSGLWNQEKVTSPYWEERLFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
:::::::::.::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|818 TDKQTQKLLRVPKGSIGQYIQDRSVGHSRVPSAKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
::::::::::::::::::::::::::.::::::::::::::.::::::::::::::::::
gi|818 EINEKFTELLLAITNCEERLSLFRNRIRLSKGLQVDVGSPVRVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|818 GLESDFAGPGDTVQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|818 NPIGNWDGRFDGVQLCSFASVESTVLLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQ-SKSKNPWYIDEVAEDPAKSLTEMSS
:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
gi|818 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQQSKSKNPWYIDEVAEDPAKSLTEMSS
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 DFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 DFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTP
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 VQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGC
::::::.: :::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 VQESPPMPSSSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGC
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 NTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
gi|818 NTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDVEYY
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDI
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 LRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 LRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLI
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 KQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYV
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
gi|818 KQFCKTCSTQVHLHPRRLNHTYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYV
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 AFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 AFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQG
880 890 900 910 920 930
980 990
mKIAA0 CARRLLCDAYMCMYQSPTMSLYK
:::::::::::::::::::::::
gi|818 CARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|109508462|ref|XP_001063048.1| PREDICTED: similar to (956 aa)
initn: 6033 init1: 4050 opt: 6399 Z-score: 7066.9 bits: 1319.1 E(): 0
Smith-Waterman score: 6399; 98.326% identity (99.477% similar) in 956 aa overlap (48-999:1-956)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::.::::::::::::.::::::::::
gi|109 MSSGLWNQEKVTSPYWEERLFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
:::::::::.::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|109 TDKQTQKLLRVPKGSIGQYIQDRSVGHSRVPSAKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
::::::::::::::::::::::::::.::::::::::::::.::::::::::::::::::
gi|109 EINEKFTELLLAITNCEERLSLFRNRIRLSKGLQVDVGSPVRVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|109 GLESDFAGPGDTVQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIP---DSVTQERRPPKLAFMSRGVGDKG
::::::::::::::::::::::::.::::::::: :::::::::::::::::::::::
gi|109 NPIGNWDGRFDGVQLCSFASVESTVLLHINDIIPALSDSVTQERRPPKLAFMSRGVGDKG
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 SSSHNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQ-SKSKNPWYIDEVAEDPAKSLTE
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|109 SSSHNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQQQSKSKNPWYIDEVAEDPAKSLTE
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 MSSDFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 MSSDFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELN
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 STPVQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDEC
:::::::::.: ::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 STPVQESPPMPSSSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDEC
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 AGCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 AGCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEV
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 VEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|109 VEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDV
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 EYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 EYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILF
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 HDILRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 HDILRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPS
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 CLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 CLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISA
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 GKIKQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETS
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
gi|109 GKIKQFCKTCSTQVHLHPRRLNHTYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETS
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 HYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 HYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRR
880 890 900 910 920 930
980 990
mKIAA0 IQGCARRLLCDAYMCMYQSPTMSLYK
::::::::::::::::::::::::::
gi|109 IQGCARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|149699064|ref|XP_001489497.1| PREDICTED: cylindroma (953 aa)
initn: 6210 init1: 3926 opt: 6212 Z-score: 6860.3 bits: 1280.8 E(): 0
Smith-Waterman score: 6212; 95.383% identity (98.531% similar) in 953 aa overlap (48-999:1-953)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::: ::::::::::
gi|149 MSSGLWSQEKVTSPYWEERSFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
:::::::::::::::::::::::::::::.::.:.:::::::::::::::::::::::::
gi|149 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRIPSAKAKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
:::::::::::::::::::.:::.:: :::::::.::: :::::::::::::::::::::
gi|149 EINEKFTELLLAITNCEERFSLFKNRNRLSKGLQIDVGCPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
:::::::.::::::::::.::::::::::::::::::::::::::::::::::.::::::
gi|149 PLLAERTISGIFFGVELLDEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLEIIEDDDN
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
:::::.::: :::::: ::::::::::::.::. ::::::::::::::::::::::::::
gi|149 GLESDYAGPVDTMQVELPPLEINSRVSLKLGETIESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
gi|149 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFTSRGVGDKGSSS
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQ-QSKSKNPWYIDEVAEDPAKSLTEMSS
:::::.::::::::.:::::::::::::::::: :::::: ::::::::::::::::.:
gi|149 HNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDPAKSLTEISP
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 DFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTP
::::.::: ::::::::::::::::::::::::::::::..::::::::::::::::..:
gi|149 DFGHASPPLQPPSMNSLSSENRFHSLPFSLTKMPNTNGSIGHSPLSLSVQSVMGELNNAP
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 VQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGC
::::::: .::::.::::::::::::::::::::::::::::::..::::::::::::::
gi|149 VQESPPLAVSSGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGC
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 NTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYY
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::.:::
gi|149 NTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYY
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
gi|149 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHHI
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 LRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLI
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
gi|149 LRVEPLLKIRSAGQKVQDCYFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLI
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 KQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYV
:::::::.:::::::.::::.:.:::::::::::::::::::::::::::::::::::::
gi|149 KQFCKTCNTQVHLHPKRLNHQYNPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYV
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 AFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 AFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQG
880 890 900 910 920 930
980 990
mKIAA0 CARRLLCDAYMCMYQSPTMSLYK
:::::::::::::::::::::::
gi|149 CARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|73950396|ref|XP_854436.1| PREDICTED: similar to cyl (956 aa)
initn: 5830 init1: 3895 opt: 6194 Z-score: 6840.4 bits: 1277.1 E(): 0
Smith-Waterman score: 6194; 94.770% identity (98.431% similar) in 956 aa overlap (48-999:1-956)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::::::::::::::
gi|739 MSSGLWSQEKVTSPYWEERIFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
:::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::::
gi|739 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRIPSAKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
:::::::::::::::::::.:::.:. :::::::.::: :::::::::::::::::::::
gi|739 EINEKFTELLLAITNCEERFSLFKNKNRLSKGLQIDVGCPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
:::::::::::::::::::::::::::::.:::::::::::::::::::::::..:::::
gi|739 PLLAERTVSGIFFGVELLEEGRGQGFTDGIYQGKQLFQCDEDCGVFVALDKLEILEDDDN
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
:::::.::::::::.: ::::::::::::.::. ::::::::::::::::::::::::::
gi|739 GLESDYAGPGDTMQMELPPLEINSRVSLKLGETIESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIP---DSVTQERRPPKLAFMSRGVGDKG
:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
gi|739 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPALSDSVTQERRPPKLAFMSRGVGDKG
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 SSSHNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQ-QSKSKNPWYIDEVAEDPAKSLTE
::::::::.::::::::.:::::::::::::::::: :::::: ::::::::::::::::
gi|739 SSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDPAKSLTE
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 MSSDFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELN
.: ::::.::: :::::::::.::::::::::::::::::::..::::::::::::::::
gi|739 ISPDFGHASPPLQPPSMNSLSTENRFHSLPFSLTKMPNTNGSIGHSPLSLSVQSVMGELN
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 STPVQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDEC
..:::::::: ..:::.::::::::::::::::::::::::::::::..:::::::::::
gi|739 NAPVQESPPLAMTSGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDEC
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 AGCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 AGCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEV
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 VEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDI
:::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::.
gi|739 VEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDV
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 EYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 GYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILF
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 HDILRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPS
:.:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
gi|739 HQILRVEPLLKIRSAGQKVQDCYFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPS
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 CLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 CLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISA
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 GKIKQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETS
:.::::::::.:::::::.::::.:.::::::::::::::::::::::::::::::::::
gi|739 GNIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETS
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 HYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRR
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
gi|739 HYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSPEDLHSLDSRR
880 890 900 910 920 930
980 990
mKIAA0 IQGCARRLLCDAYMCMYQSPTMSLYK
::::::::::::::::::::::::::
gi|739 IQGCARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|122134589|sp|Q1RMU2.1|CYLD_BOVIN RecName: Full=Prob (953 aa)
initn: 6161 init1: 3888 opt: 6163 Z-score: 6806.1 bits: 1270.8 E(): 0
Smith-Waterman score: 6163; 94.963% identity (98.216% similar) in 953 aa overlap (48-999:1-953)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::::::::::::::
gi|122 MSSGLWSQEKVTSPYWEERIFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
:::::::::::::::::: ::::::: ::.::.:::::::::::::::::::::::::::
gi|122 TDKQTQKLLKVPKGSIGQNIQDRSVGLSRIPSAKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
:::::::::::::::::::.:::.:: :::::::.::: :::::::::::::::::::::
gi|122 EINEKFTELLLAITNCEERFSLFKNRNRLSKGLQIDVGCPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|122 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDT
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
:::::.::: :::::: ::::::::::::.::. ::::::::::::::::::::::::::
gi|122 GLESDYAGPVDTMQVELPPLEINSRVSLKLGETIESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: :
gi|122 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPESVTQERRPPKLAFMSRGVGDKGSFS
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQ-QSKSKNPWYIDEVAEDPAKSLTEMSS
:::::.::::::::.:::::::::::::::::: :::::: ::::::::::::::::.
gi|122 HNKPKATGSTSDPGTRNRSELFYTLNGSSVDSQPQSKSKNSWYIDEVAEDPAKSLTEIPP
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 DFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTP
::::.::: ::::::::::::::::::::::::::::::..::::::::::::::::..:
gi|122 DFGHASPPLQPPSMNSLSSENRFHSLPFSLTKMPNTNGSISHSPLSLSVQSVMGELNNAP
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 VQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGC
::::::: .::::.::::::::::::::::::::::::::::::..::::::::::::::
gi|122 VQESPPLAVSSGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGC
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|122 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 NTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYY
::::::::::.:::::::::::::::::::::::::::::::.:::::::::::::.:::
gi|122 NTPPKMEKEGFEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYY
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
gi|122 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHHI
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 LRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLI
::::::::::::::::::: :::::::::::::::::::::: :::::::::::::::::
gi|122 LRVEPLLKIRSAGQKVQDCYFYQIFMEKNEKVGVPTIQQLLECSFINSNLKFAEAPSCLI
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|122 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 KQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYV
:::::::..::::::.::::.:.:::::::::::::::::::::::::::::::::::::
gi|122 KQFCKTCNAQVHLHPKRLNHKYNPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYV
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 AFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQG
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
gi|122 AFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLDDLHSLDSRRIQG
880 890 900 910 920 930
980 990
mKIAA0 CARRLLCDAYMCMYQSPTMSLYK
:::::::::::::::::::::::
gi|122 CARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|158259411|dbj|BAF85664.1| unnamed protein product [ (953 aa)
initn: 3854 init1: 3854 opt: 6161 Z-score: 6803.9 bits: 1270.4 E(): 0
Smith-Waterman score: 6161; 94.648% identity (98.321% similar) in 953 aa overlap (48-999:1-953)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::::::::::::::
gi|158 MSSGLWSQEKVTSPYWEERIFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
:::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::::
gi|158 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRIPSAKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
:::::::::::::::::::.:::.:: :::::::.::: :::::::::::::::::::::
gi|158 EINEKFTELLLAITNCEERFSLFKNRNRLSKGLQIDVGCPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|158 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDT
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
.::::.:::::::::: :::::::::::::::. ::::::::::::::::::::::::::
gi|158 ALESDYAGPGDTMQVELPPLEINSRVSLKVGETIESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIPDSVTQERRPPKLAFMSRGVGDKGSSS
::::::::::::::::::: ::::::::::::::.:::::::::::::::::::::::::
gi|158 NPIGNWDGRFDGVQLCSFACVESTILLHINDIIPESVTQERRPPKLAFMSRGVGDKGSSS
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 HNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQ-QSKSKNPWYIDEVAEDPAKSLTEMSS
:::::.::::::::.:::::::::::::::::: :::::: ::::::::::::::::.:.
gi|158 HNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDPAKSLTEIST
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 DFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELNSTP
:: .:::: ::: .:::..::::::::::::::::::::..:::::::.:::: :::..:
gi|158 DFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPLSLSAQSVMEELNTAP
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 VQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGC
::::::: . ::.::::::::::::::::::::::::::::::..::::::::::::::
gi|158 VQESPPLAMPPGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGC
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 TDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEE
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 NTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDIEYY
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::.:::
gi|158 NTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYY
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHDI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
gi|158 SETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHHI
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 LRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLI
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
gi|158 LRVEPLLKIRSAGQKVQDCYFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLI
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 IQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKI
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 KQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETSHYV
:::::::.:::::::.::::.:.:::::::::::::::::::::.:::::::::::::::
gi|158 KQFCKTCNTQVHLHPKRLNHKYNPVSLPKDLPDWDWRHGCIPCQNMELFAVLCIETSHYV
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 AFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQG
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 ALVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQG
880 890 900 910 920 930
980 990
mKIAA0 CARRLLCDAYMCMYQSPTMSLYK
:::::::::::::::::::::::
gi|158 CARRLLCDAYMCMYQSPTMSLYK
940 950
>>gi|51316104|sp|Q9NQC7.1|CYLD_HUMAN RecName: Full=Proba (956 aa)
initn: 5794 init1: 3861 opt: 6152 Z-score: 6793.9 bits: 1268.5 E(): 0
Smith-Waterman score: 6152; 94.456% identity (98.013% similar) in 956 aa overlap (48-999:1-956)
20 30 40 50 60 70
mKIAA0 DLQRVHFFGFYDRFTSGSFLPVNVLKVTVTMSSGLWSQEKVTSPYWEERIFYLLLQECSV
::::::::::::::::::::::::::::::
gi|513 MSSGLWSQEKVTSPYWEERIFYLLLQECSV
10 20 30
80 90 100 110 120 130
mKIAA0 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRVPSTKGKKNQIGLKILEQPHAVLFVDEKDVV
:::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::::
gi|513 TDKQTQKLLKVPKGSIGQYIQDRSVGHSRIPSAKGKKNQIGLKILEQPHAVLFVDEKDVV
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 EINEKFTELLLAITNCEERLSLFRNRLRLSKGLQVDVGSPVKVQLRSGEEKFPGVVRFRG
:::::::::::::::::::.:::.:: :::::::.::: :::::::::::::::::::::
gi|513 EINEKFTELLLAITNCEERFSLFKNRNRLSKGLQIDVGCPVKVQLRSGEEKFPGVVRFRG
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|513 PLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIEDDDT
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 GLESDFAGPGDTMQVEPPPLEINSRVSLKVGESTESGTVIFCDVLPGKESLGYFVGVDMD
.::::.:::::::::: :::::::::::::::. ::::::::::::::::::::::::::
gi|513 ALESDYAGPGDTMQVELPPLEINSRVSLKVGETIESGTVIFCDVLPGKESLGYFVGVDMD
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 NPIGNWDGRFDGVQLCSFASVESTILLHINDIIP---DSVTQERRPPKLAFMSRGVGDKG
::::::::::::::::::: :::::::::::::: .::::::::::::::::::::::
gi|513 NPIGNWDGRFDGVQLCSFACVESTILLHINDIIPALSESVTQERRPPKLAFMSRGVGDKG
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 SSSHNKPKVTGSTSDPGSRNRSELFYTLNGSSVDSQ-QSKSKNPWYIDEVAEDPAKSLTE
::::::::.::::::::.:::::::::::::::::: :::::: ::::::::::::::::
gi|513 SSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDPAKSLTE
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 MSSDFGHSSPPPQPPSMNSLSSENRFHSLPFSLTKMPNTNGSMAHSPLSLSVQSVMGELN
.:.:: .:::: ::: .:::..::::::::::::::::::::..:::::::.:::: :::
gi|513 ISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPLSLSAQSVMEELN
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 STPVQESPPLPISSGNAHGLEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDEC
..:::::::: . ::.::::::::::::::::::::::::::::::..:::::::::::
gi|513 TAPVQESPPLAMPPGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDEC
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 AGCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 AGCTDGTFRGTRYFTCALKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEV
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 VEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSALDTVLLRPKEKNDI
:::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::.
gi|513 VEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDV
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 EYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 EYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILF
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 HDILRVEPLLKIRSAGQKVQDCNFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPS
: :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
gi|513 HHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNEKVGVPTIQQLLEWSFINSNLKFAEAPS
700 710 720 730 740 750
800 810 820 830 840 850
mKIAA0 CLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 CLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISA
760 770 780 790 800 810
860 870 880 890 900 910
mKIAA0 GKIKQFCKTCSTQVHLHPRRLNHSYHPVSLPKDLPDWDWRHGCIPCQKMELFAVLCIETS
::::::::::.:::::::.::::.:.:::::::::::::::::::::.::::::::::::
gi|513 GKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKDLPDWDWRHGCIPCQNMELFAVLCIETS
820 830 840 850 860 870
920 930 940 950 960 970
mKIAA0 HYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|513 HYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRR
880 890 900 910 920 930
980 990
mKIAA0 IQGCARRLLCDAYMCMYQSPTMSLYK
::::::::::::::::::::::::::
gi|513 IQGCARRLLCDAYMCMYQSPTMSLYK
940 950
999 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Mon Mar 16 18:13:14 2009 done: Mon Mar 16 18:22:20 2009
Total Scan time: 1187.850 Total Display time: 0.550
Function used was FASTA [version 34.26.5 April 26, 2007]