# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh03638.fasta.nr -Q ../query/mKIAA1917.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1917, 342 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917288 sequences Expectation_n fit: rho(ln(x))= 6.1888+/-0.000193; mu= 5.5502+/- 0.011 mean_var=102.6432+/-19.397, 0's: 30 Z-trim: 36 B-trim: 37 in 2/65 Lambda= 0.126593 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|123263885|emb|CAM16806.1| ring finger protein 1 ( 505) 2276 425.9 8.7e-117 gi|26332417|dbj|BAC29926.1| unnamed protein produc ( 506) 2276 425.9 8.7e-117 gi|148702626|gb|EDL34573.1| mCG119811 [Mus musculu ( 620) 2277 426.1 9e-117 gi|123263886|emb|CAM16808.1| ring finger protein 1 ( 681) 2276 426.0 1.1e-116 gi|149054849|gb|EDM06666.1| rCG33570 [Rattus norve ( 354) 2129 398.9 8e-109 gi|109492268|ref|XP_001081716.1| PREDICTED: simila ( 657) 2129 399.1 1.3e-108 gi|74143820|dbj|BAE41232.1| unnamed protein produc ( 494) 2008 376.9 4.6e-102 gi|118573799|sp|Q3TEL6.2|RN157_MOUSE RecName: Full ( 685) 2008 377.0 6e-102 gi|109118484|ref|XP_001097963.1| PREDICTED: simila ( 797) 1984 372.7 1.4e-100 gi|119609786|gb|EAW89380.1| ring finger protein 15 ( 589) 1932 363.1 8e-98 gi|119609784|gb|EAW89378.1| ring finger protein 15 ( 680) 1932 363.1 9e-98 gi|73965001|ref|XP_540446.2| PREDICTED: similar to ( 716) 1930 362.8 1.2e-97 gi|16550805|dbj|BAB71053.1| unnamed protein produc ( 352) 1921 360.9 2.2e-97 gi|118573798|sp|Q96PX1.3|RN157_HUMAN RecName: Full ( 679) 1921 361.1 3.6e-97 gi|119912751|ref|XP_584356.3| PREDICTED: similar t ( 686) 1921 361.1 3.6e-97 gi|194216620|ref|XP_001491840.2| PREDICTED: simila ( 697) 1857 349.4 1.2e-93 gi|126308408|ref|XP_001369050.1| PREDICTED: simila ( 687) 1764 332.4 1.6e-88 gi|123263887|emb|CAM16809.1| ring finger protein 1 ( 659) 1454 275.8 1.7e-71 gi|21749843|dbj|BAC03669.1| unnamed protein produc ( 619) 1277 243.5 8.6e-62 gi|82201451|sp|Q6INH1.1|RN157_XENLA RecName: Full= ( 674) 1071 205.9 1.9e-50 gi|123263884|emb|CAM16805.1| ring finger protein 1 ( 165) 996 191.7 8.5e-47 gi|189526116|ref|XP_683006.3| PREDICTED: similar t ( 654) 995 192.0 2.9e-46 gi|47208185|emb|CAF91338.1| unnamed protein produc ( 577) 585 117.1 9e-24 gi|111308096|gb|AAI21439.1| Mahogunin ring finger ( 492) 508 103.0 1.4e-19 gi|169145996|emb|CAQ14150.1| novel protein similar ( 549) 296 64.3 6.7e-08 gi|60688283|gb|AAH90462.1| LOC553327 protein [Dani ( 442) 281 61.5 3.8e-07 gi|149497346|ref|XP_001516608.1| PREDICTED: hypoth ( 503) 271 59.7 1.5e-06 gi|47220060|emb|CAG12208.1| unnamed protein produc ( 496) 268 59.1 2.1e-06 gi|81904608|sp|Q9D074.2|MGRN1_MOUSE RecName: Full= ( 532) 266 58.8 2.9e-06 gi|74142427|dbj|BAE31967.1| unnamed protein produc ( 533) 266 58.8 2.9e-06 gi|74213858|dbj|BAE29360.1| unnamed protein produc ( 533) 266 58.8 2.9e-06 gi|126334713|ref|XP_001367444.1| PREDICTED: simila ( 534) 261 57.9 5.5e-06 gi|149042641|gb|EDL96278.1| similar to mahogunin, ( 532) 257 57.1 9.1e-06 gi|81889879|sp|Q5XIQ4.1|MGRN1_RAT RecName: Full=Pr ( 533) 257 57.1 9.1e-06 gi|33870977|gb|AAH04231.2| RNF157 protein [Homo sa ( 265) 246 54.9 2.1e-05 gi|118098155|ref|XP_414957.2| PREDICTED: similar t ( 536) 245 54.9 4.2e-05 gi|217337302|gb|ABO69623.2| mahogunin variant 1.2 ( 554) 244 54.8 4.9e-05 gi|214010234|ref|NP_001135761.1| mahogunin, ring f ( 555) 244 54.8 4.9e-05 gi|224069916|ref|XP_002193768.1| PREDICTED: mahogu ( 488) 243 54.6 5e-05 gi|119609785|gb|EAW89379.1| ring finger protein 15 ( 418) 242 54.3 5e-05 gi|119605687|gb|EAW85281.1| mahogunin, ring finger ( 602) 244 54.8 5.2e-05 gi|146741352|dbj|BAF62331.1| mahogunin ring finger ( 488) 241 54.2 6.5e-05 gi|194219270|ref|XP_001499593.2| PREDICTED: simila ( 627) 232 52.6 0.00025 gi|217337304|gb|ABO69624.2| mahogunin variant 2.2 ( 530) 230 52.2 0.00028 gi|214010238|ref|NP_001135763.1| mahogunin, ring f ( 531) 230 52.2 0.00028 gi|213624790|gb|AAI71584.1| Mgrn1 protein [Danio r ( 554) 230 52.2 0.00029 gi|26329697|dbj|BAC28587.1| unnamed protein produc ( 237) 219 49.9 0.00059 gi|126334715|ref|XP_001367486.1| PREDICTED: simila ( 556) 224 51.1 0.00061 gi|166796876|gb|AAI59205.1| Mgrn1 protein [Danio r ( 529) 222 50.7 0.00076 gi|82209566|sp|Q7ZUL9.1|MGRN1_DANRE RecName: Full= ( 529) 221 50.6 0.00086 >>gi|123263885|emb|CAM16806.1| ring finger protein 157 [ (505 aa) initn: 2276 init1: 2276 opt: 2276 Z-score: 2253.0 bits: 425.9 E(): 8.7e-117 Smith-Waterman score: 2276; 99.708% identity (100.000% similar) in 342 aa overlap (1-342:164-505) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::::::::::: gi|123 NNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPPGYEVVSL 140 150 160 170 180 190 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL 200 210 220 230 240 250 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA 260 270 280 290 300 310 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 320 330 340 350 360 370 220 230 240 250 260 270 mKIAA1 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|123 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIIEEEDRSPVREDGQRTCA 380 390 400 410 420 430 280 290 300 310 320 330 mKIAA1 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE 440 450 460 470 480 490 340 mKIAA1 ENRPCVWDPMAV :::::::::::: gi|123 ENRPCVWDPMAV 500 >>gi|26332417|dbj|BAC29926.1| unnamed protein product [M (506 aa) initn: 2276 init1: 2276 opt: 2276 Z-score: 2253.0 bits: 425.9 E(): 8.7e-117 Smith-Waterman score: 2276; 99.708% identity (100.000% similar) in 342 aa overlap (1-342:165-506) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::::::::::: gi|263 NNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPPGYEVVSL 140 150 160 170 180 190 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL 200 210 220 230 240 250 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA 260 270 280 290 300 310 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 320 330 340 350 360 370 220 230 240 250 260 270 mKIAA1 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|263 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIIEEEDRSPVREDGQRTCA 380 390 400 410 420 430 280 290 300 310 320 330 mKIAA1 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE 440 450 460 470 480 490 340 mKIAA1 ENRPCVWDPMAV :::::::::::: gi|263 ENRPCVWDPMAV 500 >>gi|148702626|gb|EDL34573.1| mCG119811 [Mus musculus] (620 aa) initn: 2277 init1: 2277 opt: 2277 Z-score: 2252.7 bits: 426.1 E(): 9e-117 Smith-Waterman score: 2277; 100.000% identity (100.000% similar) in 342 aa overlap (1-342:279-620) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::::::::::: gi|148 NNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPPGYEVVSL 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 430 440 450 460 470 480 220 230 240 250 260 270 mKIAA1 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA 490 500 510 520 530 540 280 290 300 310 320 330 mKIAA1 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE 550 560 570 580 590 600 340 mKIAA1 ENRPCVWDPMAV :::::::::::: gi|148 ENRPCVWDPMAV 610 620 >>gi|123263886|emb|CAM16808.1| ring finger protein 157 [ (681 aa) initn: 2276 init1: 2276 opt: 2276 Z-score: 2251.2 bits: 426.0 E(): 1.1e-116 Smith-Waterman score: 2276; 99.708% identity (100.000% similar) in 342 aa overlap (1-342:340-681) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::::::::::: gi|123 NNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPPGYEVVSL 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|123 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIIEEEDRSPVREDGQRTCA 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE 610 620 630 640 650 660 340 mKIAA1 ENRPCVWDPMAV :::::::::::: gi|123 ENRPCVWDPMAV 670 680 >>gi|149054849|gb|EDM06666.1| rCG33570 [Rattus norvegicu (354 aa) initn: 2129 init1: 2129 opt: 2129 Z-score: 2110.1 bits: 398.9 E(): 8e-109 Smith-Waterman score: 2129; 93.860% identity (97.661% similar) in 342 aa overlap (1-342:13-354) 10 20 30 40 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSLLEALNGPLTSSPAVPPLH :::::::::::::::::::::: ::::::::::::::::::::::::: gi|149 MRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPAGYEVVSLLEALNGPLTSSPAVPPLH 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA1 VLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKLKKSLSKSISQNSSVLHEE ::::::::::::::::::.:::::::::::.:::::.:::::.::::::::::::::::: gi|149 VLGDGHLSGMLPSYGSDGHLPPVRTLSPLDHLSDCNSQGLKLNKSLSKSISQNSSVLHEE 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA1 EDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGAVDQSSCTGTPLSSTISSP ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|149 EDERSCSESDTQLSQRLSAQHPEEGPDVTPESENLTLSSSGAVDQSSCTGTPLSSTISSP 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA1 EDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALPSPRAASRAPSEGEET ::::::::::::::::::::::::::::::::::::::::::: :::::::::::: ::: gi|149 EDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEAPPSPRAASRAPSEEEET 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA1 PAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCAFLGMECDNNNDFDVASVK ::::::::::::::::::::::::.::::::::.:::::::::::::::::::::::::: gi|149 PAESPDSNFAGLPAGEQDAEGNDIMEEEDRSPVQEDGQRTCAFLGMECDNNNDFDVASVK 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA1 ALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPEENRPCVWDPMAV ::::::::::::::::::. .: ..::::::: ::::::::.:::::::.:: gi|149 ALDNKLCSEVCLPGTWQHDAAIINRHNTQRRRLSPSSLEDPEEDRPCVWDPLAV 310 320 330 340 350 >>gi|109492268|ref|XP_001081716.1| PREDICTED: similar to (657 aa) initn: 2129 init1: 2129 opt: 2129 Z-score: 2106.3 bits: 399.1 E(): 1.3e-108 Smith-Waterman score: 2129; 93.860% identity (97.661% similar) in 342 aa overlap (1-342:316-657) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::: ::::::: gi|109 NNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPAGYEVVSL 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL ::::::::::::::::::::::::::::::::::::.:::::::::::.:::::.::::: gi|109 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGHLPPVRTLSPLDHLSDCNSQGLKL 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA .:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 NKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSAQHPEEGPDVTPESENLTLSSSGA 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA1 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA : :::::::::::: :::::::::::::::::::::::::::.::::::::.:::::::: gi|109 APPSPRAASRAPSEEEETPAESPDSNFAGLPAGEQDAEGNDIMEEEDRSPVQEDGQRTCA 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA1 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE ::::::::::::::::::::::::::::::::::::. .: ..::::::: ::::::: gi|109 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHDAAIINRHNTQRRRLSPSSLEDPE 590 600 610 620 630 640 340 mKIAA1 ENRPCVWDPMAV :.:::::::.:: gi|109 EDRPCVWDPLAV 650 >>gi|74143820|dbj|BAE41232.1| unnamed protein product [M (494 aa) initn: 2038 init1: 2008 opt: 2008 Z-score: 1988.6 bits: 376.9 E(): 4.6e-102 Smith-Waterman score: 2008; 95.611% identity (97.806% similar) in 319 aa overlap (1-319:149-467) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::::::::::: gi|741 NNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPPGYEVVSL 120 130 140 150 160 170 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL 180 190 200 210 220 230 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA 240 250 260 270 280 290 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 300 310 320 330 340 350 220 230 240 250 260 270 mKIAA1 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|741 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIIEEEDRSPVREDGQRTCA 360 370 380 390 400 410 280 290 300 310 320 330 mKIAA1 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE :::::::::::::::::::::::::::::::: :: .. .. :. . : gi|741 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGEWQCAEHELGGRRPSARPRSPRGGLGKE 420 430 440 450 460 470 340 mKIAA1 ENRPCVWDPMAV gi|741 ASAFRIETVALPGTYV 480 490 >>gi|118573799|sp|Q3TEL6.2|RN157_MOUSE RecName: Full=RIN (685 aa) initn: 2038 init1: 2008 opt: 2008 Z-score: 1986.6 bits: 377.0 E(): 6e-102 Smith-Waterman score: 2008; 95.611% identity (97.806% similar) in 319 aa overlap (1-319:340-658) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::::::::::: gi|118 NNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENIPPGYEVVSL 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTCA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|118 ALPSPRAASRAPSEGEETPAESPDSNFAGLPAGEQDAEGNDIIEEEDRSPVREDGQRTCA 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDPE :::::::::::::::::::::::::::::::: :: .. .. :. . : gi|118 FLGMECDNNNDFDVASVKALDNKLCSEVCLPGEWQCAEHELGGRRPSARPRSPRGGLGKE 610 620 630 640 650 660 340 mKIAA1 ENRPCVWDPMAV gi|118 ASAFRIETVALPGTYV 670 680 >>gi|109118484|ref|XP_001097963.1| PREDICTED: similar to (797 aa) initn: 1921 init1: 1337 opt: 1984 Z-score: 1962.0 bits: 372.7 E(): 1.4e-100 Smith-Waterman score: 1984; 88.630% identity (95.044% similar) in 343 aa overlap (1-342:457-797) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL :::::::::::::::::::::::::::::: gi|109 NNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIISSQTSDSEEHSSSENIPPGYEVVSL 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL ::::::::: ::::::::::::::::::::::::::.::::::.:::::::::.:::::: gi|109 LEALNGPLTPSPAVPPLHVLGDGHLSGMLPSYGSDGHLPPVRTISPLDRLSDCSNQGLKL 490 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA :::::::::::::::::::::::::::.:::::: :.:: : ::::::::::::::: gi|109 KKSLSKSISQNSSVLHEEEDERSCSESETQLSQRPSAQHLGEECGVTPESENLTLSSSGA 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE .:::::::::::::::::: ::::::::::::::::::::::::::::::.::::::::: gi|109 IDQSSCTGTPLSSTISSPEGPASSSLAQSVMSMASSQISTDTVSSMSGSYVAPGTEEEGE 610 620 630 640 650 660 220 230 240 250 260 mKIAA1 ALPSPRAASRAPSE-GEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTC :::::..::::::: :: :::::::::::::::::::::::..:::: ::..::::::: gi|109 ALPSPQSASRAPSEEGEGLPAESPDSNFAGLPAGEQDAEGNDVMEEEDGSPTQEDGQRTC 670 680 690 700 710 720 270 280 290 300 310 320 mKIAA1 AFLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDP ::::::::::::::.::::::::::::::::::.:: .::.:. :..:::::::::::: gi|109 AFLGMECDNNNDFDIASVKALDNKLCSEVCLPGAWQADDNAVS-RNAQRRRLSSSSLEDS 730 740 750 760 770 780 330 340 mKIAA1 EENRPCVWDPMAV : .::::: :.:: gi|109 E-TRPCVWGPLAV 790 >>gi|119609786|gb|EAW89380.1| ring finger protein 157, i (589 aa) initn: 1875 init1: 1298 opt: 1932 Z-score: 1912.5 bits: 363.1 E(): 8e-98 Smith-Waterman score: 1932; 87.172% identity (93.294% similar) in 343 aa overlap (1-342:249-589) 10 20 30 mKIAA1 FNPIISSQTSDSEEHSSSENIPPGYEVVSL ::::::::::::::: :::::::::::::: gi|119 NNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIISSQTSDSEEHPSSENIPPGYEVVSL 220 230 240 250 260 270 40 50 60 70 80 90 mKIAA1 LEALNGPLTSSPAVPPLHVLGDGHLSGMLPSYGSDGYLPPVRTLSPLDRLSDCNNQGLKL ::::::::: ::::::::::::::::::::::::::.::::::.:::::::: ..::::: gi|119 LEALNGPLTPSPAVPPLHVLGDGHLSGMLPSYGSDGHLPPVRTISPLDRLSDSSSQGLKL 280 290 300 310 320 330 100 110 120 130 140 150 mKIAA1 KKSLSKSISQNSSVLHEEEDERSCSESDTQLSQRLSVQHPEEGPDVTPESENLTLSSSGA ::::::: :::::::::::::.:::::.:::::: :::: : ::::::::::::::: gi|119 KKSLSKSTSQNSSVLHEEEDEHSCSESETQLSQRPSVQHLGEECGVTPESENLTLSSSGA 340 350 360 370 380 390 160 170 180 190 200 210 mKIAA1 VDQSSCTGTPLSSTISSPEDPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE .:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|119 IDQSSCTGTPLSSTISSPEGPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGE 400 410 420 430 440 450 220 230 240 250 260 mKIAA1 ALPSPRAASRAPSE-GEETPAESPDSNFAGLPAGEQDAEGNDIVEEEDRSPVREDGQRTC :: ::. ::::::: :: :::::::::::::::::::::::..:::: ::..: ::::: gi|119 ALSSPQPASRAPSEEGEGLPAESPDSNFAGLPAGEQDAEGNDVIEEEDGSPTQEGGQRTC 460 470 480 490 500 510 270 280 290 300 310 320 mKIAA1 AFLGMECDNNNDFDVASVKALDNKLCSEVCLPGTWQHEDNTVNCRHTQRRRLSSSSLEDP ::::::::::::::.::::::::::::::::::.:: .::.:. :..:::::::::::: gi|119 AFLGMECDNNNDFDIASVKALDNKLCSEVCLPGAWQADDNAVS-RNAQRRRLSSSSLEDS 520 530 540 550 560 570 330 340 mKIAA1 EENRPCVWDPMAV : .::::: :.:: gi|119 E-TRPCVWGPLAV 580 342 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 10:08:23 2009 done: Mon Mar 16 10:14:24 2009 Total Scan time: 829.600 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]