Comparison of KIAA cDNA sequences between mouse and human (FLJ00220)
<<Original sequence data>>
mouse mFLJ00220 (mbh04436) length: 4406 bp, CDS: 1932 - 2576
human (sj05828) length: 4240 bp, CDS: 1019 - 2530
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 10 - 1981 797 998 55.6
CDS: 1982 - 2746 390 124 24.1
3'UTR: 2747 - 4589 742 152 17.0
amino acid
CDS: 1982 - 2746 126 84 40.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mbh04436 1 .........GAAAGGCTCTCGGTCTTGGCTGGCAATCCAATTGCCTTTCC 41
| | | | | | |||| ||| || | |
sj05828 1 GCCGAGCCTCCCGGCCCCGCCGGCCCCGCTGCTGCTCCTCGGGCTGCTGC 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mbh04436 42 CCAACCCTGCCCACCAGGTGCAAGTGGTAGGTACAG.GTAGCGAGGTGGT 90
| ||| | || | | | || ||| | | ||| |
sj05828 51 TGCTCGGCTCCCGGCCGGCCCGCGGCGCCGGCCCAGAGCCCCCCCGTGCT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mbh04436 91 GGCCATGACACTGGAGACCAAGCCTCAGCGGAAGAACCAGCGCACTGTCC 140
| |||| || | | | || || || | ||
sj05828 101 GCCCAT..............CCGTTCTGAGAAGGAGCCGCTGCCCGTTCG 136
151 ----+----*----+----*----+----*----+----*----+----* 200
mbh04436 141 TGTGCCACATGGCTGGACTCCAGCCGGGAGGACACATGGTGAGGGCTCCA 190
| | ||||| || | ||||| | ||| || | |
sj05828 137 GGGAGCGGCAGGCTGCACCTTCGGCGGGAAGGTCTATGCCTTGGACGAGA 186
201 ----+----*----+----*----+----*----+----*----+----* 250
mbh04436 191 GGCAGAGTTGTGCCAGGGCTGCCAATACATGGGCTGCGGGAAGCCAGGTT 240
| | || || | ||| |||||
sj05828 187 CGTGG....................CACCCGGACCTAGGGGAGCCATTCG 216
251 ----+----*----+----*----+----*----+----*----+----* 300
mbh04436 241 GGTTGAGTAGGGGTGTGTAGTACTGTTCACACACACATGGGTTCTCTCAA 290
|| ||| | | ||| || | | | | | ||||
sj05828 217 GGGTGATGCGCTGCGTGCTGTGCGCCTGCGAGGCGC.........CTCAG 257
301 ----+----*----+----*----+----*----+----*----+----* 350
mbh04436 291 TGAGTTCTTTATTCATTTGACACGTTTTGGTAAACCTTAGGCTAGAAACC 340
|| | || | | | | | || | ||
sj05828 258 TGGGGTCGCCGTACCAGGGGCCCTGGCAGGGTCAGCT............. 294
351 ----+----*----+----*----+----*----+----*----+----* 400
mbh04436 341 TTGTTCTCAGCAAGCTCATAGTGAAATAGGGAACACCACTCACGGGAACA 390
|| || ||| | | | ||| || | ||
sj05828 295 ......GCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGGCAG 338
401 ----+----*----+----*----+----*----+----*----+----* 450
mbh04436 391 GTGCAATAGCCCATGAGATAGTACTAATTGAACTTTTGGGGTCTGTCAGG 440
|| ||| | || | | || || || | ||||
sj05828 339 CCGCGCCAGCTGCCGGGACACTGCTGCCAGACCT.......GCCCCCAGG 381
451 ----+----*----+----*----+----*----+----*----+----* 500
mbh04436 441 CACGAACGTGGTTGCCTCCTTTGTGTACATTTTGCCTTTCCCAGTACCCT 490
|| | | | | | | | | | |||| ||
sj05828 382 AGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCG 431
501 ----+----*----+----*----+----*----+----*----+----* 550
mbh04436 491 TTGATAAAGGAGAAGTAAAGACTCGCAGATGAGTAACTCTTCAAGGGTTG 540
| |||| | | | || || |
sj05828 432 CGGGACCCGGAGCA...................TCGCAGTTATAGCGACC 462
551 ----+----*----+----*----+----*----+----*----+----* 600
mbh04436 541 TGGTATGTCTAGGATGCGGCAGAGGAGGTTCTTGACACTCGACCTACAAA 590
| | ||| || | ||| || | || | | || |
sj05828 463 GCGGGGAGCCAGGC.GCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGA 511
601 ----+----*----+----*----+----*----+----*----+----* 650
mbh04436 591 GTTCTTGTCCAGTGTTATTGGGATGAGGAAGGATATACGTGTGGTGGAGG 640
||| || | | | ||| |||| | | || || ||
sj05828 512 CTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCA.........GGCGGTGG 552
651 ----+----*----+----*----+----*----+----*----+----* 700
mbh04436 641 CATAAGATATGGGAAGCCCTTGGCATCTGAAAGTGAGAGGGCTCATCCTT 690
|| | | | | || ||| || | | || |
sj05828 553 CACGA......GCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTC..T 594
701 ----+----*----+----*----+----*----+----*----+----* 750
mbh04436 691 CTTTGACCCCTAGGCTGTGGGTATGTGCT.CTGGGCTGGGTGCCCGAGGG 739
|| | || |||| | || | || | || | | | ||
sj05828 595 CTATCTCCTACAGGCGGCTGGACCGCCCTACCAGGATCCGCTTCTCAGAC 644
751 ----+----*----+----*----+----*----+----*----+----* 800
mbh04436 740 GCTCATATGCTGCTACAGAACGAGCTGTTCCTGAATGTTGGTACCAAGGA 789
| || | | | |||| || | ||| | ||
sj05828 645 TCCAATGGCAGTGTCCTGTTTGAGC...ACCCTGCAGCCCCCACCCAAGA 691
801 ----+----*----+----*----+----*----+----*----+----* 850
mbh04436 790 CTTCCCAGATGGAGAGCTTCGGGGGCATGTGACTGCCCTATGCTACAGTG 839
|| | | | | | || || ||| || | || | | |
sj05828 692 TGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCT..CGGTTGTCTCTGCG 739
851 ----+----*----+----*----+----*----+----*----+----* 900
mbh04436 840 GGCACAGTGCCCGCTATGACAGTGAGTGCCTCATGGTCTACCTGCCCACC 889
| | | | | | | ||| | | || || | ||||
sj05828 740 GCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGACACTCACTCACC 789
901 ----+----*----+----*----+----*----+----*----+----* 950
mbh04436 890 TATGTCCTCTGACCTGCCATCCAAGCATCCAAAGAATTAGCCAGAGATCC 939
| | ||| || ||||| | ||| | | |
sj05828 790 CTTCAGGGGAGGTCTGGGGGCCTCTCATCC.GGCACCGGGCCCTGGCTGC 838
951 ----+----*----+----*----+----*----+----*----+----* 1000
mbh04436 940 AGAG....CTTGAGCTGTCTGATCTCTGGTTGGCATTTAGAGAGGTGGGG 985
|||| | || || |||| | ||| |
sj05828 839 AGAGACCTTCAGTGCCATCCTGACTCTAGAAGGC.....CCCCCACAGCA 883
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mbh04436 986 ATGTGTAGGGTGAAGCTACTGGCCAACCATCCCTGTTGCCATTGTGCAAG 1035
| |||||| | | | | || || || || | |
sj05828 884 GGGCGTAGGGGGCATCACCCTGCTCACTCTCAGTGACACAGAGGACTCCT 933
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mbh04436 1036 GAAGCTAAGACTTGCTATTCCCCAAGC.CCTAGATCTGGGGTGGGGCAGG 1084
| |||| |||| || || || | || | || |
sj05828 934 TGCATTTTTTGCTGCTCTTCCGAGGGCTGCTGGAACCCAGGAGTGGGGGT 983
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mbh04436 1085 ATGAGATTAAGAGCACAATCTCAGGTGTCATCTCTCATCTGTTTGGATTT 1134
| | | | | || | | || | ||
sj05828 984 AAGTGGGATGGGGGCAAAACAC................GTGAGAAGGTTA 1017
1151 ----+----*----+----*----+----*----+----*----+----* 1200
G L P V P L A G A L V L P V R S
mbh04436 1135 AGGATTGCCTGTGCCTCTGGCAGGGGCACTAGTGCTGCCCCCTGTGCGGA 1184
||| || || ||| | ||| ||| |||| | ||| |||
sj05828 1018 GGGAGAGCACCTGTCTCAGAAAGGCCCACATGTGCGG...CCTTGCAGGA 1064
G E H L S Q K G P H V R P C R T
1201 ----+----*----+----*----+----*----+----*----+----* 1250
Q A G A R L A L L G Y T L S L T
mbh04436 1185 GTCAGGCAGCAGGGCACGCCTGGCTCTCCTTGGATACACATTGTCACTTA 1234
| | ||| | | | ||||| | || | || ||
sj05828 1065 CTAACCCAG..GTTCCCTTGAGGCTCCAGATTCTACACCAGGGGCAGCTA 1112
N P G S L E A P D S T P G A A T
1251 ----+----*----+----*----+----*----+----*----+----* 1300
L * S S L A G L G G S E Q G T V
mbh04436 1235 CACTATGAAGTTCTATTGGCTGGGCTTGGTGGCTCAGAGCAAGGAACTGT 1284
| ||| ||| | | || | ||| ||| |||
sj05828 1113 CTGCGAGAACTTC.AGGCCAATGTCTCAGCCCAGGTGAGTGGGGATCTGG 1161
A R T S G Q C L S P G E W G S G
1301 ----+----*----+----*----+----*----+----*----+----* 1350
T A H L L G P P G -
mbh04436 1285 CACT...GCCCACCTCCTTGGGCCTCCTGGGA.................. 1313
| || |||||| | |||||| || |
sj05828 1162 CTCTCGCTGCCACCTGTCTTGGCCTCTTGCTATTGCCCATCACACCCTGC 1211
S R C H L S W P L A I A H H T L L
1351 ----+----*----+----*----+----*----+----*----+----* 1400
A R A P A A A E G I L W L R G
mbh04436 1314 ....TGCCAGGGCCCCAGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGT 1359
| || || |||| |||||| | | | | || | ||
sj05828 1212 TCTGTCCCCAGGAACCAGGCTTTGCTGAGGTGCTGCCCAACCTGACAGTC 1261
C P Q E P G F A E V L P N L T V
1401 ----+----*----+----*----+----*----+----*----+----* 1450
K D R D G K K L R N L P F * L
mbh04436 1360 AAAGTCATAGAGATGGGAAGAAGCTTAGAAATTTTCTGCCTTTTTAGCTT 1409
| | | | || || | ||| | | |||| | ||
sj05828 1262 CAGG..AGATGGACTGGCTGGTGCTGGGGGA...GCTGCAGATGGCCCTG 1306
Q E M D W L V L G E L Q M A L
1451 ----+----*----+----*----+----*----+----*----+----* 1500
E G P C G P G L W * R E Q V A
mbh04436 1410 GAAGGGCCATGTGGACCTGTGGTTGTGGTAGAGAGAGCAGGTGGCCTGGT 1459
|| || || | | || | || || | || | || | ||
sj05828 1307 GAGTGGGCAGGCAGGCCAG.GGCTGCGCATCAGTGGACACATTGC..... 1350
E W A G R P G L R I S G H I A
1501 ----+----*----+----*----+----*----+----*----+----* 1550
Y R A G L A G C R C L T D L G V
mbh04436 1460 ATTACAGAGCAGGCTTGGCCGGCTGTAGGTGTCTGACAGACCTGGGTGTA 1509
| ||| ||| | || | || | || ||
sj05828 1351 .TGCCAGGAAGAGCTGCGACGTCCTGCAAAGTGTCCTTTGTGGGGCTGAT 1399
A R K S C D V L Q S V L C G A D
1551 ----+----*----+----*----+----*----+----*----+----* 1600
S L I Q D Y A F S F V S S V L R
mbh04436 1510 AGTCTGATTCAGGCTTTACTATGCATTTTCTTTTGTGTCCTCTGTCCTAA 1559
||||| | | | | | | || | || | ||| |
sj05828 1400 GCCCTGATCCCAG....TCCAGACGGGTGCTGCCGGCTCAGCCAGCCTCA 1445
A L I P V Q T G A A G S A S L T
1601 ----+----*----+----*----+----*----+----*----+----* 1650
F P G Q R S Q P Q K * * V G W
mbh04436 1560 ATGATTTCCAGGACAGAGGTCCCAAGCCACAAAAGTAGTAGGTGGGATGG 1609
| | |||| | | |||| | | || | | |||| | ||
sj05828 1446 ..CGCTGCTAGGAAATGGCTCCC.TGATCTATCAGGTGCAAGTGGTAGGG 1492
L L G N G S L I Y Q V Q V V G
1651 ----+----*----+----*----+----*----+----*----+----* 1700
T S S * V V * A A V E T * S H
mbh04436 1610 ACCACATCCTCTTAAGTGGTGTGAGCTGCAGTCGCAGAGACCTAGTCTCA 1659
||| | | | |||||| || | |||||| || ||||
sj05828 1493 ...ACAAGCAGTGAGGTGGTGGCCATGACACT...GGAGACCAAGCCTCA 1536
T S S E V V A M T L E T K P Q
1701 ----+----*----+----*----+----*----+----*----+----* 1750
Q C E K A L I M G L F L Y
mbh04436 1660 CAGCTCTTCTCCAATGTGAGAAGGCCTTAATCATGGGTCTGTTTCTTTAT 1709
| | || || | || || | | | |
sj05828 1537 ..........GCGGAGGGATCAGCGCACTGTCCTGTGCCACATGGCTGGA 1576
R R D Q R T V L C H M A G
1751 ----+----*----+----*----+----*----+----*----+----* 1800
L K I G P W A V S * S V P K C P
mbh04436 1710 CTGAAAATTGGA.GACCATGGGCTGTGTCTTAAAGTGTCCCAAAGTGTCC 1758
|| | ||| ||| ||| ||| | | | || |
sj05828 1577 CTCCAGCCAGGAGGACACACGGCCGTGGGTATCTGCCCTGGGCTGGGTGC 1626
L Q P G G H T A V G I C P G L G A
1801 ----+----*----+----*----+----*----+----*----+----* 1850
C G A G G V A Q - V W L L F W G
mbh04436 1759 TTGTGGGGCTGGAGGGGTGGCTCAGCA....GTGTGGCTGCTCTTCTGGG 1804
| |||||| | || ||| | | | ||| | | |
sj05828 1627 CCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCA 1676
R G A H M L L Q N E L F L N V G T
1851 ----+----*----+----*----+----*----+----*----+----* 1900
I Q F Q F P A P T W * L T T I C
mbh04436 1805 GGATCCAGTTTCAGTTCCCAGCACCCACTTGGTAGCTCACAACCATCTGT 1854
| | || | | || | || | | | || |
sj05828 1677 CCAAGGACTTCCCAGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGCCC 1726
K D F P D G E L R G H V A A L P
1901 ----+----*----+----*----+----*----+----*----+----* 1950
N F S Y R E S N A L F W P L W T P
mbh04436 1855 AACTTCAGTTACAGGGAATCCAATGCCCTCTTCTGGCCTCTATGGACACC 1904
||| | | || | | ||| | | | ||
sj05828 1727 TACTGTGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGG 1776
Y C G H S A R H D T L P V P L A G
1951 ----+----*----+----*----+----*----+----*----+----* 2000
G K M L I H I N - M I * K P * C
mbh04436 1905 AGGCAAAATGCTAATACACATAAATA...AAATGATATAAAAACCCTGAT 1951
|| | ||||| | | || | || | | ||||
sj05828 1777 AGCCCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGC 1826
A L V L P P V K S Q A A G H A W L
2001 ----+----*----+----*----+----*----+----*----+----* 2050
A L F L L
mbh04436 1952 GTGCCTTGTTTCTACTC................................. 1968
| ||||| | | |
sj05828 1827 TTTCCTTGGATACCCACTGTCACCTGCACTATGAAGTGCTGCTGGCTGGG 1876
S L D T H C H L H Y E V L L A G
2051 ----+----*----+----*----+----*----+----*----+----* 2100
L L G L S
mbh04436 1969 ...................................CTTACTTGGTCTGTC 1983
| | ||||| | |
sj05828 1877 CTTGGTGGCTCAGAACAAGGCACTGTCACTGCCCACCTCCTTGGGCCTCC 1926
L G G S E Q G T V T A H L L G P P
2101 ----+----*----+----*----+----*----+----*----+----* 2150
- Q A
mbh04436 1984 TG............................................CAGG 1989
|| |||
sj05828 1927 TGGAACGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGG 1976
G T P G P R R L L K G F Y G S E A
2151 ----+----*----+----*----+----*----+----*----+----* 2200
Q G V V K D L E P V L L R H L A
mbh04436 1990 CTCAGGGCGTGGTAAAAGATCTGGAGCCTGTGCTGCTGCGGCACCTGGCA 2039
| ||||| ||||| || || |||||||| | ||||||||||||||||||
sj05828 1977 CCCAGGGTGTGGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCA 2026
Q G V V K D L E P E L L R H L A
2201 ----+----*----+----*----+----*----+----*----+----* 2250
Q G T A S L L I T T K S S P R G E
mbh04436 2040 CAGGGCACTGCCTCCCTGCTCATCACCACCAAGAGTAGCCCCAGAGGAGA 2089
| |||| ||||||||| | |||||||||||| ||||||||||||| ||
sj05828 2027 AAAGGCATGGCCTCCCTGATGATCACCACCAAGGGTAGCCCCAGAGGGGA 2076
K G M A S L M I T T K G S P R G E
2251 ----+----*----+----*----+----*----+----*----+----* 2300
L R G Q V H I A S Q C E A G G L R
mbh04436 2090 ACTACGTGGGCAGGTGCACATTGCCAGTCAGTGTGAGGCGGGAGGCCTGC 2139
|| || |||||||||||||| |||| || ||||||| || || ||||
sj05828 2077 GCTCCGAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGACTGC 2126
L R G Q V H I A N Q C E V G G L R
2301 ----+----*----+----*----+----*----+----*----+----* 2350
L A S E G V Q M P L A P N
mbh04436 2140 GTCTG.........GCCTCAGAAGGAGTGCAGATGCCCTTGGCTCCAAAT 2180
| ||| | | || || |||| | || |||||| ||
sj05828 2127 GCCTGGAGGCGGCCGGGGCCGAGGGGGTGCGGGCGCTGGGGGCTCCGGAT 2176
L E A A G A E G V R A L G A P D
2351 ----+----*----+----*----+----*----+----*----+----* 2400
G E A A T S P M L P A G P A
mbh04436 2181 GGAGAGGCGGCTACGTCACCCATGCTGCCTGCTGGCCCTGGCCCTGAAGC 2230
|| | ||| || | || || |||||| | ||| ||
sj05828 2177 ACAGCCTCTGCTGCGCCGCCTGTGGTGCCTGGTCTCCC.........GGC 2217
T A S A A P P V V P G L P A
2401 ----+----*----+----*----+----*----+----*----+----* 2450
P V P A K H G S P G R P R D P N T
mbh04436 2231 CCCAGTACCAGCCAAACATGGCAGCCCTGGGAGACCCCGAGATCCTAACA 2280
|| || || ||||||| ||| | |||||| | |||||||| || ||||
sj05828 2218 CCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACA 2267
L A P A K P G G P G R P R D P N T
2451 ----+----*----+----*----+----*----+----*----+----* 2500
C F F E G Q Q R P H G A R W A P
mbh04436 2281 CATGTTTCTTCGAGGGGCAGCAGCGGCCCCACGGGGCTCGCTGGGCACCC 2330
|||| |||||||||||||||||||| |||||||||||||||||||| |||
sj05828 2268 CATGCTTCTTCGAGGGGCAGCAGCGCCCCCACGGGGCTCGCTGGGCGCCC 2317
C F F E G Q Q R P H G A R W A P
2501 ----+----*----+----*----+----*----+----*----+----* 2550
N Y D P L C S L C I C
mbh04436 2331 AACTATGACCCACTCTGCTCCCTCTGCATCTGCCAGGTAGGATGTTTGGG 2380
||||| ||||| |||||||| ||||||| ||||
sj05828 2318 AACTACGACCCGCTCTGCTCACTCTGCACCTGC................. 2350
N Y D P L C S L C T C
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mbh04436 2381 TAAGGGACAGTTGGCTACAGGGTCTGGGGCAAGGGGCCCAACACACCTTC 2430
sj05828 2351 .................................................. 2351
2601 ----+----*----+----*----+----*----+----*----+----* 2650
Q R R T V I C D P V
mbh04436 2431 AAAGCCTTGGCCCCTTTCTACAGAGACGAACAGTGATCTGTGACCCTGTA 2480
||||||||||| |||||||||||||| ||
sj05828 2351 ....................CAGAGACGAACGGTGATCTGTGACCCGGTG 2380
Q R R T V I C D P V
2651 ----+----*----+----*----+----*----+----*----+----* 2700
V C P P P S C P H P V Q A L D Q C
mbh04436 2481 GTATGCCCACCACCAAGCTGTCCCCACCCGGTGCAGGCACTGGACCAGTG 2530
|| |||||||| || ||||| || |||||||||||||| | ||||||||
sj05828 2381 GTGTGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTG 2430
V C P P P S C P H P V Q A P D Q C
2701 ----+----*----+----*----+----*----+----*----+----* 2750
C P
mbh04436 2531 CTGTCCCGTGTGTCCAGGTGAATGTCCTGCAGGGGAGGAAAGGTAGTGGA 2580
||| ||
sj05828 2431 CTGCCC............................................ 2436
C P
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbh04436 2581 GGGGCGTTCATGGAAAAGGAATGTTCTAGGGAGGGAAGCAAAGGCGACTC 2630
sj05828 2437 .................................................. 2437
2801 ----+----*----+----*----+----*----+----*----+----* 2850
V S T E K Q R S R D
mbh04436 2631 TCTGCCTCACCCTTTTCTTTGTCTCCACAGAGAAACAACGCAGTAGAGAC 2680
||| | | | ||||||||| ||||||
sj05828 2437 ...................TGTTTGCCCTGAGAAACAAGATGTCAGAGAC 2467
V C P E K Q D V R D
2851 ----+----*----+----*----+----*----+----*----+----* 2900
L P S L P N L E P G E
mbh04436 2681 CTCCCCAGCCTACCA...AATCTGGAGCCAGGAGAGGGCTGCTATTTTGA 2727
| || | || ||| | | ||| |||||||||
sj05828 2468 TTGCCAGGGCTGCCAAGGAGCCGGGACCCAGGAGAG.............. 2503
L P G L P R S R D P G E
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbh04436 2728 TGGTGACCGGAGCTGGAGGGCAGCGGGTACCCGATGGCACCCTGTTGTGC 2777
sj05828 2504 .................................................. 2504
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbh04436 2778 CCCCCTTTGGCCTAATTAAGTGTGCTGTCTGCACCTGCAAGGTATGGCTG 2827
sj05828 2504 .................................................. 2504
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbh04436 2828 CCTAATCTTCCCTGCTATCATAACCCAGTCAGGTCTACAGATAGAGATGG 2877
sj05828 2504 .................................................. 2504
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbh04436 2878 GGACTTCCTGGAGAGCAAGCCTGTCCTTGATGAGGAGGTCTCAGGATGGT 2927
sj05828 2504 .................................................. 2504
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbh04436 2928 ATTGTGAGGGGCAGTCCCTGGGGTTTGGAGAGCAGGTTTCCTGTGGGAGG 2977
sj05828 2504 .................................................. 2504
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbh04436 2978 GGTTAAAAAGCCGACAGGTACAAGCTTTGGCTGTGTCAGCTGACTGAGTT 3027
sj05828 2504 .................................................. 2504
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbh04436 3028 CACGTGACCCTCAGTGATTTCTGAACTTTCCCCAAGCTCCCCATTCCTCC 3077
sj05828 2504 .................................................. 2504
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbh04436 3078 CCTGTGTGCAAATATGCCATCCTATATACAATGAGGACTGGATTCAGATA 3127
sj05828 2504 .................................................. 2504
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbh04436 3128 TATAGGGCAAACTCAGGCCTCTGAGCATTGGCCACACATATATTTGACTT 3177
sj05828 2504 .................................................. 2504
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbh04436 3178 GAGGTGGGAAAGGAGAGAGAAAGCAGTGTGACGGTTGTACGTCCCTCCGC 3227
sj05828 2504 .................................................. 2504
3401 ----+----*----+----*----+----*----+----*----+----* 3450
G G H G R G
mbh04436 3228 CTGACACCCTCTCTCAATGGGTGCCTGCCTACAGGGGGCCACGGGAGAGG 3277
||||| ||| |||||||
sj05828 2504 .................................GGGGGGCACTGGAGAGG 2520
G G H W R G
3451 ----+----*----+----*----+----*----+----*----+----* 3500
A L *
mbh04436 3278 TGCACTGTGAGAAGGTGCAGTGTCCTCGCCTGGCCTGTGCTCAGCCTGTC 3327
||||||||||||||||||||||||| || ||||||||||| ||||||||
sj05828 2521 TGCACTGTGAGAAGGTGCAGTGTCCCCGGCTGGCCTGTGCCCAGCCTGTG 2570
A L *
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbh04436 3328 CGTGCCAACCCCACCGACTGCTGCAAACAGTGTCCAGTAGGGTCAGGGAC 3377
|||| ||||||||||||||||||||||||||||||||| ||||| ||| |
sj05828 2571 CGTGTCAACCCCACCGACTGCTGCAAACAGTGTCCAGTGGGGTCGGGGGC 2620
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbh04436 3378 TAATGCCAAGCTGGGAGACCCCATGCAGGCTGATGGGCCTCGGGGGTGTC 3427
| || ||||||| ||||||||||||||||||||||| ||||| || |
sj05828 2621 CCACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGCCCCGGGGCTGCC 2670
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbh04436 3428 GCTTTGCTGGGCAGTGGTTCCCAGAGAATCAGAGCTGGCACCCATCAGTG 3477
| ||||||||||||||||||||||||| ||||||||||||||| ||||||
sj05828 2671 GTTTTGCTGGGCAGTGGTTCCCAGAGAGTCAGAGCTGGCACCCCTCAGTG 2720
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbh04436 3478 CCCCCCTTTGGGGAGATGAGCTGTATTACCTGCAGATGTGGGGCAGGGGT 3527
||||| ||||| |||||||||||||| |||||||||||||||||||||||
sj05828 2721 CCCCCTTTTGGAGAGATGAGCTGTATCACCTGCAGATGTGGGGCAGGGGT 2770
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbh04436 3528 ACCCCACTGTGAGCGGGACGATTGTTCACCGCCGCTATCCTGTGGCTCAG 3577
|| |||||||||||||| || ||||||| ||| || ||||||||||| |
sj05828 2771 GCCTCACTGTGAGCGGGATGACTGTTCACTGCCACTGTCCTGTGGCTCGG 2820
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbh04436 3578 GGAAGGAGAGTCGATGCTGTTCCCACTGCACAGCCCAAAGGTGTAAGTGA 3627
|||||||||||||||||||||||| |||||| ||||| || |
sj05828 2821 GGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCG....... 2863
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbh04436 3628 AGGAAGCCACAGATGGTGTGGGCTGGCTGTGTGACTCTGGGAGGGAAGGG 3677
sj05828 2864 .................................................. 2864
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbh04436 3678 TGCCCCATGGAGGTAGGAACTATGAGTCTGATTCATAAGTGCAATCCCAG 3727
sj05828 2864 .................................................. 2864
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbh04436 3728 CCTACCTCTCCAGGCTTCTCACTTACTGTTGTTTCTTTACAAATGAGACT 3777
sj05828 2864 .................................................. 2864
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbh04436 3778 TCTGAAGCTCAGAGGAATTAAGCAACCACACTGCAGGTGGTGTATGCTGA 3827
sj05828 2864 .................................................. 2864
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbh04436 3828 CTTTCTTGGACAACTTGGTCCTTTCTGGGACTGGAGCAGAGATGTGCTGC 3877
sj05828 2864 .................................................. 2864
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbh04436 3878 CTGCCCCCCACCCCCACTCCCGTGTCTTCTTCCAGACCTCTCTGCTTCCC 3927
sj05828 2864 .................................................. 2864
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbh04436 3928 ATCTCCTTCTGTCTTCAGCAGCCTCTGAGACTAGAACCCTTCCAGAGCTG 3977
||||| | ||||| ||||| ||||||||||
sj05828 2864 ................GCCAGCCCCAGAGACCAGAACTGATCCAGAGCTG 2897
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbh04436 3978 GAGAAAGAAGCGGAGCACTCCTAGGGAGCATCCAGAAGGCCATATGACCA 4027
||||||||||| || ||| ||||||||| ||||| ||||| ||||||
sj05828 2898 GAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGTGACCA 2947
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mbh04436 4028 AGAGGAT.GGGCCTGAGCTGGGAGAAGGAGTGGTGCTGAGGACC....CC 4072
||||||| |||||||||||||| ||||| |||| |||||||
sj05828 2948 AGAGGATGGGGCCTGAGCTGGG.GAAGGGGTGGCATCGAGGACCTTCTTG 2996
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mbh04436 4073 GACTCTCCTGTGGGAA.CCCAGTGCCTTTCGTGCCTCTGCTCTGCTTCTT 4121
| ||||||||||||| |||||||||||| | |||||| |||| |||
sj05828 2997 CATTCTCCTGTGGGAAGCCCAGTGCCTTT.GCTCCTCTGTCCTGCCTCTA 3045
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mbh04436 4122 CT.CCTCCCCCACTACCTCTGGGAACCACAAGTCTACAA.GGGGAAAGAC 4169
|| || |||||||||||||||||||||||| || |||| ||||| || |
sj05828 3046 CTCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGC 3095
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mbh04436 4170 TGCTGGGTCAGACCAAGGCCATATCCATGCGAACTCCTGCCCTGTTTTCT 4219
|||||| |||||| ||| || | ||| | || |||||||||| |
sj05828 3096 AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTCCTGCCCTG.CCACC 3144
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mbh04436 4220 TTTGGCCTCTGTCCCACAAG.CTTAACTCTTTTCTTCTGTACAGAACACC 4268
| ||||||||||| ||| | | | |||| || ||||||| || |
sj05828 3145 CTCGGCCTCTGTCCTGGAAGCCCCACCCCTTTCCTCCTGTACATAATGTC 3194
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mbh04436 4269 ACTGGCTTATTGGGATTCTTTAATTTATCCTCACTCAGCACCAAGGGTTC 4318
|||||||| |||||||| ||||||||||| ||||||||||||||||| |
sj05828 3195 ACTGGCTTGTTGGGATT.TTTAATTTATCTTCACTCAGCACCAAGGGCCC 3243
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mbh04436 4319 CC.TCACACCATTCCTGCTACCCCTGAGCTGAGCAGAGTCATTATTAGAG 4367
|| ||| ||| ||||||| |||||||||||||||||||||||||| |||
sj05828 3244 CCGACACTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAG 3293
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mbh04436 4368 ATTTTTTTTTGTATTTATTAAAACATCTTTTTTTCAGTC........... 4406
| |||||||||||||||||||| | ||||||||||
sj05828 3294 A....GTTTTGTATTTATTAAAACATTTCTTTTTCAGTCTTTGGGCATGA 3339
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mbh04436 4407 .................................................. 4407
sj05828 3340 GGTTGGCTCTTTGTGGCCAGGAACCTGAGTGGGGCCTGGTGGAGAAGGGG 3389
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mbh04436 4407 .................................................. 4407
sj05828 3390 CAGAGAGTAGGAGGTGAGAGAGAGGAGCTCTGACACTTGGGGAGCTGAAA 3439
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mbh04436 4407 .................................................. 4407
sj05828 3440 GAGACCTGGAGAGGCAGAGGATAGCGTGGCAGTTGGCTGGCATGCCTGGG 3489
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mbh04436 4407 .................................................. 4407
sj05828 3490 TTCCGCAGAGGGGCTGGGGATGGTTCTTGAGATGGTCTAGAGACTCAAGA 3539
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mbh04436 4407 .................................................. 4407
sj05828 3540 ATTTAGGGAAGTAGAAGCAGGATTTTGACTCAAGTTTAGTTTCCCACATC 3589
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mbh04436 4407 .................................................. 4407
sj05828 3590 GCTGGCCTGTTTGCTGACTTCATGTTTGAAGTTGCTCCAGAGAGAGAATC 3639
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mbh04436 4407 .................................................. 4407
sj05828 3640 AAAGGTGTCACCAGCCCCTCTCTCCCTCCTTCCCTTCCCTTCCCTTTCTT 3689
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mbh04436 4407 .................................................. 4407
sj05828 3690 TCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCT 3739
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mbh04436 4407 .................................................. 4407
sj05828 3740 TCCCTTCACTCTCCCTTCCCTCTCCCTTCCCTTCCCTTCTCCTTCGTTCA 3789
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mbh04436 4407 .................................................. 4407
sj05828 3790 CAGCAATGGGGTCTTGCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGCC 3839
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mbh04436 4407 .................................................. 4407
sj05828 3840 TCAAGTGATCCTCCTGCCTTGGCCTTCCAAAGTGTTGGGATTACAGGCAT 3889
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mbh04436 4407 .................................................. 4407
sj05828 3890 GAGCCACCACACCCAGCCCAGCCTCTACCTTCTTTGTCTAAAGTGAGGCA 3939
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mbh04436 4407 .................................................. 4407
sj05828 3940 AACACTTTTCTGTTTTTTTCCTGGAAACTCGTGTTCTGGACCAGTTCTGG 3989
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mbh04436 4407 .................................................. 4407
sj05828 3990 GGCAAACTGGGGTCAGAGTGGATTGGAATCAGCTCTGATCCAGCTTTTGG 4039
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mbh04436 4407 .................................................. 4407
sj05828 4040 CTGTGCTTACCTTGAGACCAAATCATGTAGAGAATAAGACAAGACCCTCC 4089
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mbh04436 4407 .................................................. 4407
sj05828 4090 TGCCCTGTTACCCTCTTCTCTCTCCCCTCCCTCATTCCTACCATCAAGAC 4139
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mbh04436 4407 .................................................. 4407
sj05828 4140 CCAGGCATTTTGACAAGCTCTAGGAAATGAGGGTATCAGAACAGAAATCT 4189
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mbh04436 4407 .................................................. 4407
sj05828 4190 AACAAATGTATGTAGCTGCAGATCCATCTTTCATATAAACAATGTGGAGT 4239
5501 - 5501
mbh04436 4407 . 4407
sj05828 4240 C 4240