# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh03993.fasta.nr -Q ../query/mKIAA1976.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1976, 328 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920994 sequences Expectation_n fit: rho(ln(x))= 4.8611+/-0.000181; mu= 11.5109+/- 0.010 mean_var=64.4404+/-12.473, 0's: 21 Z-trim: 23 B-trim: 0 in 0/66 Lambda= 0.159770 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|34784159|gb|AAH58084.1| Unc5a protein [Mus musc ( 842) 1475 348.7 2.4e-93 gi|54036593|sp|Q8K1S4.1|UNC5A_MOUSE RecName: Full= ( 898) 1475 348.7 2.5e-93 gi|148709219|gb|EDL41165.1| unc-5 homolog A (C. el ( 920) 1475 348.7 2.5e-93 gi|149039901|gb|EDL94017.1| unc-5 homolog A (C. el ( 797) 1465 346.4 1.1e-92 gi|54036536|sp|O08721.1|UNC5A_RAT RecName: Full=Ne ( 898) 1465 346.4 1.2e-92 gi|73953289|ref|XP_865859.1| PREDICTED: similar to ( 842) 1446 342.0 2.4e-91 gi|73953281|ref|XP_546213.2| PREDICTED: similar to ( 898) 1446 342.0 2.6e-91 gi|73953285|ref|XP_865834.1| PREDICTED: similar to ( 907) 1446 342.0 2.6e-91 gi|73953287|ref|XP_865845.1| PREDICTED: similar to ( 909) 1446 342.0 2.6e-91 gi|73953283|ref|XP_865818.1| PREDICTED: similar to ( 910) 1446 342.0 2.6e-91 gi|194219563|ref|XP_001498611.2| PREDICTED: simila ( 900) 1445 341.8 3e-91 gi|194668437|ref|XP_582427.4| PREDICTED: similar t (1119) 1441 340.9 6.7e-91 gi|114603613|ref|XP_518123.2| PREDICTED: similar t ( 994) 1438 340.2 9.9e-91 gi|109079885|ref|XP_001093654.1| PREDICTED: simila ( 943) 1436 339.7 1.3e-90 gi|115333988|gb|AAI22557.1| UNC5A protein [Homo sa ( 531) 1418 335.4 1.5e-89 gi|40226528|gb|AAH09333.2| UNC5A protein [Homo sap ( 541) 1418 335.4 1.5e-89 gi|54036578|sp|Q6ZN44.2|UNC5A_HUMAN RecName: Full= ( 842) 1418 335.6 2.1e-89 gi|187956818|gb|AAI57825.1| Unc-5 homolog A (C. el ( 842) 1418 335.6 2.1e-89 gi|119605456|gb|EAW85050.1| unc-5 homolog A (C. el ( 887) 1418 335.6 2.2e-89 gi|119605457|gb|EAW85051.1| unc-5 homolog A (C. el ( 927) 1418 335.6 2.3e-89 gi|134025624|gb|AAI36027.1| Unc5a protein [Xenopus ( 895) 1078 257.2 8.7e-66 gi|161611618|gb|AAI55846.1| Zgc:175190 protein [Da ( 860) 992 237.4 7.8e-60 gi|47222982|emb|CAF99138.1| unnamed protein produc ( 893) 992 237.4 8.1e-60 gi|224049433|ref|XP_002192187.1| PREDICTED: unc-5 ( 979) 845 203.5 1.4e-49 gi|74223927|dbj|BAE23847.1| unnamed protein produc ( 246) 834 200.5 2.7e-49 gi|74211267|dbj|BAE37698.1| unnamed protein produc ( 876) 838 201.9 3.9e-49 gi|149026097|gb|EDL82340.1| unc-5 homolog C (C. el ( 931) 838 201.9 4e-49 gi|54036538|sp|Q761X5.1|UNC5C_RAT RecName: Full=Ne ( 931) 838 201.9 4e-49 gi|54036539|sp|O08747.1|UNC5C_MOUSE RecName: Full= ( 931) 838 201.9 4e-49 gi|74189886|dbj|BAE24575.1| unnamed protein produc ( 950) 838 201.9 4.1e-49 gi|74210877|dbj|BAE25058.1| unnamed protein produc ( 950) 838 201.9 4.1e-49 gi|148680122|gb|EDL12069.1| unc-5 homolog C (C. el ( 988) 838 201.9 4.2e-49 gi|54036585|sp|Q7T2Z5.1|UNC5C_CHICK RecName: Full= ( 931) 836 201.4 5.6e-49 gi|26327503|dbj|BAC27495.1| unnamed protein produc ( 950) 835 201.2 6.6e-49 gi|54036590|sp|Q8JGT4.1|UNC5B_XENLA RecName: Full= ( 943) 829 199.8 1.7e-48 gi|114595234|ref|XP_001164867.1| PREDICTED: unc5C ( 875) 827 199.3 2.2e-48 gi|119626466|gb|EAX06061.1| unc-5 homolog C (C. el ( 931) 827 199.4 2.3e-48 gi|114595230|ref|XP_526636.2| PREDICTED: unc5C iso ( 931) 827 199.4 2.3e-48 gi|114595232|ref|XP_001164902.1| PREDICTED: unc5C ( 940) 827 199.4 2.4e-48 gi|114595238|ref|XP_001164977.1| PREDICTED: unc5C ( 951) 827 199.4 2.4e-48 gi|114595236|ref|XP_001164941.1| PREDICTED: unc5C ( 951) 827 199.4 2.4e-48 gi|149701735|ref|XP_001497590.1| PREDICTED: simila ( 931) 825 198.9 3.2e-48 gi|119893614|ref|XP_612601.3| PREDICTED: similar t ( 930) 824 198.7 3.8e-48 gi|158254432|dbj|BAF83189.1| unnamed protein produ ( 931) 823 198.4 4.4e-48 gi|16933525|ref|NP_003719.2| unc5C [Homo sapiens] ( 931) 823 198.4 4.4e-48 gi|54036550|sp|O95185.1|UNC5C_HUMAN RecName: Full= ( 931) 823 198.4 4.4e-48 gi|126330684|ref|XP_001365211.1| PREDICTED: simila ( 931) 822 198.2 5.2e-48 gi|81230838|gb|ABB59710.1| Unc5C [Danio rerio] ( 948) 822 198.2 5.3e-48 gi|47226400|emb|CAG08416.1| unnamed protein produc ( 831) 821 197.9 5.6e-48 gi|74001968|ref|XP_861879.1| PREDICTED: similar to ( 931) 816 196.8 1.4e-47 >>gi|34784159|gb|AAH58084.1| Unc5a protein [Mus musculus (842 aa) initn: 1474 init1: 1474 opt: 1475 Z-score: 1832.3 bits: 348.7 E(): 2.4e-93 Smith-Waterman score: 1628; 56.781% identity (57.143% similar) in 553 aa overlap (10-328:290-842) 10 20 30 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILL . : : .::::::::::::::::::::::: gi|347 HWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCLHTSSGPEDVALYIGLVAVAVCLILL 260 270 280 290 300 310 40 50 60 70 80 90 mKIAA1 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG 320 330 340 350 360 370 100 110 mKIAA1 SLCPRQDGPSPKFQL--------------------------------------------- ::::::::::::::: gi|347 SLCPRQDGPSPKFQLSNGHLLSPLGSGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGT 380 390 400 410 420 430 mKIAA1 ------------------------------------------------------------ gi|347 SNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLL 440 450 460 470 480 490 mKIAA1 ------------------------------------------------------------ gi|347 SPIVSCGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEESPSHLY 500 510 520 530 540 550 mKIAA1 ------------------------------------------------------------ gi|347 YCQLEAGACYVFTEQLGRFALVGEALSVAATKRLRLLLFAPVACTSLEYNIRVYCLHDTH 560 570 580 590 600 610 120 130 140 150 160 mKIAA1 ---------EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 DALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH 620 630 640 650 660 670 170 180 190 200 210 220 mKIAA1 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE 680 690 700 710 720 730 230 240 250 260 270 280 mKIAA1 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP 740 750 760 770 780 790 290 300 310 320 mKIAA1 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::::::::::::::::::::::::::::::::: gi|347 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC 800 810 820 830 840 >>gi|54036593|sp|Q8K1S4.1|UNC5A_MOUSE RecName: Full=Netr (898 aa) initn: 1510 init1: 1474 opt: 1475 Z-score: 1831.9 bits: 348.7 E(): 2.5e-93 Smith-Waterman score: 1628; 56.781% identity (57.143% similar) in 553 aa overlap (10-328:346-898) 10 20 30 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILL . : : .::::::::::::::::::::::: gi|540 HWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCLHTSSGPEDVALYIGLVAVAVCLILL 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA1 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG 380 390 400 410 420 430 100 110 mKIAA1 SLCPRQDGPSPKFQL--------------------------------------------- ::::::::::::::: gi|540 SLCPRQDGPSPKFQLSNGHLLSPLGSGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGT 440 450 460 470 480 490 mKIAA1 ------------------------------------------------------------ gi|540 SNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLL 500 510 520 530 540 550 mKIAA1 ------------------------------------------------------------ gi|540 SPIVSCGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEESPSHLY 560 570 580 590 600 610 mKIAA1 ------------------------------------------------------------ gi|540 YCQLEAGACYVFTEQLGRFALVGEALSVAATKRLRLLLFAPVACTSLEYNIRVYCLHDTH 620 630 640 650 660 670 120 130 140 150 160 mKIAA1 ---------EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 DALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH 680 690 700 710 720 730 170 180 190 200 210 220 mKIAA1 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE 740 750 760 770 780 790 230 240 250 260 270 280 mKIAA1 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP 800 810 820 830 840 850 290 300 310 320 mKIAA1 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::::::::::::::::::::::::::::::::: gi|540 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC 860 870 880 890 >>gi|148709219|gb|EDL41165.1| unc-5 homolog A (C. elegan (920 aa) initn: 1474 init1: 1474 opt: 1475 Z-score: 1831.8 bits: 348.7 E(): 2.5e-93 Smith-Waterman score: 1628; 56.781% identity (57.143% similar) in 553 aa overlap (10-328:368-920) 10 20 30 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILL . : : .::::::::::::::::::::::: gi|148 HWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCLHTSSGPEDVALYIGLVAVAVCLILL 340 350 360 370 380 390 40 50 60 70 80 90 mKIAA1 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG 400 410 420 430 440 450 100 110 mKIAA1 SLCPRQDGPSPKFQL--------------------------------------------- ::::::::::::::: gi|148 SLCPRQDGPSPKFQLSNGHLLSPLGSGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGT 460 470 480 490 500 510 mKIAA1 ------------------------------------------------------------ gi|148 SNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLL 520 530 540 550 560 570 mKIAA1 ------------------------------------------------------------ gi|148 SPIVSCGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEESPSHLY 580 590 600 610 620 630 mKIAA1 ------------------------------------------------------------ gi|148 YCQLEAGACYVFTEQLGRFALVGEALSVAATKRLRLLLFAPVACTSLEYNIRVYCLHDTH 640 650 660 670 680 690 120 130 140 150 160 mKIAA1 ---------EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH 700 710 720 730 740 750 170 180 190 200 210 220 mKIAA1 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE 760 770 780 790 800 810 230 240 250 260 270 280 mKIAA1 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP 820 830 840 850 860 870 290 300 310 320 mKIAA1 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::::::::::::::::::::::::::::::::: gi|148 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC 880 890 900 910 920 >>gi|149039901|gb|EDL94017.1| unc-5 homolog A (C. elegan (797 aa) initn: 1464 init1: 1464 opt: 1465 Z-score: 1820.2 bits: 346.4 E(): 1.1e-92 Smith-Waterman score: 1595; 55.515% identity (56.962% similar) in 553 aa overlap (10-328:245-797) 10 20 30 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILL . : : ..:::::::::::::::::::.:: gi|149 HWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCLHTASGPEDVALYIGLVAVAVCLFLL 220 230 240 250 260 270 40 50 60 70 80 90 mKIAA1 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG ::.: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLALGLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG 280 290 300 310 320 330 100 110 mKIAA1 SLCPRQDGPSPKFQL--------------------------------------------- ::::::::::::::: gi|149 SLCPRQDGPSPKFQLSNGHLLSPLGSGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGT 340 350 360 370 380 390 mKIAA1 ------------------------------------------------------------ gi|149 SNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLL 400 410 420 430 440 450 mKIAA1 ------------------------------------------------------------ gi|149 SPVVSCGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEESPSHLY 460 470 480 490 500 510 mKIAA1 ------------------------------------------------------------ gi|149 YCQLEAGACYVFTEQLGRFALVGEALSVAATKRLRLLLFAPVACTSLEYNIRVYCLHDTH 520 530 540 550 560 570 120 130 140 150 160 mKIAA1 ---------EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH 580 590 600 610 620 630 170 180 190 200 210 220 mKIAA1 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE :::::::::::::::::.:::::::::::::::::::::::::::::::::::::.:::: gi|149 IWNGTQQYLHCTFTLERINASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAELLALE 640 650 660 670 680 690 230 240 250 260 270 280 mKIAA1 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|149 SEGGVPALVGPSAFKIPFLIRQKIIASLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP 700 710 720 730 740 750 290 300 310 320 mKIAA1 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::::::::::::::::::::::::::::::::: gi|149 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC 760 770 780 790 >>gi|54036536|sp|O08721.1|UNC5A_RAT RecName: Full=Netrin (898 aa) initn: 1464 init1: 1464 opt: 1465 Z-score: 1819.5 bits: 346.4 E(): 1.2e-92 Smith-Waterman score: 1573; 55.154% identity (56.600% similar) in 553 aa overlap (10-328:346-898) 10 20 30 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILL . : : ..: :::::::::::::::::.:: gi|540 HWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCLHTASCPEDVALYIGLVAVAVCLFLL 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA1 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG ::.: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 LLALGLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG 380 390 400 410 420 430 100 110 mKIAA1 SLCPRQDGPSPKFQL--------------------------------------------- ::: ::::::::::: gi|540 SLCSRQDGPSPKFQLSNGHLLSPLGSGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGT 440 450 460 470 480 490 mKIAA1 ------------------------------------------------------------ gi|540 SNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLL 500 510 520 530 540 550 mKIAA1 ------------------------------------------------------------ gi|540 SPVVSCGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEESPSHLY 560 570 580 590 600 610 mKIAA1 ------------------------------------------------------------ gi|540 YCQLEAGACYVFTEQLGRFALVGEALSVAATKRLRLLLFAPVACTSLEYNIRVYCLHDTH 620 630 640 650 660 670 120 130 140 150 160 mKIAA1 ---------EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 DALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH 680 690 700 710 720 730 170 180 190 200 210 220 mKIAA1 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE :::::::::::::::::.:::::::::::::::::::::::::::::::::::::.:::: gi|540 IWNGTQQYLHCTFTLERINASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAELLALE 740 750 760 770 780 790 230 240 250 260 270 280 mKIAA1 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|540 SEGGVPALVGPSAFKIPFLIRQKIIASLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP 800 810 820 830 840 850 290 300 310 320 mKIAA1 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::::::::::::::::::::::::::::::::: gi|540 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC 860 870 880 890 >>gi|73953289|ref|XP_865859.1| PREDICTED: similar to net (842 aa) initn: 1484 init1: 1445 opt: 1446 Z-score: 1796.2 bits: 342.0 E(): 2.4e-91 Smith-Waterman score: 1551; 54.069% identity (56.420% similar) in 553 aa overlap (10-328:290-842) 10 20 30 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILL . : . ..: :::::::.::.::::::.:: gi|739 HWRSRECSDPAPRNGGEECRGTDLDTRNCTSDLCVHTASRPEDVALYVGLIAVAVCLLLL 260 270 280 290 300 310 40 50 60 70 80 90 mKIAA1 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG ::::.:.:::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|739 LLVLILVYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTCQG 320 330 340 350 360 370 100 110 mKIAA1 SLCPRQDGPSPKFQL--------------------------------------------- :::::::: :::::: gi|739 SLCPRQDGTSPKFQLANGHLLSPLSGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGT 380 390 400 410 420 430 mKIAA1 ------------------------------------------------------------ gi|739 SNMTYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLL 440 450 460 470 480 490 mKIAA1 ------------------------------------------------------------ gi|739 SPIVSCGPPGVLLTRPVILAMDHCGEPCPESWSLRLKKQSCEGSWEDVLHLGEEAPSHLY 500 510 520 530 540 550 mKIAA1 ------------------------------------------------------------ gi|739 YCQLEAGACYVFTEQLGRFALVGEALSVAATKRLKLLLFAPVACTSLEYNIRVYCLHDTH 560 570 580 590 600 610 120 130 140 150 160 mKIAA1 ---------EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH 620 630 640 650 660 670 170 180 190 200 210 220 mKIAA1 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE :::::::::::.::::::. :::::::::::::::::::::::::::::::::::.:::: gi|739 IWNGTQQYLHCAFTLERVSPSTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAELLALE 680 690 700 710 720 730 230 240 250 260 270 280 mKIAA1 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP 740 750 760 770 780 790 290 300 310 320 mKIAA1 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::::::::.:::::::::::::::::::::::: gi|739 TAMILNLWEARHFPNGNLSQLAAAVAGLGQPDAGLFTVSEAEC 800 810 820 830 840 >>gi|73953281|ref|XP_546213.2| PREDICTED: similar to net (898 aa) initn: 1491 init1: 1445 opt: 1446 Z-score: 1795.8 bits: 342.0 E(): 2.6e-91 Smith-Waterman score: 1551; 54.069% identity (56.420% similar) in 553 aa overlap (10-328:346-898) 10 20 30 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILL . : . ..: :::::::.::.::::::.:: gi|739 HWRSRECSDPAPRNGGEECRGTDLDTRNCTSDLCVHTASRPEDVALYVGLIAVAVCLLLL 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA1 LLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQG ::::.:.:::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|739 LLVLILVYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTCQG 380 390 400 410 420 430 100 110 mKIAA1 SLCPRQDGPSPKFQL--------------------------------------------- :::::::: :::::: gi|739 SLCPRQDGTSPKFQLANGHLLSPLSGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGT 440 450 460 470 480 490 mKIAA1 ------------------------------------------------------------ gi|739 SNMTYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLL 500 510 520 530 540 550 mKIAA1 ------------------------------------------------------------ gi|739 SPIVSCGPPGVLLTRPVILAMDHCGEPCPESWSLRLKKQSCEGSWEDVLHLGEEAPSHLY 560 570 580 590 600 610 mKIAA1 ------------------------------------------------------------ gi|739 YCQLEAGACYVFTEQLGRFALVGEALSVAATKRLKLLLFAPVACTSLEYNIRVYCLHDTH 620 630 640 650 660 670 120 130 140 150 160 mKIAA1 ---------EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYH 680 690 700 710 720 730 170 180 190 200 210 220 mKIAA1 IWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALE :::::::::::.::::::. :::::::::::::::::::::::::::::::::::.:::: gi|739 IWNGTQQYLHCAFTLERVSPSTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAELLALE 740 750 760 770 780 790 230 240 250 260 270 280 mKIAA1 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSP 800 810 820 830 840 850 290 300 310 320 mKIAA1 TAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::::::::.:::::::::::::::::::::::: gi|739 TAMILNLWEARHFPNGNLSQLAAAVAGLGQPDAGLFTVSEAEC 860 870 880 890 >>gi|73953285|ref|XP_865834.1| PREDICTED: similar to net (907 aa) initn: 1491 init1: 1445 opt: 1446 Z-score: 1795.7 bits: 342.0 E(): 2.6e-91 Smith-Waterman score: 1534; 54.613% identity (56.273% similar) in 542 aa overlap (21-328:366-907) 10 20 30 40 50 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILLLLVLVLIYCRK ::::::.::.::::::.::::::.:.:::: gi|739 GTDLDTRNCTSDLCVHSESSLPQDRPLHPQEDVALYVGLIAVAVCLLLLLLVLILVYCRK 340 350 360 370 380 390 60 70 80 90 100 110 mKIAA1 KEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQGSLCPRQDGPSP :::::::::::::::::::::::::::::::::::::::::::::: :::::::::: :: gi|739 KEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTCQGSLCPRQDGTSP 400 410 420 430 440 450 mKIAA1 KFQL-------------------------------------------------------- :::: gi|739 KFQLANGHLLSPLSGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGTSNMTYGTFNFL 460 470 480 490 500 510 mKIAA1 ------------------------------------------------------------ gi|739 GGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLLSPIVSCGPPGV 520 530 540 550 560 570 mKIAA1 ------------------------------------------------------------ gi|739 LLTRPVILAMDHCGEPCPESWSLRLKKQSCEGSWEDVLHLGEEAPSHLYYCQLEAGACYV 580 590 600 610 620 630 mKIAA1 ----------------------------------------------------------EK :: gi|739 FTEQLGRFALVGEALSVAATKRLKLLLFAPVACTSLEYNIRVYCLHDTHDALKEVVQLEK 640 650 660 670 680 690 120 130 140 150 160 170 mKIAA1 QLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHIWNGTQQYLHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHIWNGTQQYLHC 700 710 720 730 740 750 180 190 200 210 220 230 mKIAA1 TFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALESEGGVPALVGP .::::::. :::::::::::::::::::::::::::::::::::.::::::::::::::: gi|739 AFTLERVSPSTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAELLALESEGGVPALVGP 760 770 780 790 800 810 240 250 260 270 280 290 mKIAA1 SAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEAR 820 830 840 850 860 870 300 310 320 mKIAA1 HFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC :::::::.:::::::::::::::::::::::: gi|739 HFPNGNLSQLAAAVAGLGQPDAGLFTVSEAEC 880 890 900 >>gi|73953287|ref|XP_865845.1| PREDICTED: similar to net (909 aa) initn: 1491 init1: 1445 opt: 1446 Z-score: 1795.7 bits: 342.0 E(): 2.6e-91 Smith-Waterman score: 1535; 54.512% identity (56.169% similar) in 543 aa overlap (20-328:367-909) 10 20 30 40 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILLLLVLVLIYCR : :::::.::.::::::.::::::.:.::: gi|739 TDLDTRNCTSDLCVHSESSLPQDRTPTLEIPGDVALYVGLIAVAVCLLLLLLVLILVYCR 340 350 360 370 380 390 50 60 70 80 90 100 mKIAA1 KKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQGSLCPRQDGPS ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: : gi|739 KKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTCQGSLCPRQDGTS 400 410 420 430 440 450 110 mKIAA1 PKFQL------------------------------------------------------- ::::: gi|739 PKFQLANGHLLSPLSGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGTSNMTYGTFNF 460 470 480 490 500 510 mKIAA1 ------------------------------------------------------------ gi|739 LGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLLSPIVSCGPPG 520 530 540 550 560 570 mKIAA1 ------------------------------------------------------------ gi|739 VLLTRPVILAMDHCGEPCPESWSLRLKKQSCEGSWEDVLHLGEEAPSHLYYCQLEAGACY 580 590 600 610 620 630 mKIAA1 -----------------------------------------------------------E : gi|739 VFTEQLGRFALVGEALSVAATKRLKLLLFAPVACTSLEYNIRVYCLHDTHDALKEVVQLE 640 650 660 670 680 690 120 130 140 150 160 170 mKIAA1 KQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHIWNGTQQYLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHIWNGTQQYLH 700 710 720 730 740 750 180 190 200 210 220 230 mKIAA1 CTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALESEGGVPALVG :.::::::. :::::::::::::::::::::::::::::::::::.:::::::::::::: gi|739 CAFTLERVSPSTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAELLALESEGGVPALVG 760 770 780 790 800 810 240 250 260 270 280 290 mKIAA1 PSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEA 820 830 840 850 860 870 300 310 320 mKIAA1 RHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::.:::::::::::::::::::::::: gi|739 RHFPNGNLSQLAAAVAGLGQPDAGLFTVSEAEC 880 890 900 >>gi|73953283|ref|XP_865818.1| PREDICTED: similar to net (910 aa) initn: 1491 init1: 1445 opt: 1446 Z-score: 1795.7 bits: 342.0 E(): 2.6e-91 Smith-Waterman score: 1548; 54.479% identity (56.490% similar) in 547 aa overlap (16-328:364-910) 10 20 30 40 mKIAA1 SLYIPAILKTTLSLAASSGPEDVALYIGLVAVAVCLILLLLVLVL ..: :::::::.::.::::::.::::::.: gi|739 CRGTDLDTRNCTSDLCVHSESSLPQESSGFSASRPEDVALYVGLIAVAVCLLLLLLVLIL 340 350 360 370 380 390 50 60 70 80 90 100 mKIAA1 IYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQGSLCPRQ .:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|739 VYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTCQGSLCPRQ 400 410 420 430 440 450 110 mKIAA1 DGPSPKFQL--------------------------------------------------- :: :::::: gi|739 DGTSPKFQLANGHLLSPLSGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGTSNMTYG 460 470 480 490 500 510 mKIAA1 ------------------------------------------------------------ gi|739 TFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLLSPIVSC 520 530 540 550 560 570 mKIAA1 ------------------------------------------------------------ gi|739 GPPGVLLTRPVILAMDHCGEPCPESWSLRLKKQSCEGSWEDVLHLGEEAPSHLYYCQLEA 580 590 600 610 620 630 mKIAA1 ------------------------------------------------------------ gi|739 GACYVFTEQLGRFALVGEALSVAATKRLKLLLFAPVACTSLEYNIRVYCLHDTHDALKEV 640 650 660 670 680 690 120 130 140 150 160 170 mKIAA1 ---EKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHIWNGTQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHIWNGTQ 700 710 720 730 740 750 180 190 200 210 220 230 mKIAA1 QYLHCTFTLERVNASTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAEMLALESEGGVP :::::.::::::. :::::::::::::::::::::::::::::::::::.:::::::::: gi|739 QYLHCAFTLERVSPSTSDLACKVWVWQVEGDGQSFNINFNITKDTRFAELLALESEGGVP 760 770 780 790 800 810 240 250 260 270 280 290 mKIAA1 ALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILN 820 830 840 850 860 870 300 310 320 mKIAA1 LWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC ::::::::::::.:::::::::::::::::::::::: gi|739 LWEARHFPNGNLSQLAAAVAGLGQPDAGLFTVSEAEC 880 890 900 910 328 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 15:08:33 2009 done: Mon Mar 16 15:14:30 2009 Total Scan time: 819.370 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]