# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh03915.fasta.nr -Q ../query/mKIAA0272.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0272, 740 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917338 sequences Expectation_n fit: rho(ln(x))= 5.9487+/-0.000193; mu= 9.8883+/- 0.011 mean_var=97.9794+/-18.878, 0's: 30 Z-trim: 41 B-trim: 491 in 1/64 Lambda= 0.129571 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148692855|gb|EDL24802.1| Brca1 associated prote ( 755) 4900 926.7 0 gi|68565075|sp|Q99PU7.1|BAP1_MOUSE RecName: Full=U ( 728) 4810 909.8 0 gi|148692856|gb|EDL24803.1| Brca1 associated prote ( 768) 4659 881.6 0 gi|73985316|ref|XP_541853.2| PREDICTED: similar to ( 729) 4538 859.0 0 gi|109039220|ref|XP_001089173.1| PREDICTED: simila ( 729) 4513 854.3 0 gi|149034185|gb|EDL88955.1| Brca1 associated prote ( 740) 4512 854.1 0 gi|149728610|ref|XP_001493524.1| PREDICTED: BRCA1 ( 726) 4508 853.4 0 gi|114587267|ref|XP_001171970.1| PREDICTED: BRCA1 ( 729) 4500 851.9 0 gi|68565074|sp|Q92560.2|BAP1_HUMAN RecName: Full=U ( 729) 4482 848.5 0 gi|114587271|ref|XP_001171939.1| PREDICTED: BRCA1 ( 647) 3925 744.4 3.2e-212 gi|114587275|ref|XP_516511.2| PREDICTED: BRCA1 ass ( 639) 3858 731.8 1.9e-208 gi|73985322|ref|XP_859529.1| PREDICTED: similar to ( 714) 3821 725.0 2.5e-206 gi|73985320|ref|XP_859494.1| PREDICTED: similar to ( 739) 3603 684.2 4.7e-194 gi|32492935|gb|AAN05092.1| MU-MB-17.261 [Homo sapi ( 566) 3389 644.1 4.2e-182 gi|194041223|ref|XP_001925271.1| PREDICTED: BRCA1 ( 682) 3189 606.8 8.7e-171 gi|73985318|ref|XP_859457.1| PREDICTED: similar to ( 499) 2976 566.9 6.6e-159 gi|114587273|ref|XP_001171926.1| PREDICTED: BRCA1 ( 499) 2932 558.7 2e-156 gi|124829183|gb|AAI33318.1| BAP1 protein [Bos taur ( 711) 2909 554.5 5.1e-155 gi|114587269|ref|XP_001171956.1| PREDICTED: BRCA1 ( 711) 2878 548.7 2.8e-153 gi|47229700|emb|CAG06896.1| unnamed protein produc ( 754) 2519 481.6 4.7e-133 gi|189535027|ref|XP_687254.3| PREDICTED: similar t ( 755) 2453 469.2 2.4e-129 gi|120537825|gb|AAI29507.1| LOC558885 protein [Dan ( 686) 2434 465.7 2.7e-128 gi|60098835|emb|CAH65248.1| hypothetical protein [ ( 700) 2220 425.7 3e-116 gi|224065984|ref|XP_002191923.1| PREDICTED: BRCA1 ( 715) 2152 413.0 2e-112 gi|62825902|gb|AAH94108.1| MGC114946 protein [Xeno ( 618) 2061 395.9 2.4e-107 gi|89272870|emb|CAJ81966.1| Novel Ubiquitin carbox ( 685) 2049 393.7 1.2e-106 gi|51703436|gb|AAH80985.1| BRCA1 associated protei ( 685) 2047 393.3 1.6e-106 gi|94732330|emb|CAK11034.1| novel protein similar ( 724) 1932 371.8 4.9e-100 gi|210123067|gb|EEA70770.1| hypothetical protein B ( 694) 1392 270.9 1.2e-69 gi|156548157|ref|XP_001606781.1| PREDICTED: simila ( 482) 1244 243.1 1.9e-61 gi|156211680|gb|EDO32776.1| predicted protein [Nem ( 377) 1207 236.1 1.9e-59 gi|193580294|ref|XP_001944229.1| PREDICTED: simila ( 505) 1201 235.1 5.1e-59 gi|210123082|gb|EEA70785.1| hypothetical protein B ( 635) 1186 232.4 4.2e-58 gi|108883957|gb|EAT48182.1| ubiquitin c-terminal h ( 478) 1175 230.2 1.4e-57 gi|91087099|ref|XP_975054.1| PREDICTED: similar to ( 407) 1166 228.5 4e-57 gi|115918105|ref|XP_793621.2| PREDICTED: similar t ( 815) 1149 225.5 6.2e-56 gi|212506907|gb|EEB10984.1| predicted protein [Ped (1130) 1150 225.8 7e-56 gi|194143951|gb|EDW60347.1| GJ20906 [Drosophila vi ( 462) 1077 211.9 4.5e-52 gi|194193739|gb|EDX07315.1| GD25561 [Drosophila si ( 471) 1077 211.9 4.6e-52 gi|194126051|gb|EDW48094.1| GM20083 [Drosophila se ( 471) 1077 211.9 4.6e-52 gi|7302976|gb|AAF58046.1| CG8445, isoform A [Droso ( 471) 1077 211.9 4.6e-52 gi|194178362|gb|EDW91973.1| GE14091 [Drosophila ya ( 471) 1076 211.7 5.2e-52 gi|193587380|ref|XP_001943902.1| PREDICTED: simila ( 421) 1075 211.5 5.4e-52 gi|190620495|gb|EDV36019.1| GF12763 [Drosophila an ( 470) 1075 211.5 5.9e-52 gi|190658591|gb|EDV55804.1| GG22294 [Drosophila er ( 471) 1074 211.3 6.7e-52 gi|193899370|gb|EDV98236.1| GH22997 [Drosophila gr ( 462) 1072 210.9 8.6e-52 gi|193910704|gb|EDW09571.1| GI18963 [Drosophila mo ( 461) 1070 210.6 1.1e-51 gi|54635715|gb|EAL25118.1| GA21084 [Drosophila pse ( 475) 1069 210.4 1.3e-51 gi|194162150|gb|EDW77051.1| GK22163 [Drosophila wi ( 435) 1066 209.8 1.8e-51 gi|198416231|ref|XP_002126151.1| PREDICTED: simila ( 435) 1063 209.2 2.6e-51 >>gi|148692855|gb|EDL24802.1| Brca1 associated protein 1 (755 aa) initn: 4900 init1: 4900 opt: 4900 Z-score: 4950.5 bits: 926.7 E(): 0 Smith-Waterman score: 4900; 99.865% identity (100.000% similar) in 740 aa overlap (1-740:16-755) 10 20 30 40 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIY ::::::::::::::::::::::::::::::::::::::::::::: gi|148 GRWALPVGGGAGLAGPGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIY 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 DLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCAT 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 HALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLP 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 EKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMER 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 IGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQT 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 HKSQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HKSQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCK 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 LVVKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LVVKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQ 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 YSEDEDDYEDEDEDVQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YSEDEDDYEDEDEDVQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQE 430 440 450 460 470 480 470 480 490 500 510 520 mKIAA0 SQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSA 490 500 510 520 530 540 530 540 550 560 570 580 mKIAA0 NPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLA 550 560 570 580 590 600 590 600 610 620 630 640 mKIAA0 LTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLA 610 620 630 640 650 660 650 660 670 680 690 700 mKIAA0 LLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 670 680 690 700 710 720 710 720 730 740 mKIAA0 NISVRRRQGVSIGRLHKQRKPDRRKRSRPYKVKRQ :::::::::::::::::::::::::::::::.::: gi|148 NISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 730 740 750 >>gi|68565075|sp|Q99PU7.1|BAP1_MOUSE RecName: Full=Ubiqu (728 aa) initn: 4810 init1: 4810 opt: 4810 Z-score: 4859.7 bits: 909.8 E(): 0 Smith-Waterman score: 4810; 99.863% identity (100.000% similar) in 728 aa overlap (13-740:1-728) 10 20 30 40 50 60 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF :::::::::::::::::::::::::::::::::::::::::::::::: gi|685 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF 10 20 30 40 70 80 90 100 110 120 mKIAA0 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 NLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 NLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 SSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPP 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 NPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYEDEDEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 NPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYEDEDEDV 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA0 QNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 QNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTSS 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA0 GAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 GAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISK 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA0 VLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 VLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRSS 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA0 QGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 QGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEAC 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA0 LKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 LKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRL 650 660 670 680 690 700 730 740 mKIAA0 HKQRKPDRRKRSRPYKVKRQ ::::::::::::::::.::: gi|685 HKQRKPDRRKRSRPYKAKRQ 710 720 >>gi|148692856|gb|EDL24803.1| Brca1 associated protein 1 (768 aa) initn: 4659 init1: 4659 opt: 4659 Z-score: 4706.9 bits: 881.6 E(): 0 Smith-Waterman score: 4864; 98.141% identity (98.274% similar) in 753 aa overlap (1-740:16-768) 10 20 30 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFG---------- ::::::::::::::::::::::::::::::::::: gi|148 GRWALPVGGGAGLAGPGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGKNPVTHDLRS 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA0 ---VKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LAGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA0 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA0 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDE 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA0 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQ 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA0 QLIRVTQPELIQTHKSQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QLIRVTQPELIQTHKSQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSC 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA0 PQTTTHSPPSKCKLVVKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PQTTTHSPPSKCKLVVKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAG 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA0 VGRSRVPVRAPQQYSEDEDDYEDEDEDVQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VGRSRVPVRAPQQYSEDEDDYEDEDEDVQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQ 430 440 450 460 470 480 460 470 480 490 500 510 mKIAA0 PNTINVLTEKLQESQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PNTINVLTEKLQESQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGS 490 500 510 520 530 540 520 530 540 550 560 570 mKIAA0 AFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGL 550 560 570 580 590 600 580 590 600 610 620 630 mKIAA0 LHLAEDGVLSPLALTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LHLAEDGVLSPLALTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEP 610 620 630 640 650 660 640 650 660 670 680 690 mKIAA0 LSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISM 670 680 690 700 710 720 700 710 720 730 740 mKIAA0 LAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKVKRQ ::::::::::::::::::::::::::::::::::::::::::::.::: gi|148 LAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 730 740 750 760 >>gi|73985316|ref|XP_541853.2| PREDICTED: similar to BRC (729 aa) initn: 2653 init1: 2603 opt: 4538 Z-score: 4585.0 bits: 859.0 E(): 0 Smith-Waterman score: 4538; 94.239% identity (97.805% similar) in 729 aa overlap (13-740:1-729) 10 20 30 40 50 60 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF 10 20 30 40 70 80 90 100 110 120 mKIAA0 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|739 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSSVDL 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 NLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA ::::::::::::::.::::::::::::::::::::::::::::::::::: ::::::::: gi|739 NLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQEPQLPEESKPA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPP ::::::.:.:::. .::: :.:::.::::::: :. ::::::: :::::::::::::::: gi|739 SSKSPLALDAGRATAASEGTHTDGVEEVAGSCSQAPTHSPPSKPKLVVKPPGSSLNGVPP 290 300 310 320 330 340 370 380 390 400 410 mKIAA0 NPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYED-EDED ::.:::::::::::::::::::::::::::::::::::::: :::::.::::::: ::.: gi|739 NPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEDDD 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 VQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTS ::::: :::::::: :::: ::.:.:::::::::::::::.:::.:::::::.::::::: gi|739 VQNTNSAIRYKRKGPGKPGPLSGSGDGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTS 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SGAASPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: .: gi|739 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPCSRP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 SQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEA ::::::::. :::::::...::.:::: : .::::::::::::::::::::::::::::: gi|739 SQGSQGSSSPEEKEVVEAVDSREKPGLARPGEPLSGEKYSPKELLALLKCVEAEIANYEA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR 650 660 670 680 690 700 720 730 740 mKIAA0 LHKQRKPDRRKRSRPYKVKRQ :::::::::::::::::.::: gi|739 LHKQRKPDRRKRSRPYKAKRQ 710 720 >>gi|109039220|ref|XP_001089173.1| PREDICTED: similar to (729 aa) initn: 2647 init1: 2601 opt: 4513 Z-score: 4559.7 bits: 854.3 E(): 0 Smith-Waterman score: 4513; 93.964% identity (97.531% similar) in 729 aa overlap (13-740:1-729) 10 20 30 40 50 60 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF :::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF 10 20 30 40 70 80 90 100 110 120 mKIAA0 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 NLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: : gi|109 NLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKSA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPP :.:::: :::.:.:.:.: :.::::::.:::: :. .:::::: :::::::::::::::: gi|109 SNKSPLVLEANRAPAATEGTHTDGAEEAAGSCTQAPSHSPPSKPKLVVKPPGSSLNGVPP 290 300 310 320 330 340 370 380 390 400 410 mKIAA0 NPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYEDEDED- ::.:::::::::::::::::::::::::::::::::::::: :::::.:::::::..:: gi|109 NPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEDD 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 VQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTS ::::: :::::::::::::.::.:.:::::::::::::::.:::.:::::::.::::::: gi|109 VQNTNSAIRYKRKGTGKPGALSGSADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTS 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|109 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSIRP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 SQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEA :::::::. ::::::.:.::.: :: : .:: :::::::::::::::::::::::::: gi|109 IQGSQGSSSPVEKEVVEATDSREKTGLVRPGEPSSGEKYSPKELLALLKCVEAEIANYEA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR 650 660 670 680 690 700 720 730 740 mKIAA0 LHKQRKPDRRKRSRPYKVKRQ :::::::::::::::::.::: gi|109 LHKQRKPDRRKRSRPYKAKRQ 710 720 >>gi|149034185|gb|EDL88955.1| Brca1 associated protein 1 (740 aa) initn: 2471 init1: 2425 opt: 4512 Z-score: 4558.6 bits: 854.1 E(): 0 Smith-Waterman score: 4627; 95.277% identity (97.436% similar) in 741 aa overlap (13-740:1-740) 10 20 30 40 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFG-------------VKGVQVEEIYDL ::::::::::::::::::::::: :::::::::::: gi|149 MNKGWLELESDPGLFTLLVEDFGKNPFTPDRRALAGVKGVQVEEIYDL 10 20 30 40 50 60 70 80 90 100 mKIAA0 QSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHA :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|149 QSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNSMFFAHQLIPNSCATHA 50 60 70 80 90 100 110 120 130 140 150 160 mKIAA0 LLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEK 110 120 130 140 150 160 170 180 190 200 210 220 mKIAA0 QNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIG 170 180 190 200 210 220 230 240 250 260 270 280 mKIAA0 LATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHK :::::::::::::::::::::::.:::.:::::: ::::::::::::::::::::::::: gi|149 LATAGEPYHDIRFNLMAVVPDRRVKYEARLHVLKGNRQTVLEALQQLIRVTQPELIQTHK 230 240 250 260 270 280 290 300 310 320 330 340 mKIAA0 SQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLV ::::::::::::::::::.::::::::.:::::.:::::::::::::::::::::: ::: gi|149 SQESQLPEESKPASSKSPFGLEAGRTPAASECTHTDGAEEVAGSCPQTTTHSPPSKSKLV 290 300 310 320 330 340 350 360 370 380 390 400 mKIAA0 VKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYS ::: :::::::::.:.:::::::::::::::::::::::::::::::::::::: ::::: gi|149 VKPSGSSLNGVPPTPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVR-PQQYS 350 360 370 380 390 400 410 420 430 440 450 460 mKIAA0 EDEDDYEDEDEDVQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQ .::.:::::.::::::. :::::::::::::::::::::::::::::::::::::::::: gi|149 DDEEDYEDEEEDVQNTSSAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQ 410 420 430 440 450 460 470 480 490 500 510 520 mKIAA0 KDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANP ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANP 470 480 490 500 510 520 530 540 550 560 570 580 mKIAA0 TRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALT 530 540 550 560 570 580 590 600 610 620 630 640 mKIAA0 EGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALL ::::::::::::::::::::.::::::::::.:::: ::::::::::::::::::::::: gi|149 EGGKGSSPSTRSSQGSQGSSSLEEKEVVEVTDSRDKSGLNRSSEPLSGEKYSPKELLALL 590 600 610 620 630 640 650 660 670 680 690 700 mKIAA0 KCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNI 650 660 670 680 690 700 710 720 730 740 mKIAA0 SVRRRQGVSIGRLHKQRKPDRRKRSRPYKVKRQ :::::::::::::::::::::::::::::.::: gi|149 SVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 710 720 730 740 >>gi|149728610|ref|XP_001493524.1| PREDICTED: BRCA1 asso (726 aa) initn: 3466 init1: 2618 opt: 4508 Z-score: 4554.7 bits: 853.4 E(): 0 Smith-Waterman score: 4508; 93.690% identity (97.668% similar) in 729 aa overlap (13-740:1-726) 10 20 30 40 50 60 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF 10 20 30 40 70 80 90 100 110 120 mKIAA0 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 NLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|149 NLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPP :.:::..:::::. .::: :.:::.:::::::::. ::::::: :::::::::::::::: gi|149 SGKSPMALEAGRASAASESTHTDGVEEVAGSCPQAPTHSPPSKPKLVVKPPGSSLNGVPP 290 300 310 320 330 340 370 380 390 400 410 mKIAA0 NPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYED-EDED .:.:::::::::::::::::::::::::::::::::::::: :::::.::::::: ::.: gi|149 TPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEDDD 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 VQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTS ::::: :::::::: :::: ::.:.:::::::::::::::.:::.:::::::.::::::: gi|149 VQNTNSAIRYKRKGPGKPGPLSSSGDGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTS 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SGAGSPAVAMPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRS ::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: : gi|149 KVLFGEEDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSIRP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 SQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEA :::: :. :::::.:....:.:::: : .::::::::::::::::::::::::::::: gi|149 SQGS---SSPEEKEVLEAVDGREKPGLVRPGEPLSGEKYSPKELLALLKCVEAEIANYEA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR 650 660 670 680 690 700 720 730 740 mKIAA0 LHKQRKPDRRKRSRPYKVKRQ :::::::::::::::::.::: gi|149 LHKQRKPDRRKRSRPYKAKRQ 710 720 >>gi|114587267|ref|XP_001171970.1| PREDICTED: BRCA1 asso (729 aa) initn: 2630 init1: 2595 opt: 4500 Z-score: 4546.6 bits: 851.9 E(): 0 Smith-Waterman score: 4500; 93.553% identity (97.531% similar) in 729 aa overlap (13-740:1-729) 10 20 30 40 50 60 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF :::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF 10 20 30 40 70 80 90 100 110 120 mKIAA0 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 NLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: : gi|114 NLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKSA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPP :.:::: :::.:.:.::: ..::::::.:::: :. .::::.: :::::::::::::::: gi|114 SNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPNKPKLVVKPPGSSLNGVPP 290 300 310 320 330 340 370 380 390 400 410 mKIAA0 NPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYEDEDED- ::.:::::::::::::::::::::::::::::::::::::: :::::.:::::::..:: gi|114 NPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEDD 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 VQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTS ::::: :.::: :::::::.::.:.:::::::::::::::.:::.:::::::.::::::: gi|114 VQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTS 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|114 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSIRP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 SQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEA :::::::. ::::::.:.::.: :. : .::::::::::::::::::::::::::::: gi|114 IQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPKELLALLKCVEAEIANYEA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR 650 660 670 680 690 700 720 730 740 mKIAA0 LHKQRKPDRRKRSRPYKVKRQ :::::::::::::::::.::: gi|114 LHKQRKPDRRKRSRPYKAKRQ 710 720 >>gi|68565074|sp|Q92560.2|BAP1_HUMAN RecName: Full=Ubiqu (729 aa) initn: 2612 init1: 2577 opt: 4482 Z-score: 4528.4 bits: 848.5 E(): 0 Smith-Waterman score: 4482; 93.278% identity (97.394% similar) in 729 aa overlap (13-740:1-729) 10 20 30 40 50 60 mKIAA0 PGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF :::::::::::::::::::::::::::::::::::::::::::::::: gi|685 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIF 10 20 30 40 70 80 90 100 110 120 mKIAA0 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|685 LFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSSVDL 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 GPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 NLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: : gi|685 NLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKSA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPP :.:::: :::.:.:.::: ..::::::.:::: :. .::::.: :::::::::::::: : gi|685 SNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPNKPKLVVKPPGSSLNGVHP 290 300 310 320 330 340 370 380 390 400 410 mKIAA0 NPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYEDEDED- ::.:::::::::::::::::::::::::::::::::::::: :::::.:::::::..:: gi|685 NPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEDD 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 VQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTS ::::: :.::: :::::::.::.:.:::::::::::::::.:::.:::::::.::::::: gi|685 VQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTS 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 SGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHIS 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|685 KVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSIRP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 SQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEA :::::::. ::::::.:.::.: :. : .::::::::::::::::::::::::::::: gi|685 IQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPKELLALLKCVEAEIANYEA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 CLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGR 650 660 670 680 690 700 720 730 740 mKIAA0 LHKQRKPDRRKRSRPYKVKRQ :::::::::::::::::.::: gi|685 LHKQRKPDRRKRSRPYKAKRQ 710 720 >>gi|114587271|ref|XP_001171939.1| PREDICTED: BRCA1 asso (647 aa) initn: 2055 init1: 2020 opt: 3925 Z-score: 3966.4 bits: 744.4 E(): 3.2e-212 Smith-Waterman score: 3925; 92.702% identity (97.205% similar) in 644 aa overlap (98-740:4-647) 70 80 90 100 110 120 mKIAA0 RRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRM :::::::::::::::::::::::::::::: gi|114 MSGLIPNSCATHALLSVLLNCSNVDLGPTLSRM 10 20 30 130 140 150 160 170 180 mKIAA0 KDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVP 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA0 ITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVP 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA0 DRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPASSKSPLG :::::::.::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|114 DRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKSASNKSPLV 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA0 LEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPPNPAPIVQ :::.:.:.::: ..::::::.:::: :. .::::.: ::::::::::::::::::.:::: gi|114 LEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPNKPKLVVKPPGSSLNGVPPNPTPIVQ 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA0 RLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYEDEDED-VQNTNPA :::::::::::::::::::::::::::::::::: :::::.:::::::..:: ::::: : gi|114 RLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSA 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA0 IRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTSSGAGSPA .::: :::::::.::.:.:::::::::::::::.:::.:::::::.:::::::::::::: gi|114 LRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTSSGAGSPA 340 350 360 370 380 390 490 500 510 520 530 540 mKIAA0 VAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGED 400 410 420 430 440 450 550 560 570 580 590 600 mKIAA0 DSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSTRSSQGSQGS :::::::::::::::::::::::::::::::::::::::::::::::::: : :::::: gi|114 DSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSIRPIQGSQGS 460 470 480 490 500 510 610 620 630 640 650 660 mKIAA0 SGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVE :. ::::::.:.::.: :. : .:::::::::::::::::::::::::::::::::::: gi|114 SSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVE 520 530 540 550 560 570 670 680 690 700 710 720 mKIAA0 KRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKP 580 590 600 610 620 630 730 740 mKIAA0 DRRKRSRPYKVKRQ ::::::::::.::: gi|114 DRRKRSRPYKAKRQ 640 740 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 18:51:23 2009 done: Fri Mar 13 18:59:35 2009 Total Scan time: 1082.980 Total Display time: 0.320 Function used was FASTA [version 34.26.5 April 26, 2007]