Comparison of KIAA cDNA sequences between mouse and human (FLJ00394)

<< Original sequence data >>

mouse  mFLJ00394 (mbh03491)     length:   3477 bp
human     (sj05987)     length:   4600 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      357       262       95      26.61
  Total:      357       262       95      26.61

amino acid

  CDS1 :      121        82       39      32.23
  Total:      121        82       39      32.23
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse  2543 -  2896   2240 -  3172    102 -   219
         human  2886 -  3326   2775 -  3491     38 -   184
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
           102 E  G  Q  E  E  F  Y  V  L  G  E  D  A  R  A  Q  P  118
mbh03491  2543 GAGGGCCAGGAGGAGTTCTACGTTCTGGGTGAGGATGCACGGGCGCAGCC 2592
               |||| ||  |||||||||||||| ||| | |||    |   ||| |||||
sj05987   2886 GAGGACCCCGAGGAGTTCTACGTGCTGAGCGAGACCACCTTGGCCCAGCC 2935
            38 E  D  P  E  E  F  Y  V  L  S  E  T  T  L  A  Q  P  54

            51 ----+----*----+----*----+----*----+----*----+----* 100
           119  Q  N  L  A  R  H  K  Q  Q  L  L  D  A  E  P  V  R 135
mbh03491  2593 GCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGC 2642
                |||| ||||| | |||||||| | |||||| ||| ||  ||||| ||||
sj05987   2936 CCAGAGCCTGGAGAGGCACAAGGAACAGCTGCTGGCTGGGGAGCCCGTGC 2985
            55  Q  S  L  E  R  H  K  E  Q  L  L  A  G  E  P  V  R 71

           101 ----+----*----+----*----+----*----+----*----+----* 150
           136   A  T  L  D  R  Q  L  R  V  F  R  P  S  A  L  A   151
mbh03491  2643 GGGCCACTCTGGATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCC 2692
               | ||||  |||||  |||||| ||| |||||||  |||||| | ||||||
sj05987   2986 GCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGCC 3035
            72   A  K  L  D  R  Q  R  R  V  F  Q  P  S  P  L  A   87

           151 ----+----*----+----*----+----*----+----*----+----* 200
           152 S  H  F  E  L  P  S  D  F  F  S  .  .  .  .  .  .  162
mbh03491  2693 TCACATTTTGAACTCCCCTCAGATTTCTTCAGC................. 2725
               || || || ||||| ||    || ||||||| |                 
sj05987   3036 TCGCAGTTCGAACTGCCTGGGGACTTCTTCAACCCTCACAGCAGAGGAGA 3085
            88 S  Q  F  E  L  P  G  D  F  F  N  P  H  S  R  G  D  104

           201 ----+----*----+----*----+----*----+----*----+----* 250
           163  .  .  .  .  .  .  .  .  .  L  T  A  E  E  .  .  . 167
mbh03491  2726 ............................CTTACAGCTGAGGAG....... 2740
                                           || ||  | | ||||       
sj05987   3086 TCAAGCGGGAGCAGAGGCTCAGGTGGGCCTGACGTCCGCGGAGCAGAGTG 3135
           105  Q  A  G  A  E  A  Q  V  G  L  T  S  A  E  Q  S  G 121

           251 ----+----*----+----*----+----*----+----*----+----* 300
           168   V  K  R  E  Q  R  L  .  .  .  .  .  .  .  .  .   174
mbh03491  2741 ..GTGAAGCGGGAGCAAAGGCTC........................... 2761
                 | |  |||||    |||   |                           
sj05987   3136 GGGCGGGGCGGGGTGGAAGAACCCCGGCCAGCCCTCGTGACCTGGCCCGC 3185
           122   A  G  R  G  G  R  T  P  A  S  P  R  D  L  A  R   137

           301 ----+----*----+----*----+----*----+----*----+----* 350
           175 .  .  R  T  E  A  V  E  R  L  S  S  L  R  T  K  A  189
mbh03491  2762 ......AGGACAGAGGCGGTGGAGCGACTGAGCTCACTCAGGACCAAAGC 2805
                     ||| | |||||||||||||| ||||||   ||  ||||||| ||
sj05987   3186 GTGTGCAGGTCCGAGGCGGTGGAGCGGCTGAGCGTGCTGCGGACCAAGGC 3235
           138 V  C  R  S  E  A  V  E  R  L  S  V  L  R  T  K  A  154

           351 ----+----*----+----*----+----*----+----*----+----* 400
           190  M  R  E  K  E  E  Q  R  E  L  R  K  Y  T  Y  A  L 206
mbh03491  2806 CATGCGGGAGAAAGAGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCC 2855
               ||||||  |||| ||||| || |||| ||| ||||| || | |||  | |
sj05987   3236 CATGCGCCAGAAGGAGGACCACCGGGGGCTGCGCAACTACAACTACACGC 3285
           155  M  R  Q  K  E  D  H  R  G  L  R  N  Y  N  Y  T  L 171

           401 ----+----*----+----*----+----*----+----*- 441
           207   V  R  V  R  L  P  D  G  C  L  L  Q  G   219
mbh03491  2856 TTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTGCAAGGG 2896
               |  ||||||||| ||| || |||||||| || ||||| || 
sj05987   3286 TGCTGCGCGTGCCCCTCCCCGATGGCTGCCTCCTGCAGGGT 3326
           172   L  R  V  P  L  P  D  G  C  L  L  Q  G   184