# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh03491.fasta.nr -Q ../query/mFLJ00394.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00394, 310 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920930 sequences Expectation_n fit: rho(ln(x))= 5.0894+/-0.000181; mu= 10.1972+/- 0.010 mean_var=70.7342+/-13.572, 0's: 42 Z-trim: 46 B-trim: 0 in 0/67 Lambda= 0.152496 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847530|dbj|BAD21437.1| mFLJ00394 protein [Mus ( 310) 2070 464.1 1.5e-128 gi|16741117|gb|AAH16412.1| Ubxn6 protein [Mus musc ( 389) 1538 347.2 3e-93 gi|148691763|gb|EDL23710.1| UBX domain containing ( 396) 1538 347.2 3e-93 gi|30913410|sp|Q99PL6.1|UBXN6_MOUSE RecName: Full= ( 442) 1538 347.2 3.3e-93 gi|12843710|dbj|BAB26082.1| unnamed protein produc ( 390) 1496 337.9 1.8e-90 gi|149028228|gb|EDL83666.1| similar to UBX domain ( 395) 1490 336.6 4.6e-90 gi|149028227|gb|EDL83665.1| similar to UBX domain ( 441) 1490 336.6 5e-90 gi|73987385|ref|XP_542155.2| PREDICTED: similar to ( 417) 1276 289.5 7.1e-76 gi|109896150|sp|Q2KIJ6.1|UBXN6_BOVIN RecName: Full ( 441) 1258 285.6 1.1e-74 gi|114674732|ref|XP_512287.2| PREDICTED: similar t ( 283) 1248 283.3 3.7e-74 gi|114674730|ref|XP_001138590.1| PREDICTED: UBX do ( 345) 1248 283.3 4.4e-74 gi|114674728|ref|XP_001138764.1| PREDICTED: UBX do ( 388) 1248 283.4 4.8e-74 gi|114674726|ref|XP_001138677.1| PREDICTED: UBX do ( 417) 1248 283.4 5.1e-74 gi|194212484|ref|XP_001916732.1| PREDICTED: simila ( 621) 1248 283.5 6.9e-74 gi|26349745|dbj|BAC38512.1| unnamed protein produc ( 396) 1241 281.8 1.4e-73 gi|33873602|gb|AAH07414.2| UBXN6 protein [Homo sap ( 293) 1238 281.1 1.8e-73 gi|109122978|ref|XP_001102049.1| PREDICTED: simila ( 388) 1239 281.4 1.9e-73 gi|109122976|ref|XP_001102137.1| PREDICTED: simila ( 441) 1239 281.4 2.1e-73 gi|13160494|gb|AAK13258.1|AF272894_1 UBX domain-co ( 388) 1238 281.2 2.2e-73 gi|30913412|sp|Q9BZV1.1|UBXN6_HUMAN RecName: Full= ( 441) 1238 281.2 2.4e-73 gi|90085559|dbj|BAE91520.1| unnamed protein produc ( 388) 1233 280.1 4.7e-73 gi|90076632|dbj|BAE87996.1| unnamed protein produc ( 441) 1233 280.1 5.2e-73 gi|74148256|dbj|BAE36284.1| unnamed protein produc ( 396) 1209 274.8 1.9e-71 gi|126323129|ref|XP_001365542.1| PREDICTED: simila ( 439) 1095 249.7 7.2e-64 gi|126340527|ref|XP_001362225.1| PREDICTED: simila ( 439) 1077 245.8 1.1e-62 gi|16877752|gb|AAH17113.1| UBXN6 protein [Homo sap ( 196) 1023 233.6 2.2e-59 gi|224087738|ref|XP_002194445.1| PREDICTED: hypoth ( 443) 1023 233.9 4.2e-59 gi|118103172|ref|XP_425889.2| PREDICTED: similar t ( 431) 1010 231.0 3e-58 gi|118103170|ref|XP_001232670.1| PREDICTED: simila ( 438) 1010 231.0 3e-58 gi|49522368|gb|AAH75367.1| UBX domain containing 1 ( 427) 997 228.2 2.2e-57 gi|122936392|gb|AAI30085.1| LOC100037069 protein [ ( 428) 966 221.3 2.5e-55 gi|33416455|gb|AAH55680.1| UBX domain protein 6 [D ( 437) 883 203.1 7.8e-50 gi|94732431|emb|CAK04066.1| novel protein (zgc:664 ( 437) 881 202.7 1.1e-49 gi|115530815|emb|CAL49395.1| UBX domain containing ( 194) 813 187.4 1.8e-45 gi|47216643|emb|CAG04841.1| unnamed protein produc ( 411) 760 176.0 1e-41 gi|115636696|ref|XP_001190437.1| PREDICTED: simila ( 438) 704 163.7 5.6e-38 gi|210087427|gb|EEA35804.1| hypothetical protein B ( 416) 666 155.3 1.8e-35 gi|91085807|ref|XP_974668.1| PREDICTED: similar to ( 438) 594 139.5 1.1e-30 gi|190587424|gb|EDV27466.1| hypothetical protein T ( 449) 519 123.0 1e-25 gi|156553403|ref|XP_001602388.1| PREDICTED: simila ( 437) 510 121.0 3.9e-25 gi|221125525|ref|XP_002154343.1| PREDICTED: simila ( 444) 506 120.2 7.4e-25 gi|66534585|ref|XP_393087.2| PREDICTED: similar to ( 441) 487 116.0 1.3e-23 gi|193903317|gb|EDW02184.1| GH21854 [Drosophila gr ( 549) 487 116.0 1.6e-23 gi|193910264|gb|EDW09131.1| GI20356 [Drosophila mo ( 441) 485 115.5 1.8e-23 gi|212513051|gb|EEB15701.1| UBX domain-containing ( 446) 481 114.7 3.3e-23 gi|194109772|gb|EDW31815.1| GL11324 [Drosophila pe ( 447) 478 114.0 5.3e-23 gi|198135727|gb|EAL24996.2| GA18903 [Drosophila ps ( 543) 474 113.2 1.1e-22 gi|194145098|gb|EDW61494.1| GJ22082 [Drosophila vi ( 443) 466 111.4 3.3e-22 gi|17862556|gb|AAL39755.1| LD37137p [Drosophila me ( 441) 465 111.1 3.8e-22 gi|194177986|gb|EDW91597.1| GE13896 [Drosophila ya ( 443) 465 111.1 3.8e-22 >>gi|47847530|dbj|BAD21437.1| mFLJ00394 protein [Mus mus (310 aa) initn: 2070 init1: 2070 opt: 2070 Z-score: 2464.4 bits: 464.1 E(): 1.5e-128 Smith-Waterman score: 2070; 100.000% identity (100.000% similar) in 310 aa overlap (1-310:1-310) 10 20 30 40 50 60 mFLJ00 FEYFWEDTLQIYPTNADMRLAWCSLSNHKAIMGDVIPRTTHQLLGQWELLGFNLSSAGSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 FEYFWEDTLQIYPTNADMRLAWCSLSNHKAIMGDVIPRTTHQLLGQWELLGFNLSSAGSW 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 PCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQEGQEEFYVLGEDARAQPQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 PCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQEGQEEFYVLGEDARAQPQN 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 LARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFSLTAEEVKREQRLRTEAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 LARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFSLTAEEVKREQRLRTEAVE 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 RLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFYAREKLSALFRFVREALQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 RLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFYAREKLSALFRFVREALQN 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 DWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASVLEDIRAAGAEPAKSVLRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 DWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASVLEDIRAAGAEPAKSVLRP 250 260 270 280 290 300 310 mFLJ00 ELLAAIEQLS :::::::::: gi|478 ELLAAIEQLS 310 >>gi|16741117|gb|AAH16412.1| Ubxn6 protein [Mus musculus (389 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1830.5 bits: 347.2 E(): 3e-93 Smith-Waterman score: 1538; 100.000% identity (100.000% similar) in 238 aa overlap (73-310:152-389) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::::::::::::::::::::::: gi|167 VDTIAKYLDNIHLHPEEEKYQKIKLQNKVFQERINCLEGSHEFFEAIGFKKVTLPVPDQE 130 140 150 160 170 180 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS 190 200 210 220 230 240 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY 250 260 270 280 290 300 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV 310 320 330 340 350 360 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS :::::::::::::::::::::::::::: gi|167 LEDIRAAGAEPAKSVLRPELLAAIEQLS 370 380 >>gi|148691763|gb|EDL23710.1| UBX domain containing 1, i (396 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1830.4 bits: 347.2 E(): 3e-93 Smith-Waterman score: 1538; 100.000% identity (100.000% similar) in 238 aa overlap (73-310:159-396) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::::::::::::::::::::::: gi|148 VDTIAKYLDNIHLHPEEEKYQKIKLQNKVFQERINCLEGSHEFFEAIGFKKVTLPVPDQE 130 140 150 160 170 180 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS 190 200 210 220 230 240 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY 250 260 270 280 290 300 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV 310 320 330 340 350 360 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS :::::::::::::::::::::::::::: gi|148 LEDIRAAGAEPAKSVLRPELLAAIEQLS 370 380 390 >>gi|30913410|sp|Q99PL6.1|UBXN6_MOUSE RecName: Full=UBX (442 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1829.7 bits: 347.2 E(): 3.3e-93 Smith-Waterman score: 1538; 100.000% identity (100.000% similar) in 238 aa overlap (73-310:205-442) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::::::::::::::::::::::: gi|309 VDTIAKYLDNIHLHPEEEKYQKIKLQNKVFQERINCLEGSHEFFEAIGFKKVTLPVPDQE 180 190 200 210 220 230 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|309 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS 240 250 260 270 280 290 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|309 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY 300 310 320 330 340 350 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|309 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV 360 370 380 390 400 410 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS :::::::::::::::::::::::::::: gi|309 LEDIRAAGAEPAKSVLRPELLAAIEQLS 420 430 440 >>gi|12843710|dbj|BAB26082.1| unnamed protein product [M (390 aa) initn: 1496 init1: 1496 opt: 1496 Z-score: 1780.5 bits: 337.9 E(): 1.8e-90 Smith-Waterman score: 1496; 99.567% identity (100.000% similar) in 231 aa overlap (73-303:152-382) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::::::::::::::::::::::: gi|128 VDTIAKYLDNIHLHPEEEKYQKIKLQNKVFQERINCLEGSHEFFEAIGFKKVTLPVPDQE 130 140 150 160 170 180 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS 190 200 210 220 230 240 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY 250 260 270 280 290 300 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|128 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGVVPSALLTFSWDASV 310 320 330 340 350 360 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS ::::::::::::::::::::: gi|128 LEDIRAAGAEPAKSVLRPELLQPSSNSPE 370 380 390 >>gi|149028228|gb|EDL83666.1| similar to UBX domain cont (395 aa) initn: 1283 init1: 1283 opt: 1490 Z-score: 1773.3 bits: 336.6 E(): 4.6e-90 Smith-Waterman score: 1490; 97.479% identity (98.739% similar) in 238 aa overlap (73-310:159-395) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::::::::::::::::::::::: gi|149 VDTIAKYLDNIHLHPEEEKYQKIKLQNKVFQERINCLEGSHEFFEAIGFKKVTLPVPDQE 130 140 150 160 170 180 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS ::: ::::::::::::::: ::::::: :::::::::::::::::::::::::::::::: gi|149 GQE-FYVLGEDARAQPQNLERHKQQLLGAEPVRATLDRQLRVFRPSALASHFELPSDFFS 190 200 210 220 230 240 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|149 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALLRVRLPDGCLLQGTFY 250 260 270 280 290 300 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV ::::::.::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AREKLSVLFQFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV 310 320 330 340 350 360 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS :::::::::::::::::::::::::::: gi|149 LEDIRAAGAEPAKSVLRPELLAAIEQLS 370 380 390 >>gi|149028227|gb|EDL83665.1| similar to UBX domain cont (441 aa) initn: 1283 init1: 1283 opt: 1490 Z-score: 1772.7 bits: 336.6 E(): 5e-90 Smith-Waterman score: 1490; 97.479% identity (98.739% similar) in 238 aa overlap (73-310:205-441) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::::::::::::::::::::::: gi|149 VDTIAKYLDNIHLHPEEEKYQKIKLQNKVFQERINCLEGSHEFFEAIGFKKVTLPVPDQE 180 190 200 210 220 230 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS ::: ::::::::::::::: ::::::: :::::::::::::::::::::::::::::::: gi|149 GQE-FYVLGEDARAQPQNLERHKQQLLGAEPVRATLDRQLRVFRPSALASHFELPSDFFS 240 250 260 270 280 290 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|149 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALLRVRLPDGCLLQGTFY 300 310 320 330 340 350 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV ::::::.::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AREKLSVLFQFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV 360 370 380 390 400 410 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS :::::::::::::::::::::::::::: gi|149 LEDIRAAGAEPAKSVLRPELLAAIEQLS 420 430 440 >>gi|73987385|ref|XP_542155.2| PREDICTED: similar to UBX (417 aa) initn: 1276 init1: 1276 opt: 1276 Z-score: 1518.5 bits: 289.5 E(): 7.1e-76 Smith-Waterman score: 1276; 80.252% identity (94.118% similar) in 238 aa overlap (73-310:180-417) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::.:::::::::.:. ::::::: gi|739 VDTIAKYLDNICLHPEEEKYRKIKLQNKVFQERINCLEGTHEFFEAIGFQKALLPVPDQE 150 160 170 180 190 200 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS : ::::::.: : :.::.: :::.::: :::::::: :: :::::: .::.:.::.:::. gi|739 GPEEFYVLSEAAVAEPQSLQRHKDQLLVAEPVRATLARQRRVFRPSPMASQFDLPGDFFN 210 220 230 240 250 260 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY :::::.:::::::.::::::: ::::::::.:::::::::::.:.::::::::::::::: gi|739 LTAEEIKREQRLRSEAVERLSVLRTKAMREREEQRELRKYTYTLLRVRLPDGCLLQGTFY 270 280 290 300 310 320 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV :::...::. :::::::.:::::.: ::::::: :...::.:::::::::::::::::.: gi|739 ARERVGALYAFVREALQSDWLPFDLLASGGQKLSEEDSLAFNECGLVPSALLTFSWDAAV 330 340 350 360 370 380 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS :.::::::::: .:.:.::::::::.:: gi|739 LDDIRAAGAEPNSSILKPELLAAIEKLS 390 400 410 >>gi|109896150|sp|Q2KIJ6.1|UBXN6_BOVIN RecName: Full=UBX (441 aa) initn: 1258 init1: 1258 opt: 1258 Z-score: 1496.8 bits: 285.6 E(): 1.1e-74 Smith-Waterman score: 1258; 79.747% identity (93.249% similar) in 237 aa overlap (73-309:205-441) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE ::::.::::.:::::::::.:: ::.:::: gi|109 VDTIAKYLDNIHLHPEEEKYRKIKVQNKVFQERIHCLEGTHEFFEAIGFQKVLLPIPDQE 180 190 200 210 220 230 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS : ::::::.: : ::::.: ::.:::.:::::::: :: ::::::.:::.:.::.:::. gi|109 GPEEFYVLSEAALAQPQSLEWHKEQLLSAEPVRATLARQRRVFRPSTLASQFDLPADFFN 240 250 260 270 280 290 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY :::::.:::::::.::::::: ::::::::.:::::.:::::.:.::::::::::::::: gi|109 LTAEEIKREQRLRSEAVERLSVLRTKAMREREEQREMRKYTYTLLRVRLPDGCLLQGTFY 300 310 320 330 340 350 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV :::...::. ::::::::::::::: ::::::: :.: ::.:::::::::::::: ::.: gi|109 ARERVAALYGFVREALQNDWLPFELLASGGQKLSEDENLAFNECGLVPSALLTFSLDAAV 360 370 380 390 400 410 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS ::::::::..: :.:.::::.:::.: gi|109 LEDIRAAGTQPDTSILKPELLSAIEKL 420 430 440 >>gi|114674732|ref|XP_512287.2| PREDICTED: similar to UB (283 aa) initn: 1189 init1: 1189 opt: 1248 Z-score: 1487.6 bits: 283.3 E(): 3.7e-74 Smith-Waterman score: 1248; 80.252% identity (91.597% similar) in 238 aa overlap (73-310:47-283) 50 60 70 80 90 100 mFLJ00 LLGQWELLGFNLSSAGSWPCNLGDLCVPHPQERINCLEGSHEFFEAIGFKKVTLPVPDQE :::::::::.:::::::::.:: ::: ::: gi|114 VDTIAKYLDNIHLHPEEEKYRKIKLQNKVFQERINCLEGTHEFFEAIGFQKVLLPVQDQE 20 30 40 50 60 70 110 120 130 140 150 160 mFLJ00 GQEEFYVLGEDARAQPQNLARHKQQLLDAEPVRATLDRQLRVFRPSALASHFELPSDFFS ::::::.: . ::::.: :::.::: :::::: :::: :::.:: :::.::::.:::. gi|114 DPEEFYVLSETTLAQPQSLERHKEQLLAAEPVRAKLDRQRRVFQPSPLASQFELPGDFFN 80 90 100 110 120 130 170 180 190 200 210 220 mFLJ00 LTAEEVKREQRLRTEAVERLSSLRTKAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFY :::::.:::::::.::::::: ::::::::::::: ::::.:.:.::::::::::::::: gi|114 LTAEEIKREQRLRSEAVERLSVLRTKAMREKEEQRGLRKYNYTLLRVRLPDGCLLQGTFY 140 150 160 170 180 190 230 240 250 260 270 280 mFLJ00 AREKLSALFRFVREALQNDWLPFELRASGGQKLEENEALALNECGLVPSALLTFSWDASV :::.:.:.. :::::::.::::::: ::::::: :.: ::::::::::::::::::: .: gi|114 ARERLGAVYGFVREALQSDWLPFELLASGGQKLSEDENLALNECGLVPSALLTFSWDMAV 200 210 220 230 240 250 290 300 310 mFLJ00 LEDIRAAGAEPAKSVLRPELLAAIEQLS ::::.:::::: :.:.::::.:::.:: gi|114 LEDIKAAGAEP-DSILKPELLSAIEKLS 260 270 280 310 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 09:46:29 2009 done: Fri Mar 13 09:52:17 2009 Total Scan time: 804.570 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]