# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh04080.fasta.nr -Q ../query/mKIAA1737.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1737, 443 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915905 sequences Expectation_n fit: rho(ln(x))= 6.0402+/-0.000195; mu= 7.6722+/- 0.011 mean_var=106.2887+/-20.268, 0's: 30 Z-trim: 44 B-trim: 39 in 1/64 Lambda= 0.124403 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148670966|gb|EDL02913.1| RIKEN cDNA 2310044G17, ( 434) 2824 517.3 3e-144 gi|74141259|dbj|BAE35935.1| unnamed protein produc ( 432) 2806 514.0 2.8e-143 gi|74181815|dbj|BAE32612.1| unnamed protein produc ( 432) 2799 512.8 6.6e-143 gi|74203892|dbj|BAE28540.1| unnamed protein produc ( 429) 2708 496.4 5.4e-138 gi|20071351|gb|AAH26384.1| RIKEN cDNA 2310044G17 g ( 397) 2590 475.2 1.2e-131 gi|157382953|gb|ABV48911.1| clock interacting prot ( 399) 2067 381.4 2.2e-103 gi|126282267|ref|XP_001367421.1| PREDICTED: simila ( 401) 1642 305.1 2e-80 gi|26345342|dbj|BAC36322.1| unnamed protein produc ( 158) 1013 191.9 9.7e-47 gi|148670967|gb|EDL02914.1| RIKEN cDNA 2310044G17, ( 117) 752 144.9 9.7e-33 gi|148670968|gb|EDL02915.1| RIKEN cDNA 2310044G17, ( 146) 655 127.6 2e-27 gi|94734030|emb|CAK04086.1| novel protein [Danio r ( 519) 350 73.3 1.6e-10 gi|47230180|emb|CAG10594.1| unnamed protein produc ( 402) 300 64.2 6.5e-08 gi|171846504|gb|AAI61765.1| LOC100145786 protein [ ( 346) 292 62.8 1.6e-07 gi|189531111|ref|XP_685640.3| PREDICTED: similar t ( 513) 260 57.1 1.1e-05 gi|47217291|emb|CAG01514.1| unnamed protein produc ( 335) 254 55.9 1.7e-05 gi|47200353|emb|CAF89316.1| unnamed protein produc ( 118) 238 52.7 5.8e-05 >>gi|148670966|gb|EDL02913.1| RIKEN cDNA 2310044G17, iso (434 aa) initn: 2824 init1: 2824 opt: 2824 Z-score: 2746.2 bits: 517.3 E(): 3e-144 Smith-Waterman score: 2824; 100.000% identity (100.000% similar) in 434 aa overlap (10-443:1-434) 10 20 30 40 50 60 mKIAA1 GCHGVVGTGSRMRLLTRRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRL ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRMRLLTRRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ 360 370 380 390 400 410 430 440 mKIAA1 ASLTSGSSHSGSDLDTLSDHPDV ::::::::::::::::::::::: gi|148 ASLTSGSSHSGSDLDTLSDHPDV 420 430 >>gi|74141259|dbj|BAE35935.1| unnamed protein product [M (432 aa) initn: 2806 init1: 2806 opt: 2806 Z-score: 2728.7 bits: 514.0 E(): 2.8e-143 Smith-Waterman score: 2806; 99.769% identity (99.769% similar) in 432 aa overlap (12-443:1-432) 10 20 30 40 50 60 mKIAA1 GCHGVVGTGSRMRLLTRRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRL ::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MRLLTRRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRL 10 20 30 40 70 80 90 100 110 120 mKIAA1 SAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPS :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|741 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSRHVAKAPS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ 350 360 370 380 390 400 430 440 mKIAA1 ASLTSGSSHSGSDLDTLSDHPDV ::::::::::::::::::::::: gi|741 ASLTSGSSHSGSDLDTLSDHPDV 410 420 430 >>gi|74181815|dbj|BAE32612.1| unnamed protein product [M (432 aa) initn: 2799 init1: 2799 opt: 2799 Z-score: 2721.9 bits: 512.8 E(): 6.6e-143 Smith-Waterman score: 2799; 99.306% identity (99.769% similar) in 432 aa overlap (12-443:1-432) 10 20 30 40 50 60 mKIAA1 GCHGVVGTGSRMRLLTRRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRL ::::::::::::::::::::::::::::::::.:::::::::::::::: gi|741 MRLLTRRAGHGAATLALRVIHMQRVPVLRLPALLDMERKIPSRESPRRL 10 20 30 40 70 80 90 100 110 120 mKIAA1 SAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|741 SAKPGRGTEMKKLSRPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPS :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|741 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSILQGVPSLGAGGSPQTLQPVSSSHVAKAPS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ 350 360 370 380 390 400 430 440 mKIAA1 ASLTSGSSHSGSDLDTLSDHPDV ::::::::::::::::::::::: gi|741 ASLTSGSSHSGSDLDTLSDHPDV 410 420 430 >>gi|74203892|dbj|BAE28540.1| unnamed protein product [M (429 aa) initn: 2708 init1: 2708 opt: 2708 Z-score: 2633.7 bits: 496.4 E(): 5.4e-138 Smith-Waterman score: 2708; 100.000% identity (100.000% similar) in 415 aa overlap (29-443:15-429) 10 20 30 40 50 60 mKIAA1 GCHGVVGTGSRMRLLTRRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRL :::::::::::::::::::::::::::::::: gi|742 MLQVMTSYVIVVFHRVIHMQRVPVLRLPAILDMERKIPSRESPRRL 10 20 30 40 70 80 90 100 110 120 mKIAA1 SAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPV 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 PSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPS 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LSSSEPAKTGRVLSSPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LTLASPASPVCASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRR 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 FQNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQ 350 360 370 380 390 400 430 440 mKIAA1 ASLTSGSSHSGSDLDTLSDHPDV ::::::::::::::::::::::: gi|742 ASLTSGSSHSGSDLDTLSDHPDV 410 420 >>gi|20071351|gb|AAH26384.1| RIKEN cDNA 2310044G17 gene (397 aa) initn: 2590 init1: 2590 opt: 2590 Z-score: 2519.7 bits: 475.2 E(): 1.2e-131 Smith-Waterman score: 2590; 100.000% identity (100.000% similar) in 397 aa overlap (47-443:1-397) 20 30 40 50 60 70 mKIAA1 RRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRLSAKPGRGTEMKKLARP :::::::::::::::::::::::::::::: gi|200 MERKIPSRESPRRLSAKPGRGTEMKKLARP 10 20 30 80 90 100 110 120 130 mKIAA1 LGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDKRRQPSKAADTALPTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 LGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDKRRQPSKAADTALPTLP 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 PMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPVPSPVSSCQTGEKKSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 PMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPVPSPVSSCQTGEKKSES 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 RNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPSLSSSEPAKTGRVLSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 RNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERPGPSLSSSEPAKTGRVLSSP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPSLTLASPASPVCASDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 STPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPSLTLASPASPVCASDST 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRRFQNTLVVLHKSGLLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 LHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRRFQNTLVVLHKSGLLEI 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 TLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQASLTSGSSHSGSDLDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 TLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQASLTSGSSHSGSDLDT 340 350 360 370 380 390 440 mKIAA1 LSDHPDV ::::::: gi|200 LSDHPDV >>gi|157382953|gb|ABV48911.1| clock interacting protein (399 aa) initn: 2112 init1: 1153 opt: 2067 Z-score: 2012.4 bits: 381.4 E(): 2.2e-103 Smith-Waterman score: 2067; 79.449% identity (92.231% similar) in 399 aa overlap (47-443:1-399) 20 30 40 50 60 70 mKIAA1 RRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRLSAKPGRGTEMKKLARP :::: ::::. :::::::..:.:::: .: gi|157 MERKNPSREGSRRLSAKPSKGSEMKKASRQ 10 20 30 80 90 100 110 120 130 mKIAA1 LGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDKRRQPSKAADTALPTLP ::..::.::::::::::::::::::::::::::::::: .:::. : :: :. :.::: gi|157 LGLAAAESDKDSGFSDGSSECLSSAEQMESEDMLSALGWSREDRPRPSSKPANGAFPTLS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 PMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPVPSPVSSCQTGEKKSES ::::::.::::::::::::::::::::::::::::::. :::::: ::: :..:::::.: gi|157 PMVVMKNVLVKQGSSSSQLQSWTVQPSFEVISAQPQLLFLHPPVPPPVSPCHAGEKKSDS 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 RNYLPILNSYTKIAPHPGKRG--LNSEDRGTSGVSKKLCTERPGPSLSSSEPAKTGRVLS ::::::::::::::::::::: ..:.:: .:..::.:::: ::.::. ::.::: gi|157 RNYLPILNSYTKIAPHPGKRGPSRSAEERGDGGMQKKVCTERLGPGLSAREPTKTGAGPP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 SPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPSLTLASPASPVCASD .: ::.: ..::.:::.::::::: :::::::::::::::::::::::.::::::::::: gi|157 QPPTPVPLGAKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSLTFASPASPVCASD 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 STLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRRFQNTLVVLHKSGLL :::::.:::::::: .:::.: ::::::.::::: : ::::.:::::::::::::::::: gi|157 STLHGVESSSPLSPPAASYSSTLWAAEHFCRSPDGFPEQRQSKHRRFQNTLVVLHKSGLL 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 EITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQASLTSGSSHSGSDL :::::::::::::::::.:::::::::..::::::::::::::.:::::::::.:.:::: gi|157 EITLKTKELIRQNQATQVELDQLKEQTRLFIEATKSRAPQAWARLQASLTSGSGHAGSDL 340 350 360 370 380 390 440 mKIAA1 DTLSDHPDV ...:..::. gi|157 QAFSEQPDM >>gi|126282267|ref|XP_001367421.1| PREDICTED: similar to (401 aa) initn: 1482 init1: 780 opt: 1642 Z-score: 1600.1 bits: 305.1 E(): 2e-80 Smith-Waterman score: 1642; 66.169% identity (84.328% similar) in 402 aa overlap (47-443:1-401) 20 30 40 50 60 70 mKIAA1 RRAGHGAATLALRVIHMQRVPVLRLPAILDMERKIPSRESPRRLSAKPGRGTEMKKLARP :::: : : ::::: :: :. : :..:. gi|126 MERKDPPRSSPRRLLAKLGKVMERKQMAHH 10 20 30 80 90 100 110 120 130 mKIAA1 LGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKREDKRRQPSKAADTALPTLP ....::::::::::::::::::::::::.:::::..:. . :: :: : :....:.: gi|126 FNMAAADSDKDSGFSDGSSECLSSAEQMDSEDMLNTLSWHGEDGPRQNSTIASNSFPALS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 PMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLHPPVPSPVSSCQTGEKKSES ::::::.:::::: .::.::::::::::::::.:::: ::: :: ::: .::::..: gi|126 PMVVMKNVLVKQGRNSSHLQSWTVQPSFEVISTQPQLVFLHPSVPPPVSPYPAGEKKNDS 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 RNYLPILNSYTKIAPHPGKRGL--NSEDRGTSGVSKKLCTERPGPSLSSSEPAKTGRVLS :::::::::::::::::::::: : :.:: ....:..:::: ::::. :.::. . : gi|126 RNYLPILNSYTKIAPHPGKRGLALNPEERGETSMQKRVCTERHRTSLSSTGPTKTSILPS 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 SPSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTL---QPVSSSHVAKAPSLTLASPASPVC .::::.:::.::..::. :.. :: :. : .:. : : :: .::::.::.::::::. gi|126 DPSTPVPPSTKLAQDSVRQSLSSLVASRSLRTVPDSQEVLSSTMAKAPNLTFASPASPLG 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 ASDSTLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRRFQNTLVVLHKS .:::::::::: ::: ::: :. : :...::.::. : ::::.:::::.::::.::.: gi|126 SSDSTLHGLESPMPLSMLSAPYSPP-GAGDQLCHSPETFLEQRQSKHRRFRNTLVILHRS 280 290 300 310 320 380 390 400 410 420 430 mKIAA1 GLLEITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQASLTSGSSHSG :::::::::::::::::::: :::.::::::...::::. :::::::::::::: :. .: gi|126 GLLEITLKTKELIRQNQATQIELDRLKEQTQLLMEATKGNAPQAWAKLQASLTSVSNPTG 330 340 350 360 370 380 440 mKIAA1 SDLDTLSDHPDV : ..::: : .. gi|126 SHFETLSAHTNI 390 400 >>gi|26345342|dbj|BAC36322.1| unnamed protein product [M (158 aa) initn: 1013 init1: 1013 opt: 1013 Z-score: 995.5 bits: 191.9 E(): 9.7e-47 Smith-Waterman score: 1013; 99.367% identity (100.000% similar) in 158 aa overlap (286-443:1-158) 260 270 280 290 300 310 mKIAA1 PSTPAPPSSKLTEDSTLQGVPSLGAGGSPQTLQPVSSSHVAKAPSLTLASPASPVCASDS .::::::::::::::::::::::::::::: gi|263 SLQPVSSSHVAKAPSLTLASPASPVCASDS 10 20 30 320 330 340 350 360 370 mKIAA1 TLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRRFQNTLVVLHKSGLLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TLHGLESSSPLSPLSASYTSPLWAAEHLCRSPDIFSEQRQNKHRRFQNTLVVLHKSGLLE 40 50 60 70 80 90 380 390 400 410 420 430 mKIAA1 ITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQASLTSGSSHSGSDLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ITLKTKELIRQNQATQAELDQLKEQTQMFIEATKSRAPQAWAKLQASLTSGSSHSGSDLD 100 110 120 130 140 150 440 mKIAA1 TLSDHPDV :::::::: gi|263 TLSDHPDV >>gi|148670967|gb|EDL02914.1| RIKEN cDNA 2310044G17, iso (117 aa) initn: 752 init1: 752 opt: 752 Z-score: 744.1 bits: 144.9 E(): 9.7e-33 Smith-Waterman score: 752; 97.436% identity (99.145% similar) in 117 aa overlap (88-204:1-117) 60 70 80 90 100 110 mKIAA1 RRLSAKPGRGTEMKKLARPLGVVAADSDKDSGFSDGSSECLSSAEQMESEDMLSALGCKR .: .:::::::::::::::::::::::::: gi|148 NGSADGSSECLSSAEQMESEDMLSALGCKR 10 20 30 120 130 140 150 160 170 mKIAA1 EDKRRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EDKRRQPSKAADTALPTLPPMVVMKSVLVKQGSSSSQLQSWTVQPSFEVISAQPQLFVLH 40 50 60 70 80 90 180 190 200 210 220 230 mKIAA1 PPVPSPVSSCQTGEKKSESRNYLPILNSYTKIAPHPGKRGLNSEDRGTSGVSKKLCTERP ::::::::::::::::::::::::::: gi|148 PPVPSPVSSCQTGEKKSESRNYLPILN 100 110 >>gi|148670968|gb|EDL02915.1| RIKEN cDNA 2310044G17, iso (146 aa) initn: 652 init1: 652 opt: 655 Z-score: 648.7 bits: 127.6 E(): 2e-27 Smith-Waterman score: 655; 84.127% identity (87.302% similar) in 126 aa overlap (2-127:29-146) 10 20 30 mKIAA1 GCHGVVGTGSRMRLLTRRAGHGAATLALRVIHM : :. .: .: : ::. ::::: gi|148 DLALHTITRKTGQDGGEALRANHREEHRCGESVALSSVLRGLPARAA--------RVIHM 10 20 30 40 50 40 50 60 70 80 90 mKIAA1 QRVPVLRLPAILDMERKIPSRESPRRLSAKPGRGTEMKKLARPLGVVAADSDKDSGFSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QRVPVLRLPAILDMERKIPSRESPRRLSAKPGRGTEMKKLARPLGVVAADSDKDSGFSDG 60 70 80 90 100 110 100 110 120 130 140 150 mKIAA1 SSECLSSAEQMESEDMLSALGCKREDKRRQPSKAADTALPTLPPMVVMKSVLVKQGSSSS :::::::::::::::::::::::::::::::::: gi|148 SSECLSSAEQMESEDMLSALGCKREDKRRQPSKA 120 130 140 160 170 180 190 200 210 mKIAA1 QLQSWTVQPSFEVISAQPQLFVLHPPVPSPVSSCQTGEKKSESRNYLPILNSYTKIAPHP 443 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 15:36:58 2009 done: Sun Mar 15 15:43:46 2009 Total Scan time: 918.980 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]