# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh03589.fasta.nr -Q ../query/mKIAA1841.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1841, 719 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920274 sequences Expectation_n fit: rho(ln(x))= 5.1035+/-0.000192; mu= 13.2293+/- 0.011 mean_var=82.3883+/-16.319, 0's: 38 Z-trim: 40 B-trim: 5050 in 2/65 Lambda= 0.141300 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|51261340|gb|AAH79876.1| RIKEN cDNA 0610010F05 g ( 718) 4892 1007.5 0 gi|49119723|gb|AAH72622.1| 0610010F05Rik protein [ ( 615) 4108 847.6 0 gi|123122613|emb|CAM16942.1| novel protein [Mus mu ( 572) 3915 808.3 0 gi|148675944|gb|EDL07891.1| RIKEN cDNA 0610010F05, ( 392) 2688 558.0 2.4e-156 gi|47077022|dbj|BAD18445.1| unnamed protein produc ( 379) 2279 474.6 2.9e-131 gi|47221730|emb|CAG10202.1| unnamed protein produc ( 528) 2206 459.8 1.1e-126 gi|123122612|emb|CAM16941.1| novel protein [Mus mu ( 213) 1389 292.9 8e-77 gi|156219005|gb|EDO39893.1| predicted protein [Nem ( 306) 1352 285.5 1.9e-74 gi|123122614|emb|CAM16943.1| novel protein [Mus mu ( 189) 1298 274.3 2.8e-71 gi|26343787|dbj|BAC35550.1| unnamed protein produc ( 189) 1297 274.1 3.2e-71 gi|12832467|dbj|BAB22119.1| unnamed protein produc ( 183) 1182 250.7 3.6e-64 gi|210114052|gb|EEA61815.1| hypothetical protein B ( 546) 1104 235.2 4.9e-59 gi|74210757|dbj|BAE25029.1| unnamed protein produc ( 152) 988 211.1 2.5e-52 gi|157016887|gb|EAL40403.3| AGAP004888-PA [Anophel ( 806) 931 200.1 2.7e-48 gi|167879830|gb|EDS43213.1| conserved hypothetical ( 767) 929 199.7 3.4e-48 gi|108880216|gb|EAT44441.1| conserved hypothetical ( 765) 927 199.3 4.5e-48 gi|66565594|ref|XP_395466.2| PREDICTED: similar to ( 673) 925 198.8 5.4e-48 gi|194118869|gb|EDW40912.1| GM24849 [Drosophila se ( 889) 891 192.0 8.1e-46 gi|193919608|gb|EDW18475.1| GI12076 [Drosophila mo ( 888) 890 191.8 9.3e-46 gi|16182623|gb|AAL13537.1| GH07092p [Drosophila me ( 828) 888 191.4 1.2e-45 gi|7294891|gb|AAF50221.1| CG6761 [Drosophila melan ( 889) 888 191.4 1.2e-45 gi|194196317|gb|EDX09893.1| GD12901 [Drosophila si ( 889) 888 191.4 1.2e-45 gi|190653996|gb|EDV51239.1| GG14015 [Drosophila er ( 887) 885 190.8 1.9e-45 gi|194179364|gb|EDW92975.1| GE21217 [Drosophila ya ( 887) 885 190.8 1.9e-45 gi|190623616|gb|EDV39140.1| GF24648 [Drosophila an ( 914) 885 190.8 1.9e-45 gi|212514935|gb|EEB17159.1| conserved hypothetical ( 577) 846 182.6 3.4e-43 gi|194154423|gb|EDW69607.1| GJ13346 [Drosophila vi ( 892) 777 168.8 8.1e-39 gi|193897687|gb|EDV96553.1| GH15139 [Drosophila gr ( 901) 755 164.3 1.8e-37 gi|198151524|gb|EAL30566.2| GA28659 [Drosophila ps ( 882) 737 160.6 2.3e-36 gi|194112743|gb|EDW34786.1| GL12851 [Drosophila pe ( 883) 737 160.6 2.3e-36 gi|210110732|gb|EEA58559.1| hypothetical protein B ( 624) 689 150.7 1.6e-33 gi|194158576|gb|EDW73477.1| GK17569 [Drosophila wi ( 902) 627 138.2 1.3e-29 gi|163773357|gb|EDQ86998.1| predicted protein [Mon ( 788) 360 83.7 2.9e-13 gi|123122617|emb|CAM16946.1| novel protein [Mus mu ( 48) 328 76.0 3.5e-12 gi|190581635|gb|EDV21711.1| hypothetical protein T ( 461) 296 70.4 1.6e-09 gi|190581634|gb|EDV21710.1| hypothetical protein T ( 278) 203 51.3 0.00058 gi|70834380|gb|EAN79882.1| hypothetical protein, c ( 560) 200 50.9 0.0015 gi|70884320|gb|EAN97186.1| hypothetical protein, c ( 629) 196 50.2 0.0028 >>gi|51261340|gb|AAH79876.1| RIKEN cDNA 0610010F05 gene (718 aa) initn: 4892 init1: 4892 opt: 4892 Z-score: 5388.0 bits: 1007.5 E(): 0 Smith-Waterman score: 4892; 99.861% identity (100.000% similar) in 718 aa overlap (2-719:1-718) 10 20 30 40 50 60 mKIAA1 KMSRGYPENNNFLNNNNQMVLDMILYPLIGIPQTINWETVARLVPGLTPKECVKRFDELK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 MSRGYPENNNFLNNNNQMVLDMILYPLIGIPQTINWETVARLVPGLTPKECVKRFDELK 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SCGSSPVDNQYNPLMATGEGPVETLATYIKSSLLDTQGDFQETPVDQDTVSKAGRHSIAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 SCGSSPVDNQYNPLMATGEGPVETLATYIKSSLLDTQGDFQETPVDQDTVSKAGRHSIAT 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 TRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYFAEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 TRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYFAEY 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSEFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 LSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSEFLK 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 MDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFRSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 MDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFRSKL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 FCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGNIIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 FCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGNIIY 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 IHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQYHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 IHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQYHSE 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 VVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSPSCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 VVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSPSCP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELNAFL :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 PAKLLDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELNAFL 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 SLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKKQLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 SLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKKQLS 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 SPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITGHLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 SPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITGHLI 600 610 620 630 640 650 670 680 690 700 710 mKIAA1 KMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQGRPA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 KMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQGRPA 660 670 680 690 700 710 >>gi|49119723|gb|AAH72622.1| 0610010F05Rik protein [Mus (615 aa) initn: 4104 init1: 4104 opt: 4108 Z-score: 4525.1 bits: 847.6 E(): 0 Smith-Waterman score: 4108; 98.039% identity (98.856% similar) in 612 aa overlap (2-612:1-612) 10 20 30 40 50 60 mKIAA1 KMSRGYPENNNFLNNNNQMVLDMILYPLIGIPQTINWETVARLVPGLTPKECVKRFDELK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 MSRGYPENNNFLNNNNQMVLDMILYPLIGIPQTINWETVARLVPGLTPKECVKRFDELK 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SCGSSPVDNQYNPLMATGEGPVETLATYIKSSLLDTQGDFQETPVDQDTVSKAGRHSIAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 SCGSSPVDNQYNPLMATGEGPVETLATYIKSSLLDTQGDFQETPVDQDTVSKAGRHSIAT 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 TRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYFAEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 TRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYFAEY 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSEFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 LSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSEFLK 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 MDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFRSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 MDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFRSKL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 FCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGNIIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 FCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGNIIY 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 IHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQYHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 IHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQYHSE 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 VVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSPSCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 VVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSPSCP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELNAFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|491 PAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELNAFL 480 490 500 510 520 530 550 560 570 580 590 mKIAA1 SLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKKQ-L ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: . gi|491 SLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKKTTV 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA1 SSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITGHL . :...: : : gi|491 LTLFSKEREDTGEVNF 600 610 >>gi|123122613|emb|CAM16942.1| novel protein [Mus muscul (572 aa) initn: 3915 init1: 3915 opt: 3915 Z-score: 4312.9 bits: 808.3 E(): 0 Smith-Waterman score: 3915; 100.000% identity (100.000% similar) in 572 aa overlap (148-719:1-572) 120 130 140 150 160 170 mKIAA1 IATTRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYF :::::::::::::::::::::::::::::: gi|123 MVIHVCDEAKSLKEDFICPRDLLISEMKYF 10 20 30 180 190 200 210 220 230 mKIAA1 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSE 40 50 60 70 80 90 240 250 260 270 280 290 mKIAA1 FLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 FLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFR 100 110 120 130 140 150 300 310 320 330 340 350 mKIAA1 SKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGN 160 170 180 190 200 210 360 370 380 390 400 410 mKIAA1 IIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 IIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQY 220 230 240 250 260 270 420 430 440 450 460 470 mKIAA1 HSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 HSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSP 280 290 300 310 320 330 480 490 500 510 520 530 mKIAA1 SCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELN 340 350 360 370 380 390 540 550 560 570 580 590 mKIAA1 AFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKK 400 410 420 430 440 450 600 610 620 630 640 650 mKIAA1 QLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITG 460 470 480 490 500 510 660 670 680 690 700 710 mKIAA1 HLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 HLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQGR 520 530 540 550 560 570 mKIAA1 PA :: gi|123 PA >>gi|148675944|gb|EDL07891.1| RIKEN cDNA 0610010F05, iso (392 aa) initn: 2688 init1: 2688 opt: 2688 Z-score: 2963.2 bits: 558.0 E(): 2.4e-156 Smith-Waterman score: 2688; 100.000% identity (100.000% similar) in 392 aa overlap (328-719:1-392) 300 310 320 330 340 350 mKIAA1 SKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGN :::::::::::::::::::::::::::::: gi|148 CCLCKKLLTRETERRIPCIPGKINVDRHGN 10 20 30 360 370 380 390 400 410 mKIAA1 IIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQY 40 50 60 70 80 90 420 430 440 450 460 470 mKIAA1 HSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSP 100 110 120 130 140 150 480 490 500 510 520 530 mKIAA1 SCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELN 160 170 180 190 200 210 540 550 560 570 580 590 mKIAA1 AFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKK 220 230 240 250 260 270 600 610 620 630 640 650 mKIAA1 QLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITG 280 290 300 310 320 330 660 670 680 690 700 710 mKIAA1 HLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQGR 340 350 360 370 380 390 mKIAA1 PA :: gi|148 PA >>gi|47077022|dbj|BAD18445.1| unnamed protein product [H (379 aa) initn: 2273 init1: 2273 opt: 2279 Z-score: 2512.8 bits: 474.6 E(): 2.9e-131 Smith-Waterman score: 2279; 88.919% identity (96.486% similar) in 370 aa overlap (2-371:1-370) 10 20 30 40 50 60 mKIAA1 KMSRGYPENNNFLNNNNQMVLDMILYPLIGIPQTINWETVARLVPGLTPKECVKRFDELK ::::: ::::::::::::::::::::::::::::::::.::::::::::::.::::::: gi|470 MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELK 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SCGSSPVDNQYNPLMATGEGPVETLATYIKSSLLDTQGDFQETPVDQDTVSKAGRHSIAT : :::::::::: :::.::.::::::::::::::: .:.:::::: .:.:::.::::::. gi|470 SSGSSPVDNQYNSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 TRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYFAEY ::::::::::::..:.:: : ::::::::::::::::.::::: :::::::::::::::: gi|470 TRNCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEY 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSEFLK ::::::::::::::::::::::::::::.::::::.::::.:.::::::::::::::::: gi|470 LSMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLK 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 MDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFRSKL :::::::::::::::::::::.:::::::::::::::::::.:::.::::::::::.::: gi|470 MDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 FCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGNIIY ::::::::::::: :::::.::::::::::::::::.:::::::::::::::::.:::.: gi|470 FCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVY 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 IHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQYHSE :::: . .: gi|470 IHIRCREDKIHTCIFVYIYI 360 370 >>gi|47221730|emb|CAG10202.1| unnamed protein product [T (528 aa) initn: 1810 init1: 1237 opt: 2206 Z-score: 2430.5 bits: 459.8 E(): 1.1e-126 Smith-Waterman score: 2207; 60.998% identity (80.591% similar) in 541 aa overlap (148-681:1-527) 120 130 140 150 160 170 mKIAA1 IATTRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYF ::::::::.:.::.:: ::::::..::.:: gi|472 MVIHVCDETKNLKQDFTCPRDLLVKEMRYF 10 20 30 180 190 200 210 220 230 mKIAA1 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTK-ESKDCEIPALEPGNVISILISS :::::.:.::::::::::::::.::.::..::.::: :.:: : :::.::::::::: gi|472 AEYLSVDTQRWEEVDISVHCDVQIFDWLMNYVRRNTAGENKDK--PRLEPSNVISILISS 40 50 60 70 80 240 250 260 270 280 290 mKIAA1 EFLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKF ::::::.:::.:::::::.:.::::.::::::::.:: :::.:::.::: ::..:::::: gi|472 EFLKMDTLVEECIQYCHKHMSAIVATPCNMNCINSNLATRITDLFNHNEADDVRDKKDKF 90 100 110 120 130 140 300 310 320 330 340 350 mKIAA1 RSKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHG .:::: ::::::::: :.: :: .::.::::: :: ::::..::..: :.::::::: .: gi|472 KSKLFQKKIERLFDPGYQNRDSPGNASTLYRCALCLKLLTKDTEKKISCVPGKINVDSRG 150 160 170 180 190 200 360 370 380 390 400 410 mKIAA1 NIIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQ .::: : :.: ::::::...:.:::::: ::::.:::.:.:::::: :.:.: :..::. gi|472 EIIYTHNRQKCWDVHEYITGLYEELKSWVLVYWRIWGTINYLTCSRCQQVFMCTELTHCK 210 220 230 240 250 260 420 430 440 450 460 470 mKIAA1 YHSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDS :: : : . .. . :.:.::::::..:::::: . :::. :::.: : :: : gi|472 YHPVSVSYPGMGTDRGWHGAGLYPCCNQRALRFDPTGMPKGCRNRDHVVNTGD--ENCDE 270 280 290 300 310 320 480 490 500 510 520 530 mKIAA1 PSCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCD-----EKGLEYEILLEPNTPWGS . .:::: :.:.. . .:. :. :. : :. . :.:::: : : gi|472 VQ---IGVLDDLLLHRDAVCL-----SVTPPSEGAGDDPCAVERLPDCEVLLEP-TLLGP 330 340 350 360 370 540 550 560 570 580 590 mKIAA1 KTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKK-EKPKK :. . : :::.:::.::. ::.:::::::::::::::::::..:.: . .: .. gi|472 LRGDCSPFSLWKNWSLQLRQQAQQSEDEEYTTGSEVTEDEVGDEEELSKHQGEAVKKSRR 380 390 400 410 420 430 600 610 620 630 640 650 mKIAA1 FTKPPKKQLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQR .: ::. ::: : :.:.. :: ::: .::.:::::.::::.::.:.:::::::.:: gi|472 AQRPLKKHSSSPNIQLKDKAV-KSQSRDNNPFIVSMQKSKWDATRSMRYNQDAQREEDQY 440 450 460 470 480 490 660 670 680 690 700 710 mKIAA1 RMSEITGHLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSK :: :: .:: :::.:. .. : :..:: . : gi|472 RMIEIISHLTKMRFGEEEHNKMKDTKEVSMGC 500 510 520 mKIAA1 SRFGQGRPA >>gi|123122612|emb|CAM16941.1| novel protein [Mus muscul (213 aa) initn: 1389 init1: 1389 opt: 1389 Z-score: 1535.6 bits: 292.9 E(): 8e-77 Smith-Waterman score: 1389; 100.000% identity (100.000% similar) in 213 aa overlap (496-708:1-213) 470 480 490 500 510 520 mKIAA1 VLHDQGENDDSPSCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEP :::::::::::::::::::::::::::::: gi|123 AVPFLKDAVSDPGVGSCDEKGLEYEILLEP 10 20 30 530 540 550 560 570 580 mKIAA1 NTPWGSKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NTPWGSKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKK 40 50 60 70 80 90 590 600 610 620 630 640 mKIAA1 EKPKKFTKPPKKQLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 EKPKKFTKPPKKQLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQR 100 110 120 130 140 150 650 660 670 680 690 700 mKIAA1 EDDQRRMSEITGHLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 EDDQRRMSEITGHLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDK 160 170 180 190 200 210 710 mKIAA1 NQRSKSRFGQGRPA ::: gi|123 NQR >>gi|156219005|gb|EDO39893.1| predicted protein [Nematos (306 aa) initn: 1347 init1: 881 opt: 1352 Z-score: 1492.8 bits: 285.5 E(): 1.9e-74 Smith-Waterman score: 1352; 59.091% identity (85.390% similar) in 308 aa overlap (148-452:1-304) 120 130 140 150 160 170 mKIAA1 IATTRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYF ::::::::.:.::.:: ::::::: ::.:: gi|156 MVIHVCDESKNLKQDFTCPRDLLIREMRYF 10 20 30 180 190 200 210 220 230 mKIAA1 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESK---DCEIPALEPGNVISILI :::::..:::::::::::::::.::.::.::::.. :. : . : :::.::::::: gi|156 AEYLSVEAQRWEEVDISVHCDVQIFDWLMKYVKKGLMEKGKKVDEKPPKLEPNNVISILI 40 50 60 70 80 90 240 250 260 270 280 290 mKIAA1 SSEFLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKD ::.:::::.::..::..::.::.:::..:::::::: .:.:::..::.:::.:..::.:: gi|156 SSDFLKMDNLVNDCISFCHENMSAIVSTPCNMNCINDKLVTRISELFNHNELDEVKDRKD 100 110 120 130 140 150 300 310 320 330 340 350 mKIAA1 KFRSKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDR ::.:::::::::.::::. .. : .: :.::: :..:.:.:...:. : .....:. gi|156 KFKSKLFCKKIEELFDPNKTTICSPASACTMYRCSACHRLITQESQERLRCALSRMTIDH 160 170 180 190 200 210 360 370 380 390 400 410 mKIAA1 HGNIIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSH .: . . :.:: .:::.::...: :..::::::::::::.:: : : :: . : : :..: gi|156 RGRVTFSHVRDPNWDVNEYIQGLREKFKSWRDVYWRLWGSVNILYCYRCGEYFPCCELGH 220 230 240 250 260 270 420 430 440 450 460 470 mKIAA1 CQYHSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGEND :.::. . ..: ... .:.::::.:.:: :::: gi|156 CRYHTSSADFGSHKGTI----VGVYPCCQQRVLPFDPTGQ 280 290 300 480 490 500 510 520 530 mKIAA1 DSPSCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTG >>gi|123122614|emb|CAM16943.1| novel protein [Mus muscul (189 aa) initn: 1298 init1: 1298 opt: 1298 Z-score: 1436.0 bits: 274.3 E(): 2.8e-71 Smith-Waterman score: 1298; 100.000% identity (100.000% similar) in 189 aa overlap (148-336:1-189) 120 130 140 150 160 170 mKIAA1 IATTRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYF :::::::::::::::::::::::::::::: gi|123 MVIHVCDEAKSLKEDFICPRDLLISEMKYF 10 20 30 180 190 200 210 220 230 mKIAA1 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSE 40 50 60 70 80 90 240 250 260 270 280 290 mKIAA1 FLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 FLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFR 100 110 120 130 140 150 300 310 320 330 340 350 mKIAA1 SKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGN ::::::::::::::::::::::::::::::::::::::: gi|123 SKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLT 160 170 180 360 370 380 390 400 410 mKIAA1 IIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQY >>gi|26343787|dbj|BAC35550.1| unnamed protein product [M (189 aa) initn: 1297 init1: 1297 opt: 1297 Z-score: 1434.9 bits: 274.1 E(): 3.2e-71 Smith-Waterman score: 1297; 99.471% identity (100.000% similar) in 189 aa overlap (148-336:1-189) 120 130 140 150 160 170 mKIAA1 IATTRNCSSESENCTARNAGEETGESEGPNMVIHVCDEAKSLKEDFICPRDLLISEMKYF ::.::::::::::::::::::::::::::: gi|263 MVVHVCDEAKSLKEDFICPRDLLISEMKYF 10 20 30 180 190 200 210 220 230 mKIAA1 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISSE 40 50 60 70 80 90 240 250 260 270 280 290 mKIAA1 FLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKFR 100 110 120 130 140 150 300 310 320 330 340 350 mKIAA1 SKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHGN ::::::::::::::::::::::::::::::::::::::: gi|263 SKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLT 160 170 180 360 370 380 390 400 410 mKIAA1 IIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQY 719 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 02:13:05 2009 done: Mon Mar 16 02:21:02 2009 Total Scan time: 1053.200 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]