Comparison of KIAA cDNA sequences between mouse and human (KIAA0943)
<<Original sequence data>>
mouse mKIAA0943 (mbh04274) length: 4185 bp, CDS: 2966 - 3766
human KIAA0943 (bm03784) length: 2778 bp, CDS: 2 - 1192
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 11 - 1 0 0 0.0
CDS: 2 - 1807 788 416 34.6
3'UTR: 1808 - 4203 763 849 52.7
amino acid
CDS: 2 - 1807 206 191 48.1
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
M D A A T L T Y D T L R F A
mbh04274 1 ..........ATGGACGCAGCCACTTTGACATATGATACTCTCCGGTTTG 40
||||||||||| ||| |||| || || |||||||||||||
bm03784 1 GACTGGGAAGATGGACGCAGCTACTCTGACCTACGACACTCTCCGGTTTG 50
T G K M D A A T L T Y D T L R F A
51 ----+----*----+----*----+----*----+----*----+----* 100
E F E D F P E T S E P V W I L G
mbh04274 41 CTGAATTTGAAGATTTCCCTGAGACCTCAGAGCCTGTTTGGATTCTGGGC 90
|||| ||||||||||| ||||||||||||||||| |||||||| |||||
bm03784 51 CTGAGTTTGAAGATTTTCCTGAGACCTCAGAGCCCGTTTGGATACTGGGT 100
E F E D F P E T S E P V W I L G
101 ----+----*----+----*----+----*----+----*----+----* 150
R K Y S I F T E K D E I L S D V A
mbh04274 91 AGAAAATACAGCATTTTCACAGAGAAGGACGAAATCTTGTCTGATGTTGC 140
||||||||||||||||||||||| |||||||| |||||||||||||| ||
bm03784 101 AGAAAATACAGCATTTTCACAGAAAAGGACGAGATCTTGTCTGATGTGGC 150
R K Y S I F T E K D E I L S D V A
151 ----+----*----+----*----+----*----+----*----+----* 200
S R L W F T Y R R N F P A I G G T
mbh04274 141 ATCCAGACTTTGGTTTACATACAGGAGAAACTTTCCAGCTATTGGGGGAA 190
||| |||||||||||||||||||||| |||||||||||| |||||||| |
bm03784 151 ATCTAGACTTTGGTTTACATACAGGAAAAACTTTCCAGCCATTGGGGGGA 200
S R L W F T Y R K N F P A I G G T
201 ----+----*----+----*----+----*----+----*----+----* 250
G P T S D T G W G C M L R C G Q
mbh04274 191 CTGGCCCTACTTCAGACACAGGCTGGGGTTGCATGCTTCGGTGTGGACAG 240
| ||||| || || |||||||||||||| |||||||| ||||||||||||
bm03784 201 CAGGCCCCACCTCGGACACAGGCTGGGGCTGCATGCTGCGGTGTGGACAG 250
G P T S D T G W G C M L R C G Q
251 ----+----*----+----*----+----*----+----*----+----* 300
M I F A Q A L V C R H L G R D W R
mbh04274 241 ATGATCTTTGCCCAGGCCCTGGTATGCCGGCACTTAGGTCGAGATTGGAG 290
|||||||||||||| |||||||| ||||||||| |||| |||||||||||
bm03784 251 ATGATCTTTGCCCAAGCCCTGGTGTGCCGGCACCTAGGCCGAGATTGGAG 300
M I F A Q A L V C R H L G R D W R
301 ----+----*----+----*----+----*----+----*----+----* 350
W T Q R K R Q P D S Y F N V L N A
mbh04274 291 GTGGACTCAGCGGAAGAGGCAGCCTGACAGCTACTTTAATGTCCTCAATG 340
|||||| || ||||||||||||| ||||||||||| | |||||||| |
bm03784 301 GTGGACACAAAGGAAGAGGCAGCCAGACAGCTACTTCAGCGTCCTCAACG 350
W T Q R K R Q P D S Y F S V L N A
351 ----+----*----+----*----+----*----+----*----+----* 400
F L D R K D S Y Y S I H Q I A Q
mbh04274 341 CTTTCCTCGACAGGAAGGACAGCTACTATTCCATCCATCAGATAGCGCAA 390
| ||| |||||||||||||||| ||||| ||||| || ||||||||||||
bm03784 351 CATTCATCGACAGGAAGGACAGTTACTACTCCATTCACCAGATAGCGCAA 400
F I D R K D S Y Y S I H Q I A Q
401 ----+----*----+----*----+----*----+----*----+----* 450
M G V G E G K S I G Q W Y G P N T
mbh04274 391 ATGGGAGTTGGCGAAGGCAAGTCTATAGGCCAGTGGTACGGGCCGAACAC 440
||||||||||||||||||||||| |||||||||||||||||||| |||||
bm03784 401 ATGGGAGTTGGCGAAGGCAAGTCCATAGGCCAGTGGTACGGGCCCAACAC 450
M G V G E G K S I G Q W Y G P N T
451 ----+----*----+----*----+----*----+----*----+----* 500
V A Q V L K
mbh04274 441 TGTTGCCCAGGTCCTCAAGTACGTAATGAGCCCAGCCCTTCTGCTTCTTG 490
||| ||||||||||| |||
bm03784 451 TGTCGCCCAGGTCCTGAAG............................... 469
V A Q V L K
501 ----+----*----+----*----+----*----+----*----+----* 550
Q H E F S L A F T L L E Y L L A
mbh04274 491 GGGTCAGCATGAGTTCTCCTTGGCATTTACCCTCCTTGAGTACTTATTGG 540
||| || ||| | | | | | | | | | | | |
bm03784 470 ....AAGCTTGCTGTCTTCGATACGTGGAGCTCCTTGGCGGTCCACATTG 515
K L A V F D T W S S L A V H I A
551 ----+----*----+----*----+----*----+----*----+----* 600
Q D
mbh04274 541 CACAGGAACTAAGGTATTCCGATTCTTTGCTTATAGACCCAGGGGAGATC 590
|| |||
bm03784 516 CAATGGA........................................... 522
M D
601 ----+----*----+----*----+----*----+----*----+----* 650
N C S V I G
mbh04274 591 CCTGGGTGACTATGCCAATTGTTCTGTGATTGGGATTCATGTTTAGGTCA 640
||| | |||||| | |
bm03784 523 ...............CAACACTGTTGTGATGGAG................ 541
N T V V M E
651 ----+----*----+----*----+----*----+----*----+----* 700
Q I
mbh04274 641 GAGCCCTAGTGTGGCCCTGTCCTCTGTCTTGATATACAAATCCATCTGTA 690
|||||
bm03784 542 ....................................GAAATC........ 547
E I
701 ----+----*----+----*----+----*----+----*----+----* 750
M R V S * I W D H G S Y G T V S A
mbh04274 691 ATGAGGGTGTCTTAGATCTGGGACCATGGCAGTTATGGTACTGTATCTGC 740
| ||| ||| || | | | | | | |||| | | |
bm03784 548 AGAAGGTTGTGCAGGACCAGCGTTCCCTGTGCAGGCGCCACTGCGTTTCC 597
R R L C R T S V P C A G A T A F P
751 ----+----*----+----*----+----*----+----*----+----* 800
G A R A L Y L V G L S D T T * V
mbh04274 741 AGGTGCTAGAGCCCTCTACCTCGTGGGTTTGTCAGACACACCCACATAAG 790
| | | | || || | || || | | | | | | |
bm03784 598 TGCAGATTCCGACCGGCACTGCAACGGATTCCCTGCCGGA...GCTGAGG 644
A D S D R H C N G F P A G A E V
801 ----+----*----+----*----+----*----+----*----+----* 850
I S L P M L L R
mbh04274 791 TCATAAGCCTTCCCATGCTGTTGAGAATCTGTTAGAGTTTGTTCCTCATG 840
||| | | || || | ||||
bm03784 645 TCACCAACAGGCCGTCGCCATGGAGA........................ 670
T N R P S P W R
851 ----+----*----+----*----+----*----+----*----+----* 900
P L L L
mbh04274 841 AATGTTTGCCTATCCCCTCCTACCCTCTGTGCCTCCGTGGTTTCTTAAAG 890
||||| |||
bm03784 671 .............CCCCTGGTAC........................... 680
P L V L
901 ----+----*----+----*----+----*----+----*----+----* 950
mbh04274 891 ATTATTTTTGTATTATGAGTGTTTTTCTGCACATATGTCTGTTCACATCA 940
bm03784 681 .................................................. 681
951 ----+----*----+----*----+----*----+----*----+----* 1000
V R S L E
mbh04274 941 TACATGCAAAGCATGTAGGGAAGGCTAGAAGACATTGTTAGATCCCTGGA 990
|| | | |||||
bm03784 681 ..................................TTCTCATTCCCCTGCG 696
L I P L R
1001 ----+----*----+----*----+----*----+----*----+----* 1050
L E L T E N
mbh04274 991 GCTGGAGTTAACAGATGGTTGTTAGCTGCTCTGTGGGTGCTGGGAACTGA 1040
|||| | | || || |
bm03784 697 CCTGGGGCTCACGGA.................................CA 713
L G L T D I
1051 ----+----*----+----*----+----*----+----*----+----* 1100
P G S S E E Q Q V L C
mbh04274 1041 ACCCCGGGTCCTCTGCAAGAGCAGCAGGTGCTCTGACCACTGAGCCATTT 1090
| || | ||| | ||| || | || |||
bm03784 714 TCAACGAGGCCTACG.TGGAGACGCTGAAGCACTG............... 747
N E A Y V E T L K H C
1101 ----+----*----+----*----+----*----+----*----+----* 1150
L L V L L S L
mbh04274 1091 CCTCCTTGCTTGTGCTCCTCTCCCTGCAGTGTGTGTTTTGTTTTTGTTTT 1140
||| | ||| || ||||||
bm03784 748 ....CTTCATGATGCCCCAGTCCCTG........................ 769
F M M P Q S L
1151 ----+----*----+----*----+----*----+----*----+----* 1200
S A
mbh04274 1141 TGACCTGATTCACTTTTCCCTGTGGCTTTGTGCTTTAATATCTCAGTGCC 1190
| | |
bm03784 770 ............................................GGCGTC 775
G V
1201 ----+----*----+----*----+----*----+----*----+----* 1250
F R R L * T N V Q D S F G P I
mbh04274 1191 TTTAGAAGGCTCTGAACCAATGTCCAGGACTCATTCATGGAGGGCCCTAT 1240
| || || | || | ||| ||| || ||| |
bm03784 776 ATCGGAGGGAAGCCCAACAGCGCCCACTACTTCATC......GGCTACGT 819
I G G K P N S A H Y F I G Y V
1251 ----+----*----+----*----+----*----+----*----+----* 1300
P V G L I
mbh04274 1241 TCCTGTTGGGCTGAAAGCTAGTATCTCCCAAATATGTCTCTAGCTATGGT 1290
| || | ||| |
bm03784 820 TGGTGAGGAGCTCA.................................... 833
G E E L I
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mbh04274 1291 TTTTCCTGAATGTCCCCTTGCCACCCTACCCTGTGTCTGCAATGGCCATC 1340
bm03784 834 .................................................. 834
1351 ----+----*----+----*----+----*----+----*----+----* 1400
H L D P C T * C
mbh04274 1341 TCCTATAGGCTCCACCTAGACACTTGCTTTTTTTCCCCTGTACCTGATGC 1390
|| |||| || |||| |||
bm03784 834 ..........TCTACCTGGA..............CCCCCACACCACGCAG 859
Y L D P H T T Q
1401 ----+----*----+----*----+----*----+----*----+----* 1450
P V I Q A M A G C V S L V W F L S
mbh04274 1391 CCAGTCATCCCAGGCCATGGCTGGCTGTGTGTCCTTGGTTTGGTTTCTTA 1440
|||| | | || ||| | |||||| | | || | |
bm03784 860 CCAGCCGTG.GAGCCCACTGATGGCTGCTTCATCCCGGACGAGAGCTTCC 908
P A V E P T D G C F I P D E S F H
1451 ----+----*----+----*----+----*----+----*----+----* 1500
G M H T P I P F S V V Q V V
mbh04274 1441 GTGGCATGCACACCCTTTCTATCCCCTTTAGTGTCCTTGTTCAAGTTGTG 1490
|| |||| | | | || | | || || | | |||
bm03784 909 ACTGCCAGCACCCGC...CGTGCCGCATGAGCATC...GCGGAGCTTGAC 952
C Q H P P C R M S I A E L D
1501 ----+----*----+----*----+----*----+----*----+----* 1550
P C F T L L L L * Q N A
mbh04274 1491 CCTTGTTTTACTTTGCTGTTGCTGTGACAGAATGCCATGACCAAGGCAAC 1540
|| | | || || ||| | || ||| ||
bm03784 953 CCGTCCATCGCTGTGGGGTTTTTCTGTAAGACTG................ 986
P S I A V G F F C K T E
1551 ----+----*----+----*----+----*----+----*----+----* 1600
Q H F N L G C S K
mbh04274 1541 TTATAAAAAACAAAACCACAGCATTTCAATTTAGGGACTCACTGTTCCAA 1590
| | | |||||| || || |
bm03784 987 ................AAGATGACTTCAATGATTGG......TGCCAGCA 1014
D D F N D W C Q Q
1601 ----+----*----+----*----+----*----+----*----+----* 1650
V L D L E I H G G A L R Q A E
mbh04274 1591 AGTGTTAGACCTTGAAATTCATGGCAAGGAGCACTGCGGCAGGCGGGCAG 1640
||| | | || | | ||| ||| || |||| | | ||
bm03784 1015 AGTCAAAAAGCTGTCTCTGCTTGG..AGGTGCCCTGCCCATGTTTG..AG 1060
V K K L S L L G G A L P M F E
1651 ----+----*----+----*----+----*----+----*----+----* 1700
A L E Q * P R A Y I * F T S M K
mbh04274 1641 GCACTGGAGCAGTAGCCAAGAGCTTACATCTGATTCACCAGCATGAGGCA 1690
|||||||| |||| | | ||| | | | |||
bm03784 1061 CTGGTGGAGCAGCAGCCTTCACATCTGGCCTGCCCCGACGTCCTGA.... 1106
L V E Q Q P S H L A C P D V L N
1701 ----+----*----+----*----+----*----+----*----+----* 1750
M T * A F S Q S L
mbh04274 1691 GAGCAAGAGCTAATTGGAAATGACATAAGCTTTTGAAGTCTCAAAGCCTA 1740
| || | || || | ||| |
bm03784 1107 .................ACCTGTCCCTAGATTCT....TCTGATGTAGAG 1135
L S L D S S D V E
1751 ----+----*----+----*----+----*----+----*----+----* 1800
L P V A H F S S E A G P P I L V
mbh04274 1741 CTCCCCGTAGCACACTTC..CTCCAGCGAGGCCGGACCTCCTATCCTAGT 1788
| | | | | |||| ||| || | | | |||||
bm03784 1136 CGACTGGAAAGATTCTTCGACTCAGAAGATGAAGACTTTGAAATCCTGTC 1185
R L E R F F D S E D E D F E I L S
1801 ----+----*----+----*----+----*----+----*----+----* 1850
L S
mbh04274 1789 CCTTTCCAAACAGTTGTACCAAGTGAGGACCAAACCTTAGTATGTGAGTG 1838
||||| ||| | |
bm03784 1186 CCTTTGAAAATCCTGG.................................. 1201
L *
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mbh04274 1839 TAGTATGGGGGGGTCCTCTTTGCAATCACTGCACACCTTTAGCTTGTGGT 1888
| ||||| | | || || | | | | |||
bm03784 1202 ..GGTCGGGGGTGGCACCTGTGAGAGCCTGGGGCTCCT............ 1237
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mbh04274 1889 AGGATTTACGGGGCCGCCCCGGTGCTGCCACCTTTCACTGTGGCTCTGAG 1938
|| ||||| || | | ||| | | |
bm03784 1238 .........GGTGCCGCTGCGTTTCATCCA..........TCCCGCCCGC 1268
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mbh04274 1939 TAGCCTGACCAGGTCACCATCATGCTTTGGTCATATCTCTTGCCTCACTT 1988
| ||||| | ||| | | | | || ||| || |
bm03784 1269 TCGCCTGCCGAGGGCTGCGCCCCGTGCTG......CCTCCCCCCAGAGGG 1312
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mbh04274 1989 CTTTTCTGTCTTCACTGACAAAGAGCAGTCTCTTGGTGTTAGGATTTACA 2038
| | | | | | | ||| | || | ||| ||||
bm03784 1313 CCACCCGCTGTGCTCGTGGACTGAGGCTGCGCTGCCCGGGAGGCCTTACT 1362
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbh04274 2039 TCTTTCTGGAAATGGCAGGTCAGGCTGCTTATCCCTGCTTACTGTTCCTG 2088
||| || |||| |||| | | | | | | || |
bm03784 1363 GCTTGGTG...........TCAGACTGCCCAGCTCAGAGTGCCCGTCAGG 1401
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbh04274 2089 TCCCTGGCCTCCTCTGCTTTTGTAGCTAAATCCCTTTTCCTCTCTATTTG 2138
|| || |||| | | | ||
bm03784 1402 GCCTGTGC.....................ATCCGCACGCGGAGCCGTCTG 1430
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbh04274 2139 CTTGCTTCTTCTTGCTTGCCTTTACTGACATATCAGCCAAGGGAAGTGCT 2188
| | |||| | || | | | ||||| |
bm03784 1431 TTAGGAGCTTCCAGAGTGTTCTCTCGACACTGCCAGCCCCG......... 1471
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mbh04274 2189 GCTTTGTTCTCCTGGGTCTGTATCCTTGCTGCT....GTGGCAGGCTTAA 2234
| | | |||||| || ||| |||| | || || |
bm03784 1472 ..TGTTAGCACCTGGGCCTCAGTCCCACTTGCTCCCAGGCGCCGGTTCTG 1519
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mbh04274 2235 TGAGTAGTGAGAAAATACCAGCTCTCCTGAGCCCCTTTCAAGTTTCTCAT 2284
|| | || | || || || || || | || |||
bm03784 1520 TGGTTGGTTTGGAATTA...........AAGTCCTGTTTGAAGTTGTCAG 1558
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mbh04274 2285 TAACGAGAAGGGGCTTTGTGTGGTTTTCCTAGTGCAGTGGTTCTCAACTT 2334
|| ||| | ||| || | | ||| ||| | || ||
bm03784 1559 ACAC.AGACATGAATTTCTGGGCGCTCCCTGAGTCAGAGTCTCAGAA... 1604
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mbh04274 2335 ACAGGTATTCTGCATATCAGATATTTACATGACAACTCATAACAGTAACA 2384
bm03784 1605 .................................................. 1605
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mbh04274 2385 AAACCATAGTTATGTAGTAACAAGGAAAATAATTTTATGGTTAGGGGGTC 2434
|| ||| | |
bm03784 1605 .................................GACCTGTGCAGGCTGGC 1621
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mbh04274 2435 ACGACATGAGCAGCTGTATTAAAGGGTTGCAGCATTAGGAAGGCTGAGAA 2484
|| | |||| || | | | | || || |||| |
bm03784 1622 GTGAGAGGAGCGGCAG..CCACACTGCGGCCCCACGCCCAAGGACTGG.. 1667
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mbh04274 2485 CTGCTGCTCTAGA....GCCTTCCCAGCATCGGCTTCTTCTCTTACTAGA 2530
|||||||| || | | || | | | || ||||| | ||
bm03784 1668 ..GCTGCTCTCGAGGGGGGCGCGCCCACCGCTGTGTCCTCTCTGCCCAG. 1714
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mbh04274 2531 TGCACCAGGTCCTTGTAGCTTAGATCCTTGGTAATTGTCTCCATTGGGGA 2580
bm03784 1715 .................................................. 1715
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mbh04274 2581 ATGTCTCTTCTTGCCTTCTGTCTTCTCACTGATTGATAGGCCTTCTGCCC 2630
| ||| || | |||| || ||| |
bm03784 1715 ....CCTGGCTTACCAAGGGCTACCTCAGTGGGAGATGAG.......... 1750
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mbh04274 2631 CATCCCTGTAGCACCCAGTTTACATTTTTTCTACACAGTATGGCTGCTGT 2680
|| || | | | | | ||
bm03784 1751 ....GTTGGAGGAACGA........................AGGCGAGGT 1772
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mbh04274 2681 CTGCTCTTCTTTCAGAGCCATAAGTCTACAGCCATGCTTCCTCCTAATCA 2730
||| || | | | |||| | |||
bm03784 1773 TCCTCCTTGCTTTGGGGAGAAAAGTATTCAG................... 1803
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbh04274 2731 GTTGTGCTGTTCATTAGATTTCTGGGCTGTCAGTTCACAGTGTAAGGTGT 2780
| | |||| |
bm03784 1804 ..............................GAAGTGGGTGTGTGGGAAAC 1823
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbh04274 2781 TGGAAGAGAAGCTGCACAGCAGTGAGCTGGACCTGCCTCCATCCTGGTGA 2830
||||| ||||||| | ||| | | |||| | |
bm03784 1824 CTGAAGATGGCGTGCACAGGACACAGCGTGGGCGGCCTGGGCAGAAGGGC 1873
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbh04274 2831 GACCTGAGTTGCTATGCCAGCTAGGGGCTCCTGTCCATACTGTCTCCTGA 2880
| | | | || | ||| || |||| || | || |||
bm03784 1874 GGCTGGCTGTCCTGGAGCTGCTGCTGGAGCCTGCCCTCAGAGTGTCC... 1920
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbh04274 2881 CAAAGGGCAGCTGATGTCTTCGATGTACAACACTCAGCACACCTCCTGTT 2930
bm03784 1921 .................................................. 1921
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbh04274 2931 TGAGTCATTGGACAGATCCTTGACTTAAGCCTTGAAACTGCCTCAACTGT 2980
|
bm03784 1921 .............................................CTTTC 1925
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbh04274 2981 CACTGCTGTGGTGTGATGCTCATGCTGTACAAGGCTCATGGGAGTGTTCT 3030
|| |||||||| | || ||| | |||
bm03784 1926 CAGTGCTGTGGCATTCTGTGGCAGCTTCCCCAGG................ 1959
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbh04274 3031 CGCTTTCTGTAGGAAACTTGCTGTATTCGACACATGGAGTTCCTTGGCTG 3080
bm03784 1960 .................................................. 1960
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbh04274 3081 TTCACATAGCAATGGACAACACTGTGGTGATGGAGGAAATCAGAAGGTTA 3130
|||||||| |
bm03784 1960 ......................TGTGGTGACG.................. 1969
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbh04274 3131 TGCAGGGCCAACCTTCCCTGTGCTGGGGCGGCTGCACTTCCTACTGATTC 3180
|||| ||| | | ||| ||| |
bm03784 1970 ........................GGGGGGGCGGGGCCTCCACCTGTGAC 1995
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbh04274 3181 AGAGAGGCACTGTAATGGGTTCCCTG.CTGGAGCTGAAGTCACCAACAGG 3229
|| |||| ||| | || || | | || | | || |
bm03784 1996 AGCCAGGCTTGAGGGTGGACGGCGTGCCTCTCCCAGGAGCCTTCCCCATG 2045
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbh04274 3230 CCATCGGCTTGGAGACCACTAGTGCTTCTCATCCCTCTCCGCCTGGGACT 3279
| | | |||| || | || | |||| |||| || |
bm03784 2046 TCCTTGCCTTGCTGAGAA.......TTGCCCTCCCATGCCGCTGAGGTGT 2088
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbh04274 3280 GACAGACATCAATGAGGCCTATGTGGAGACGCTGAAGCACTGTTTCATGA 3329
| | || || | | | | ||| | ||
bm03784 2089 ..........TAGGTGGTTTAGGGCCAAAAGGGGAAAACCACTTG..... 2123
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbh04274 3330 TGCCCCAGTCCCTGGGTGTTATTGGAGGGAAGCCCAACAGTGCCCACTAC 3379
|||| ||||| | | | ||| | || ||
bm03784 2124 ......AGTCTTGTGGTGTGTGGTGGGCAGACACCACAGGGTGGCATCAC 2167
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mbh04274 3380 TTTATTGGCTATGTTGGGGAGGAGCTCATCTATCTGGACCCCCACACTAC 3429
| | | | | | ||| | | | | |||| | | |
bm03784 2168 CTGGTGGCATTTCCAGAACCTCAGCCCCGATTCCAGCACCCACCACCGCC 2217
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mbh04274 3430 ACAGCCTGCAGTGGAGCTGACTGACAGCTGCTTCATCCCCGACGAGAGCT 3479
| |||| || | ||||| | | ||||
bm03784 2218 TGACCCTG.............TGTAACCTGCTGTCCCGGGTCCCAGAGTG 2254
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbh04274 3480 TCCACTGCCAGCACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCG 3529
| ||||| ||
bm03784 2255 CACTCTGCC.....................................CCGC 2267
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbh04274 3530 TCCATTGCTGTGGGGTTTTTCTGTAAGAAGGAGGAAGACTTTAACGACTG 3579
| | ||||| |||| | | | | || | |||
bm03784 2268 TGCTCTGCTG.........CCTGTCCTGGGAAAGTATCTTTGCCCCACTA 2308
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbh04274 3580 GTGTCAGCAAGTCAAAAAGCTATCCCAGCTTGGAGGTGCCCTGCCCATGT 3629
| | || | ||| ||| |||
bm03784 2309 GGAAATGTAAACAGGAGGGCTTGGGGAGCGTGG................. 2341
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbh04274 3630 TTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTG 3679
bm03784 2342 .................................................. 2342
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbh04274 3680 AACCTGTCCCTAGACTCTTCTGATGTAGAGAGACTGGAGAGGTTTTTTGA 3729
||| |||| ||| || |||| | | | ||
bm03784 2342 ...........GCACTTTTCTCATGAGCAGCTACTGCGGCGTTGGCAGGA 2380
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbh04274 3730 CTCTGAGGATGAAGACTTTGAAATCTTATCCCTCTGAAAATCCTGGGGTT 3779
||| | | ||| | || | ||
bm03784 2381 CTC.......................GCTGCTGCTGCTGCTGCTTGTGTA 2407
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbh04274 3780 GGGGGATGGCCTCCATGGCCCTCATTGGGTGCTTTGAGAACCCAGACCTG 3829
|| | | | | ||| | | || | | | | |||
bm03784 2408 GGTCGGGGAGCCAGAGATCCCCGAGGACGCGCGCCGGACAGTCGGCACTG 2457
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbh04274 3830 CCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTGCC 3879
| | ||| || || | | || | ||| |||| | |
bm03784 2458 ACCGGCCCACCTGGTAGCAGAGGACACCCCCAGCCC..CCCAAGCATTGA 2505
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbh04274 3880 AAGTGCTGTTCACCTGTGCCACCTCTGTCCCGAGGGCCTGCTCTGCTCAT 3929
| ||| | | ||| | |||| ||| | | |
bm03784 2506 AGACAGTGTATTTCCTCGTATCCTTTCTCCCTTGGGTGTAGTTGGGGTGG 2555
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbh04274 3930 GGACCAAGGACTATGGTGCCTGGAGGCCTTAATGCTTGGAGTCAGACTGC 3979
||| ||| | || || | | | |||| | || |
bm03784 2556 GGAAGCAGG..GAAGGCTGGTGCGATCTCCATTCCTTG......GGCTCC 2597
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbh04274 3980 CTAAACCCCAACACAAAGGGCCTGTCCACATGAAGTCGCTCATCAGAAGG 4029
| || | ||| | | | || || | |
bm03784 2598 ACGTCCGAGTTCATGGTGCGCCGCTGTGCTGGGAGCTGCAGTGGTAATGT 2647
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbh04274 4030 CCTAGTCAGGAAGAGCAGTGGGTCAGGAGCTTCCAGAATTCTCCACTGGA 4079
| || || || ||| || || || ||
bm03784 2648 GTGGGACACCTTGACCAAAGGG...........GAGCTTTGTCTCGTGTG 2686
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbh04274 4080 TTCTGACACTGCCAGCCCTGGTCAGCACATCAGCTTTGGTTCTGCTTTCT 4129
|| ||| | | | | || ||| | | ||||
bm03784 2687 TTTTGAAAAAGGC...........TTAATGAAGAGAATGTTGTTCATTCT 2725
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbh04274 4130 CCTGGGCACCTGGGTCTGTGGTTTATTTGGAATTAAAGCCCTGTTTGAAG 4179
| | | | || || ||| | | | | |
bm03784 2726 TAGTAGTATAGTTTGCAATTCTTAATGGCAAATAATAAGTTTCAGTAGAA 2775
4201 ----+- 4206
mbh04274 4180 TTGTTT 4185
bm03784 2776 AAC... 2778